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10.5555/1699872guideproceedingsBook PagePublication PagesConference Proceedingsacm-pubtype
ISBI'09: Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
2009 Proceeding
Publisher:
  • IEEE Press
Conference:
Boston Massachusetts USA 28 June 2009- 1 July 2009
ISBN:
978-1-4244-3931-7
Published:
28 June 2009

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Abstract

No abstract available.

Article
Evaluation of level set-based histology image segmentation using geometric region criteria
Pages 1–4

There is a great deal of interest in developing automated histological grading of tissue biopsies. Current approaches involve sophisticated algorithms for image segmentation, tissue architecture characterization, global texture feature extraction, and ...

Article
Atlas-based deformable mutual population segmentation
Pages 5–8

Segmentation is one of the most critical problems in medical imaging. State-of-the art methods often are based on prior knowledge that can either encode geometry, appearance or both. Despite enormous work in the field, the mainstream is based on the ...

Article
A Delaunay triangulation approach for segmenting clumps of nuclei
Pages 9–12

Cell-based fluorescence imaging assays have the potential to generate massive amount of data, which requires detailed quantitative analysis. Often, as a result of fixation, labeled nuclei overlap and create a clump of cells. However, it is important to ...

Article
A new unconstrained iris image analysis and segmentation method in biometrics
Pages 13–16

Iris recognition remains the most viable and reliable biometric method for security purposes. With the increasing demands in public safety and security, iris identification is becoming a requisite that seeks high accuracy with a fast and reliable ...

Article
Robust segmentation of brain structures in MRI
Pages 17–20

A novel method for the segmentation of brain structures combining registration-based and EM-based approaches is proposed. To address the issue of intensity variation within brain structures, we propose a method for creating spatial prior corresponding ...

Article
Atlas-based registration parameters in segmenting sub-cortical regions from brain MRI-images
Pages 21–24

Multi-atlas segmentation has been proved to perform well in segmenting sub-cortical structures from images. In this work, we study different components of multi-atlas segmentation and propose new techniques to improve the segmentation accuracy. We found ...

Article
Improved semi-automated segmentation of cardiac CT and MR images
Pages 25–28

This paper presents a semi-automated segmentation method for short-axis cardiac CT and MR images. The main contributions of this work are: 1) using two different energy functionals for endocardium and epicardium segmentation to account for their ...

Article
Volumetric segmentation of multiple basal ganglia structures using nonparametric coupled shape and inter-shape pose priors
Pages 29–32

We present a new active contour-based, statistical method for simultaneous volumetric segmentation of multiple subcortical structures in the brain. Neighboring anatomical structures in the human brain exhibit co-dependencies which can aid in ...

Article
Hybrid deformable model for aneurysm segmentation
Pages 33–36

Automatic extraction of aortic aneurysm thrombus is a nontrivial challenge for existing segmentation algorithms. Due to similar intensity, the boundary to surrounding tissue is characterized by a small gradient. On the other hand, the aneurysm contains ...

Article
Interactive polygons in region-based deformable contours for medical images
Pages 37–40

A new user interaction method called interactive polygons is presented in this paper. These interaction polygons are designed for use with the Active Volume Model segmentation method [1], which deforms with constraints from both Region Of Interest (ROI) ...

Article
A new interactive method for coronary arteries segmentation based on tubular anisotropy
Pages 41–44

In this paper we present a new interactive method for tubular structure extraction. The main application and motivation for this work is vessel tracking in 3D medical images. The basic tools are minimal paths solved using the fast marching algorithm. ...

Article
Fast medical image segmentation through an approximation of narrow-band B-spline level-set and multiresolution
Pages 45–48

We have recently proposed a new level-set formulation, where the level-set is modelled as a continuous parametric function expressed in a B-spline basis. We propose in this paper to adapt this formalism to the class of narrow-band level-set methods, ...

Article
Graph-based knowledge-driven discrete segmentation of the left ventricle
Pages 49–52

In this paper, we propose a novel similarity-invariant approach to model-based segmentation of the left ventricle. The method assumes a control point representation of the model and an arbitrary interpolation strategy. First, we construct the prior ...

Article
Bayesian co-segmentation of multiple MR images
Pages 53–56

Segmentation is one of the basic problems in MRI analysis. We consider the problem of simultaneously segmenting multiple MR images, which, for example, could be a series of (2D/3D) images of the same tissue scanned over time, different slices of a ...

Article
Estimation of oxygen tension in retinal capillaries from phosphorescence lifetime images
Pages 57–60

Investigating the effect of retinal oxygenation abnormalities in the development of common eye diseases requires accurate assessment of oxygen tension in retinal vasculatures. Estimation of oxygen tension in retinal capillaries using phosphorescence ...

Article
Automated detection of drusen in the macula
Pages 61–64

Age related macular degeneration (AMD) is a condition of the retina that occurs with individuals over 50. AMD is characterized by the formation of drusen in the macula. This condition leads to a deterioration of foveal vision and eventually functional ...

Article
Characterizing time-intensity curves for spectral morphometric analysis of intratumoral enhancement patterns in breast DCE-MRI: comparison between differentiation performance of temporal model parameters based on DFT and SVD
Pages 65–68

This study was designed to characterize the spatio-temporal properties of intratumoral enhancement patterns by using voxel-wise temporal enhancement spectra and morphometry of their spatial distributions in dynamic contrast-enhanced (DCE) breast MRI. ...

Article
Robust estimation of pharmacokinetic parameters in DCE-MRI analysis of rectal tumours
Pages 69–72

Dynamic contrast-enhanced (DCE) MRI is a powerful tool for assessing tumour vasculature and for predicting patient response to therapy. DCE-MRI data can be quantified using pharmacokinetic models, allowing extraction of physiologically meaningful ...

Article
Prostate cancer localization with multispectral MRI based on relevance vector machines
Pages 73–76

Prostate cancer is one of the leading causes of cancer death for men. However, early detection before cancer spreads beyond the prostate can reduce the mortality. Therefore, invivo imaging techniques play an important role to localize the prostate ...

Article
A knowledge representation framework for integration, classification of multi-scale imaging and non-imaging data: preliminary results in predicting prostate cancer recurrence by fusing mass spectrometry and histology
Pages 77–80

The demand for personalized health care requires a wide range of diagnostic tools for determining patient prognosis and theragnosis (response to treatment). These tools present us with data that is both multi-modal (imaging and non-imaging) and multi-...

Article
Detection of clustered microcalcifications using spatial point process modeling
Pages 81–84

We propose a spatial point process approach to improve the detection accuracy of clustered microcalcifications (MCs) in mammogram images. The conventional approach to MC detection has been to first detect the individual MCs in an image independently, ...

Article
A pilot study evaluating pulmonary nodule marking methods
Pages 85–88

Assessing the precision in the estimation of lesion dimensions is a prerequisite for the determination of growth rates and response to therapy both in clinical practice and research. An initial study was designed and performed to evaluate three ...

Article
False positive reduction in CT colonography using spectral compression and curvature tensor smoothing of surface geometry
Pages 89–92

Existing polyp detection methods rely heavily on curvature-based characteristics to differentiate between lesions. However, as curvature is a local feature and a second order differential quantity, noise caused by small bumpy structures and incoherent ...

Article
Texture-based characterization of arterialization in simulated MRI of hypervascularized liver tumors
Pages 93–96

The use of quantitative imaging for the characterization of hepatic tumors in MRI can improve the diagnosis and therefore the treatment. However, image parameters remain difficult to interpret because they result from a mixture of complex processes ...

Article
A framework for automated tumor detection in thoracic FDG PET images using texture-based features
Pages 97–100

This paper proposes a novel framework for tumor detection in Positron Emission Tomography (PET) images. A set of 8 second-order texture features obtained from the gray level co-occurrence matrix (GLCM) across 26 offsets, together with uptake value was ...

Article
Adaptive total variation based filtering for MRI images with spatially inhomogeneous noise and artifacts
Pages 101–104

The widely adopted total variation (TV) filter is not optimal for MRI images with spatially varying noise levels, not to say those with also artifacts. To better preserve edges and fine structures while sufficiently removing noise and artifacts, we ...

Article
Template-based reconstruction of human extraocular muscles from magnetic resonance images
Pages 105–108

Understanding the mechanisms of eye movement is difficult without a realistic biomechanical model. We present an efficient and robust computational framework for building subject-specific models of the orbit from magnetic resonance images (MRIs). We ...

Article
Automatic segmentation of head structures on fetal MRI
Pages 109–112

Recent improvements of fetal MRI acquisitions now allow three-dimensional segmentation of fetal structures, to extract biometrical measures for pregnancy follow-up. Automation of the segmentation process remains a difficult challenge, given the ...

Article
3D eigenfunction expansion of sparsely sampled 2D cortical data
Pages 113–116

Various cortical measures such as cortical thickness are routinely computed along the vertices of cortical surface meshes. These metrics are used in surface-based morphometric studies. If one wishes to compare the surface-based morphometric studies to ...

Article
Efficient NUFFT algorithm for non-Cartesian MRI reconstruction
Pages 117–120

We recently introduced a family of optimized interpolators to approximate the non-uniform Fourier transform of a finitely supported function. Theoretical comparisons indicated a significant improvement in performance over conventional approximations. In ...

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