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Soichi Ogishima
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2020 – today
- 2020
- [i2]Rutger A. Vos
, Toshiaki Katayama
BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000Research 9: 136 (2020)
2010 – 2019
- 2019
- [i1]Toshiaki Katayama
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. F1000Research 8: 1677 (2019) - 2017
- [j9]Takako Takai-Igarashi
Security controls in an integrated Biobank to protect privacy in data sharing: rationale and study design. BMC Medical Informatics Decis. Mak. 17(1): 100:1-100:12 (2017) - [j8]Sebastian Köhler, Nicole A. Vasilevsky
The Human Phenotype Ontology in 2017. Nucleic Acids Res. 45(Database-Issue): D865-D876 (2017) - 2015
- [j7]Hiromi Matsumae, Ryosuke R. Ishiwata
Detection of periodic patterns in microarray data reveals novel oscillating transcripts of biological rhythms in Ciona intestinalis. Artif. Life Robotics 20(4): 347-352 (2015) - [j6]Kiyoko F. Aoki-Kinoshita
Implementation of linked data in the life sciences at BioHackathon 2011. J. Biomed. Semant. 6: 3 (2015) - [c5]Soichi Ogishima, Takako Takai, Kazuro Shimokawa, Satoshi Nagaie, Hiroshi Tanaka, Jun Nakaya:
Integrated Database And Knowledge Base For Genomic Prospective Cohort Study In Tohoku Medical Megabank Toward Personalized Prevention And Medicine. MedInfo 2015: 1057 - 2014
- [j5]The Fantom Consortium, RIKEN PMII, RIKEN CLST (DGT), Alistair R. R. Forrest, Hideya Kawaji, Michael Rehli, J. Kenneth Baillie, Michiel J. L. de Hoon, Vanja Haberle, Timo Lassmann, Ivan V. Kulakovskiy, Marina Lizio, Masayoshi Itoh, Robin Andersson, Christopher J. Mungall, Terrence F. Meehan, Sebastian Schmeier, Nicolas Bertin, Mette Jørgensen, Emmanuel Dimont, Erik Arner, Christian Schmidl, Ulf Schaefer, Yulia A. Medvedeva
A promoter-level mammalian expression atlas. Nat. 507(7493): 462-470 (2014) - 2013
- [j4]Yousuke Nishio, Soichi Ogishima, Masao Ichikawa, Yohei Yamada, Yoshihiro Usuda, Tadashi Masuda, Hiroshi Tanaka:
Analysis of l-glutamic acid fermentation by using a dynamic metabolic simulation model of Escherichia coli. BMC Syst. Biol. 7: 92 (2013) - [c4]Mizuki Morita, Soichi Ogishima, Kunihiro Nishimura, Eiji Aramaki, Tateo Ito:
Online Population-Based Patient Registry to Collect and Share Health-related Data of Rare Disease Patients. AAAI Spring Symposium: Data Driven Wellness 2013 - [c3]Toshiaki Katayama, Masataka Kikuchi, Soichi Ogishima:
Interactive Platform for Semantic Gene Expression Analysis of Alzheimer's Disease. SWAT4LS 2013 - 2012
- [j3]Satoshi Mizuno, Risa Iijima, Soichi Ogishima, Masataka Kikuchi, Yukiko Matsuoka, Samik Ghosh, Tadashi Miyamoto, Akinori Miyashita, Ryozo Kuwano, Hiroshi Tanaka:
AlzPathway: a comprehensive map of signaling pathways of Alzheimer's disease. BMC Syst. Biol. 6: 52 (2012) - 2011
- [j2]Toshiaki Katayama, Mark D. Wilkinson
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011)
2000 – 2009
- 2009
- [j1]Ryosuke R. Ishiwata
BioCichlid: central dogma-based 3D visualization system of time-course microarray data on a hierarchical biological network. Bioinform. 25(4): 543-544 (2009) - 2001
- [c2]Fengrong Ren, Soichi Ogishima, Hiroshi Tanaka:
Inference and Prediction of Courses of the Diseases Caused by Pathologic Viruses by Estimating Molecular Evolution of Within-host Virus. MedInfo 2001: 979-983 - [c1]Fengrong Ren, Soichi Ogishima, Hiroshi Tanaka:
A New Algorithm for Analysis of Within-Host HIV-1 Evolution. Pacific Symposium on Biocomputing 2001: 595-605
Coauthor Index
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