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Showing posts with label Cavefish. Show all posts
Showing posts with label Cavefish. Show all posts

Thursday, November 7, 2024

[Ichthyology • 2024] Karstsinnectes daxinensis • Evolutionary History of Chinese Karst Loaches (Nemacheilidae: Karstsinnectes): New insights from Mitochondrial-based Genomes and Description of A New Species from Guangxi, China


  Karstsinnectes daxinensis Luo, Zhou & Zhou,

in T. Luo, F.-W. Luo, Lan, M.-Y. Xiao, J.-J. Zhou, Liao, N. Xiao et J. Zhou, 2024. 
Daxin Chinese Karst Loach | 大新中华喀鳅  ||  DOI: doi.org/10.3897/zse.100.133964

 Abstract
The genus Karstsinnectes of blind fishes known as karst loaches from China was established in 2023 during a revision of the genus Oreonectes (Nemacheilidae). Six species are recorded in this study and some taxonomic progress has been made; however, the lack of genetic data for some species (e.g., K. anophthalmus) may have weakened our current understanding of Karstsinnectes. This study reassessed the phylogeny and evolutionary history of Karstsinnectes by integrating a combination of previously published and newly sequenced mitochondrial genomic data. A phylogenetic tree was developed that was able to divide Karstsinnectes into two clades corresponding to drainages and clarify the phylogenetic position of K. anophthalmus. Divergence times show that Karstsinnectes originated at the Oligocene/Miocene boundary (~22.37 Mya), with the most recent common ancestor occurring in the early Miocene (~18.87 Mya) and interspecific divergence occurring in the late Miocene. Ancestral area reconstruction suggests that the most recent common ancestor of Karstsinnectes most likely inhabited the Hongshui River basin and dispersed into the Zuojiang-Yujiang, Beipanjiang, and Youjiang river basins during the early Miocene (~18.87 Mya), middle Miocene (~12.78 Mya), and late Miocene (~6.71 Mya), respectively. The dispersal under the influence of orogenesis and a monsoon climate drove the speciation and diverse distribution of Karstsinnectes. Such findings are important for conservation considering that Karstsinnectes strictly inhabits deep caves. Additionally, the taxonomic status of the distributed Karstsinnectes population in Leiping Town, Daxin County, Guangxi, China was revised by combining genetic and morphological differences to describe this population as a new species, Karstsinnectes daxinensis Luo, Zhou & Zhou, sp. nov. The definition of the phylogenetic position of K. anophthalmus emphasizes the importance of using type locality material for the identification of cryptic species.

Key Words: Biogeography, blind fishes, Karstsinnectes anophthalmus, phylogeny, taxonomy


Lateral, dorsal, ventral views of Karstsinnectes daxinensis sp. nov. In living.

 Karstsinnectes daxinensis Luo, Zhou & Zhou, sp. nov.
 
Chresonymy: Oreonectes anophthalmus: Wang, 2022 (Leiping Town, Daxin County, Guangxi, China). Karstsinnectes anophthalmus: Luo et al. 2023, 2024; Yu et al. 2023; Ge et al. 2024; Zhao et al. 2024 (Leiping Town, Daxin County, Guangxi, China).
 
Diagnosis: Karstsinnectes daxinensis sp. nov. can be distinguished from all of the other congeners by the following combination of characters: (1) body naked and without pigmentation; (2) eyes absent; (3) dorsal-fin rays iii-7, pectoral-fin rays i-10–11, pelvic-fin rays i-5, anal-fin rays iii-5, caudal fin truncated with 13–14 branched caudal-fin rays; (4) pelvic fins slightly long, length 9.5–13.2% of SL, tip reaching the anus; (5) high and wide head (depth 6.3–9.8% of SL; wide 10.0–14.8% of SL), narrow mouth (width 6.2–7.9% of SL), long inrostral barbel length (length 7.2–12.7% of SL), and long maxillary barbel length (length 11.3–13.1% of SL).

Etymology: The specific epithet “daxinensis” refers to the type locality of the new species: Leiping Town, Daxin County, Chongzuo City, Guangxi, China. We propose the English common name “Daxin Chinese Karst Loach” and Chinese common name “Dà Xīn Zhōng Huá Kā Qiū (大新中华喀鳅).”


Tao Luo, Fang-Wei Luo, Chang-Ting Lan, Ming-Yuan Xiao, Jia-Jun Zhou, Mei Liao, Ning Xiao and Jiang Zhou. 2024.  Evolutionary History of Chinese Karst Loaches (Nemacheilidae, Karstsinnectes): new insights from Mitochondrial-based Genomes and Description of A New Species from Guangxi, China. Zoosystematics and Evolution. 100(4): 1473-1486. DOI: doi.org/10.3897/zse.100.133964

Friday, October 4, 2024

[Ichthyology • 2024] Sinocyclocheilus xiejiahuai • A New Cave Fish (Cypriniformes, Cyprinidae) with extremely small population size from western Guizhou, China


  Sinocyclocheilus xiejiahuai Luo, Fan, Xiao & Zhou, 

in Fan, M. Wang, J.-J. Wang, Luo, J.-J. Zhou, Xiao et J. Zhou. 2024. 
Xie’s Golden-lined Fish | 谢氏金线鲃  ||  DOI: 10.3897/zookeys.1214.127629

Abstract
This study describes a new species, Sinocyclocheilus xiejiahuai sp. nov., discovered within a cave located in Hongguo Town, Panzhou City, Guizhou Province, southwestern China, with the type locality in the Nanpanjiang River basin. Phylogenetic trees reconstructed based on mitochondrial genes show that the new species represents an independent evolutionary lineage with large genetic differences, 1.9%–13.8% in mitochondrial Cyt b, from congeners. Morphologically, this species can be differentiated from the 79 species currently classified under the genus Sinocyclocheilus by several characteristics: absence of horn-like structures and indistinct elevation at the head-dorsal junction, absence of irregular black markings on the body lateral and scaleless, eyes large, eye diameter 13% of head length, dorsal-fin rays, iii, 6½, last unbranched ray strong, with serrations along posterior margin, pectoral-fin rays, i, 13, anal-fin rays, iii, 5, pelvic-fin rays, i, 7, lateral line pores 74, gill rakers well developed, nine on first gill arch, pectoral fins short, tip not reaching to pelvic-fin origin. The number of Sinocyclocheilus species has been increased from 79 to 80 since the description of this new species.

Key words: Cavefish, new species, morphology, phylogeny, taxonomy

Lateral view of adult holotype GZNU20230304001 of Sinocyclocheilus xiejiahuai sp. nov. in preservative
A left side B right side.

 Sinocyclocheilus xiejiahuai Luo, Fan, Xiao & Zhou, sp. nov.

Diagnosis: Sinocyclocheilus xiejiahuai sp. nov. can be distinguished from all other congeners by the following combination of characters: (1) absence of horn-like structures and indistinct elevation at the head-dorsal junction; (2) absence of irregular black markings on the body lateral and scaleless; (3) eyes large, eye diameter 13% of head length; (4) dorsal-fin rays, iii, 6½, last unbranched ray strong, with serrations along posterior margin; (5) pectoral-fin rays, i, 13; (6) anal-fin rays, iii, 5; (7) pelvic-fin rays, i, 7; (8) lateral line pores 74; (9) gill rakers well developed, nine on first gill arch; (10) pectoral fins short, tip not reaching to pelvic-fin origin (Table 5).

Etymology: The specific name xiejiahuai is in honor of Professor Jia-Hua Xie (谢家骅), for his contribution to zoological research in China. Before retiring from Guizhou Normal University, he described S. angustiporus, the first species distributed in Guizhou within the S. tingi species group, and his work has been an important contribution to the study of zoology in Guizhou, especially the conservation of critically endangered species. We propose the common English name “Xie’s Golden-lined Fish” and the Chinese name “Xiè Shì Jīn Xiàn Bā (谢氏金线鲃).”



 Cui Fan, Man Wang, Jia-Jia Wang, Tao Luo, Jia-Jun Zhou, Ning Xiao and Jiang Zhou. 2024. Sinocyclocheilus xiejiahuai (Cypriniformes, Cyprinidae), A New Cave Fish with extremely small population size from western Guizhou, China. ZooKeys. 1214: 119-141. DOI: doi.org/10.3897/zookeys.1214.127629

Sunday, May 19, 2024

[Ichthyology • 2024] Sinocyclocheilus guiyang • A New troglobitic Sinocyclocheilus species (Cypriniformes: Cyprinidae) from the upper Yangtze River Basin in Guizhou, South China


Sinocyclocheilus guiyang
 Shao, Cheng, Lu, Zhou & Zeng, 2024

贵阳金线鲃 | Guiyang Golden-line Barbel  ||  DOI: 10.3897/zse.100.119520

Abstract
Sinocyclocheilus guiyang, a new troglobitic species from a subterranean tributary of the upper Yangtze Basin in Guiyang City, Guizhou Province, China is described in the present study. The new species is distinguishable from its congeneric species by a combination of the following characters: tip of maxillary barbel reaching to posterior edge of orbit; forehead horn absent; eye absent (or highly reduced) and tip of pectoral fins not significantly extending beyond the base of the pelvic fin. Molecular evidence, based on the mitochondrial cytochrome b (cytb) gene, further supports the validity of the species and also reveals its close relationship with S. cyphotergous, S. multipunctatus, S. punctatus and S. sanxiaensis. In addition, the new species faces a high risk of extinction, underscoring the urgency for habitat protection measures within its limited range.

Key Words: cavefish, conservation, morphology, phylogenetic analysis, Yangtze River



Sinocyclocheilus guiyang, IHB 202012250001, holotype, 124.0 mm SL; China: Guizhou Province: Guiyang City: Qingzhen County: Yangtze River Basin.
 A. Lateral view; B. Lateral, dorsal and ventral view of head; C. Micro-CT graph and reconstructed pharyngeal dentition; D. Live photo. Scale bar: 1 cm.

Intraspecific morphological variations of Sinocyclocheilus guiyang.
 A. Individual with no eyes; B. Individual with highly reduced eyes, partially covered with skin; C. Individual with dorsal pigment; D. Individual without pigment. Note that individuals of both colouration types share the presence of dark stripes on the dorsal-posterior part of the head and a gold stripe along the mid-line from the nape to the dorsal-fin origin.

 Sinocyclocheilus guiyang sp. nov.
 
Diagnosis: Sinocyclocheilus guiyang is distinguishable from all other congeners by a combination of the following characters: tip of maxillary barbel not reaching to posterior edge of preoperculum, horn-like structure in forehead absent, eye absent or highly reduced, pectoral fin not significantly extending beyond base of pelvic fin. The major diagnostic characters for S. guiyang and related species are summarised in Table 3.
...

Etymology: The location of the subterranean stream where this new species was first collected: Guiyang City, the capital of Guizhou Province, is directly utilised as a specific epithet. The common name proposed for the new species is ‘贵阳金线鲃’ (Guiyang Golden-line Barbel).

Habitat of Sinocyclocheilus guiyang.
 A. The pool of a subterranean stream where S. guiyang was collected; B. S. guiyang in situ.


 Wei-Han Shao, Guang-Yuan Cheng, Xiao-Long Lu, Jia-Jun Zhou and Zhi-Xuan Zeng. 2024. Description of A New troglobitic Sinocyclocheilus (Pisces, Cyprinidae) species from the upper Yangtze River Basin in Guizhou, South China. Zoosystematics and Evolution. 100(2): 515-529. DOI: 10.3897/zse.100.119520 


Friday, May 3, 2024

[Ichthyology • 2024] Karstsinnectes cehengensis • A New Species of Cave Fish (Cypriniformes: Nemacheilidae) from Guizhou, China


 Karstsinnectes cehengensis Luo, Zhao & Zhou, 

in Zhao, Lan, Luo, Yu, J. Zhou, Xiao et J. Zhou, 2024.
册 亨中华喀鳅  ||  www.zootax.com.cn/EN/10.11865/zs.2024204

Abstract
Four species of the genus Karstsinnectes, which live in dark, low-energy groundwater ecosystems, are currently recorded, mainly distributed in the upstream of the Pearl River, the Youjiang River and the Hongshui River. Completing biodiversity surveys is particularly difficult due to the particular cave habitats inhabited by these species. In this work, we describe a new cave fish of the genus Karstsinnectes, namely K. cehengensis Luo, Zhao & Zhou, sp. nov., collected from the Beipanjiang River, the upstream of the Hongshui River. Genetically, the four individuals of the new species form a phylogenetically separate lineage, as the sister clade of K. acridorsalis, with a 9.4–9.5% genetic difference in mitochondrial Cyt b. Morphologically, the new species can be distinguished from its congeners by a combination of the following morphological characteristics: body naked, without body color; eyes reduced, diameter 1.4–3.8% of head length; anterior and posterior nostrils adjacent, anterior nostril not elongated to a barbel-like tip; lateral line incomplete; caudal fin forked; dorsal-fin rays iii-7, pectoral-fin rays i-11–12, pelvic-fin rays i-7, anal-fin rays iii-5, with 14 branched caudal-fin rays. The discovery of this new species represents the northernmost distribution of species within the genus Karstsinnectes and the first record from Guizhou Province. All currently known species of this genus inhabited in caves, making them ideal organisms for studying historical river connectivity and cave formation process.

Key words: Diversity, karst cave, morphology, phylogeny, Karstsinnectes

 Karstsinnectes cehengensis Luo, Zhao & Zhou, sp. nov. (A–B) and
K. anophthalmus (C) in life.
A from holotype GZNU2023 0106002.
A, C were photographed by Tao Luo, B by Jiajun Zhou.
 
Karstsinnectes cehengensis Luo, Zhao & Zhou, sp. nov.  

Diagnosis. The new species can be distinguished from all other congeners by the following combination of characters: (1) body naked, without body color; (2) eyes reduced, diameter 1.4–3.8% of head length; (3) anterior and posterior nostrils adjacent, anterior nostril not elongated to a barbel-like tip; (4) lateral line incomplete; (5) caudal fin forked;(6) dorsal-fin rays iii-7, pectoral-fin rays i-11–12, pelvic-fin rays i-7, anal-fin rays iii-5, with 14 branched caudal-fin rays. 

Etymology. The specific epithet “cehengensis” is in reference to the type locality of the new species, Ceheng County. We propose the common English name “Ceheng Chinese Karst Loach” and Chinese name “Cè Hēng Zhōng Huá Kā qiū (册 亨中华喀鳅)”. 
 

Xinrui Zhao, Changting Lan, Tao Luo, Jing Yu, Jiajun Zhou, Ning Xiao and Jiang Zhou. 2024. Karstsinnectes cehengensis (Cypriniformes: Nemacheilidae), A New Species of Cave Fish from Guizhou, China. Zoological Systematics. 49(2); 101-115. DOI: 10.11865/zs.2024204 

[Ichthyology • 2023] Troglonectes canlinensis • A New Troglomorphic Loach (Cypriniformes: Nemacheilidae) from Guangxi, China


Troglonectes canlinensis
 Li, Ge, Bao, Du, Luo et Zou, 2023


Abstract
A new species of the genus Troglonectes is described based on specimens from a karst cave in Andong Town, Xincheng County, Liuzhou City, Guangxi, China. Troglonectes canlinensis sp. nov. can be distinguished from its congener species by the following combination of characteristics: eye degenerated into a black spot; whole body covered by scales, except for the head, throat, and abdomen; incomplete lateral line; forked caudal fin; 8–10 gill rakers on the first gill arch; 13–14 branched caudal fin rays; 8–9 branched dorsal fin rays; 5–6 anal fin rays; 9–10 pectoral fin rays; upper adipose keel depth mostly 1/2 of the caudal peduncle depth; and caudal fin forked.

Keywords: taxonomy; complete mitochondrial gene; cave loach; Hongshuihe river

  Preserved and living photos of Troglonectes canlinensis sp. nov.
 Holotype KIZ-GXNU202210, (A) lateral view; (B) dorsal view; (C) ventral view; (D) living photo. 
Scale = 1 cm.

Troglonectes canlinensis sp. nov. 

Diagnosis. Troglonectes canlinensis sp. nov., T. duanensis, T. lingyunensis, T. macrolepis, T. hechiensis, and T. retrodorsalis share their whole trunk being scaled, except for the head and area between the pectoral fins and pelvic fins; other species of Troglonectes have scaleless bodies or bodies scaled after the dorsal fin origin in Tr. furcocaudalis. However, the new species can be distinguished from T. duanensis by the incomplete lateral line (vs. absent), from T. lingyunensis and T. macrolepis by the eye being present (vs. eye reduced to black pigment), from T. hechiensis by the 8–10 inner-gill rakers on first gill arch (vs. 14), and from T. retrodorsalis by the tip of the anterior nostril being elongated to barbel-like and the nostril barbel length being nearly twice the nostril tube length (vs. nostril barbel length being less than 1/2 of the tube length).

Etymology. The specific name “canlinensis” is derived from the pinyin of “can” and “lin”, which refer to resplendence and forest, respectively, with “canlin” symbolizing health and tenacious vitality. Troglonectes canlinensis sp. nov. is valuable and rare and requires strong vitality to maintain a viable population. We suggest the common Chinese name “灿 (càn) 林 (lín) 洞 (dòng) 鳅 (qīu)”.

 
Shu-Jing Li, Jia-Kai Ge, Chun-Yan Bao, Li-Na Du, Fu-Guang Luo and Tong-Xiang Zou. 2023. Troglonectes canlinensis sp. nov. (Teleostei: Nemacheilidae), A New Troglomorphic Loach from Guangxi, China. Animals. 13(10). DOI: 10.3390/ani13101712
 (This article belongs to the Special Issue Aquatic Fauna Biodiversity and Conservation)

 Simple Summary: Troglonectes is a small-body loach endemic to the Guangxi and Guizhou provinces of China, showing a particular affinity for cave areas. Twenty species were recorded in this genus, including one new species. The new species, Tr. canlinensis, can be distinguished from other congenetic species by their morphological characteristics and molecular evidence. In the genus of Troglonectes, the eye, lateral line and scale present or absent, the number of branched pectoral fin rays, caudal fin rays and anal fin rays, and the depth of the upper adipose keel on the caudal peduncle are important identifying characteristics.

Tuesday, April 30, 2024

[Ichthyology • 2023] Karstsinnectes gen. nov. • Phylogenetic Relationships of Nemacheilidae Cavefish (Heminoemacheilus, Oreonectes, Yunnanilus, Paranemachilus, and Troglonectes) revealed by Analysis of Mitochondrial Genome and Seven Nuclear Genes

 

(Oreonectes I) = Karstsinnectes Zhou, Luo, Wang, Zhou & Xiao gen. nov.,

in Luo, Yang, Wu, Wang, J.-J. Zhou, Deng, Xiao et J. Zhou, 2023.

Cave loaches within the family Nemacheilidae are among the most diverse group of cavefish in southwestern China. Although certain species have been included in previous phylogenetic studies, the intergeneric and interspecific relationships of Chinese cave loaches in Nemacheilidae remain poorly investigated due to insufficient sampling. In this study, a total of 45 samples from 37 recognized species and two unidentified species of cave loaches were collected, accounting for 87.5% of the eight recognized genera of cave loaches within the family Nemacheilidae in China. The complete mitochondrial genome (mitogenome) and seven nuclear genes were sequenced, and the phylogenetic tree of Chinese cave loaches was reconstructed. Both Bayesian inference and maximum-likelihood analyses resolved the phylogenetic relationships at the generic and species levels, suggesting the effectiveness of this multilocus marker system in determining phylogenetic relationships in Chinese cave loaches. Phylogenetic analysis not only confirmed previous taxonomic hypotheses based on morphological data but also provided new insights into the relationships of many cave loaches at the genus and species levels as well as suggestions for the current taxonomy of cave loaches within the family Nemacheilidae.

The karst regions of southwestern China are considered the center of Chinese cavefish biodiversity, boasting the most concentrated distribution of cavefish in the world. However, many cavefish species in the region remain poorly known and highly threatened (IUCN, 2022). Nemacheilidae, which contains approximately 22 genera and 269 species, constitutes one of the largest and most diverse families, second only to Cyprinidae in terms of diversity (Zhang et al., 2020). These cave loaches, which include both stygophilic and stygobitic species, are restricted in their distribution to the karst regions of southwestern China and exhibit highly specialized morphologies (Lan et al., 2013; Li, 2018). This has led to inadequately resolved taxonomies and enigmatic phylogenetic relationships among cave groups. The presence of both subterranean and surface-dwelling phenotypes among these genera, as well as the influence of convergent evolution, make it challenging to distinguish them based on morphological characteristics alone. The classification of Chinese cave loaches has been the subject of debate, ...


  



Karstsinnectes Zhou, Luo, Wang, Zhou & Xiao, gen. nov.
Type species: Oreonectes anophthalmus Zheng, 1981.

Diagnosis: (1) body naked, scaleless, and body color pattern absent; (2) eyes absent; (3) lips with furrows but no papillae; (4) anterior and posterior nostrils slightly separated, anterior nostril tube long, without elongated short barbel-like tip; (5) without longitudinal stripe; (6) dorsal fin with 7 branched rays, dorsal-fin origin slight posterior to ventral-fin origin; (7) caudal fin forked or rounded, caudal peduncle with adipose crests; (8) cheeks scaleless; (9) lateral line and cephalic lateral-line canals present; (10) bony capsule of swim bladder open posteriorly.

Etymology: The genus name Karstsinnectes is a combination of words. Karst is an English word meaning an area of water-eroded limestonesin is an abbreviation of the Greek word Sino, refers to Chinesenectes, a Greek word meaning swimmer. We suggest its English common name “Chinese Karst Loach Genus” and Chinese common name “Zhōng Huá Kā Qiū Shǔ (中华喀鳅属)”.

Distribution: Currently, this genus includes four species, i.e., Karstsinnectes acridorsalis (Lan, 2013) comb. nov., Karstsinnectes anophthalmus (Zheng, 1981) comb. nov., Karstsinnectes hyalinus (Lan, Yang & Chen,1996) comb. nov., and Karstsinnectes parvus (Zhu & Zhu, 2014) comb. nov., all of which distributed in the Hongshuihe, Zuojiang, and Youjiang river basins in Guangxi, China.


Tao Luo, Qin Yang, Li Wu, Ya-Li Wang, Jia-Jun Zhou, Huai-Qing Deng, Ning Xiao, Jiang Zhou. 2023. Phylogenetic Relationships of Nemacheilidae Cavefish (HeminoemacheilusOreonectesYunnanilusParanemachilus, and Troglonectes) revealed by Analysis of Mitochondrial Genome and Seven Nuclear Genes. Zoological Research. 44(4): 693-697. DOI: 10.24272/j.issn.2095-8137.2022.266 

Thursday, November 30, 2023

[Ichthyology • 2023] Balitora anlongensis • the First Cavefish Species of the Genus Balitora (Cypriniformes: Balitoridae) from Guizhou Province, southwest China


Balitora anlongensis Luo, Chen, Zhao, Yu, Lan & Zhou,

in Luo, Chen, Zhao, Yu, Lan, Zhou, Xiao et Zhou, 2023.

Abstract
This work describes a new species, Balitora anlongensis sp. nov., collected from a cave at Xinglong Town, Anlong County, Guzihou, China. Phylogenetic trees reconstructed based on two mitochondrial and three nuclear genes show that the new species represents an independent evolutionary lineage with large genetic differences, 7.1%–12.0% in mitochondrial gene cytochrome b and 9.2%–12.1% in cytochrome oxidase subunit 1, from congeners. Morphologically, the new species can be distinguished from the 18 species currently assigned to the genus Balitora by a combination of characters, most clearly by having two pairs of maxillary barbels; 8½ branched dorsal-fin rays; 5½ branched anal-fin rays; pectoral fin not reaching pelvic fin origin; dorsal-fin origin in front of pelvic fin origin; eye small (eye diameter approximately equal to outer maxillary barbel length); and fins lacking pigment in live fish. The new species represents the first record of Balitora inhabiting caves in China and increases the number of species in the genus Balitora in its present concept from 18 to 19. The study suggests that more evidence is needed to further clarify the taxonomic composition of the genus Balitora.

Key words: Nanpanjiang River, stone loach, taxonomy, phylogeny
 
Morphological characters of holotype GZNU20230215007 of Balitora anlongensis sp. nov. in preservative (10% formalin)
A lateral view B dorsal view C ventral view D ventral side view of head, and E dorsal side view of head. Photos from Tao Luo. Abbreviations: M, maxillary barbels; AN, anterior nostril.

Balitora anlongensis sp. nov. in life, paratypes GZNU20230106001 (photos A and B) and GZNU20230215014 (photo C)
A right-side view B ventral side view, and C dorsal view.
Photographs A, B were shot indoors at ~ 9:00 p.m. Photo C was taken in the cave at ~ 15:00 noon.

 Balitora anlongensis Luo, Chen, Zhao, Yu, Lan & Zhou, sp. nov.

Diagnosis: Balitora anlongensis sp. nov. can be distinguished from other congeners by the following combination of characters: (1) two pairs of maxillary barbels; (2) dorsal fin rays iii, 8½; (3) pectoral fin viii, 11; (4) pelvic fin rays ii, 9; (5) anal fin rays iii, 5½; (6) lateral-line scales 66–68; (7) tip of pectoral fin not reaching to the pelvic fin origin; (8) dorsal fin origin anterior to the pelvic fin origin; (9) tip of the pelvic fin reaching to the anus; (10) eyes small, eye diameter equal to outer maxillary barbel length; (11) six to seven indistinctly separated transversely oval blotches on the dorsal side; and (12) each fin transparent and unpigmented in life.

Etymology: The specific epithet “anlongensis” is in reference to the type locality of the new species: NaNao Village, Xinglong Town, Anlong County, Guizhou Province, China. We propose the common English name “Anlong stone loach” and the Chinese name “ān lóng Pá Qīu (安龙爬鳅)”.


 Tao Luo, Zhi-Xia Chen, Xin-Rui Zhao, Jing Yu, Chang-Ting Lan, Jia-Jun Zhou, Ning Xiao and Jiang Zhou. 2023. Balitora anlongensis, the First Cavefish Species of the Genus Balitora (Teleostei, Balitoridae) from Guizhou Province, southwest China. ZooKeys. 1185: 21-42. DOI: 10.3897/zookeys.1185.108545


Sunday, November 5, 2023

[Ichthyology • 2020] ’Henicorhynchusthaitui • A New Species of Cavefish (Cypriniformes: Cyprinidae) from Central Vietnam


Henicorhynchus thaitui 
Nguyen, Ho, Hoang, Wu & Zhang, 2020


Abstract
Henicorhynchus’ thaitui sp. nov. is described from a subterranean stream in a karst cave in Phong Nha Ke Bang National Park, Quang Binh Province, Central Vietnam. It differs from all congeners in having a pale pink body in life, smaller eyes with diameter less than the maxillary barbel length, and two pairs of barbels, the maxillary barbel being much longer than the rostral barbel.

Keywords: Cypriniformes, karst system, morphology, Southeast Asia, taxonomy

Lateral view of ‘Henicorhynchus thaitui sp. nov.:
a IEBR 105901, holotype, 74.3 mm SL; and b IHB 2016105898, paratype, 98.0 mm SL. Both specimens caught in central Vietnam: Son River system in Gianh river drainage: Khe Lanh Cave.  

Henicorhynchus thaitui sp. nov., specimen not preserved,
about 100 mm SL, Vietnam: Khe Lanh cave; life coloration.


Henicorhynchusthaitui sp. nov.

Diagnosis: Henicorhynchusthaitui sp. nov. can be distinguished from all congeners by having a whitish pink body in life (vs. white or silvery body with a humeral mark or some longitudinal stripes), smaller (vs. larger) eyes (diameter less than vs. greater than maxillary barbel length) and maxillary barbel longer (vs. shorter) than rostral barbel. ‘Henicorhynchusthaitui, along with H. horai (Bănărescu, 1986) and H. inornatus (Roberts, 1997), is further distinct from all other congeners in having 9 (vs. 8) branched dorsal-fin rays. Along with H. horai, it differs from all other congeners in the presence of rostral barbels (vs. absent) and 39–41 (vs. 34–36) lateral-line scales. ‘Henicorhynchusthaitui differs from H. horai and H. inornatus in the presence of two (vs. one) pairs of maxillary and rostral barbels (vs. only the maxillary barbel in H. inornatus and only the rostral barbel in H. horai); from H. horai in having fewer vertebrae (34 vs. 38–41), and a laterally compressed body (vs. cylindrical in H. horai); and from H. inornatus in having 39–40 (vs. 35 in H. inornatus) lateral-line pored scales, and in the absence of a humeral mark (vs. present in H. inornatus).

Etymology: The specific name is a noun in the genitive case, honoring Nguyen Thai Tu, ichthyologist from Vinh University, who has contributed considerably to the taxonomy of freshwater fishes in Vietnam.


Dinh Tao Nguyen, Anh Tuan Ho, Ngoc Thao Hoang, Hua Wu and E Zhang. 2020. ‘Henicorhynchusthaitui, A New Species of Cavefish from Central Vietnam (Teleostei, Cyprinidae).  ZooKeys. 965: 85-101. DOI: 10.3897/zookeys.965.52751

   

Tuesday, February 7, 2023

[Ichthyology • 2023] Neolissochilus pnar • The World’s Largest Cave Fish from Meghalaya, Northeast India (Cypriniformes: Cyprinidae: Torinae)


 Neolissochilus pnar 
Dahanukar, Sundar, Rangad, Proudlove & Raghavan, 2023


Abstract
The world’s largest subterranean fish was discovered in 2019, and was tentatively identified as a troglomorphic form of the golden mahseer, Tor putitora. Detailed analyses of its morphometric and meristic data, and results from molecular analyses now reveal that it is a new species of the genus Neolissochilus, the sister taxon of Tor. We formally describe the new species as Neolissochilus pnar, honouring the tribal communities of East Jaintia hills in Meghalaya, Northeast India, from where it was discovered. Neolissochilus pnar possesses a number of characters unique among species of Neolissochilus, with the exception of the similarly subterranean N. subterraneus from Thailand. The unique characters that diagnose N. pnar from all epigean congeners comprise highly reduced eye size to complete absence of externally visible eyes, complete lack of pigmentation, long maxillary barbels, long pectoral-fin rays, and scalation pattern. Neolissochilus pnar is distinguished from the hypogean N. subterraneus, the type locality of which is a limestone cave ~2000 kms away in Central Thailand, by a lesser pre-pelvic length (47.8–49.4 vs. 50.5–55.3 %SL), a shorter caudal peduncle (16.1–16.8 vs. 17.8–23.7 %SL), and shorter dorsal fin (17.4–20.8 vs. 21.5–26.3 %SL). In addition, Neolissochilus pnar is also genetically and morphologically distinct from its close congeners with a raw genetic divergence of 1.1–2.7% in the COI gene with putative topotype of N. hexastichus and 2.1–2.6% with putative topotype of N. hexagonolepis.

Keywords: Eastern Himalaya, limestone cave, mahseer, new species, subterranean fishes


  

Live images of  Neolissochilus pnar in their habitat from Krem Um Ladaw
 (Photos A, B, C: Uros Aksamovic, D: Dan Harries).

Neolissochilus pnar sp. nov.
 
Diagnosis: Neolissochilus pnar is distinguished from all its congeners by mandibular barbel long, reaching anterior margin of opercle (vs. short, not reaching margin of opercle). It is further distinguished from all epigean congeners by atrophied eyes, highly reduced in size in juveniles and small-adults and absence of externally visible eyes in adults (vs. presence of well-developed eyes in all life-stages); complete absence of pigmentation (vs. presence); long pectoral-fin reaching anterior base of pelvic fin (vs. short, not reaching anterior base of pelvic fin); and distinct scalation pattern with 28+2 (2) or 31+1 (1) lateral line scales, 8 scales in transverse series with 4 above the lateral line and 3 below the lateral line. Neolissochilus pnar is distinguished from the only other subterranean congener, N. subterraneus by shorter pre-pelvic length (47.8–49.4 vs. 50.5–55.3 %SL), shorter caudal-peduncle length (16.1–16.8 vs. 17.8–23.7 %SL) and shorter dorsal-fin length (17.4–20.8 vs. 21.5–26.3 %SL).

Etymology: The species name pnar, honours the ‘pnar’, the sub-tribal group of the Khasi people in the state of Meghalaya, India.


Neelesh Dahanukar, Remya L. Sundar, Duwaki Rangad, Graham Proudlove and Rajeev Raghavan. 2023. The World’s Largest Cave Fish from Meghalaya, Northeast India, is A New Species, Neolissochilus pnar (Cyprinidae, Torinae). Vertebrate Zoology. 73: 141-152. DOI: 10.3897/vz.73.e101011

Friday, January 27, 2023

[Ichthyology • 2023] Horaglanis populiEvolution in the Dark: Unexpected Genetic Diversity and Morphological Stasis in the Blind, Aquifer-dwelling Catfish Horaglanis (Siluriformes: Clariidae)


Horaglanis populi
Raghavan, Sundar, Arjun, Britz & Dahanukar, 2023
 

Abstract
The lateritic aquifers of the southern Indian state of Kerala harbour a unique assemblage of enigmatic stygobitic fishes which are encountered very rarely, only when they surface during the digging and cleaning of homestead wells. Here, we focus on one of the most unusual members of this group, the catfish Horaglanis, a genus of rarely-collected, tiny, blind, pigment less, and strictly aquifer-residing species. A six-year exploratory and citizen-science backed survey supported by molecular phylogenetic analysis reveals novel insights into the diversity, distribution and population structure of Horaglanis. The genus is characterized by high levels of intraspecific and interspecific genetic divergence, with phylogenetically distinct species recovered above a 7.0% genetic-distance threshold in the mitochondrial cytochrome oxidase subunit 1 gene. Contrasting with this deep genetic divergence, however, is a remarkable stasis in external morphology. We identify and describe a new cryptic species, Horaglanis populi, a lineage that is the sister group of all currently known species. All four species are represented by multiple haplotypes. Mismatch distribution reveals that populations have not experienced recent expansions.

KeywordsCryptic species, groundwater, Kerala, molecular ecology, stygobitic, subterranean


Horaglanis populi in life. B Typical laterite rock showing tiny pores. C Homestead lateritic dug-out well in Kerala – habitat of Horaglanis.


Horaglanis populi holotype (KUFOS.F.2022.101, 32.5 mm standard length) in A life and B–F immediately after preservation.
A, B Lateral view; C ventral view; D dorsal view; E lateral view of head; F ventral view of head.

Horaglanis populi, sp. nov. 

Diagnosis: A species of Horaglanis as evidenced by the absence of eyes and pigment, a blood-red body in life, a highly reduced pectoral fin in which only a shortened spine is present, an elongate body with long dorsal and anal fins extending to the base of the caudal peduncle, and four pairs of well-developed barbels. Genetically, Horaglanis populi forms a distinct clade, the sister group to the other three congeners (Fig. 2), from which it differs by a genetic uncorrected p distance of 13.8–17.4% in the COI gene, and between 12.3–14.0% in the cyt b gene. Specifically, H. populi differs from all three known species in the barcoding gene (Supplementary Table S4) in positions 106 (C vs. T), 115 (T vs. C), 142 (T vs. C), 171 (G vs. A), 183 (T vs. C), 216 (A vs. C or T), 234 (C vs. T), 237 (G vs. A), 265 (T vs. G), 270 (C vs. A), 312 (A vs. C or T), 324 (A vs. C), 325 (T vs. C) 330 (G. vs. A or T), 350 (G vs. T), 363 (T vs. G), 421 (C vs. G), 448 (C vs. T), 481 (G vs. T), 489 (C vs. T), 496 (A vs. G), 517 (c vs. T), 528 (G vs. T), 533 (G vs. A), 538 (A vs. C), 539 (A vs. G), 542 (T vs. C), 565 (T vs. A), 576 (G vs. T or C), 597 (A vs. C), 618 (C vs. T), 633 (G vs. A) and 636 (C vs. T).

EtymologyThe species name populi, genitive of the Latin noun populus people, honours the invaluable contributions made by interested members of the public in the southern Indian state of Kerala, helping to document the biodiversity of subterranean and groundwater systems, including the discovery of this new species.


Rajeev Raghavan, Remya L. Sundar, C.P. Arjun, Ralf Britz and Neelesh Dahanukar. 2023. Evolution in the Dark: Unexpected Genetic Diversity and Morphological Stasis in the Blind, Aquifer-dwelling Catfish Horaglanis. Vertebrate Zoology. 73: 57-74. DOI: 10.3897/vz.73.e98367


Wednesday, January 18, 2023

[Ichthyology • 2023] Sinocyclocheilus longicornus • A New Species of Microphthalmic Hypogean Fish (Cypriniformes: Cyprinidae) from Guizhou, Southwest China


Sinocyclocheilus longicornus Luo, Xu, Wu, Zhou & Zhou,

in Xu, Luo, Zhou, Wu, Zhao, Yang, Xiao & Zhou, 2023. 

Abstract
Sinocyclocheilus longicornus sp. nov. is described from the Pearl River basin in Hongguo Town, Panzhou City, Guizhou Province, Southwest China. Based on the presence of the long horn-like structure on the back of the head, Sinocyclocheilus longicornus sp. nov. is assigned to the Sinocyclocheilus angularis species group. Sinocyclocheilus longicornus sp. nov. is distinguished from its congeners by a combination of morphological characters: (1) presence of a single, relatively long horn-like structure on the back of the head; (2) pigmentation absent; (3) reduced eyes; (4) dorsal-fin rays, ii, 7; (5) pectoral-fin rays, i, 13; (6) anal-fin rays, iii, 5; (7) pelvic-fin rays, i, 7; (8) lateral line pores 38–49; (9) gill rakers well developed, nine on first gill arch; and (10) tip of adpressed pelvic fin not reaching anus.

Keywords: cave fish, morphology, taxonomy, phylogeny

Lateral view of adult male holotype GZNU20210503002 of Sinocyclocheilus longicornus sp. nov. in preservative. A left side view B right side view.

Live adult male paratype of Sinocyclocheilus longicornus sp. nov. 

 Sinocyclocheilus longicornus Luo, Xu, Wu, Zhou & Zhou, sp. nov.
 
Diagnosis: Sinocyclocheilus longicornus sp. nov. can be distinguished from all other congeners by the following combination of characters: (1) having a single, relatively long horn-like structure on the back of the head; (2) body scaleless, albinotic body without pigmentation; (3) reduced eyes; (4) dorsal-fin rays, ii, 7; (5) pectoral-fin rays, i, 13; (6) anal-fin rays, iii, 5; (7) pelvic-fin rays, i, 7; (8) lateral line pores 38–49; (9) gill rakers well developed, 9 on first gill arch; (10) tip of the pelvic-fin rays not reaching the anus when pelvic-fin rays extended backward.

Etymology: The specific epithet longicornus is an invariable noun in apposition, derived from the Latin words longus, meaning long, and cornu or cornus, meaning horn of the forehead, in reference to the presence of a long horn-like structure on the forehead of the species. We propose the English common name Long-Horned Golden-lined Fish and the Chinese common name Cháng Jiǎo Jīn Xiàn Bā (长角金线鲃).


 Cheng Xu, Tao Luo, Jia-Jun Zhou, Li Wu, Xin-Rui Zhao, Hong-Fu Yang, Ning Xiao and Jiang Zhou. 2023. Sinocyclocheilus longicornus (Cypriniformes, Cyprinidae), A New Species of Microphthalmic Hypogean Fish from Guizhou, Southwest China. ZooKeys. 1141: 1-28. DOI: 10.3897/zookeys.1141.91501