JP2022516988A - デイノコッカス属細菌由来ナノ小胞及びその用途 - Google Patents
デイノコッカス属細菌由来ナノ小胞及びその用途 Download PDFInfo
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Abstract
Description
(a)正常ヒト及び被検者のサンプルから分離した小胞からDNAを抽出する段階;
(b)前記抽出したDNAに対して16S rDNAに存在する遺伝子配列に基づいて作製したプライマーペアを用いてPCRを行った後、それぞれのPCR産物を取得する段階;及び
(c)前記PCR産物の定量分析を通じて正常ヒトに比べてデイノコッカス属細菌由来小胞の含量が低い場合、癌、炎症疾患、又は認知症に分類する段階。
(a)正常ヒト及び被検者のサンプルから分離した小胞からDNAを抽出する段階;
(b)前記抽出したDNAに対して16S rDNAに存在する遺伝子配列に基づいて作製したプライマーペアを用いてPCRを行った後、それぞれのPCR産物を取得する段階;及び
(c)前記PCR産物の定量分析を通じて正常ヒトに比べてデイノコッカス属細菌由来小胞の含量が低い場合、癌、炎症疾患、又は認知症と判定する段階。
(a)正常ヒト及び被検者のサンプルから分離した小胞からDNAを抽出する段階;
(b)前記抽出したDNAに対して16S rDNA塩基配列に基づいて作製したプライマーペアを用いてPCRを行った後、それぞれのPCR産物を取得する段階;及び
(c)前記PCR産物の定量分析を通じてデイノコッカス属細菌由来小胞の含量が低い場合、癌、炎症疾患、又は認知症に分類する段階。
細菌と細菌由来小胞が胃腸管を通じて全身的に吸収されるかを評価するために、下記のような方法で実験を行った。まず、マウスの胃腸に蛍光で標識した前記細菌と前記細菌由来小胞をそれぞれ50μgの用量で胃腸管に投与し、0分、5分、3時間、6時間、12時間後に蛍光を測定した。マウス全体イメージを観察した結果、図1aに示されたように、細菌の場合には、全身的に吸収されなかったが、細菌由来小胞の場合には、投与後5分に全身的に吸収され、投与3時間後には、膀胱で蛍光が濃く観察されて、小胞が泌尿器系に排泄されることが分かり、また、小胞は、投与12時間まで体内に存在することが分かった(図1a参照)。
細菌と細菌由来小胞が粘膜防御膜を通過して組織に浸潤されるかを評価するために、細菌と細菌由来小胞を腸に直接投与した後、免疫組織化学(Immunohistochemistry)方法で粘膜防御膜を通過して腸組織への浸潤を評価した。粘膜組織で細菌と小胞存在を評価するために、細菌と小胞に対する抗体を作製してGFP(Green fluorescent protein)を付けて使用し、DAPI(4,6-diamidino 2-phenylindole)染色をした後、顕微鏡で観察した。
血液をまず10mlチューブに入れ、遠心分離法(3,500×g、10min、4℃)で浮遊物を沈殿させ、上澄み液のみを新しい10mlチューブに移した。0.22μmフィルターを使用して細菌及び異物を除去した後、セントリプレップチューブ(遠心フィルター 50kD)に移して1500×g、4℃で15分間遠心分離して、50kDより小さい物質は捨て、10mlまで濃縮させた。さらに、0.22μmフィルターを使用してバクテリア及び異物を除去した後、Type 90tiローターで150,000×g、4℃で3時間超高速遠心分離方法を使用して上澄み液を捨て、固まったペレットを生理食塩水(PBS)で溶かした。
実施例3の方法で胃癌患者87人、そして年齢と性別をマッチングした正常ヒト91人の血液を対象として、血液内に存在する小胞から遺伝子を抽出してメタゲノム解析を行った後、デイノコッカス属細菌由来小胞の分布を評価した。その結果、正常ヒトの血液に比べて胃癌患者の血液でデイノコッカス属細菌由来小胞が有意に減少していることを確認した(図3参照)。
実施例3の方法で喘息患者132人と年齢と性別をマッチングした正常ヒト109人の血液を対象として、血液内に存在する小胞から遺伝子を抽出してメタゲノム解析を行った後、デイノコッカス属細菌由来小胞の分布を評価した。その結果、正常ヒトの血液に比べて喘息患者の血液でデイノコッカス属細菌由来小胞が有意に減少していることを確認した(図4参照)。
実施例3の方法で認知症患者82人と年齢と性別をマッチングした正常ヒト99人の血液を対象として、血液内に存在する小胞から遺伝子を抽出してメタゲノム解析を行った後、デイノコッカス属細菌由来小胞の分布を評価した。その結果、正常ヒトの血液に比べて認知症患者の血液でデイノコッカス属細菌由来小胞が有意に減少していることを確認した(図5参照)。
デイノコッカス・ラジオデュランス菌株を培養した後、その小胞を分離して、特性を分析した。デイノコッカス・ラジオデュランス菌株を37℃培養器で吸光度(OD 600)が1.0~1.5になるまでMRS(de Man-Rogosa and Sharpe)培地で培養した後、LB(Luria-Bertani)培地にサブカルチャーした。以後、菌株が含まれている培養液を回収して10,000×g、4℃で20分間遠心分離して菌体を除去し、0.22μmフィルターに濾過した。濾過した上澄み液を100kDa Pellicon 2 Cassetteフィルターメンブレン(Merck Millipore,US)でMasterFlex pump system(Cole-Parmer,US)を用いて微細濾過(microfiltration)を通じて50ml以下の体積に濃縮した。濃縮させた上澄み液をさらに0.22μmフィルターで濾過した後、BCA(Bicinchoninic acid)アッセイを用いてタンパク質を定量し、得られた小胞に対して下記実験を実施した。
デイノコッカス・ラジオデュランス由来小胞の抗炎症効果を評価するために、多様な濃度(0.1、1、10μg/ml)のデイノコッカス・ラジオデュランス由来小胞(D.radiodurans EV)をマウスマクロファージ細胞株に12時間前処理した後、病原性原因因子である大腸菌由来小胞1μg/mlを処理し、12時間後に炎症性サイトカインの分泌をELISAで測定した。
脳由来神経栄養因子(Brain-derived neurotrphic factor,BDNF)は、神経細胞の損傷時に神経細胞を保護する主なメディエーターであって、認知症、うつ病、アルツハイマー病、及び自閉症等で発現が減少している。本実施例では、デイノコッカス・ラジオデュランス由来小胞の脳神経疾患に対する治療効果を評価するために、神経細胞にストレスホルモンを処理して神経細胞保護効果を評価した。すなわち、神経細胞(hippocampal neuronal cell line,HT22 cells)を副腎皮質ホルモン(GC:corticosterone 400 ng/ml)又はデイノコッカス・ラジオデュランス由来小胞(EV、20μg/ml)とともに24時間体外で培養した後、BDNF発現をPCR方法で評価した。
Claims (24)
- 下記の段階を含む、癌、炎症疾患、又は認知症の診断のための情報提供方法:
(a)正常ヒト及び被検者のサンプルから分離した小胞からDNAを抽出する段階;
(b)前記抽出したDNAに対して16S rDNAに存在する遺伝子配列に基づいて作製したプライマーペアを用いてPCR(Polymerase Chain Reaction)を行った後、それぞれのPCR産物を取得する段階;及び
(c)前記PCR産物の定量分析を通じて正常ヒトに比べてデイノコッカス(Deinococcus)属細菌由来小胞の含量が低い場合、癌、炎症疾患、又は認知症に分類する段階。 - 前記(a)段階でのサンプルは、血液であることを特徴とする、請求項1に記載の情報提供方法。
- 前記癌は、胃癌、肺癌、すい臓癌、胆管癌、乳癌、膀胱癌、肝臓癌、卵巣癌、腎臓癌、前立腺癌、大腸癌、頭頸部癌、及びリンパ腫よりなる群から選ばれた1つ以上であることを特徴とする、請求項1に記載の情報提供方法。
- 前記炎症疾患は、歯肉炎、歯周炎、胃炎、炎症性腸炎、大腸炎、アトピー皮膚炎、にきび、脱毛、乾癬、鼻炎、鼻ポリープ、喘息、慢性閉塞性肺疾患(COPD)、退行性関節炎、及び関節リウマチよりなる群から選ばれた1つ以上であることを特徴とする、請求項1に記載の情報提供方法。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む、癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の予防又は治療用薬学的組成物。
- 前記癌は、胃癌、肺癌、すい臓癌、胆管癌、乳癌、膀胱癌、肝臓癌、卵巣癌、腎臓癌、前立腺癌、大腸癌、頭頸部癌、及びリンパ腫よりなる群から選ばれた1つ以上であることを特徴とする、請求項5に記載の薬学的組成物。
- 前記炎症疾患は、歯肉炎、歯周炎、胃炎、炎症性腸炎、大腸炎、アトピー皮膚炎、にきび、脱毛、乾癬、鼻炎、鼻ポリープ、喘息、慢性閉塞性肺疾患(COPD)、退行性関節炎、及び関節リウマチよりなる群から選ばれた1つ以上であることを特徴とする、請求項5に記載の薬学的組成物。
- 前記炎症疾患は、インターロイキン-6(Interleukin-6、IL-6)又は腫瘍壊死因子アルファ(Tumor necrosis factor-α、TNF-α)により媒介される疾患であることを特徴とする、請求項5に記載の薬学的組成物。
- 前記脳神経疾患は、うつ病、強迫性障害、統合失調症、認知症、アルツハイマー病、てんかん、自閉症、及びパーキンソン病よりなる群から選ばれた1つ以上であることを特徴とする、請求項5に記載の薬学的組成物。
- 前記小胞は、平均直径が10~200nmであることを特徴とする、請求項5に記載の薬学的組成物。
- 前記小胞は、デイノコッカス属細菌から自然的又は人工的に分泌されることを特徴とする、請求項5に記載の薬学的組成物。
- 前記デイノコッカス属細菌由来小胞は、デイノコッカス・ラジオデュランス(Deinococcus radiodurans)から分泌されることを特徴とする、請求項5に記載の薬学的組成物。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む、癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の予防又は改善用食品組成物。
- 前記小胞は、平均直径が10~200nmであることを特徴とする、請求項13に記載の食品組成物。
- 前記小胞は、デイノコッカス属細菌から自然的又は人工的に分泌されることを特徴とする、請求項13に記載の食品組成物。
- 前記デイノコッカス属細菌由来小胞は、デイノコッカス・ラジオデュランス(Deinococcus radiodurans)から分泌されることを特徴とする、請求項13に記載の食品組成物。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む、癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の予防又は治療用吸入剤組成物。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む、炎症性皮膚疾患の予防又は改善用化粧料組成物。
- 前記炎症性皮膚疾患は、アトピー皮膚炎、にきび、脱毛、及び乾癬よりなる群から選ばれた1つ以上であることを特徴とする、請求項18に記載の化粧料組成物。
- 下記の段階を含む、癌、炎症疾患、又は認知症の診断方法:
(a)正常ヒト及び被検者のサンプルから分離した小胞からDNAを抽出する段階;
(b)前記抽出したDNAに対して16S rDNAに存在する遺伝子配列に基づいて作製したプライマーペアを用いてPCR(Polymerase Chain Reaction)を行った後、それぞれのPCR産物を取得する段階;及び
(c)前記PCR産物の定量分析を通じて正常ヒトに比べてデイノコッカス(Deinococcus)属細菌由来小胞の含量が低い場合、癌、炎症疾患、又は認知症と判定する段階。 - 前記(a)段階でのサンプルは、血液であることを特徴とする、請求項20に記載の診断方法。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む薬学的組成物を個体に投与する段階を含む、癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の予防又は治療方法。
- デイノコッカス(Deinococcus)属細菌由来小胞を有効成分として含む薬学的組成物の癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の予防又は治療用途。
- デイノコッカス(Deinococcus)属細菌由来小胞の、癌、炎症疾患、及び脳神経疾患よりなる群から選ばれた1つ以上の疾患の治療に用いられる薬剤を生産するための用途。
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WO2018111028A1 (ko) * | 2016-12-16 | 2018-06-21 | 주식회사 엠디헬스케어 | 세균 메타게놈 분석을 통한 심장질환 진단방법 |
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WO2018155967A1 (ko) * | 2017-02-24 | 2018-08-30 | 주식회사 엠디헬스케어 | 세균 메타게놈 분석을 통한 만성폐쇄성기도질환 진단 방법 |
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