Bacteriophage Sf14 neck C6 reconstruction
Subramanian S, Kerns HR, Braverman SG, Doore SM
To Be Published
- Gp119 (22 kDa, Protein from Shigella phage Sf14)
- Shigella phage sf14 (Virus from Shigella phage Sf14)
- Putative structural protein (48 kDa, Protein from Shigella phage Sf14)
- Portal protein (55 kDa, Protein from Shigella phage Sf14)
- Phage protein (11 kDa, Protein from Shigella phage Sf14)
- Gp127 (18 kDa, Protein from Shigella phage Sf14)
- Gp40 (16 kDa, Protein from Shigella phage Sf14)
- Phage protein (17 kDa, Protein from Shigella phage Sf14)
- Head-closure protein (15 kDa, Protein from Shigella phage Sf14)
Cryo-EM Structure of Bacteriophage FCWL1 head-to-tail interface
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9jlf
Q-score: 0.451
Cai C, Wang Y, Liu Y, Shao Q, Wang A, Li L, Zheng Y, Zhang T, Luo Z, Yang C, Fang Q
To Be Published
- Tail tube protein (24 kDa, Protein from Escherichia phage FCWL1)
- Terminator protein (15 kDa, Protein from Escherichia phage FCWL1)
- Escherichia phage fcwl1 (Virus from Escherichia phage FCWL1)
- Connector protein (13 kDa, Protein from Escherichia phage FCWL1)
- Adaptor protein (15 kDa, Protein from Escherichia phage FCWL1)
- Portal protein (49 kDa, Protein from Escherichia phage FCWL1)
The Composite Cryo-EM Structure of the Portal Vertex of Bacteriophage FCWL1
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9kmh
Q-score: 0.475
Cai C, Wang Y, Liu Y, Shao Q, Wang A, Li L, Zheng Y, Zhang T, Luo Z, Yang C, Fang Q
To Be Published
- Major capsid protein (35 kDa, Protein from Escherichia phage FCWL1)
- Tail tube protein (24 kDa, Protein from Escherichia phage FCWL1)
- Terminator protein (15 kDa, Protein from Escherichia phage FCWL1)
- Decoration protein gp29 (26 kDa, Protein from Escherichia phage FCWL1)
- Escherichia phage fcwl1 (Virus from Escherichia phage FCWL1)
- Connector protein (13 kDa, Protein from Escherichia phage FCWL1)
- Adaptor protein (15 kDa, Protein from Escherichia phage FCWL1)
- Decoration protein (17 kDa, Protein from Escherichia phage FCWL1)
- Portal protein (49 kDa, Protein from Escherichia phage FCWL1)
Shigella flexneri bacteriophage Moo19 Tail
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9d80
Q-score: 0.241
Subramanian S, Bergland Drarvik SM, Tinney KR, Doore SM, Parent KN
Sci Adv (2024) 10 pp. eadt0022-eadt0022 [ Pubmed: 39693418 DOI: doi:10.1126/sciadv.adt0022 ]
- Tail protein (30 kDa, Protein from Shigella virus Moo19)
- Tail fiber protein (118 kDa, Protein from Shigella virus Moo19)
- Portal protein (85 kDa, Protein from Shigella virus Moo19)
- Shigella virus moo19 (Virus from Shigella virus Moo19)
- Gp83 (26 kDa, Protein from Shigella virus Moo19)
Shigella flexneri bacteriophage B2 tail
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9d83
Q-score: 0.239
Subramanian S, Bergland Drarvik SM, Tinney KR, Doore SM, Parent KN
Sci Adv (2024) 10 pp. eadt0022-eadt0022 [ Pubmed: 39693418 DOI: doi:10.1126/sciadv.adt0022 ]
- Head to tail adaptor gp50 (26 kDa, Protein from Shigella phage B2)
- Gp34 (22 kDa, Protein from Shigella phage B2)
- Shigella phage b2 (Virus from Shigella phage B2)
- Portal protein gp39 (79 kDa, Protein from Shigella phage B2)
- Gp49 (44 kDa, Protein from Shigella phage B2)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8xb5
Q-score: 0.504
To Be Published
Portal-vertex of SH-Ab15497 in C1 symmetry
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8xb6
Q-score: 0.403
To Be Published
- Portal protein (57 kDa, Protein from Acinetobacter phage SH-Ab 15497)
- Acinetobacter phage sh-ab 15497 (Virus from Acinetobacter phage SH-Ab 15497)
- Major capsid protein (34 kDa, Protein from Acinetobacter phage SH-Ab 15497)
portal-tail complex of mature T7
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9jyz
Q-score: 0.613
To Be Published
- Tail tubular protein gp11 (22 kDa, Protein from Escherichia phage T7)
- Protein 6.7 (9 kDa, Protein from Escherichia phage T7)
- Tail fiber protein (61 kDa, Protein from Escherichia phage T7)
- Portal protein (59 kDa, Protein from Escherichia phage T7)
- Protein 7.3 (10 kDa, Protein from Escherichia phage T7)
- Escherichia phage t7 (Virus from Escherichia phage T7)
- Tail tubular protein gp12 (89 kDa, Protein from Escherichia phage T7)
portal-tail complex of DNA-ejected T7
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9jz0
Q-score: 0.475
To Be Published
- Portal protein (59 kDa, Protein from Escherichia phage T7)
- Protein 6.7 (9 kDa, Protein from Escherichia phage T7)
- Tail tubular protein gp11 (22 kDa, Protein from Escherichia phage T7)
- Tail fiber protein (61 kDa, Protein from Escherichia phage T7)
- Escherichia phage t7 (Virus from Escherichia phage T7)
- Internal virion protein gp14 (20 kDa, Protein from Escherichia phage T7)
- Tail tubular protein gp12 (89 kDa, Protein from Escherichia phage T7)
Neck and tail of phage 812 virion (composite)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8r69
Q-score: 0.356
Cienikova Z, Novacek J, Siborova M, Popelarova B, Fuzik T, Benesik M, Bardy P, Pantucek R, Plevka P
To Be Published
- Staphylococcus phage 812 (Virus from Staphylococcus phage 812)
- Baseplate hub assembly protein (31 kDa, Protein from Staphylococcus phage 812)
- Non-cytoplasmic protein (17 kDa, Protein from Staphylococcus phage 812)
- Putative neck protein (34 kDa, Protein from Staphylococcus phage 812)
- Zinc ion (65 Da, Ligand)
- Putative non-cytoplasmic protein (10 kDa, Protein from Staphylococcus phage 812)
- Portal protein (64 kDa, Protein from Staphylococcus phage 812)
- Capsid protein (15 kDa, Protein from Staphylococcus phage 812)
- Capsid protein (33 kDa, Protein from Staphylococcus phage 812)
- Major tail sheath protein (64 kDa, Protein from Staphylococcus phage 812)