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16 pages, 4032 KiB  
Article
In Situ Microscopy with Real-Time Image Analysis Enables Online Monitoring of Technical Protein Crystallization Kinetics in Stirred Crystallizers
by Julian Mentges, Daniel Bischoff, Brigitte Walla and Dirk Weuster-Botz
Crystals 2024, 14(12), 1009; https://doi.org/10.3390/cryst14121009 - 21 Nov 2024
Abstract
Controlling protein crystallization processes is essential for improving downstream processing in biotechnology. This study investigates the combination of machine learning-based image analysis and in situ microscopy for real-time monitoring of protein crystallization kinetics. The experimental research is focused on the batch crystallization of [...] Read more.
Controlling protein crystallization processes is essential for improving downstream processing in biotechnology. This study investigates the combination of machine learning-based image analysis and in situ microscopy for real-time monitoring of protein crystallization kinetics. The experimental research is focused on the batch crystallization of an alcohol dehydrogenase from Lactobacillus brevis (LbADH) and two selected rational crystal contact mutants. Technical protein crystallization experiments were performed in a 1 L stirred crystallizer by adding polyethyleneglycol 550 monomethyl ether (PEG 550 MME). The estimated crystal volumes from online microscopy correlated well with the offline measured protein concentrations in solution. In addition, in situ microscopy was superior to offline data if amorphous protein precipitation occurred. Real-time image analysis provides the data basis for online estimation of important batch crystallization performance indicators like yield, crystallization kinetics, crystal size distributions, and number of protein crystals. Surprisingly, one of the LbADH mutants, which should theoretically crystallize more slowly than the wild type based on molecular dynamics (MD) simulations, showed better crystallization performance except for the yield. Thus, online monitoring of scalable protein crystallization processes with in situ microscopy and real-time image analysis improves the precision of crystallization studies for industrial settings by providing comprehensive data, reducing the limitations of traditional analytical techniques, and enabling new insights into protein crystallization process dynamics. Full article
(This article belongs to the Section Biomolecular Crystals)
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<p>(<b>a</b>) Schematic drawing of the stirred 1 L crystallizer, with integrated in situ microscopy probe, agitator, and sampling tube, with a schematic enlargement of the probe cleft and the expected particle flow profile. (<b>b</b>) Photograph of the stirred 1 L crystallizer with double jacket for temperature control and the in situ microscopy probe.</p>
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<p>(<b>a</b>) Crystallization experiments of the LbADH WT in a stirred 1 L crystallizer to identify the ratio of maximum local energy dissipation to mean power input by varying the stirrer speed from 50 rpm (yellow), 75 rpm (gray) and 100 rpm (blue) (c<sub>0</sub> = 5 g L<sup>−1</sup>, 100 g L<sup>−1</sup> PEG MME 550, 100 mM Tris-HCl, 50 mM MgCl<sub>2</sub>, pH 7.0, T = 20 °C). The black dotted vertical line indicates the start of the crystallization (3 h), determined as the point at which a decrease of more than 1% in protein concentration was observed between two consecutive measurements; (<b>b</b>) Furthermore, the respective yields (gray) and the maximum crystallization speeds (yellow), obtained from the logistic fits, are plotted against the stirrer speed. The error bars (min-max values) result from carrying out the experiments twice.</p>
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<p>(<b>a</b>) Illustration of <span class="html-italic">Lb</span>ADH WT crystallization experiments in a stirred 1 L crystallizer. The online observed crystal volume (light gray, dark gray) and the offline measured protein concentration (blue) in the supernatant, as well as the average crystallization volume (orange), are depicted. (<b>b</b>) Furthermore, the non-soluble protein concentration (blue) and the respective logistic fits (blue, orange) are shown. The sampling rate of the automatic image evaluation was 0.016 Hz. A moving average considering the surrounding 10 values was used to smooth the raw data of the crystal volume. (<b>c</b>) An exemplary photomicrograph after 8 h crystallization is shown (<b>left</b>). This photomicrograph was also evaluated by the image analysis software, and the crystals detected were marked (<b>center</b>). The crystal agglomerate formation at the end of the process can be seen in the (<b>right</b>) photomicrograph. (c<sub>0</sub> = 5 g L<sup>−1</sup>, 100 g L<sup>−1</sup> PEG 550 MME, n<sub>s</sub> = 50 rpm, 100 mM Tris-HCl, 50 mM MgCl<sub>2</sub>, pH 7.0, T = 20 °C).</p>
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<p>(<b>a</b>) Online observed crystal volume (orange) and offline measured non-soluble protein concentration (blue) with the corresponding logistic fits during the batch crystallization experiment of the LbADH WT with initial amorphous precipitation due to rapid addition of the crystallization buffer. A moving average considering the surrounding 10 values was used to smooth the raw data of the crystal volume. (<b>b</b>) In addition, two representative photomicrographs at the beginning (<b>left</b>) and at the end of the crystallization process (<b>right</b>) are shown. (f<sub>s</sub> = 0.16 Hz, c<sub>0</sub> = 5 g L<sup>−1</sup>, 100 g L<sup>−1</sup> PEG 550 MME, n<sub>s</sub> = 50 rpm, 100 mM Tris-HCl, 50 mM MgCl<sub>2</sub>, pH 7.0, T = 20 °C).</p>
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<p>Online observed crystal volume (light gray, dark gray) and offline measured protein in the supernatant or the non-soluble protein concentration during batch crystallization experiments of the <span class="html-italic">Lb</span>ADH mutants Q207D (green) and T102E (red) in a stirred 1 L crystallizer, as well as the average crystallization volume (orange). Furthermore, the respective logistic fits (green, red, orange) are shown. In addition, a moving average considering the surrounding 10 values was used to smooth the raw data of the crystal volume (f<sub>s</sub> = 0.16 Hz, c<sub>0</sub> = 5 g L<sup>−1</sup>, 100 g L<sup>−1</sup> PEG 550 MME, n<sub>s</sub> = 50 rpm, 100 mM Tris-HCl, 50 mM MgCl<sub>2</sub>, pH 7.0, T = 20 °C).</p>
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<p>Final size distributions of protein crystals of the LbADH WT and the mutants T102E and Q207D (bars: crystal count; line: interpolated cumulative distributions). Shown are the distributions (intervals of 2.5 µm) of the length (<b>left</b>) and width (<b>right</b>) of protein crystals after 24 h stirred crystallization on a 1 L scale (c<sub>0</sub> = 5 g L<sup>−1</sup>, 100 g L<sup>−1</sup> PEG 550 MME, n<sub>s</sub> = 50 rpm, 100 mM Tris-HCl, 50 mM MgCl<sub>2</sub>, pH 7.0, T = 20 °C).</p>
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29 pages, 1256 KiB  
Article
Aspect-Based Sentiment Analysis of Patient Feedback Using Large Language Models
by Omer S. Alkhnbashi, Rasheed Mohammad and Mohammad Hammoudeh
Big Data Cogn. Comput. 2024, 8(12), 167; https://doi.org/10.3390/bdcc8120167 - 21 Nov 2024
Abstract
Online medical forums have emerged as vital platforms for patients to share their experiences and seek advice, providing a valuable, cost-effective source of feedback for medical service management. This feedback not only measures patient satisfaction and improves health service quality but also offers [...] Read more.
Online medical forums have emerged as vital platforms for patients to share their experiences and seek advice, providing a valuable, cost-effective source of feedback for medical service management. This feedback not only measures patient satisfaction and improves health service quality but also offers crucial insights into the effectiveness of medical treatments, pain management strategies, and alternative therapies. This study systematically identifies and categorizes key aspects of patient experiences, emphasizing both positive and negative sentiments expressed in their narratives. We collected a dataset of approximately 15,000 entries from various sections of the widely used medical forum, patient.info. Our innovative approach integrates content analysis with aspect-based sentiment analysis, deep learning techniques, and a large language model (LLM) to analyze these data. Our methodology is designed to uncover a wide range of aspect types reflected in patient feedback. The analysis revealed seven distinct aspect types prevalent in the feedback, demonstrating that deep learning models can effectively predict these aspect types and their corresponding sentiment values. Notably, the LLM with few-shot learning outperformed other models. Our findings enhance the understanding of patient experiences in online forums and underscore the utility of advanced analytical techniques in extracting meaningful insights from unstructured patient feedback, offering valuable implications for healthcare providers and medical service management. Full article
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<p>A conceptual architectural diagram for the proposed methodology.</p>
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<p>Distribution of bias counts in patient feedback.</p>
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<p>Receiver Operating Characteristic (ROC).</p>
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43 pages, 4570 KiB  
Article
Fine-Tuning Retrieval-Augmented Generation with an Auto-Regressive Language Model for Sentiment Analysis in Financial Reviews
by Miehleketo Mathebula, Abiodun Modupe and Vukosi Marivate
Appl. Sci. 2024, 14(23), 10782; https://doi.org/10.3390/app142310782 - 21 Nov 2024
Viewed by 75
Abstract
Sentiment analysis is a well-known task that has been used to analyse customer feedback reviews and media headlines to detect the sentimental personality or polarisation of a given text. With the growth of social media and other online platforms, like Twitter (now branded [...] Read more.
Sentiment analysis is a well-known task that has been used to analyse customer feedback reviews and media headlines to detect the sentimental personality or polarisation of a given text. With the growth of social media and other online platforms, like Twitter (now branded as X), Facebook, blogs, and others, it has been used in the investment community to monitor customer feedback, reviews, and news headlines about financial institutions’ products and services to ensure business success and prioritise aspects of customer relationship management. Supervised learning algorithms have been popularly employed for this task, but the performance of these models has been compromised due to the brevity of the content and the presence of idiomatic expressions, sound imitations, and abbreviations. Additionally, the pre-training of a larger language model (PTLM) struggles to capture bidirectional contextual knowledge learnt through word dependency because the sentence-level representation fails to take broad features into account. We develop a novel structure called language feature extraction and adaptation for reviews (LFEAR), an advanced natural language model that amalgamates retrieval-augmented generation (RAG) with a conversation format for an auto-regressive fine-tuning model (ARFT). This helps to overcome the limitations of lexicon-based tools and the reliance on pre-defined sentiment lexicons, which may not fully capture the range of sentiments in natural language and address questions on various topics and tasks. LFEAR is fine-tuned on Hellopeter reviews that incorporate industry-specific contextual information retrieval to show resilience and flexibility for various tasks, including analysing sentiments in reviews of restaurants, movies, politics, and financial products. The proposed model achieved an average precision score of 98.45%, answer correctness of 93.85%, and context precision of 97.69% based on Retrieval-Augmented Generation Assessment (RAGAS) metrics. The LFEAR model is effective in conducting sentiment analysis across various domains due to its adaptability and scalable inference mechanism. It considers unique language characteristics and patterns in specific domains to ensure accurate sentiment annotation. This is particularly beneficial for individuals in the financial sector, such as investors and institutions, including those listed on the Johannesburg Stock Exchange (JSE), which is the primary stock exchange in South Africa and plays a significant role in the country’s financial market. Future initiatives will focus on incorporating a wider range of data sources and improving the system’s ability to express nuanced sentiments effectively, enhancing its usefulness in diverse real-world scenarios. Full article
(This article belongs to the Special Issue Applications of Data Science and Artificial Intelligence)
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<p>Proposed LFEAR model for sentiment analysis.</p>
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<p>Few-shot learning with the Meta-Llama-3 model.</p>
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<p>Chain-of-thought reasoning with the OpenAI GPT-4o Mini model.</p>
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<p>Reason and Act with OpenAI GPT-3.5 Turbo Model.</p>
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<p>Word clouds of frequently used terms in negative and positive Hellopeter reviews. (<b>a</b>) Negative; (<b>b</b>) Positive.</p>
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<p>Distribution of sentiment polarity scores in Hellopeter reviews.</p>
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<p>Scattertext visualisation of positive and negative words.</p>
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<p>Confusion matrices for Llama models on the Hellopeter dataset. (<b>a</b>) Llama-2-7b-hf confusion matrix; (<b>b</b>) Meta-Llama-3-8B-Instruct confusion matrix.</p>
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<p>Confusion matrices for GPT Models on the Hellopeter Dataset. (<b>a</b>) gpt-3.5-turbo-0125 confusion matrix; (<b>b</b>) gpt-4o-mini-2024-07-18 confusion matrix.</p>
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<p>Confusion matrix for the proposed inference model on the Hellopeter dataset.</p>
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<p>RAGAS performance metrics for the proposed inference model on the Hellopeter dataset.</p>
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<p>LFEAR distribution of results.</p>
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<p>Sentiment intensity analysis results for the Hellopeter dataset using LFEAR. (<b>a</b>) LFEAR Sentiment intensity distribution in the Hellopeter dataset; (<b>b</b>) LFEAR proportion of sentiment categories in the Hellopeter dataset.</p>
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<p>LFEAR performance on the Hellopeter dataset. (<b>a</b>) Polarity score distribution; (<b>b</b>) Vendi score distribution.</p>
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44 pages, 7513 KiB  
Review
Solving the Chemistry Puzzle—A Review on the Application of Escape-Room-Style Puzzles in Undergraduate Chemistry Teaching
by Marissa Lorrene Clapson, Shauna Schechtel, Emma Davy and Connor Skye Durfy
Educ. Sci. 2024, 14(12), 1273; https://doi.org/10.3390/educsci14121273 - 21 Nov 2024
Viewed by 66
Abstract
Active learning techniques are taking the classroom by storm. Numerous research articles have highlighted the benefits of active learning techniques on student understanding, knowledge retention, problem solving, and teamwork. One avenue to introduce active learning into the classroom is the gamification of course [...] Read more.
Active learning techniques are taking the classroom by storm. Numerous research articles have highlighted the benefits of active learning techniques on student understanding, knowledge retention, problem solving, and teamwork. One avenue to introduce active learning into the classroom is the gamification of course learning content. Educational escape rooms are one such example in which students solve a series of puzzles related to course content to “escape” within a set time frame. Escape games play an interesting role in motivating students, building communication skills and allowing for multimodal learning, having been shown to increase students’ test results and enjoyment of the course content. In lieu of the traditional escape room format, a fully immersive room(s) with classical escape room puzzles (finding items, riddles, alternative locking mechanisms) is used alongside learning activities, and educators have begun to develop truncated activities for easier applications in larger classrooms. In this review, we explore several escape room activities: immersive, paper-based, Battle Boxes, condensed escape activities, and online/virtual, providing examples of the types of puzzles included therein. We similarly discuss the creation of escape room materials and recommendations for the interested educator, as well as the learning benefits of engaging in puzzle development. Finally, we provide an overview on methods to assess active learning through escape rooms, establishing an overview of empirical evidence towards their effectiveness as a learning tool. Full article
(This article belongs to the Special Issue The Power of Play: Gamification for Engaging and Effective Learning)
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<p>The Learning Pyramid (adapted from National Training Laboratories, Bethel, ME, USA). Teaching and learning method (% average knowledge retention rate).</p>
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<p>The Kolb’s Experiential Learning Cycle [<a href="#B21-education-14-01273" class="html-bibr">21</a>] and model of game-based learning [<a href="#B30-education-14-01273" class="html-bibr">30</a>] in relation to educational escape room games.</p>
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<p>“Escape ClassRoom CSI 1.0” content layout and analytical puzzles included in area 3 (forensics laboratory); arrows indicate direction of intended movement through the zones [<a href="#B48-education-14-01273" class="html-bibr">48</a>].</p>
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<p>Example “wet” puzzle experiments from the “Break Dalton’s Code and Escape!” activity. (<b>A</b>). Puzzle #102, ordering samples by increasing pH opens the corresponding lock. (<b>B</b>). Puzzle #103, reacting metal nitrate solutions with metal reagents allows students to rank the reducing abilities of metals and correlate these with a Dalton symbol. (<b>C</b>). Puzzle #106, measuring the conductivity of four solutions provides combination for lock [<a href="#B49-education-14-01273" class="html-bibr">49</a>].</p>
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<p>(<b>A</b>). UV-Vis and (<b>B</b>). gas chromatography puzzles in the “Escape the Lab” activity [<a href="#B56-education-14-01273" class="html-bibr">56</a>].</p>
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<p>“Spectroscopy Unlocked” (<b>A</b>). thin-layer chromatography station and (<b>B</b>). NMR spectroscopy station [<a href="#B60-education-14-01273" class="html-bibr">60</a>].</p>
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<p>Select “wet” puzzle examples from the mobile escape room described by Peleg et al. (<b>A</b>). Puzzle 5—pink jar. (<b>B</b>). Puzzle 7—release the key; arrows indicate order of stepwise interaction with puzzles [<a href="#B61-education-14-01273" class="html-bibr">61</a>].</p>
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<p>Example enigma sheets from “Escape Classroom: The Leblanc Process”: (<b>A</b>). balancing the reaction for the formation of black ash (sodium carbonate and calcium sulfide); (<b>B</b>). reaction conditions puzzle; arrows indicate lock code determined from puzzle solution [<a href="#B63-education-14-01273" class="html-bibr">63</a>].</p>
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<p>Puzzles 1 (molecular dipole) and 2 (bonding interactions) developed for the superhero-themed escape room by Ang et al [<a href="#B65-education-14-01273" class="html-bibr">65</a>].</p>
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<p>Selected puzzles from “Project: LockBox”. The gas law worksheet (<b>left</b>) and point group worksheet (<b>right</b>) [<a href="#B66-education-14-01273" class="html-bibr">66</a>].</p>
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<p>Life cycle analysis puzzle comparing two synthetic routes for the depolymerization of poly(ethylene terephthalate). GWP = global warming potential (kg CO<sub>2</sub> equiv.), IR = ionizing radiation (kBq Co-60 equiv.), LU = land use (m<sup>2</sup>a crop equiv.), Terr. E. = terrestrial ecotoxicity (kg 1,4-DCM) [<a href="#B67-education-14-01273" class="html-bibr">67</a>].</p>
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<p>“ChemEscape Battle Box” featuring general chemistry puzzles: puzzle 2: zinc/copper water cell (<b>right</b>) and puzzle 4: thin-layer chromatography (<b>left</b>) [<a href="#B55-education-14-01273" class="html-bibr">55</a>].</p>
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<p>“ChemEscape: Polymers” Battle Box featuring puzzle 1: tacticity (<b>left</b>) and puzzle 3: hydrophobicity (<b>right</b>) [<a href="#B70-education-14-01273" class="html-bibr">70</a>].</p>
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<p>“ChemEscape: Redox and Thermodynamics”. Puzzle 1: equilibrium constants (<b>left</b>) and puzzle 3: metal redox properties (<b>right</b>) [<a href="#B55-education-14-01273" class="html-bibr">55</a>].</p>
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<p>Galvanic cell escape box developed by Strippel, Schröder, and Sommer [<a href="#B72-education-14-01273" class="html-bibr">72</a>].</p>
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<p>(<b>A</b>–<b>C</b>) Royal Society of Chemistry “Escape the Classroom” materials science puzzles [<a href="#B73-education-14-01273" class="html-bibr">73</a>].</p>
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<p>Select examples from “Escape the (Remote) Classroom: Chocolate Factory”. Determination of molecular weight puzzle (<b>left</b>). Linear regression puzzle (<b>right</b>) [<a href="#B77-education-14-01273" class="html-bibr">77</a>].</p>
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<p>Select puzzle examples from “The Masked Scientist” activity. (<b>A</b>). Elements attracted to the magnet puzzle. (<b>B</b>). Smoke detector puzzle [<a href="#B79-education-14-01273" class="html-bibr">79</a>].</p>
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20 pages, 1628 KiB  
Review
Energy Efficiency for 5G and Beyond 5G: Potential, Limitations, and Future Directions
by Adrian Ichimescu, Nirvana Popescu, Eduard C. Popovici and Antonela Toma
Sensors 2024, 24(22), 7402; https://doi.org/10.3390/s24227402 - 20 Nov 2024
Viewed by 227
Abstract
Energy efficiency constitutes a pivotal performance indicator for 5G New Radio (NR) networks and beyond, and achieving optimal efficiency necessitates the meticulous consideration of trade-offs against other performance parameters, including latency, throughput, connection densities, and reliability. Energy efficiency assumes it is of paramount [...] Read more.
Energy efficiency constitutes a pivotal performance indicator for 5G New Radio (NR) networks and beyond, and achieving optimal efficiency necessitates the meticulous consideration of trade-offs against other performance parameters, including latency, throughput, connection densities, and reliability. Energy efficiency assumes it is of paramount importance for both User Equipment (UE) to achieve battery prologue and base stations to achieve savings in power and operation cost. This paper presents an exhaustive review of power-saving research conducted for 5G and beyond 5G networks in recent years, elucidating the advantages, disadvantages, and key characteristics of each technique. Reinforcement learning, heuristic algorithms, genetic algorithms, Markov Decision Processes, and the hybridization of various standard algorithms inherent to 5G and 5G NR represent a subset of the available solutions that shall undergo scrutiny. In the final chapters, this work identifies key limitations, namely, computational expense, deployment complexity, and scalability constraints, and proposes a future research direction by theoretically exploring online learning, the clustering of the network base station, and hard HO to lower the consumption of networks like 2G or 4G. In lowering carbon emissions and lowering OPEX, these three additional features could help mobile network operators achieve their targets. Full article
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<p>5G network.</p>
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<p>System model of the considered STIN.</p>
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<p>System model of ITAN with multi-layer RIS.</p>
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<p>Proposed theoretical solution.</p>
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17 pages, 2660 KiB  
Article
Collapse of Pre-COVID-19 Differences in Performance in Online vs. In-Person College Science Classes, and Continued Decline in Student Learning
by Gregg R. Davidson, Hong Xiao and Kristin Davidson
Educ. Sci. 2024, 14(11), 1268; https://doi.org/10.3390/educsci14111268 - 20 Nov 2024
Viewed by 366
Abstract
Studies comparing student outcomes for online vs. in-person classes have reported mixed results, though with a majority finding that lower-performing students, on average, fare worse in online classes, attributed to the lack of built-in structure provided by in-person instruction. The online/in-person outcome disparity [...] Read more.
Studies comparing student outcomes for online vs. in-person classes have reported mixed results, though with a majority finding that lower-performing students, on average, fare worse in online classes, attributed to the lack of built-in structure provided by in-person instruction. The online/in-person outcome disparity was normative for non-major geology classes at the University of Mississippi prior to COVID-19, but the difference disappeared in the years after 2020. Previously distinct trendlines of GPA-based predictions of earned-grade for online and in-person classes merged. Of particular concern, outcomes for in-person classes declined to match pre-COVID-19 online expectations, with lower-GPA students disproportionally impacted. Objective evidence of continued decline in student learning, masked by sliding grading scales, is also presented with a long-term record of exam scores drawing from the same question pool for over a decade. Average scores remained relatively constant until COVID-19. Scores then declined in each successive year, attributed to an increase over time in the percentage of enrolled students who had been in high school during the pandemic shutdowns. At the close of 2023, exam scores showed no signs of returning to pre-COVID-19 outcomes. The negative impacts of the shutdowns, with greater impact on those who were in high school during the pandemic, appear to be due to a loss in the developmental life-skills (e.g., self-motivation, focus, critical thinking, social development) needed to thrive in college, not just reduced exposure to preparatory subject material. These results provide a global cautionary message for the management of future pandemics. Full article
(This article belongs to the Special Issue Challenges and Trends for Modern Higher Education)
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<p>Number of records for course titles, instructional modality, course length, student major (STEM vs. non-STEM), prior online classes, student age, ethnicity, sex, overall GPA, and academic classification (based on 15 credit-hour increments).</p>
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<p>Cumulative distribution of (<b>a</b>) GPA and (<b>b</b>) grade earned (numerical) for students taking online (solid blue line) and in-person (dashed red lines) courses. Note the horizontal scale is inverted, starting with the highest GPA and grade (4.0).</p>
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<p>GPA vs. grade earned for online and in-person courses pre-COVID-19 (left column) and post-COVID-19 (right column): (<b>a</b>) boxplots of the distribution of letter grades for online (blue) and in-person (red), and (<b>b</b>) linear regression trendlines with slope and y-intercept values for online (solid blue) and in-person (dashed red) courses. Note, with only one exception, no +/− grades were assigned for in-person classes from 2020–2023.</p>
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<p>Linear regression trendlines for GPA vs. grade earned with slope and y-intercept for online (solid blue) and in-person (dashed red) courses broken down by academic classification (freshman-senior) for 2015–2019 (pre-COVID-19, <b>left column</b>) and for 2021–2023 (post-COVID-19, <b>right column</b>).</p>
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<p>Percentage of students in each Fall and Spring semester who were in high school during the COVID-19 shutdowns (impacted). Vertical gridlines represent the start of each calendar year.</p>
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<p>Mean scores for three exams for Physical Geology (Geol 101) online, all taught by the same instructor for ten years, and each year drawing from the same question pool. Vertical gridlines represent the start of each calendar year. In Fall 2020 and Spring 2021, four exams were given, with the first two and second two averaged to plot (points on either side of 2021 line). The anomalous high score for exam 2 in Spring 2020 (dashed lines) is suspected to be linked to cheating.</p>
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<p>Example raw scores for exams from two in-person courses (Geol 104 and 105) taught by the same instructor but over a shorter span of years relative to Geol 101 online (<a href="#education-14-01268-f006" class="html-fig">Figure 6</a>), taught with less frequency (not every Fall and Spring), and with greater variability in instruction or assessment. Vertical gridlines represent the start of each calendar year.</p>
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16 pages, 1756 KiB  
Article
Practical Design and Implementation of Virtual Chatbot Assistants for Bioinformatics Based on a NLU Open Framework
by Aya Allah Elsayed, Ahmed Ibrahem Hafez, Raquel Ceprián, Genís Martínez, Alejandro Granados, Beatriz Soriano, Carlos Llorens and José M. Sempere
Big Data Cogn. Comput. 2024, 8(11), 163; https://doi.org/10.3390/bdcc8110163 - 20 Nov 2024
Viewed by 249
Abstract
In this work, we describe the implementation of an infrastructure of conversational chatbots by using natural language processing and training within the Rasa framework. We use this infrastructure to create a chatbot assistant for the users of a bioinformatics suite. This suite provides [...] Read more.
In this work, we describe the implementation of an infrastructure of conversational chatbots by using natural language processing and training within the Rasa framework. We use this infrastructure to create a chatbot assistant for the users of a bioinformatics suite. This suite provides a customized interface solution for omic pipelines and workflows, and it is named GPRO. The infrastructure has also been used to build another chatbot for a Laboratory Information Management System (LIMS). The two chatbots (namely, Genie and Abu) have been built on an open framework that uses natural language understanding (NLU) and machine learning techniques to understand user queries and respond to them. Users can seamlessly interact with the chatbot to receive support on navigating the GPRO pipelines and workflows. The chatbot provides a bridge between users and the wealth of bioinformatics knowledge available online. Full article
(This article belongs to the Special Issue Artificial Intelligence and Natural Language Processing)
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<p>Summary of GPRO pipelines and workflows.</p>
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<p>Example of user interaction flows with the pipeline of one of the GPRO tools. More interactive diagram are available at <a href="https://gpro.biotechvana.com/genie" target="_blank">https://gpro.biotechvana.com/genie</a> (accessed on 17 November 2024).</p>
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<p>Flow diagram of the model construction process and user interaction with the model.</p>
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<p>An integration scheme of the virtual chatbot assistants within GPRO and LIMS suites.</p>
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20 pages, 5213 KiB  
Article
Radar Moving Target Detection Based on Small-Sample Transfer Learning and Attention Mechanism
by Jiang Zhu, Cai Wen, Chongdi Duan, Weiwei Wang and Xiaochao Yang
Remote Sens. 2024, 16(22), 4325; https://doi.org/10.3390/rs16224325 - 20 Nov 2024
Viewed by 290
Abstract
Moving target detection is one of the most important tasks of radar systems. The clutter echo received by radar is usually strong and heterogeneous when the radar works in a complex terrain environment, resulting in performance degradation in moving target detection. Utilizing prior [...] Read more.
Moving target detection is one of the most important tasks of radar systems. The clutter echo received by radar is usually strong and heterogeneous when the radar works in a complex terrain environment, resulting in performance degradation in moving target detection. Utilizing prior knowledge of the clutter distribution in the space–time domain, this paper proposes a novel moving target detection network based on small-sample transfer learning and attention mechanism. The proposed network first utilizes offline data to train the feature extraction network and reduce the online training time. Meanwhile, the attention mechanism used for feature extraction is applied in the beam-Doppler domain to improve classification accuracy of targets. Then, a small amount of real-time data are applied to a small-sample transfer network to fine-tune the feature extraction network. Finally, the target detection can be realized by the fine-tuned network. Simulation experiments show that the proposed network can eliminate the influence of heterogeneous clutter on moving target detection, and the attention mechanism can improve clutter suppression under a low signal-to-noise ratio regime. The proposed network has a lower computational load compared to conventional neural networks, enabling its use in real-time applications on space-borne/airborne radars. Full article
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<p>Radar operational geometry.</p>
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<p>Small-sample network architecture diagram.</p>
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<p>Feature extraction network diagram.</p>
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<p>Channel attention module network model.</p>
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<p>Spatial attention module network model.</p>
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<p>Few-shot transfer learning network model.</p>
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<p>Schematic diagram of data selection and expansion.</p>
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<p>Prediction results of validation dataset: (<b>a</b>) One-FENet model detection results; (<b>b</b>) Two-FENet model detection results; (<b>c</b>) Three-FENet model detection results.</p>
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<p>Comparison experiment under low-SCR conditions: (<b>a</b>) Comparison experiment on one dataset; (<b>b</b>) comparison experiment on two dataset; (<b>c</b>) comparison experiment on three dataset.</p>
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<p>The impact of attention mechanism on classification prediction: (<b>a</b>) Classification prediction probability for data one; (<b>b</b>) classification prediction probability for data two; (<b>c</b>) classification prediction probability for data three.</p>
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<p>Comparison results with the few-shot network and traditional STAP + CFAR method: (<b>a</b>) Comparison experiment under One-FENet model; (<b>b</b>) comparison experiment under Two-FENet model; (<b>c</b>) comparison experiment under Three-FENet model.</p>
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<p>Moving target detection results with SSM-Net and STAP+CFAR: (<b>a</b>) Detection results under One-FENet model; (<b>b</b>) detection results for the first category using STAP + CFAR; (<b>c</b>) detection results under Two-FENet model; (<b>d</b>) detection results for the second category using STAP + CFAR; (<b>e</b>) detection results under Three-FENet model; (<b>f</b>) detection results for the third category using STAP + CFAR.</p>
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19 pages, 1191 KiB  
Article
Fostering the Interdisciplinary Learning of Contemporary Physics Through Digital Technologies: The “Gravitas” Project
by Matteo Tuveri, Arianna Steri, Daniela Fadda, Riccardo Stefanizzi, Viviana Fanti and Walter Marcello Bonivento
Digital 2024, 4(4), 971-989; https://doi.org/10.3390/digital4040048 - 19 Nov 2024
Viewed by 207
Abstract
The interdisciplinary teaching of contemporary physics has become increasingly common in physics education, especially for high school students and teachers. This approach, which integrates content and methodologies from various disciplines, fosters scientific reasoning, enhances creativity, and increases student motivation and interest in physics. [...] Read more.
The interdisciplinary teaching of contemporary physics has become increasingly common in physics education, especially for high school students and teachers. This approach, which integrates content and methodologies from various disciplines, fosters scientific reasoning, enhances creativity, and increases student motivation and interest in physics. The use of digital technologies, such as social media platforms, supports these educational goals by facilitating the inclusive and cost-effective dissemination of scientific knowledge and the development of soft skills. This paper introduces the “Gravitas” project, an initiative that employs an interdisciplinary approach to present contemporary physics topics to high school students through social media. Coordinated by the Cagliari Division of the National Institute of Nuclear Physics (INFN) in Italy, the “Gravitas” project offers a non-traditional learning environment where students explore modern physics and philosophy and the history of science. Through the creation of educational materials, such as social media posts, students actively engage in their learning. In 2022, around 250 students from 16 high schools across Sardinia, Italy, participated in this project. This paper discusses the learning outcomes, highlighting the potential of integrating formal high school curricula with innovative educational and digital tools. Full article
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<p>Number of posts for a given topic. In blue are the total number of choices; in orange, grey, and yellow are the choices divided by year, i.e., third, fourth, and fifth.</p>
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<p>Number of posts grouped by category, divided by year.</p>
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<p>Number of posts related to both physics and non-physics contents, divided by year.</p>
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26 pages, 1748 KiB  
Article
Sparse Online Gaussian Process Adaptive Control of Unmanned Aerial Vehicle with Slung Payload
by Muhammed Rasit Kartal, Dmitry I. Ignatyev and Argyrios Zolotas
Drones 2024, 8(11), 687; https://doi.org/10.3390/drones8110687 - 19 Nov 2024
Viewed by 284
Abstract
In the past decade, Unmanned Aerial Vehicles (UAVs) have garnered significant attention across diverse applications, including surveillance, cargo shipping, and agricultural spraying. Despite their widespread deployment, concerns about maintaining stability and safety, particularly when carrying payloads, persist. The development of such UAV platforms [...] Read more.
In the past decade, Unmanned Aerial Vehicles (UAVs) have garnered significant attention across diverse applications, including surveillance, cargo shipping, and agricultural spraying. Despite their widespread deployment, concerns about maintaining stability and safety, particularly when carrying payloads, persist. The development of such UAV platforms necessitates the implementation of robust control mechanisms to ensure stable and precise maneuvering capabilities. Numerous UAV operations require the integration of payloads, which introduces substantial stability challenges. Notably, operations involving unstable payloads such as liquid or slung payloads pose a considerable challenge in this regard, falling into the category of mismatched uncertain systems. This study focuses on establishing stability for slung payload-carrying systems. Our approach involves a combination of various algorithms: the incremental backstepping control algorithm (IBKS), integrator backstepping (IBS), Proportional–Integral–Derivative (PID), and the Sparse Online Gaussian Process (SOGP), a machine learning technique that identifies and mitigates disturbances. With a comparison of linear and nonlinear methodologies through different scenarios, an investigation for an effective solution has been performed. Implementation of the machine learning component, employing SOGP, effectively detects and counteracts disturbances. Insights are discussed within the remit of rejecting liquid sloshing disturbance. Full article
(This article belongs to the Special Issue Advances of UAV in Precision Agriculture)
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<p>Pendulum and UAV frames.</p>
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<p>Proposed cascade control system diagram.</p>
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<p>Proportional–Integral–Derivative(PID) controller diagram.</p>
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<p>Integrator backstepping diagram.</p>
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<p>Incremental backstepping methodology diagram.</p>
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<p>Anti-windup command filter diagram.</p>
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<p>Proposed cascade control system diagram.</p>
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<p>Step signal command for position and controller performance comparison.</p>
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<p>Step signal command for position and controller performance comparison with payload.</p>
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<p>UAV spraying drone visual.</p>
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<p>Spraying operation from the top.</p>
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<p>Spraying operation from the corner angle.</p>
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<p>X, Y, Z position error values on simulation.</p>
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<p>X-Y-Z position, alpha angle, beta angle and weight change relation.</p>
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18 pages, 1330 KiB  
Article
The Role of Simulation in Exposing Hidden Gender Biases: A Study of Motivational Discourse in Mathematics Education
by Dafna Zuckerman, Yaacov B. Yablon and Shira Iluz
Educ. Sci. 2024, 14(11), 1265; https://doi.org/10.3390/educsci14111265 - 19 Nov 2024
Viewed by 255
Abstract
This study investigated the value of simulation workshops designed to enhance motivational discourse between mathematics teachers and struggling students who have difficulty keeping up with the curriculum, especially in advanced mathematics. Grounded in the self-determination theory, we examined teachers’ motivational discourse by having [...] Read more.
This study investigated the value of simulation workshops designed to enhance motivational discourse between mathematics teachers and struggling students who have difficulty keeping up with the curriculum, especially in advanced mathematics. Grounded in the self-determination theory, we examined teachers’ motivational discourse by having them participate in simulated individual dialogues with students, with a focus on the differences in the motivational discourse with male and female students. Twenty-nine middle school mathematics teachers (89.6% female; mean experience = 9.4 years, SD = 8.7) participated in the online simulations, each of which presented a scenario where an actor portrayed a struggling student contemplating dropping out of math class. Based on the observational measures of motivational discourse, the findings reveal significant gender disparities in that teachers tended to provide more support and autonomy to male students. Moreover, they tend to direct more frequent and intense autonomy-suppressing behaviors toward female students. The results highlight the efficacy of simulation-based workshops in uncovering teachers’ hidden behavioral patterns. It also highlights the importance of simulation-based learning to tailor professional development issues and for addressing unconscious gender biases in mathematics education. Full article
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<p>The distribution of motivation supporting behaviors. Note. Error bars for 95% confidence interval based on proportion standard errors.</p>
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<p>Distribution of motivation types by gender. Note. <span class="html-italic">p</span>-values represent two-proportion comparison Z test results in each motivation type.</p>
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<p>Gender effect on strength across motivational types. Note. Standard errors in parentheses.</p>
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14 pages, 254 KiB  
Article
A Two-Country Questionnaire Study of Biomedical Student Opinions Regarding Online Teaching During COVID-19
by Irena Ognjanovic, Irina Yakushina, Elena Shustikova, Maria Mikerova, Vladimir Reshetnikov, Sara Mijailovic, Jelena Nedeljkovic, Dragan Milovanovic, Ljiljana Tasic, Vladimir Jakovljevic and Tamara Nikolic Turnic
Epidemiologia 2024, 5(4), 692-705; https://doi.org/10.3390/epidemiologia5040048 - 18 Nov 2024
Viewed by 152
Abstract
Background: The purpose of this study was to compare the opinions of biomedical students from Russia and Central Serbia about learning methods in the time of the COVID-19 pandemic. Methods: This is a comparative questionnaire study that used the validated questionnaire tool eMedQ, [...] Read more.
Background: The purpose of this study was to compare the opinions of biomedical students from Russia and Central Serbia about learning methods in the time of the COVID-19 pandemic. Methods: This is a comparative questionnaire study that used the validated questionnaire tool eMedQ, conducted via the online platform Anketolog.ru from February to May 2022 at Sechenov University and the University of Kragujevac in the same period. At Sechenov University, 694 students took part in the survey, while at the University of Kragujevac, the total number of participants was 209. The eMedQ questionnaire, in Russian and Serbian, consists of 45 closed-ended questions with 7 domains: demographic characteristics, experience with online teaching, education process (teaching organization), aspects of mental functioning, clinical skills, technical aspects, and quality of life. Results: During the COVID-19 lockdown, in Serbian and Russian biomedical faculties, we observed the high flexibility of Russian students with greater experience when it comes to online education before the pandemic compared to students from Serbia. Also, the Russian students declared that they were strongly motivated to achieve clinical skills and to learn, while a larger number of Serbian students reported disrupted mental functioning and learning problems. Conclusions: At the time of isolation, at Serbian and Russian biomedical faculties, we noticed the higher flexibility of Russian students with more experience than students from Serbia. Also, the Russian students declared that they were strongly motivated both to acquire clinical skills and to learn, while a larger number of Serbian students reported reduced mental functioning and learning problems. Full article
(This article belongs to the Special Issue Public Mental Health Crisis during SARS-CoV-2 Pandemic—Part 2)
16 pages, 737 KiB  
Article
Does Social Media Make Tourists More like Special Forces? The Impact of Supportive Communication on Generation Z’s Intention to Engage in Special Forces-Style Tourism
by Jianzhen Zhao, Yiyan Wang, Shuaifang Liu, Jun (Justin) Li and Qinglin Wang
Sustainability 2024, 16(22), 10033; https://doi.org/10.3390/su162210033 - 18 Nov 2024
Viewed by 357
Abstract
In the post-COVID-19 era, tourism and cultural industries have begun to bounce back, and their “revenge tourism” desire has forced “Special Forces-style tourism”, which was popularized throughout Chinese social media in 2023. This study explores a current knowledge gap in understanding how social [...] Read more.
In the post-COVID-19 era, tourism and cultural industries have begun to bounce back, and their “revenge tourism” desire has forced “Special Forces-style tourism”, which was popularized throughout Chinese social media in 2023. This study explores a current knowledge gap in understanding how social media inspires Generation Z’s engagement in Special Forces tourism and implications for practical sustainable tourism. By leaning on the SOR model, Social Identity Theory, and Social Learning Theory, this study investigates how supportive and interactive social media environments shape the sustainable engagement intentions of Generation Z. We experimentally find that perceived supportive communication about sustainability issues significantly inflates sustainable engagement intentions in high-interactivity settings, by encouraging flow experiences and vicarious reinforcement that facilitate socially responsible travel decisions. Key findings include identification of supportive online interactions that can facilitate sustainable tourism among born-digital travelers, who enable informed, socially and environmentally responsible tourism behaviors. Full article
(This article belongs to the Section Tourism, Culture, and Heritage)
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<p>Research model.</p>
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<p>The moderating role of vicarious reinforcement between perceived supportive communication and Special Forces-style tourism intentions.</p>
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13 pages, 429 KiB  
Article
Perceptions of New Jersey Teachers About Mental Health and School Services Offered During the COVID-19 Pandemic
by Maryanne L. Campbell, Juhi Aggarwal, Kimberly T. Nguyen, Midhat Rehman and Derek G. Shendell
Future 2024, 2(4), 172-184; https://doi.org/10.3390/future2040014 - 18 Nov 2024
Viewed by 428
Abstract
During the COVID-19 pandemic, the New Jersey Safe Schools Program (NJSS) surveyed a subset of newer NJ high school (HS) teachers who completed NJSS work-based learning supervisory trainings from October 2021 to June 2023. The purpose of this study was to gain insight [...] Read more.
During the COVID-19 pandemic, the New Jersey Safe Schools Program (NJSS) surveyed a subset of newer NJ high school (HS) teachers who completed NJSS work-based learning supervisory trainings from October 2021 to June 2023. The purpose of this study was to gain insight on NJ HS teacher perceptions of school provided mental health services, and well-being supports received during the COVID-19 pandemic. Via online surveys, teachers anonymously identified who should be responsible for supporting mental well-being in schools, satisfaction with existing mental health services, and self-care practices implemented during the COVID-19 pandemic. Of the 114 HS teachers surveyed, nearly 70% would recommend existing school mental health services to colleagues, 53% would like an increase in mental health and counseling services available at their school, and 44% would like their schools to improve mental health literacy. This study presents insight into the needs teachers expressed for appropriate school mental health support and services. Data will inform guidance for how to better address identified needs, including employee wellness, and creating positive social and emotional school environments. School districts should prioritize the implementation of suitable and equitable school-based mental health services to teachers and students alike to promote healthy and productive school environments. Full article
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<p>Desired mental health supports in school. Teachers were asked to select mental health supports they would like to see at their school as schools transitioned back to full-time, in-person learning (<span class="html-italic">n</span> = 114; <span class="html-italic">n</span> = 100 without missing data).</p>
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18 pages, 1669 KiB  
Article
FETrack: Feature-Enhanced Transformer Network for Visual Object Tracking
by Hang Liu, Detian Huang and Mingxin Lin
Appl. Sci. 2024, 14(22), 10589; https://doi.org/10.3390/app142210589 - 17 Nov 2024
Viewed by 317
Abstract
Visual object tracking is a fundamental task in computer vision, with applications ranging from video surveillance to autonomous driving. Despite recent advances in transformer-based one-stream trackers, unrestricted feature interactions between the template and the search region often introduce background noise into the template, [...] Read more.
Visual object tracking is a fundamental task in computer vision, with applications ranging from video surveillance to autonomous driving. Despite recent advances in transformer-based one-stream trackers, unrestricted feature interactions between the template and the search region often introduce background noise into the template, degrading the tracking performance. To address this issue, we propose FETrack, a feature-enhanced transformer-based network for visual object tracking. Specifically, we incorporate an independent template stream in the encoder of the one-stream tracker to acquire the high-quality template features while suppressing the harmful background noise effectively. Then, we employ a sequence-learning-based causal transformer in the decoder to generate the bounding box autoregressively, simplifying the prediction head network. Further, we present a dynamic threshold-based online template-updating strategy and a template-filtering approach to boost tracking robustness and reduce redundant computations. Extensive experiments demonstrate that our FETrack achieves a superior performance over state-of-the-art trackers. Specifically, the proposed FETrack achieves a 75.1% AO on GOT-10k, 81.2% AUC on LaSOT, and 89.3% Pnorm on TrackingNet. Full article
(This article belongs to the Special Issue Applications in Computer Vision and Image Processing)
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<p>Network architecture of the proposed FETrack. The components of FETrack consist of a transformer-based encoder and decoder. The former is responsible for capturing visual features of input images, while the latter generates the sequence of bounding box tokens autoregressively.</p>
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<p>The structure of encoder and decoder modules. In the encoder, an independent template stream is embedded to prevent potential background interference. In the decoder, a masked multi-head self-attention layer is used to maintain the causality of the token sequence, and a multi-head cross-attention layer is used to integrate visual features from the encoder. The symbols C and + represent concatenate and addition, respectively.</p>
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<p>Comparison of template features between two-stream (T-S) and one-stream (O-S) pipelines.</p>
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<p>Schematic diagram of the proposed template-filtering (TF) approach. The TF reduces the background noise, enabling the template image to focus more on the target.</p>
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<p>Comparison of attention maps of different layers of the encoder. The two rows of attention maps corresponding to each search region are the attention from the search region to the template in different blocks of the encoder of our FETrack and OSTrack, respectively.</p>
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<p>Cross-attention map of the decoder. (<b>a</b>) Search region. (<b>b</b>–<b>e</b>) Cross-attention map of the target token to the search region in the last layer of the decoder.</p>
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<p>Visual comparisons between our FETrack and other state-of-the-art trackers on four representative sequences (i.e., bird-2, crab-3, glraffa-2, and kite-10) of the LaSOT dataset. Different color rectangular boxes are used to mark the results obtained by different trackers, and the frame numbers are displayed in the upper left corner of each frame. These results validate the robustness of our tracker against challenges such as scale variation, similar targets, and occlusion.</p>
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<p>Comparison of the success rate with state-of-the-art trackers on eleven challenging attributes, including Illumination Variation, scale variation, occlusion, Deformation, Motion Blur, fast motion, In-Plane Rotation, Out-of-Plane Rotation, out of view, background clutter, and Low Resolution, and all attributes (ALL) in the OTB100 dataset. Where different colored lines represent the success rate obtained by different trackers in the corresponding attribute, and the value under the attribute represents the best success rate obtained by all trackers in this attribute</p>
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