Crops Disease Detection, from Leaves to Field: What We Can Expect from Artificial Intelligence
"> Figure 1
<p>Temporal dynamics of research trends in crop disease detection topics.</p> "> Figure 2
<p>Flowchart of the methodology for collecting data about plant disease identification using artificial intelligence and image data.</p> "> Figure 3
<p>Thematic clustering of the topics identified from the keywords as well as their temporal evolution based on data collected from 2000 to 2024. The node size of a topic is proportionate to its relative frequency.</p> "> Figure 4
<p>Thematic clustering of the topics identified from the keywords based on data collected from 2000 to 2024. The node size of a topic is proportionate to its relative frequency.</p> "> Figure 5
<p>Sankey diagram analysis of global research trends in crop disease detection using artificial intelligence and image processing for the period between 2000 and 2024.</p> ">
Abstract
:1. Introduction
1.1. Impact of Crop Diseases on Production and Agricultural Sector
1.2. Data Acquisition to Assess Crop Diseases
1.3. Data Analysis to Detect and Identify Crop Diseases
2. Methodology
2.1. Crop Disease Detection Systematic Search Approach (SSA)
2.2. Data Retrieval and Extraction
3. Results
3.1. Bibliometric Analysis
3.2. Analysis of Disease in the Literature
3.2.1. Study Scale
3.2.2. Crop and Disease
3.2.3. Acquisition Method and Data Source
3.2.4. Algorithm Used and Annotation Tools
3.3. Uses of the Data Acquired
4. Perspectives and Challenges
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Inclusion Criteria | Exclusion Criteria |
---|---|
2000–2024 | Before 2000 |
Peer-review and grey literature | Websites and project pages |
English | Beyond English |
Scopus | Other search engines |
Keywords: plant disease detection, artificial intelligence, image, sensing | Other plant disease biology-based detection methods |
Crop | Disease | Study Scale * | Acquisition Methods ** | Citations |
---|---|---|---|---|
Almond (Prunus amygdalus) | Leaf blotch (Polystigma ochraceum) | Leaves | UAV (RGB) | [52] |
Avocado (Persea americana) | Laurel wilt (Raffaelea lauricola); Phytophtora root rot (Phytophthora spp.) | Tree | Multispectral camera | [53] |
Apple (Malus domestica) | Alternaria leaf blotch (Alternaria spp.), Apple black spot (Venturia inaequalis), and apple leaf miner (Lyonetia clerkella) | Leaf, Tree | Photo (Plant Village) Own photo database (VIS) | [54,55,56,57,58] |
Asparagus (Asparagus officinalis) | Purple spot disease (Stemphylium vesicarium) | Plant | Photo (VIS & IR) and Satellite | [59] |
Banana (Musa) | Banana fusarium wilt (Fusarium oxysporum f. sp. cubense) | Plant | UAV | [60,61,62] |
Barley (Hordeum vulgare) | Powdery mildew (Blumeria graminis f. sp. hordei) | Leaf | RGB | [63] |
Bean (Phaseolus vulgaris) | Rust (Uromyces phaseoli var. typica) and Angular leaf spot (Pseudocercospora griseola) | Leaf | Photo (VIS) | [64,65] |
Cardamon (Elettaria cardamomum) | Colletotrichum Blight (Colletotrichum gloeosporioides) and Phyllosticta Leaf Spot (Phyllosticta capitalensis) | Leaves | Photo (VIS) | [66] |
Cassava (Manihot esculenta) | Brown leaf spot (Mycosphaerella henningsii), Red mite damage (Tetranychus urticae), Green mite damage (Mononychellus tanajoa), Cassava brown streak virus, Cassava mosaic virus | Leaf | Photo (VIS) Photo (Kaggle) | [67,68] |
Citrus | Citrus black spot (Phyllosticta citricarpa), Citrus bacterial canker (Xanthomonas citri subsp. Citri), Huanglongbing citrus greening (Candidatus Liberibacter asiaticus) | Leaves, Leaf | Photo (RGB) Hyperspectral | [69,70,71,72,73,74] |
Coffee (Coffea arabica) | Leaf miner (Leucoptera caffeine) and Rust (Hemileia vastatrix) | Leaves | UAV | [75] |
Cotton (Gossypium hirsutum) | Several | Leaf, Plants | Photo (VIS) Photo (Plant Village) UAV | [76,77,78,79] |
Cucumber (Cucumis sativus) | Several | Leaf | Photo (Plant Village) | [80] |
Durian (Durio zibethinus) | Several | Leaf | Photo (VIS) | [81] |
Eggplant (Solanum melongena) | Fruit rot, Alternaria leaf spot (Alternaria sp.), Little leaf of Brinjal (phytoplasma), Mosaic virus, Collar rot (Sclerotinia sclerotiorum) | Leaves, Fruit, Plant | Photo (VIS) | [82] |
Grapevine (Vitis vinifera) | Grapevine flavescence dorée phytoplasma, Yellows, Esca (Phaeomoniella chlamydospora, Phellinus punctatus, Fomitiporia mediterranea, Phaeoacremonium minimum), Downy mildew (Plasmopara viticola) | Leaves Leaf | RGB; Spectroradiometer Photo (in vitro) Photo (Plant Village) | [36,83,84,85,86,87] |
Guava (Psidium guajava L.) | Guava rust (Austropuccinia psidii), Scabby fruit canker (Pestalotia psidii), Mummy disease (Gloeosporium Psidii) | Fruits & Leaves | Photo (VIS) | [61,88] |
Maize (Zea mais L.) | Northern corn leaf blight (Exserohilum turcicum), Southern corn leaf blight (Bipolaris maydis), Common rust (Puccinia sorghi) | Leaf | Photo (VIS) | [89,90,91,92,93,94,95] |
Mango (Mangifera indica L.) | Sooty mould (Capnodium salicinum) | Leaf, Leaves | Photo (Plant Village, leaf snap) | [96,97,98] |
Melon (Cucumis melo L.) | Powdery mildew (Sphaerotheca fuliginea) | Leaves | Photo (VIS) UAV | [37,99] |
Mulberry (Morus nigra) | Leaf rust (Peridiospora mori) and Leaf spot (Mycosphaerella mori) | Leaf | Photo (VIS) | [100] |
Oil palm (Elaeis guineensis) | Basal stem rot of oil palm (Ganoderma boninense) | Leaf | Photo (VIS) FTIR and Raman spectroscopy | [8,101] |
Olive tree (Olea europaea) | Several | Leaf | Photo (VIS) | [102,103] |
Onion (Allium cepa L.) | Onion Smudge (Colletotrichum circinans) | Satellite (VIS-NIR) | [104,105] | |
Papaya (Carica papaya L.) | Begomovirus (Geminiviridae) | Leaf | NIR and FT-IR ATR | [106] |
Pea (Pisum sativum L.) | Rust disease (Uromyces viciae-fabae Pers. de-Bary) | Leaf | Microscopic images | [107] |
Peanuts (Arachis hypogaea) | Peanut stem rot (Athelia rolfsii) | Leaves | UV, VIS, NIR, Thermal | [108] |
Pepper (Capsicum spp.) | Pepper yellow leaf curl virus (PepYLClV), Several | Leaf, Pulp, Stem | FT-IR Photo (VIS, Plant Village + pepper diseased dataset) | [109,110,111,112,113] |
Pigeon pea (Cajanus cajan) | Fusarium wilt (Fusarium udum), Pigeonpea sterility mosaic virus (PPSMV), Ashy stem blight (Macrophomina phaseolina), Phytophthora blight (Phytophthora drechsleri f. sp. cajani) | Leaf | Photo (VIS) | [114] |
Plum (Prunus subg. Prunus) | Several | Leaves, Leaves & Fruit | Photo (VIS) | [115] |
Potato (Solanum tuberosum) | Early blight (Alternaria solani), Late blight of potato (Phytophthora infestans) | Leaf | Photo (Plant Village) | [116,117,118,119] |
Rapeseed (Brassica napus L.) | Sclerotinia stem rot (Sclerotinia sclerotiorum) | Leaves | Hyperspectral | [120] |
Rice (Oryza sativa) | Bacterial leaf blight (Xanthomonas oryzae pv. oryzae), Brown spot of rice (Cochliobolus miyabeanus), Tungrovirus oryzae, Entyloma oryzae (leaf smut of rice) | Leaves, Panicle | Photo (VIS) | [121,122,123,124,125,126,127,128,129,130] |
Rose (Rosa sp.) | Powdery mildew of rose (Podosphaera pannosa) and Gray mold of roses (Botrytis cinerea) | Leaf | Thermal and visible images | [131] |
Solanum | Blight (n.d.), several | Leaf | Photo (Plant Village) | [132,133,134] |
Soybean (Glycine max.) | Nematodes cyst nematode, Anthracnose of soybean (Colletotrichum truncatum) Wildfire (Pseudomonas syringae pv. tabaci) | Field, Pods, Leaves, | Satellite (hyperspectral) VIS+NIR | [135,136,137] |
Squash (Cucurbita) | Cucurbit powdery mildew (Podosphaera xanthii) | Plant | UAV (multispectral) | [138] |
Strawberry (Fragaria x ananassa) | Anthracnose (Colletotrichum fragariae), Gray mold of strawberries (Botrytis cinerea) | Leaf | Photo (VIS) Hyperspectral | [139,140,141] |
Sugar beet (Beta vulgaris) | Cercospora leaf spot (Cercospora beticola) | Plants | UAV | [19,142,143] |
Sugarcane (Saccharum officinarum) | Orange rust disease of sugarcane (Puccinia kuehnii), Sugarcane yellow leaf virus (ScYLV), Eye spot disease of sugarcane (Helminthosporium saccahari), Brown leaf spot of sugarcane (Cercospora longipies), Red rot of sugarcane (Colletotrichum falcatum) | Leaf | Photo (VIS) | [144,145] |
Tomato (Solanum lycopersicum) | 10 diseases, early blight (Alternaria solani), Tomato Spotted Wilt Virus (TSWV) | Leaf | Photo (Plant Village) Own database VIS + NIR Hyperspectral | [24,146,147,148,149,150,151,152,153,154,155] |
Green Tea (Camellia sinensis) | Blister blight of tea (Exobasidium vexans), Leafhopper, Caterpillars, Mosquito, Yellow mite | Leaf | Photo (VIS) | [156] |
Walnut (Juglans regia L.) | Diseased (n.d.) | Leaf | Photo (VIS) | [157] |
Wheat (Triticum aestivum L.) | Wheat stripe (yellow) rust (Puccinia striiformis f. sp. tritici), Wheatbrown rust (Puccinia triticina) Fusarium head blight (Fusarium graminearum) | Field, Spikes, Leaves | UAV VIS Hyperspectral + Fluorescence Photo (VIS) | [20,158,159,160,161,162,163,164,165,166,167] |
Tool | Source | Advantages/Constraints |
---|---|---|
LabelImg | https://github.com/heartexlabs/labelImg (accessed on 10 September 2024) | Python based, open-source, needs programming skills |
VGG Image Annotator (VIA) | https://www.robots.ox.ac.uk/~vgg/software/via/ (accessed on 10 September 2024) | Web-based tool, open-source, requires internet connection, some issues with large dataset |
Labelbox | https://labelbox.com/customers/genetech-customer-story/ (accessed on 10 September 2024) | Python based, commercial, complex feature set |
SLOTH | https://github.com/cvhciKIT/sloth (accessed on 10 September 2024) | Python based, open-source, not supported an all platforms, some issues with large dataset |
Hasty | https://hasty.ai/v2 (accessed on 10 September 2024) | Cloud Annotations GUI, Commercial, auto label function |
IBM Cloud Annotations Tool | https://developer.ibm.com/blogs/ibm-cloud-annotations-tool-eases-the-process-of-ai-data-labeling/ (accessed on 10 September 2024) | Cloud Annotations GUI, auto label function |
RectLabel | https://github.com/ryouchinsa/Rectlabel-support (accessed on 10 September 2024) | Support only Linux environment, commercial |
Labelme | https://developer.ibm.com/blogs/ibm-cloud-annotations-tool-eases-the-process-of-ai-data-labeling/ (accessed on 10 September 2024) | Python, based, open-source, some issues with large dataset |
Scale | https://scale.com/image (accessed on 10 September 2024) | Cloud Annotations GUI, auto label function, commercial |
SUPERVISELY | https://supervise.ly/ (accessed on 10 September 2024) | Cloud Annotations GUI, auto label function, commercial |
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© 2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Lebrini, Y.; Ayerdi Gotor, A. Crops Disease Detection, from Leaves to Field: What We Can Expect from Artificial Intelligence. Agronomy 2024, 14, 2719. https://doi.org/10.3390/agronomy14112719
Lebrini Y, Ayerdi Gotor A. Crops Disease Detection, from Leaves to Field: What We Can Expect from Artificial Intelligence. Agronomy. 2024; 14(11):2719. https://doi.org/10.3390/agronomy14112719
Chicago/Turabian StyleLebrini, Youssef, and Alicia Ayerdi Gotor. 2024. "Crops Disease Detection, from Leaves to Field: What We Can Expect from Artificial Intelligence" Agronomy 14, no. 11: 2719. https://doi.org/10.3390/agronomy14112719