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Robust segmentation of brain structures in MRI

Published: 28 June 2009 Publication History

Abstract

A novel method for the segmentation of brain structures combining registration-based and EM-based approaches is proposed. To address the issue of intensity variation within brain structures, we propose a method for creating spatial prior corresponding very well with the new subject anatomy, referred to as subject-specific atlas. The subject-specific atlas is created using multiple non-rigid registrations with the new subject, and therefore a robust non-rigid alignment of the prior with the image is achieved. The final EM segmentation step ensures a good quality classification of the complicated cortical structures based on intensity. The evaluation of the proposed method shows consistent results superior to both, registration-based and EM-based approaches.

References

[1]
R.A. Heckermann, J.V. Hajnal, P. Aljabar, D. Rueckert, and A. Hammers, "Automatic anatomical brain MRI segmentation combining label propagation and decision fusion," NeuroImage, 2006.
[2]
K. Van Leemput, F. Maes, D. Vandermeulen, and P. Suetens, "Automated model-based bias field correction of MR images of the brain," IEEE Transactions on Medical Imaging, vol. 18, no. 10, pp. 885-896, 1999.
[3]
D. Rueckert, L.I. Sonoda, C. Hayes, D.L.G. Hill, M. O. Leach, and D. J. Hawkes, "Non-rigid registration using free-form deformations: Application to breast MR images," IEEE Transactions on Medical Imaging, vol. 18, no. 8, pp. 712-721, 1999.
[4]
J.G. Sled, A.P. Zijdenbos, and A.C. Evans, "A nonparametric method for automatic correction of intensity nonuniformity in MRI data," IEEE Transactions on Medical Imaging, vol. 17, no. 1, pp. 87-97, 1998.
[5]
M. Murgasova, J. Hajnal, S. Counsell, A. Edwards, and D. Rueckert, "Template-based bias correction: Application to paediatric brain MRI," in Proceedings 17th Scientific Meeting, International Society for Magnetic Resonance in Medicine, Honolulu, 2009, p. 4672.
[6]
L.R. Dice, "Measures of the amount of ecologic association between species.," Ecology, vol. 26, pp. 297-302, 1945.
[7]
Maria Murgasova, Leigh Dyet, David Edwards, Mary Rutherford, Jo Hajnal, and Daniel Rueckert, "Segmentation of brain MRI in young children," Academic Radiology, vol. 14, no. 11, pp. 1350-1366, 2007.

Cited By

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  • (2010)Simultaneous reconstruction of 40-D myocardial motion from both tagged and untagged MR images using nonrigid image registrationProceedings of the 5th international conference on Medical imaging and augmented reality10.5555/1929015.1929028(98-107)Online publication date: 19-Sep-2010
  • (2010)SPARCProceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro10.5555/1855963.1856183(856-859)Online publication date: 14-Apr-2010

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Information

Published In

cover image Guide Proceedings
ISBI'09: Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
June 2009
1405 pages
ISBN:9781424439317

Publisher

IEEE Press

Publication History

Published: 28 June 2009

Author Tags

  1. EM segmentation
  2. brain MRI
  3. registration
  4. segmentation
  5. structures

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View all
  • (2010)Simultaneous reconstruction of 40-D myocardial motion from both tagged and untagged MR images using nonrigid image registrationProceedings of the 5th international conference on Medical imaging and augmented reality10.5555/1929015.1929028(98-107)Online publication date: 19-Sep-2010
  • (2010)SPARCProceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro10.5555/1855963.1856183(856-859)Online publication date: 14-Apr-2010

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