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Showing posts with label Scincidae - Skink. Show all posts
Showing posts with label Scincidae - Skink. Show all posts

Monday, December 23, 2024

[Herpetology • 2024] Hidden on the Roof of the World: Mitochondrial Data Reveals Exceptional Genetic Diversity of Himalayan Ablepharine Skinks (Reptilia: Scincidae)


Diversity of the Asian Ablepharine skinks from mtDNA sequences:
Protoblepharus (blue), the Ablepharus sikkimensis group (yellow), the Ablepharus himalayanus group (red), and the Ablepharus ladacensis group (green).


in Bragin, Litvinchuk, Borkin, Melnikov, Skorinov, ...et Poyarkov, 2024. 

Abstract
Snake-eyed, or ablepharine skinks, are common residents of the highest mountain ranges on Earth, including the Himalayas, the Tibetan Plateau, Karakoram, Pamir, and Tian Shan, colloquially known as the Roof of the World. Historically, these skinks were alternatively assigned to the genera Scincella, Ablepharus, Asymblepharus, and Himalblepharus, but recent revisions proposed to group them in only two genera, namely Protoblepharus (the eastern Himalayan taxa) and Ablepharus (all other taxa). The taxonomy of this group yet remains in a state of flux due to the limited informativeness of available phylogenies (often with little material from the Himalayan region), discrepancies in morphological patterns of variation, and the potentially high yet unconsidered degree of diversity of the group. To shed some light, we assess the mitochondrial diversity and evolution of Himalayan snake-eyed skinks based on >200 individuals sampled across Pakistan, India, Nepal, and China, representing nine out of ten Himalaya currently recognized species. Phylogenetic relationships were inferred from 2998 bp of mitochondrial sequences (12S, 16S, ND2, cyt b). Our analyses reveal a remarkably high cryptic diversity, including 14 to 16 species-level lineages within Ablepharus and four species-level lineages within Protoblepharus, which would substantially increase the number of species by at least twofold. This hidden diversity highlights the Himalayas as a center of phylogeographic diversification and endemism, likely shaped by geological and climatic factors associated with orogenesis, which now houses over half of the ablepharine skink species.

Keywords: Ablepharus; biogeography; distribution; Himalaya; Himalblepharus; lizards; mtDNA barcoding; Protoblepharus; Sphenomorphinae

Distribution of the major clades of AblepharusProtoblepharus (blue), the Ablepharus sikkimensis group (yellow), the Ablepharus himalayanus group (red), the Ablepharus ladacensis group (green), and the ‘core’ Ablepharus with fully or partially fused eyelids (white).
Distribution of the Ablepharine skinks in the Himalaya: Protoblepharus (blue), the Ablepharus sikkimensis group (yellow), the Ablepharus himalayanus group (red), and the Ablepharus ladacensis group (green).


Andrey M. Bragin, Spartak N. Litvinchuk, Leo J. Borkin, Daniel A. Melnikov, Dmitriy V. Skorinov, Daniel Jablonski, Rafaqat Masroor, Hmar Tlawmte Lalremsanga, Zeeshan A. Mirza, Christophe Dufresnes and Nikolay A. Poyarkov. 2024. Hidden on the Roof of the World: Mitochondrial Data Reveals Exceptional Genetic Diversity of Himalayan Ablepharine Skinks (Reptilia: Scincidae). Russian Journal of Herpetology. 31(6); 351 – 368. DOI: doi.org/10.30906/1026-2296-2024-31-6-351-368

Tuesday, November 12, 2024

[Herpetology • 2024] Scincella fansipanensis • A New Species of the Genus Scincella (Squamata: Scincidae) from Mount Fansipan, Hoang Lien Son Range, northwestern Vietnam

 

Scincella fansipanensis 
Okabe, Motokawa, Koizumi, T. Q. Nguyen, T. T. Nguyen & Bui, 2024. 
 
 Fansipan ground skink | Thằn lằn cổ fansipan  ||  DOI: doi.org/10.11646/zootaxa.5537.3.7 
 
Abstract
We describe a new species of the genus Scincella Mittleman, 1950 from northwestern Vietnam, based on a new collection of ground skinks from Mount Fansipan of the Hoang Lien Son Range in Lao Cai Province. Scincella fansipanensis sp. nov. is distinguished from other Scincella species in the Indochina region and southern China by body size (SVL), separation of prefrontals, number of midbody scale rows, paravertebral scale rows, nuchals and subdigital lamellae on toe IV, separation of toe from finger when limbs are adpressed along the body, and dorsal color pattern. The new species is further distinguished from its congeners by uncorrected genetic distances of 14.60–21.41% (COI gene). The new species is currently known only from high elevation areas of Mt. Fansipan in Vietnam. 

Reptilia, Ground skink, genetic divergence, morphological characteristics, taxonomy, Lao Cai Province
 
Dorsolateral (A) and ventral (B) views of Scincella fansipanensis sp. nov. (holotype, IEBR R.5188).

Map showing Mt. Fansipan (red circle), Hoang Lien Son Range, Vietnam (A), habitat at the type locality of Scincella fansipanensis sp. nov. (B), and an individual in life (IEBR R.5188) (C). 

  Scincella fansipanensis sp. nov. 

Diagnosis. Scincella fansipanensis sp. nov. is distinguished from other congeners by a combination of the following morphological characteristics: size medium (SVL up to 59.0 mm; AG up to 36.5 mm); 22 (rarely 24) midbody scale rows, smooth; 60–68 paravertebral scale rows; 58–64 ventral scale rows; prefrontals separated from each other; five (rarely six) supraciliaries; two to six nuchals; ear opening present, tympanum deeply sunk, without lobules; limbs short, toe separated from finger when limbs adpressed; toe IV with 10–12 subdigital lamellae, smooth; and dorsal surface of body with irregularly shaped dark spots.

Etymology. The specific name “fansipanensis” is derived from Mt. Fansipan. As the common name, we suggest Fansipan ground skink (English) and Thằn lằn cổ fansipan (Vietnamese).


Shinya Okabe, Masaharu Motokawa, Yuki Koizumi, Truong Quang Nguyen, Tao Thien Nguyen and Hai Tuan Bui. 2024. A New Species of the Genus Scincella (Squamata: Scincidae) from Mount Fansipan, Hoang Lien Son Range, northwestern Vietnam.  Zootaxa. 5537(3); 407-423. DOI: doi.org/10.11646/zootaxa.5537.3.7 

Sunday, November 3, 2024

[Herpetology • 2024] Liopholis aputja • A New Species of Rock Skink (Scincidae: Liopholis) from the Central Ranges Bioregion of Arid Australia

 

 Liopholis aputja Farquhar, Mulder, Russell, Haines & Chapple, 

in Farquhar, Mulder, Russell, Haines, Anangu Rangers et Chapple, 2024.

Abstract
A new species of rock skink Liopholis Fitzinger 1843 (Scincidae) is described from the Mann-Musgrave Ranges of north-western South Australia. Liopholis margaretae sensu lato (Storr 1968) is currently known to occur in two disjunct populations: the MacDonnell Ranges bioregion and nearby regions in the Northern Territory, and the Central Ranges bioregion in South Australia. Based on morphological examination of both museum and field specimens, as well as on newly generated molecular data, we show that specimens from these two ranges constitute distinct species. The new species, Liopholis aputja sp. nov. is endemic to a specific geological landform (Mann-Musgrave Ranges) within the Central Ranges bioregion, and is estimated to have diverged from the MacDonnell Ranges population during widespread aridification of the Miocene. Liopholis aputja sp. nov. is distinguished from congeners by a combination of its moderately large size (SVL up to 135 mm), relatively pointed snout, smooth dorsal scales, black and calloused subdigital lamellae and soles of feet, and possessing usually six supraciliary scales and usually four enlarged ear lobules. This new species adds to the list of endemic herpetofauna recognised in the Central Ranges bioregion.

Reptilia, Australian Arid Zone, Central ranges bioregion, Liopholis aputja sp. nov., Liopholis margaretae, lizard, mitochondrial DNA, phylogenetic analysis, skink, species


Liopholis aputja Farquhar, Mulder, Russell, Haines & Chapple sp. nov.
 
Etymology. Aputja is a word from the Pitjantjatjara/yankunytjatjara language spoken by First Nations peoples where this lizard species is found in APY (Aṉangu Pitjantjatjara Yankunytjatjara) Lands of north-western South Australia. Aputja means ‘of the hills’, in reference to this species occurring in the hills and gorges of the Mann-Musgrave ranges, unlike other Liopholis spp. of the region which occur on sandplains. the specific epithet is constructed as a noun in apposition. In arriving at this name, we spoke to rangers, traditional owners and knowledge holders across the APy lands; in Pukatja, Fregon, Mimili/Amaroona, Indulkana, Amata and Pipalyatjara. responses to asking for the name of the new Liopholis species varied. however, particular clarity in narrowing the name down to Aputja was provided by the following traditional owners: Allan Wilson (Indulkana/Pukatja), Johnny Roberts (Fregon), Winmati Roberts (Fregon/umuwa), Manyiritjanu Lennon (Pukatja), and Hughie Cullinan (Mimili/Amaroona). The common name Central ranges rock Skink is chosen because L. aputja sp. nov. is endemic to the Central ranges bioregion (Thackway & Cresswell 1995). We chose the words ‘rock skink’ for clarity and consistency, given that most other saxicoline members of the Liopholis genus are commonly referred to as rock skinks (Australian Society of herpetologists 2023). 
 

Jules E. Farquhar, Jordan A. Mulder, Wyn Russell, Margaret L. Haines, Anangu Rangers and David G. Chapple. 2024. A New Species of Rock Skink (Scincidae: Liopholis) from the Central Ranges Bioregion of Arid Australia. Zootaxa. 5536(1); 153-177. DOI: doi.org/10.11646/zootaxa.5536.1.6 

Monday, August 26, 2024

[Herpetology • 2024] Evolutionary Bursts drive Morphological novelty in the World’s Largest Skinks



in Brennan, Chapple, Keogh ... et Donnellan, 2024.

Highlights: 
• A new and reliable species tree of Tiliquini skinks (bluetongues and relatives)
• Patterns of morphological trait evolution are heterogeneous
• Nested “bursts” in evolution lead to new phenotypes

Summary
Animal phenotypes evolve and diverge as a result of differing selective pressures and drift. These processes leave unique signatures in patterns of trait evolution, impacting the tempo and mode of morphological macroevolution. While there is a broad understanding of the history of some organismal traits (e.g., body size), there is little consensus about the evolutionary mode of most others. This includes the relative contribution of prolonged (Darwinian gradualist) and episodic (Simpsonian jump) changes toward the evolution of novel morphologies. Here, we use new exon-capture and linear morphological datasets to investigate the tempo and mode of morphological evolution in Australo-Melanesian Tiliquini skinks. We generate a well-supported time-calibrated phylogenomic tree from ∼400 nuclear markers for more than 100 specimens, including undescribed diversity, and provide unprecedented resolution of the rapid Miocene diversification of these lizards. By collecting a morphological dataset that encompasses the lizard body plan (19 traits across the head, body, limb, and tail), we are able to identify that most traits evolve conservatively, but infrequent evolutionary bursts result in morphological novelty. These phenotypic discontinuities occur via rapid rate increases along individual branches, inconsistent with both gradualistic and punctuated equilibrial evolutionary modes. Instead, this “punctuated gradualism” has resulted in the rapid evolution of blue-tongued giants and armored dwarves in the ∼20 million years since colonizing Australia. These results outline the evolutionary pathway toward new morphologies and highlight the heterogeneity of evolutionary tempo and mode, even within individual traits.
 
Keywords: morphological evolution, Simpsonian, skink phylogenomics, Tiliquini




 
Ian G. Brennan, David G. Chapple, J. Scott Keogh ... et Stephen Donnellan. 2024. Evolutionary Bursts drive Morphological novelty in the World’s Largest Skinks. Current Biology. In Press. DOI: doi.org/10.1016/j.cub.2024.07.039 


(a) Monkey-tailed skink (Corucia zebrata) (b) Western bluetongue (Tiliqua occipitalis
(c) Shingleback lizard (Tiliqua rugosa) (d) Yakka skink (Egernia rugosa
(e) Tree skink (Egernia striolata) (f) Pygmy spiny-tailed skink (Egernia depressa)
(g) Mainland She-oak skink (Cyclodomorphus michaeli) (h) Crocodile skink (Tribolonotus gracilis)
... These lizards represent some of the extremes of the diversity we see in the 'Social Skinks' a group mostly found in Australia.

Tuesday, July 30, 2024

[Herpetology • 2024] Panaspis ericae & P. mundavamboA Treasure Trove of Endemics: Two New Species of Snake-eyed Skinks of the Genus Panaspis Cope, 1868 (Squamata: Scincidae) from the Serra da Neve Inselberg, southwestern Angola


 Panaspis ericae  
 Marques, Parrinha, Lopes-Lima, Tiutenko, Bauer & Ceríaco, 2024

photos by Arthur Tiutenko.

 Abstract
Four species of the genus Panaspis P. cabindae, P. wahlbergii, P. maculicollis and P. mocamedensis – are currently known from Angola. The analysis of recently collected specimens from Serra da Neve Inselberg, an isolated mountain located in northern Namibe Province, revealed unexpected taxonomic diversity in the group. Using an integrative taxonomy approach based on morphological and DNA sequence data, with both mitochondrial (16S) and nuclear (RAG-1) genes, we were able to distinguish two distinct populations, described here as two new species, Panaspis ericae sp. nov. and P. mundavambo sp. nov. Both species are assumed to be endemic to the inselberg. This reinforces our notion of southwestern Angola as a hotspot of skink diversity, and highlights the urgent need for the conservation of Serra da Neve.

Key Words: Reptiles, integrative taxonomy, Africa, herpetofauna, cryptic species


Live photos of Panaspis ericae sp. nov. 
the holotype (MUNHAC/MB03-001525) from vicinity of Catchi, Serra da Neve.  
 the paratype (MUNHAC/MB03-001531) from vicinity of Maylowe, Serra da Neve.
photos by Arthur Tiutenko.

 Panaspis ericae sp. nov.

Etymology: The specific epithet “ericae” is formed in the genitive singular and is feminine. It is given in honor of Erica Tavares (1997–), an Angolan biologist and conservationist. Through her work in the Angolan environmental platform “Eco Angola” (of which Erica is a co-founder), Erica has revolutionized the Angolan conservation and ecological discourse, providing opportunities for members of the Angolan civil society, students, and young researchers to learn, debate and contribute to environmental causes. We suggest “Erica’s Snake-Eyed Skink” and “Lagartixa da Manta-Morta de Erica” as the English and Portuguese common names, respectively, for this species.


 Panaspis mundavambo sp. nov.

Etymology: The specific epithet “mundavambo” refers to the Mukwando (local tribe) name for Serra da Neve Inselberg (Opunda Mundavambo), to which the species is endemic, and is applied here as a substantive in apposition. We propose the English vernacular name “Serra da Neve Snake-Eyed Skink” and the Portuguese vernacular name of “Lagartixa da Manta-Morta da Serra da Neve”.

 
Mariana P. Marques, Diogo Parrinha, Manuel Lopes-Lima, Arthur Tiutenko, Aaron M. Bauer and Luis M. P. Ceríaco. 2024. A Treasure Trove of Endemics: Two New Species of Snake-eyed Skinks of the Genus Panaspis Cope, 1868 (Squamata, Scincidae) from the Serra da Neve Inselberg, southwestern Angola. Evolutionary Systematics. 8(2): 167-182. DOI: doi.org/10.3897/evolsyst.8.121103

Monday, July 29, 2024

[Herpetology • 2024] Tropidophorus vongx • A New Species of the Genus Tropidophorus (Reptilia: Scincidae) from China-Vietnam Border Region in Southeastern Yunnan Province, China


Tropidophorus vongx 
Wang, Li, Mu, Xu & Che, 2024

 
Abstract
Based on morphological and genetic data, we describe a new species of Tropidophorus from the tropical karst landscape in southeastern Yunnan Province, China, close to the Vietnam border. Phylogenetically, the new species forms a clade with T. baviensis, T. murphyi, and T. hainanus, with p-distances ranging from 4.7–5.1% for the 16S gene and 3.9–6.8% for 12S gene. Morphologically, the new species shares the karst morphotype of Tropidophorus, particularly similar as T. murphyi and T. baviensis, in which all having a dorsally compressed head and body, smooth dorsal head scales, and distinctively keeled body scales. However, the new species can be distinguished from these similar species by numbers of supralabial scales, ventral scales, scales around the tail at the10th subcaudal, and a larger body size. We emphasize the urgency of conservation for the tropical karst landscape in northern Indochina.

Reptilia, cryptic species, conservation, Sphenomorphinae, Vietnam, water skink



Tropidophorus vongx sp. nov. 


Kai Wang, Ling Li, Hao-Nan Mu, Sheng-Jing Xu and Jing Che. 2024. A New Species of the Genus Tropidophorus Duméril, Bibron, 1839 (Reptilia: Squamata: Scincidae) from China-Vietnam Border Region in Southeastern Yunnan Province, China.  Zootaxa. 5486(1); 129-141. DOI: doi.org/10.11646/zootaxa.5486.1.6

Tuesday, July 16, 2024

[Paleontology • 2024] Electroscincus zedi • Compound Osteoderms preserved in Amber reveal the Oldest Known Skink


Electroscincus zedi
Daza, Stanley, Heinicke, Leah, Doucet, Fenner, Arias, Smith, Peretti, Aung & Bauer, 2024 


Abstract
Scincidae is one of the most species-rich and cosmopolitan clades of squamate reptiles. Abundant disarticulated fossil material has also been attributed to this group, however, no complete pre-Cenozoic crown-scincid specimens have been found. A specimen in Burmite (99 MYA) is the first fossil that can be unambiguously referred to this clade. Our analyses place it as nested within extant skinks, supported by the presence of compound osteoderms formed by articulated small ostedermites. The specimen has a combination of dorsal and ventral compound osteoderms and overlapping cycloid scales that is limited to skinks. We propose that this type of osteoderm evolved as a response to an increased overlap of scales, and to reduced stiffness of the dermal armour. Compound osteoderms could be a key innovation that facilitated diversification in this megadiverse family.

Electroscincus zedi. Fossil in ventral (a) and dorsal (b) views. Detail of the right foot (c, e) and osteoderms (d). X-ray of the whole specimen showing the skeletal remains, and several articulated and scattered osteoderms (f). Scale bar applies to the entire amber piece.
  
Electroscincus zedi, pectoral and pelvic girdle in ventral view (a, b). Numbers indicate digit number.

Systematic Paleontology.

Squamata Oppel, 1811.
Scincoidea Oppel, 1811.
Scincidae Gray, 1825.

Electroscincus zedi, gen. et sp. nov.

Diagnosis:
A small lizard with an estimated snout vent length (SVL) of 30 mm. Electroscincus zedi differs from all other known squamates from the Mesozoic by the presence of imbricate, compound osteoderms arranged in a staggered pattern around the body, supporting its placement in Scincidae (Figs. 2, 3). Its inclusion within Scincidae is also supported by its possession of cycloid scales around the body28 overlying compound osteoderms (in some Cordyliformes compound osteoderms are present in scales of the ventral surface only49,50). The osteoderms are very different from rectangular and imbricated paramacellodid osteoderms.
...

Holotype: Peretti Museum Foundation/ GRS GemResearch Swisslab AG (GRS-Ref-51036).

Type locality. Specimen comes from mid-Cretaceous (Late Albian/early Cenomanian) outcrops in the Myitkyina District, Hukawng Valley, Kachin Province, northern Myanmar, approximately 100 km west of the town of Myitkyina. Precise location of these mines, history of excavations, and stratigraphy of the Burmese amber deposits are summarized elsewhere51.

Etymology. The generic name is a combination of the Latin word for amber (electrum) and skink (scincus). The species epithet zedi refers to the bell-shaped stupas that house relics at Burmese Buddhist temples, referencing the smooth-sided amber housing the fossil remains, while also honoring David Temple, Curator of Paleontology at the Houston Museum of Natural Sciences (HMNS), for his contributions to palaeontology and public awareness of Burmite fossils (including the social conflict associated with its mining in Myanmar) by developing the exhibit “Amber Secrets, Feathers from the Age of Dinosaurs”.

Life reconstruction of Electroscincus zedi. Areas of the lizard not represented in the material available are depicted as blurred. Illustration by Stephanie Abramowicz.


Juan D. Daza, Edward L. Stanley, Matthew P. Heinicke, Chuck Leah, Daniel S. Doucet, Kelsey L. Fenner, J. Salvador Arias, Ru D. A. Smith, Adolf M. Peretti, Nyi Nyi Aung and Aaron M. Bauer. 2024. Compound Osteoderms preserved in Amber reveal the Oldest Known Skink. Scientific Reports. 14, 15662. DOI: 10.1038/s41598-024-66451-w

Friday, May 10, 2024

[Herpetology • 2024] Trachylepis attenboroughi, T. ovahelelo, T. vunongue, etc. • The Trachylepis (Squamata: Scincidae) of Angola : An Integrative Taxonomic Review with the Description of Seven New Species

 
 1. Trachylepis albilabris; 2. T. albopunctata; 3. T. ansorgii.
4. Trachylepis attenboroughi, sp. nov.8. Trachylepis bouri, sp. nov.13. T. hilariae, sp. nov.;
18. T. ovahelelo, sp. nov.; 19. T. suzanae, sp. nov.
 22. T. vunongue, sp. nov.; 25. T. wilsoni, sp. nov. 
Ceríaco,  Marques, Parrinha, Tiutenko, Weinell, Butler & Bauer, 2024

Drawings by Arthur Tiutenko.

Abstract
The genus Trachylepis is currently represented by 21 species in Angola, most of them part of nomenclaturally and taxonomically challenging species complexes. In this study we present an integrative taxonomic revision of the genus in Angola and describe seven new speciesTrachylepis attenboroughi, sp. nov., Trachylepis bouri, sp. nov., Trachylepis hilariae, sp. nov., Trachylepis ovahelelo, sp. nov., Trachylepis suzanae, sp. nov., Trachylepis vunongue, sp. nov., and Trachylepis wilsoni, sp. nov. As result of our taxonomic revisions, 25 valid Trachylepis species are now confirmed from Angola. A phylogenetic analysis using a combination of mitochondrial (16S, ND2) and nuclear (RAG1) markers, as well as morphological data, supports the recognition of the new species. In addition, data support the revalidation of Trachylepis albopunctata (Bocage, 1867), Trachylepis notabilis (Peters, 1879), and Trachylepis ansorgii (Boulenger, 1907). We also provide a redefinition of Euprepes anchietae Bocage, 1866, which we synonymize with Trachylepis maculilabris (Gray, 1845). Given that the type material for Trachylepis albopunctata, T. angolensis, and T. anchietae has been lost or destroyed, we designate neotypes for the purpose of nomenclatural stability. The description of the new species and the revision and revalidation of previously described Angolan species contribute to a better understanding of the taxonomy and biogeography of the genus, as well as to the general biogeographic patterns and evolution of the Angolan fauna.
 
Keywords: Skinks, Angola, Classification, Squamata, Trachylepis attenboroughi, Trachylepis bouri, Trachylepis hilariae, Trachylepis ovahelelo, Trachylepis suzanae, Trachylepis vunongue, Trachylepis wilsoni


 1. Trachylepis albilabris; 2. T. albopunctata; 3. T. ansorgii.
4. Trachylepis attenboroughi, sp. nov.; 5. T. bayonii; 6. T. binotata; 7. T. bocagii.
8. Trachylepis bouri, sp. nov.; 9, T. chimbana; 10. T. damarana; 11. T. hoeschi; 12. T. huilensis; 13. T. hilariae, sp. nov.; 14. T. laevis
Drawings by Arthur Tiutenko.

  15. Trachylepis maculilabris; 16. T. notabilis.  
17. Trachylepis occidentalis; 18. T. ovahelelo, sp. nov.; 19. T. suzanae, sp. nov.; 20. T. punctulata; 21. T. raymondlaurenti.  
 22. T. vunongue, sp. nov.; 23. T. sulcata; 24. T. wahlbergi; 25. T. wilsoni, sp. nov. 
Drawings by Arthur Tiutenko.



Luis M. P. Ceríaco, Mariana P. Marques, Diogo Parrinha, Arthur Tiutenko,  Jeffrey L. Weinell, Brett O. Butler and Aaron M. Bauer. 2024. The Trachylepis (Squamata: Scincidae) of Angola : An Integrative Taxonomic Review with the Description of Seven New Species. Bulletin of the American Museum of Natural History. 465. hdl.handle.net/2246/7345

  

Monday, April 29, 2024

[Herpetology • 2020] Eutropis caraga, E. lapulapu, E. sibalom, etc. • Taxonomic Revision of Philippine Sun Skinks (Squamata: Scincidae: Eutropis), and Descriptions of Eight New Species


(A-B) Eutropis caraga
(C) E. borealis, (D) E. palauensis and 
(E–F) E. islamaliit  
Barley, Diesmos, Siler, Martinez & Brown, 2020

Photos by Rafe M. Brown except (D) by Thibaud Aronson.

Abstract 
Species descriptions of reptiles historically have relied exclusively on the use of morphological data; however, these external, phenotypic data do not always co-vary with lineage divergence. Consequently, it has become increasingly clear that species diversity has been underestimated in many evolutionary radiations. With the use of an integrative approach, we examined the genetic and morphological diversity present in a nearly endemic Philippine radiation of Eutropis. Results demonstrated that current taxonomy does not reflect evolutionary history and that in many cases, morphological divergence has become decoupled from genetic divergence. As a consequence, species diversity is significantly underestimated. Here, we rectify the major taxonomic problems present in Philippine Eutropis by providing formal descriptions for eight new species. Three of the four new species in the E. multicarinata species complex are sympatric with (and have long been confused with) previously described subspecies (which we also elevate to full species here). The fourth species is endemic to the Caroline Islands, clearly derived from a long-distance dispersal event from the Philippines. The new species in the E. indeprensa species complex are allopatrically or parapatrically distributed across the archipelago. In contrast to the last review of Philippine Eutropis, which suggested the endemic radiation was composed of five species (one of which was composed of two subspecies), we demonstrate that this group includes at least 14 distinct evolutionary lineages, with potential for additional diversity to be discovered pending further study.

KEYWORDS: Cryptic species diversity, Eutropis borealis comb. nov., Eutropis caraga sp. nov., Eutropis cuprea sp. nov., Eutropis gubataas sp. nov., Eutropis islamaliit sp. nov., Eutropis lapulapu sp. nov., Eutropis multicarinata comb. nov., Eutropis palauensis sp. nov., Eutropis sahulinghangganan sp. nov., Eutropis sibalom sp. nov., Island archipelagos, lizard, Mabuya, morphology, Southeast Asia

Photos of species in the Eutropis multicarinata complex:
E. caraga from (A) Mount Lumot and (B) the Zamboanga Peninsula, Mindanao Island,
(C) E. borealis from the Visayan Islands (Siquijor Island), (D) E. palauensis (Ngarchelong, Palau),
and E. islamaliit from Lubang Island (E–F, KU 304013, an adult female, SVL = 79 mm).
Photos by Rafe M. Brown except (D) by Thibaud Aronson.

Eutropis borealis comb. nov., 
Eutropis caraga sp. nov., 
Eutropis cuprea sp. nov., 
Eutropis gubataas sp. nov., 
Eutropis islamaliit sp. nov., 
Eutropis lapulapu sp. nov., 
Eutropis multicarinata comb. nov., 
Eutropis palauensis sp. nov., 
Eutropis sahulinghangganan sp. nov., 
Eutropis sibalom sp. nov.


Anthony J. Barley, Arvin C. Diesmos, Cameron D. Siler, Christopher M. Martinez and Rafe M. Brown. 2020. Taxonomic Revision of Philippine Sun Skinks (Reptilia: Squamata: Scincidae: Eutropis), and Descriptions of Eight New Species. Herpetological Monographs. 34(1); 39-70. DOI: 10.1655/HERPMONOGRAPHS-D-19-00009.1

Wednesday, April 17, 2024

[Herpetology • 2024] Morphological and Genetic Data challenge Species and Subspecies in the Lerista microtis group (Squamata: Scincidae)

 

Morphological and Genetic Data challenge Species and Subspecies in the Lerista microtis group (Squamata: )

in Farquhar, Prates, Doughty, Rabosky et Chapple, 2024.

Abstract
The subspecies rank has been widely applied by taxonomists to capture infraspecific variation within the Linnaean classification system. Many subspecies described throughout the 20th century were recognised largely based on perceived variation in single morphological characters yet have since been found not to correspond to separately evolving population lineages, thus requiring synonymy or elevation to full species under lineage-based views of species. These modern lineage-based taxonomic resolutions have resulted from a combination of new molecular genetic techniques, improved geographical sampling of specimens, and more sophisticated analyses of morphological variation (e.g., statistical assessments rather than solely univariate descriptive ones). Here, we revisit the current taxonomic arrangement of species-level and subspecific taxa in the Lerista microtis (Gray) group, which is distributed along a narrow ~2000 km strip on the southern coast of Australia. From specimens of the L. microtis group, an additional species (Lerista arenicola) and two additional subspecies (L. m. intermedia and L. m. schwaneri) were described. We collected data on mensural, meristic, and colour pattern characters to explore morpho-spatial relationships among these taxa. Although our morphological analyses revealed some distinctiveness among specimens from locations assigned to each taxon, this variation is continuous along Australia’s southern coastline, assuming the form of a geographic cline rather than discrete forms. For many characters, however, spatial patterns were inconsistent with the original descriptions, particularly of the subspecies. Moreover, analysis of genome wide restriction-associated DNA loci revealed multiple instances of paraphyly among taxa, with phylogenetic clustering of specimens assigned to distinct species and subspecies. These emerging patterns provide no support for L. arenicola as a species evolving separately from L. microtis. Additionally, our findings challenge the presumed distinctiveness and coherence of the three subspecies of L. microtis. We thus synonymise L. arenicola and the L. microtis subspecies with L. microtis and provide a redescription of a single yet morphologically variable species—an arrangement that best reflects evolutionary history and the continuous nature of morphological variation across space.

Squamata, Australia, clinal variation, colour pattern, mitochondrial and nuclear DNA, Reptilia, south-coast five-toed slider, subspecies, taxonomy


 Lerista microtis


Jules E. Farquhar, Ivan Prates, Paul Doughty, Daniel L. Rabosky and David G. Chapple. 2024. Morphological and Genetic Data challenge Species and Subspecies in the Lerista microtis group (Squamata: Scincidae).  Zootaxa. 5437(3); 336-362. DOI: 10.11646/zootaxa.5437.3.2

 

Sunday, March 31, 2024

[Herpetology • 2024] Scincella ouboteri • A New Skink of the Genus Scincella Mittleman, 1950 (Squamata: Scincidae) from Hoa Binh Province, northern Vietnam

 
Scincella ouboteri
A. V. Pham, C. T. Pham, Le, Ngoc, Ziegler & Nguyen, 2024

Ouboter’s Smooth Skink | Thằn lằn cổ ouboter  ||  DOI: 10.11646/zootaxa.5428.1.4
 
Abstract
A new species of the genus Scincella Mittleman, 1950 is described from northern Vietnam based on morphological and molecular evidence. Scincella ouboteri sp. nov. is characterized by a combination of the following characters: Size medium (SVL up to 58.6 mm); primary temporals 2; external ear opening present, with 3 or 4 lobules on anterior margin; loreals 2; supralabials 7; infralabials 6 or 7; nuchals in 2–4 pairs; midbody scales in 30–32 rows; dorsal scales smooth, in 6 rows across the back; paravertebral scales 65–73, not widened; ventral scales in 65–71 rows; 10–12 smooth lamellae beneath finger IV and 18–20 beneath toe IV; toes overlapping fingers when limbs adpressed along body; dorsal surface of body and tail bronze-brown with a black vertebral stripe, in width of two dorsal scales, two bright dorsolateral stripes extending from behind the head to middle of tail, a dark stripe running from nostril to eye and extending from posterior margin of eye along upper part of flank and tail. In phylogenetic analyses, the new species and S. ochracea form an independent lineage sister to all other congeners included in the study.

Reptilia, Scincella ouboteri sp. nov., COI, molecular phylogeny, morphology, taxonomy
 
 Holotype of Scincella ouboteri sp. nov. (IEBR 5042) in life
 Photos: T.Q. Nguyen.

Scincella ouboteri sp. nov. 

Etymology. We name the new species in honor of Dr. Paul E. Ouboter, Institute for Neotropical Wildlife and Environmental Studies ( Suriname), who provided the first comprehensive taxonomic revision of the genus Scincella of Asia. As common names, we suggest Ouboter’s Smooth Skink (English) and Thằn lằn cổ ouboter (Vietnamese).


Anh Van Pham, Cuong The Pham, Minh Duc Le, Hai Ngo Ngoc, Thomas Ziegler and Truong Quang Nguyen. 2024. A New Skink of the Genus Scincella Mittleman, 1950 (Squamata: Scincidae) from Hoa Binh Province, northern Vietnam.  Zootaxa. 5428(1); 91-106. DOI: 10.11646/zootaxa.5428.1.4

Wednesday, January 24, 2024

[Herpetology • 2024] Papuascincus eldorado & P. borealisGold in the Mountains: Striking New Species of Papuascincus (Scincidae: Sphenomorphini) from New Guinea

  

Papuascincus eldorado
Slavenko, Richards, Donnellan, Allison & Oliver, 2024

 
Abstract
Skinks are the most diverse component of the reptile fauna in the mountains of New Guinea and many seemingly specialised high-elevation species remain undescribed. Here we describe two spectacular new gold-patterned skinks in the montane-specialist genus Papuascincus. Both species can be diagnosed from all congeners by their distinctive colouration, in addition to aspects of scalation and body size. One new species [Papuascincus eldorado sp. nov.] is mainly recorded from lower montane forest in karst habitats spanning more than five hundred kilometres along the southern edge of New Guinea’s Central Cordillera and is likely to warrant an IUCN conservation status of Least Concern. The second new species [Papuascincus borealis sp. nov.] has thus far only been recorded from cloud forest on the summit of Mt. Menawa in the North Coastal Ranges and we suggest it should be considered Data Deficient. However, if further survey work confirms a restricted distribution with little scope for upslope elevational retreat under future warming climates it will likely qualify for Endangered or Critically Endangered status.

Keywords: Central Cordillera, elevational endemism, karst, montane forest, North Coastal Mountains, Palaia

Photos in life of Papuascincus eldorado sp. nov.:
A holotype (QM J97880) from P’nyang, Western Province; B paratype (BPBM 21669) from Aseki, Morobe Province;
C paratype (SAMA R.71758) from Benaria, Hela Province; D paratype (SAMA R.57046) from Gobe, Southern Highlands Province;
E–F uncollected specimen from Moran, Hela Province.
Image A by Paul M. Oliver, image B by Allen Allison, images C and D by Stephen J. Richards, images E and F by Mark O’Shea.

Papuascincus eldorado sp. nov.

Diagnosis: A species of Papuascincus characterised by the unique combination of small size (maximum adult SVL 48.6 mm); 2–3 small rounded lobules on anterior edge of ear opening; supralabials seven; scale rows at midbody 24–28; postsuboculars typically two; paravertebral scales 43–50; lamellae under 4th toe 22–29; single supradigital scales on 4th toe 11–14; and dorsal colour pattern on body consisting of three greenish-gold dorsal stripes on a glossy black background; tail gold with scattered black flecks; limbs black with gold flecking.

Etymology: From the Spanish noun phrase meaning “the golden”, in reference to the species’ distinct golden colouration.

Photos in life of Papuascincus borealis sp. nov.:
A holotype (BPBM 23059); B paratype (BPBM 23061); C paratype (BPBM 23016), all from Mt. Menawa, Sandaun (Sepik) Province.
 Images by Allen Allison.

Papuascincus borealis sp. nov.

Diagnosis: A species of Papuascincus characterised by the unique combination of large size (maximum adult SVL 58.2 mm); 2–3 small rounded lobules on anterior edge of ear opening; postsuboculars typically three; scale rows at midbody 26–28; paravertebral scales 46–47; lamellae under 4th toe 20–25; single supradigital scales on 4th toe 14–15; dorsal colour pattern on body consisting of three yellow-gold dorsal stripes on a black background; tail gold with diffuse black speckling not extending more than 10 mm along tail; limbs black with gold flecking.

Etymology: Masculine Latin adjective meaning “northern”, in reference to the species’ distribution on the Bewani Mountains, the most northerly location of any known species of Papuascincus.


Alex Slavenko, Stephen J. Richards, Stephen C. Donnellan, Allen Allison and Paul M. Oliver. 2024. Gold in the Mountains: Striking New Species of Papuascincus (Sphenomorphini: Scincidae) from New Guinea. Vertebrate Zoology. 74: 133-149. DOI: 10.3897/vz.74.e112782