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Evangelos Pafilis
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2020 – today
- 2023
- [j15]Fotis A. Baltoumas, Evangelos Karatzas, David Páez-Espino, Nefeli K. Venetsianou, Eleni Aplakidou, Anastasis Oulas, Robert D. Finn
, Sergey Ovchinnikov, Evangelos Pafilis, Nikos Kyrpides, Georgios A. Pavlopoulos
Exploring microbial functional biodiversity at the protein family level - From metagenomic sequence reads to annotated protein clusters. Frontiers Bioinform. 3 (2023) - [i1]Robert M. Waterhouse
The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity. F1000Research 12: 499 (2023)
2010 – 2019
- 2019
- [j14]Anastasia Chasapi, Michalis Aivaliotis, Lefteris Angelis, Anastasios Chanalaris, Ioannis Iliopoulos, Ilias Kappas, Christos Karapiperis, Nikos Kyrpides
Establishment of computational biology in Greece and Cyprus: Past, present, and future. PLoS Comput. Biol. 15(12) (2019) - 2016
- [j13]Petra ten Hoopen
Value, but high costs in post-deposition data curation. Database J. Biol. Databases Curation 2016 (2016) - [j12]Evangelos Pafilis, Pier Luigi Buttigieg
EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation. Database J. Biol. Databases Curation 2016 (2016) - [j11]Qinghua Wang, Shabbir Syed-Abdul
Overview of the interactive task in BioCreative V. Database J. Biol. Databases Curation 2016 (2016) - [j10]Pier Luigi Buttigieg
The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation. J. Biomed. Semant. 7: 57 (2016) - [c3]Helen Cook, Evangelos Pafilis, Lars Juhl Jensen:
A dictionary- and rule-based system for identification of bacteria and habitats in text. BioNLP (Shared Task) 2016: 50-55 - 2015
- [j9]Nikolas Papanikolaou, Georgios A. Pavlopoulos
BioTextQuest+: a knowledge integration platform for literature mining and concept discovery. Bioinform. 31(6): 979 (2015) - [j8]Evangelos Pafilis, Sune Pletscher-Frankild
ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life. Bioinform. 31(11): 1872-1874 (2015) - 2014
- [j7]Nikolas Papanikolaou, Georgios A. Pavlopoulos
BioTextQuest+: a knowledge integration platform for literature mining and concept discovery. Bioinform. 30(22): 3249-3256 (2014) - 2013
- [c2]Evangelos Pafilis, Georgios A. Pavlopoulos
OnTheFly 2.0: A tool for automatic annotation of files and biological information extraction. BIBE 2013: 1-4 - 2011
- [j6]Nikolas Papanikolaou, Evangelos Pafilis, Stavros Nikolaou, Christos A. Ouzounis
BioTextQuest: a web-based biomedical text mining suite for concept discovery. Bioinform. 27(23): 3327-3328 (2011) - 2010
- [j5]Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. J. Biomed. Semant. 1: 8 (2010) - [j4]Seán I. O'Donoghue
Reflect: A practical approach to web semantics. J. Web Semant. 8(2-3): 182-189 (2010)
2000 – 2009
- 2009
- [b1]Evangelos Pafilis:
Web-based named entity recognition and data integration to accelerate molecular biology research. Heidelberg University, 2009 - [j3]Georgios A. Pavlopoulos
OnTheFly: a tool for automated document-based text annotation, data linking and network generation. Bioinform. 25(7): 977-978 (2009) - 2008
- [j2]Heinz Stockinger
Experience using web services for biological sequence analysis. Briefings Bioinform. 9(6): 493-505 (2008) - [j1]Georgios A. Pavlopoulos
Arena3D: visualization of biological networks in 3D. BMC Syst. Biol. 2: 104 (2008) - 2004
- [c1]Ela Hunt, Evangelos Pafilis, Inga Tulloch, John Wilson:
Index-Driven XML Data Integration to Support Functional Genomics. DILS 2004: 95-109
Coauthor Index
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