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Dietmar Schomburg
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- affiliation: Braunschweig University of Technology, Germany
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2020 – today
- 2021
- [j41]Antje Chang
, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49(Database-Issue): D498-D508 (2021) - 2020
- [j40]Rachel Drysdale, Charles E. Cook
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences. Bioinform. 36(8): 2636-2642 (2020)
2010 – 2019
- 2019
- [j39]Lisa Jeske, Sandra Placzek, Ida Schomburg, Antje Chang, Dietmar Schomburg:
BRENDA in 2019: a European ELIXIR core data resource. Nucleic Acids Res. 47(Database-Issue): D542-D549 (2019) - 2018
- [c23]Rüdiger Busche
DISBi: A Flexible Framework for Integrating Systems Biology Data. DILS 2018: 97-102 - 2017
- [j38]Sandra Placzek, Ida Schomburg, Antje Chang, Lisa Jeske, Marcus Ulbrich, Jana Tillack, Dietmar Schomburg
BRENDA in 2017: new perspectives and new tools in BRENDA. Nucleic Acids Res. 45(Database-Issue): D380-D388 (2017) - 2015
- [j37]Antje Chang, Ida Schomburg, Sandra Placzek, Lisa Jeske, Marcus Ulbrich, Mei Xiao, Christoph W. Sensen
BRENDA in 2015: exciting developments in its 25th year of existence. Nucleic Acids Res. 43(Database-Issue): 439-446 (2015) - 2014
- [j36]Zeeshan Ahmed
'Isotopo' a database application for facile analysis and management of mass isotopomer data. Database J. Biol. Databases Curation 2014 (2014) - [c22]Jana Tillack, Melanie Bende, Michael Rother, Maurice Scheer, Susanne Ulas, Dietmar Schomburg:
Flexible database-assisted graphical representation of metabolic networks for model comparison and the display of experimental data. GCB 2014: 61-68 - 2013
- [j35]Zeeshan Ahmed
Software LS-MIDA for efficient mass isotopomer distribution analysis in metabolic modelling. BMC Bioinform. 14: 218 (2013) - [j34]S. Alexander Riemer, Rene Rex, Dietmar Schomburg
A metabolite-centric view on flux distributions in genome-scale metabolic models. BMC Syst. Biol. 7: 33 (2013) - [j33]Ida Schomburg, Antje Chang, Sandra Placzek, Carola Söhngen, Michael Rother, Maren Lang
BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA. Nucleic Acids Res. 41(Database-Issue): 764-772 (2013) - [j32]Rene Rex, Nelli Bill, Kerstin Schmidt-Hohagen, Dietmar Schomburg
Swimming in Light: A Large-Scale Computational Analysis of the Metabolism of Dinoroseobacter shibae. PLoS Comput. Biol. 9(10) (2013) - 2012
- [c21]Dietmar Schomburg, Edgar Wingender:
Bioinformatik & Bioinformation: Braunschweig spielt eine führende Rolle. 40 Jahre Informatik @ Braunschweig 2012: 164-171 - 2011
- [j31]Carola Söhngen, Antje Chang, Dietmar Schomburg
Development of an automatic Classification Scheme for Disease-related Enzyme Information. BMC Bioinform. 12: 329 (2011) - [j30]Susanne Quester, Dietmar Schomburg
EnzymeDetector: an integrated enzyme function prediction tool and database. BMC Bioinform. 12: 376 (2011) - [j29]Marion Gremse, Antje Chang, Ida Schomburg, Andreas Grote, Maurice Scheer, Christian Ebeling
The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources. Nucleic Acids Res. 39(Database-Issue): 507-513 (2011) - [j28]Maurice Scheer, Andreas Grote, Antje Chang, Ida Schomburg, Cornelia Munaretto, Michael Rother, Carola Söhngen, Michael Stelzer, Juliane Thiele, Dietmar Schomburg
BRENDA, the enzyme information system in 2011. Nucleic Acids Res. 39(Database-Issue): 670-676 (2011) - 2010
- [j27]Stephanie Heinen, Bernhard Thielen, Dietmar Schomburg
KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information of enzymes. BMC Bioinform. 11: 375 (2010) - [j26]Constantin Bannert, A. Welfle, C. aus dem Spring, Dietmar Schomburg
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation. BMC Bioinform. 11: 589 (2010) - [j25]Volker Egelhofer
Automatic Assignment of EC Numbers. PLoS Comput. Biol. 6(1) (2010) - [e2]Dietmar Schomburg, Andreas Grote:
German Conference on Bioinformatics 2010, September 20-22, 2010, Technische Universität Carolo Wilhelmina zu Braunschweig, Germany. LNI P-173, GI 2010, ISBN 978-3-88579-267-3 [contents]
2000 – 2009
- 2009
- [j24]Markus Leber, Volker Egelhofer
Automatic assignment of reaction operators to enzymatic reactions. Bioinform. 25(23): 3135-3142 (2009) - [j23]Bernhard Thielen, Stephanie Heinen, Dietmar Schomburg
mSpecs: a software tool for the administration and editing of mass spectral libraries in the field of metabolomics. BMC Bioinform. 10 (2009) - [j22]Isam Haddad, Karsten Hiller
An Emergent Self-Organizing Map Based Analysis Pipeline for Comparative Metabolome Studies. Silico Biol. 9(4): 163-178 (2009) - [j21]Antje Chang, Maurice Scheer, Andreas Grote, Ida Schomburg, Dietmar Schomburg
BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009. Nucleic Acids Res. 37(Database-Issue): 588-592 (2009) - 2007
- [j20]Philipp Heuser
Combination of scoring schemes for protein docking. BMC Bioinform. 8 (2007) - [j19]Claudia Choi, Claudia Hundertmark, Bernhard Thielen, Beatrice Benkert, Richard Münch, Max Schobert, Dietmar Schomburg, Dieter Jahn, Frank Klawonn
Analysis of metabolome data by a maximum likelihood approach. BMC Syst. Biol. 1(S-1): P20 (2007) - [j18]Claudia Choi, Richard Münch, Boyke Bunk, Jens Barthelmes, Christian Ebeling, Dietmar Schomburg, Max Schobert, Dieter Jahn:
Combination of a data warehouse concept with web services for the establishment of the Pseudomonas systems biology database SYSTOMONAS. J. Integr. Bioinform. 4(1) (2007) - [j17]Jens Barthelmes, Christian Ebeling
BRENDA, AMENDA and FRENDA: the enzyme information system in 2007. Nucleic Acids Res. 35(Database-Issue): 511-514 (2007) - [j16]Claudia Choi, Richard Münch, Stefan Leupold, Johannes Klein, Inga Siegel, Bernhard Thielen, Beatrice Benkert, Martin Kucklick, Max Schobert, Jens Barthelmes, Christian Ebeling
SYSTOMONAS - an integrated database for systems biology analysis of Pseudomonas. Nucleic Acids Res. 35(Database-Issue): 533-537 (2007) - [c20]Frank Klawonn
A Likelihood Ratio Test for Differential Metabolic Profiles in Multiple Intensity Measurements. KES (2) 2007: 485-492 - 2006
- [j15]Syed Asad Rahman
Observing local and global properties of metabolic pathways: "load points" and "choke points" in the metabolic networks. Bioinform. 22(14): 1767-1774 (2006) - [j14]Philipp Heuser
Optimised amino acid specific weighting factors for unbound protein docking. BMC Bioinform. 7: 344 (2006) - [j13]Vijaya Parthiban, M. Michael Gromiha, Dietmar Schomburg
CUPSAT: prediction of protein stability upon point mutations. Nucleic Acids Res. 34(Web-Server-Issue): 239-242 (2006) - 2005
- [j12]Syed Asad Rahman
Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC). Bioinform. 21(7): 1189-1193 (2005) - [j11]Joachim Reichelt, Guido Dieterich, Marsel Kvesic, Dietmar Schomburg
BRAGI: linking and visualization of database information in a 3D viewer and modeling tool. Bioinform. 21(7): 1291-1293 (2005) - [j10]Oliver Hofmann
Concept-based annotation of enzyme classes. Bioinform. 21(9): 2059-2066 (2005) - [j9]Syed Asad Rahman
Metabolic Network Analysis: Implication And Application. BMC Bioinform. 6(S-3) (2005) - 2004
- [j8]Torsten Crass, Iris Antes, Rico Basekow, Peer Bork
The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinform. 20(2): 268-270 (2004) - [j7]Ida Schomburg, Antje Chang, Christian Ebeling, Marion Gremse, Christian Heldt, Gregor Huhn, Dietmar Schomburg:
BRENDA, the enzyme database: updates and major new developments. Nucleic Acids Res. 32(Database-Issue): 431-433 (2004) - [j6]Astrid Fleischmann, Michael Darsow, Kirill Degtyarenko, Wolfgang Fleischmann, Sinéad Boyce, Kristian B. Axelsen
IntEnz, the integrated relational enzyme database. Nucleic Acids Res. 32(Database-Issue): 434-437 (2004) - [c19]Guido Dieterich, Marsel Kvesic, Dietmar Schomburg, Dirk W. Heinz, Joachim Reichelt:
Integrating public databases into an existing protein visualization and modeling program - BRAGI. German Conference on Bioinformatics 2004: 149-155 - 2002
- [j5]Dietmar Schomburg, Martin Vingron:
Bioinformatics research and education in Germany. Silico Biol. 2(3): 169-171 (2002) - [j4]Ida Schomburg, Antje Chang, Dietmar Schomburg:
BRENDA, enzyme data and metabolic information. Nucleic Acids Res. 30(1): 47-49 (2002) - [c18]P. Pipenbacher, Alexander Schliep, Sebastian Schneckener, Alexander Schönhuth, Dietmar Schomburg, Rainer Schrader:
ProClust: improved clustering of protein sequences with an extended graph-based approach. ECCB 2002: 182-191 - 2001
- [j3]Eva Bolten, Alexander Schliep
Clustering protein sequences-structure prediction by transitive homology. Bioinform. 17(10): 935-941 (2001) - [j2]Eva Bolten, Alexander Schliep
Strongly Connected Components can Predict Protein Structure. Electron. Notes Discret. Math. 8: 10-13 (2001) - [c17]Dietmar Schomburg, Ida Schomburg, Antje Chang, Oliver Hofmann, Christian Ebeling, F. Ehrentreich:
BRENDA a resource for Enzyme data and metabolic pathway information. German Conference on Bioinformatics 2001: 222
1990 – 1999
- 1999
- [c16]Dietmar Schomburg:
Functional Genomics - an integrated approach to the biosiences. German Conference on Bioinformatics 1999: 80 - [c15]Eva Bolten, Alexander Schliep, Sebastian Schneckener, Dietmar Schomburg, Rainer Schrader:
Clustering Protein Sequences ? Structure Prediction by Transitive Homology. German Conference on Bioinformatics 1999: 181 - [c14]Oliver Leven, Dietmar Schomburg:
Prediction of Protein Thermostability. German Conference on Bioinformatics 1999: 210 - [c13]Dietmar Schomburg, Ida Schomburg, Antje Chang, C. Bänsch:
BRENDA the Information System for Enzymes and metabolic Information. German Conference on Bioinformatics 1999: 226-227 - [c12]Olav Zimmermann, Peter Krämer, Dietmar Schomburg:
Pre- and Postfiltering in Protein Docking. German Conference on Bioinformatics 1999: 231-232 - 1998
- [j1]Michael Meyer, Gerd Wohlfahrt
Aspects of the mechanism of catalysis of glucose oxidase: A docking, molecular mechanics and quantum chemical study. J. Comput. Aided Mol. Des. 12(5): 425-440 (1998) - [c11]Peter Krämer, Dietmar Schomburg:
Use of local intermolecular interactions for the prediction of protein/protein binding sites. German Conference on Bioinformatics 1998 - [c10]Oliver Leven, Dietmar Schomburg:
Prediction of Protein Thermostability. German Conference on Bioinformatics 1998 - [c9]Dietmar Schomburg:
BRENDA, Enzyme Data for Metabolic pathways. German Conference on Bioinformatics 1998 - [c8]Olav Zimmermann, Oliver Martin, Dietmar Schomburg:
Geometric Docking of Transmembrane Structures. German Conference on Bioinformatics 1998 - 1997
- [c7]Sebastian Schneckener, Dietmar Schomburg:
Improvement of sequence-structure alignment quality by an empirical energy function. German Conference on Bioinformatics 1997: 179 - [e1]Ralf Hofestädt, Thomas Lengauer, Markus Löffler, Dietmar Schomburg:
Bioinformatics, German Conference on Bioinformatics, Leipzig, Germany, September 30 - October 2, 1996, Selected Papers. Lecture Notes in Computer Science 1278, Springer 1997, ISBN 3-540-63370-7 [contents] - 1996
- [c6]Uta F. Lessel, Dietmar Schomburg:
Knowledge-Based Loop Prediction. German Conference on Bioinformatics 1996: 260 - [c5]Michael Meyer, Gerd Wohlfahrt, Dietmar Schomburg:
Aspects of the Mechanism of Glucose Oxidase. German Conference on Bioinformatics 1996: 276-277 - [c4]Michael Meyer, Peter Wilson, Dietmar Schomburg:
Protein Docking with Correlation Methods. German Conference on Bioinformatics 1996: 278-279 - [c3]Sebastian Schneckener, Dietmar Schomburg:
Optimal Gap Penalties and Similarity Matrices for Sequence Alignment. German Conference on Bioinformatics 1996: 292-293 - 1995
- [c2]Friedrich Ackermann, Grit Herrmann, Franz Kummert, Stefan Posch, Gerhard Sagerer, Dietmar Schomburg:
Protein Docking: Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. ISMB 1995: 3-11 - 1993
- [c1]Dietmar Schomburg:
Computer Aided Protein Design: Methods and Applications. Informatik in den Biowissenschaften 1993: 11-20
Coauthor Index
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