Cryo-EM Structure of Bacteriophage FCWL1 head-to-tail interface
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9jlf
Q-score: 0.451
Cai C, Wang Y, Liu Y, Shao Q, Wang A, Li L, Zheng Y, Zhang T, Luo Z, Yang C, Fang Q
To Be Published
- Tail tube protein (24 kDa, Protein from Escherichia phage FCWL1)
- Terminator protein (15 kDa, Protein from Escherichia phage FCWL1)
- Escherichia phage fcwl1 (Virus from Escherichia phage FCWL1)
- Connector protein (13 kDa, Protein from Escherichia phage FCWL1)
- Adaptor protein (15 kDa, Protein from Escherichia phage FCWL1)
- Portal protein (49 kDa, Protein from Escherichia phage FCWL1)
Cryo-EM Structure of Bacteriophage FCWL1 Capsid
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9kmg
Q-score: 0.587
Cai C, Wang Y, Liu Y, Shao Q, Wang A, Li L, Zheng Y, Zhang T, Luo Z, Yang C, Fang Q
To Be Published
- Decoration protein (17 kDa, Protein from Escherichia phage FCWL1)
- Major capsid protein (35 kDa, Protein from Escherichia phage FCWL1)
- Escherichia phage fcwl1 (Virus from Escherichia phage FCWL1)
The Composite Cryo-EM Structure of the Portal Vertex of Bacteriophage FCWL1
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9kmh
Q-score: 0.475
Cai C, Wang Y, Liu Y, Shao Q, Wang A, Li L, Zheng Y, Zhang T, Luo Z, Yang C, Fang Q
To Be Published
- Major capsid protein (35 kDa, Protein from Escherichia phage FCWL1)
- Tail tube protein (24 kDa, Protein from Escherichia phage FCWL1)
- Terminator protein (15 kDa, Protein from Escherichia phage FCWL1)
- Decoration protein gp29 (26 kDa, Protein from Escherichia phage FCWL1)
- Escherichia phage fcwl1 (Virus from Escherichia phage FCWL1)
- Connector protein (13 kDa, Protein from Escherichia phage FCWL1)
- Adaptor protein (15 kDa, Protein from Escherichia phage FCWL1)
- Decoration protein (17 kDa, Protein from Escherichia phage FCWL1)
- Portal protein (49 kDa, Protein from Escherichia phage FCWL1)
Structure of SARS-CoV-2 Spike in complex with antibodies 3E2, 9G11 and 13H7 (C1)
Jiang W, Jiang Y, Sun H, Deng T, Yu K, Fang Q, Ge H, Lan M, Lin Y, Fang Z, Zhang Y, Zhou L, Li T, Yu H, Zheng Q, Li S, Xia N, Gu Y
Emerg Microbes Infect (2024) 13 pp. 2406300-2406300 [ DOI: doi:10.1080/22221751.2024.2406300 Pubmed: 39470577 ]
- The fab of 13h7 (Complex from Mus)
- Sars-cov-2 spike in complex with 3e2, 9g11 and 13h7 fab (Complex)
- Sars-cov-2 spike (Complex from Homo sapiens)
- The fab of 9g11 (Complex from Mus)
- The fab of 3e2 (Complex)
Cryo-EM structure of the FB1-bound Lac1-Lip1 complex
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8y2m
Q-score: 0.499
Zhang Z, Fang Q, Xie T, Gong X
Structure (2024) 32 pp. 1419-1428.e4 [ Pubmed: 38964337 DOI: doi:10.1016/j.str.2024.06.002 ]
- (4s,7r)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Fb1-bound lac1-lip1 complex (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- (2~{r})-2-[2-[(5~{r},6~{r},7~{s},9~{s},11~{r},16~{r},18~{s},19~{s})-19-azanyl-6-[(3~{r})-3-carboxy-5-oxidanyl-5-oxidanylidene-pentanoyl]oxy-5,9-dimethyl-11,16,18-tris(oxidanyl)icosan-7-yl]oxy-2-oxidanylidene-ethyl]butanedioic acid (721 Da, Ligand)
- Hexacosanoic acid (396 Da, Ligand)
- Ceramide synthase lac1 (50 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ceramide synthase subunit lip1 (17 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of the apo Lac1-Lip1 complex
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 8y2n
Q-score: 0.492
Zhang Z, Fang Q, Xie T, Gong X
Structure (2024) 32 pp. 1419-1428.e4 [ Pubmed: 38964337 DOI: doi:10.1016/j.str.2024.06.002 ]
- (4s,7r)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Ceramide synthase lac1 (50 kDa, Protein from Saccharomyces cerevisiae S288C)
- Lac1-lip1 complex (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ceramide synthase subunit lip1 (17 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of the C26-FB1-bound Lac1-Lip1 complex
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 8zb1
Q-score: 0.556
Zhang Z, Fang Q, Xie T, Gong X
Structure (2024) 32 pp. 1419-1428.e4 [ Pubmed: 38964337 DOI: doi:10.1016/j.str.2024.06.002 ]
- Lac1-lip1 complex (Complex from Saccharomyces cerevisiae (strain YJM789))
- (2~{r})-2-[2-[(5~{r},6~{r},7~{s},9~{s},11~{r},16~{r},18~{s},19~{s})-6-[(3~{r})-3-carboxy-5-oxidanyl-5-oxidanylidene-pentanoyl]oxy-19-(hexacosanoylamino)-5,9-dimethyl-11,16,18-tris(oxidanyl)icosan-7-yl]oxy-2-oxidanylidene-ethyl]butanedioic acid (1 kDa, Ligand)
- (4s,7r)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Ceramide synthase lac1 (50 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ceramide synthase subunit lip1 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))