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WO2020096301A1 - Recombination vector based on newcastle disease virus isolated from domestic wild ducks, and method for producing same - Google Patents

Recombination vector based on newcastle disease virus isolated from domestic wild ducks, and method for producing same Download PDF

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WO2020096301A1
WO2020096301A1 PCT/KR2019/014818 KR2019014818W WO2020096301A1 WO 2020096301 A1 WO2020096301 A1 WO 2020096301A1 KR 2019014818 W KR2019014818 W KR 2019014818W WO 2020096301 A1 WO2020096301 A1 WO 2020096301A1
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nucleotide sequence
protein
newcastle disease
virus
disease virus
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Korean (ko)
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박만성
김진일
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고려대학교 산학협력단
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/66General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
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    • C12N7/00Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof

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  • the present invention relates to a recombinant vector prepared by inserting a full-length gene of a novel Newcastle disease virus isolated from a domestic wild duck and a method for manufacturing the same.
  • Newcastle disease virus is a negative sense single-stranded RNA virus that is a contagious virus belonging to the genus Paramyxoviridae, Mononegavirales, and Avulavirus to be.
  • the virus is a highly contagious virus that occurs well in poultry, especially chickens and ducks. In Korea, it has a high incidence and is recommended to be vaccinated against NDV worldwide by governments.
  • the length of the genome is 15,186 nucleotides.
  • NDV contains six transcription units that encode other viral proteins in the genome: nucleocapsid protein (NP), phosphoprotein (P), matrix (M), fusion protein (F), and hemagglutinin neuraminidase ( HN) and polymerase (L).
  • mRNA encoded by these transcription units catalyzes viral RNA-dependent RNA polymerase in the cytoplasm of infected cells. All transcription units are flanked by conserved gene initiation and gene end sequences. In the course of viral replication, mRNA synthesis causes a gradient in mRNA transcription, where genes close to the 3 'end, such as NP, are transcribed more than genes located far from the 3' end, such as L. Thus, the expression level of the new transcription unit will depend on its position relative to the 3 'end.
  • the Newcastle disease virus has an envelope, the HN protein that allows the virus to bind to the host cell and the F protein that causes the fusion of the envelope with the host cell.
  • F protein and HN protein are glycoproteins that are distributed on the surface of the envelope.
  • F protein Type membrane glycoprotein (type membrane glycoprotein) to form a trimeric structure.
  • the F protein is made into an inactive precursor form (F0) and is cleaved into the active forms F1 and F2 while traveling through the Golgi membranes. This process exposes the hydrophobic domain at the amino terminus of the F1 subunit, which plays an important role in the biological activity of the mature protein.
  • the hydrophobic domain called the fusion peptide, is highly conserved in the paramyxovirus F protein and is believed to be directly involved in mediating membrane fusion.
  • the paramyxovirus F protein has several common structural forms, including seven repeats (heptad repeats) and two regions likely to form an alpha helix structure.
  • the longest seven repeat A is adjacent to the hydrophobic fusion peptide at the amino terminus of F1
  • the seven repeats B are in close contact with the upper part of the transmembrane region.
  • the 7 repeats B consisted of a sequence of highly conserved leucine or isoleucine every 7 residues.
  • NDV infects various poultry species. It causes severe respiratory and nervous system diseases in many types of poultry species.
  • the strains of NDV were classified according to their virulence: a lentogenic strain causing an unsigned infection in birds; Mesogenic strains causing respiratory diseases in birds; A velogenic strain that causes a blistering infection, often accompanied by signs of the nervous system in birds.
  • Several pharmacopathogenic strains of NDV have recently been used as live attenuated vaccines in chickens.
  • Ideal vaccines to protect the general public or poultry from infectious diseases are vaccines that are easily prepared and rapidly trigger a strong protective immune response.
  • Live virus vaccines have been demonstrated to be effective against a variety of viral diseases and have induced strong persistent humoral and cellular immune responses.
  • Recombinant NDV is a good candidate for use as a live virus vaccine vector because it is not pathogenic to humans, humans have no previous immunity to it, and easily grows in embryonated eggs for large-scale production.
  • An object of the present invention is to provide a recombinant vector in which the full-length gene of Newcastle disease virus is inserted, which is more productive than the B1 strain or Lasota strain used as a conventional Newcastle disease virus vaccine strain, and a method for manufacturing the same.
  • a method for preparing a recombinant vector in which the full-length gene sequence of the Newcastle disease virus KU001 strain (Accession No: KCTC18794P) is inserted, comprising the following steps, using cDNA using RNA extracted from Newcastle disease virus.
  • the nucleotide sequence encoding the NP protein, the base sequence encoding the P protein, the base sequence encoding the M protein, the base sequence encoding the F protein, the base sequence encoding the HN protein, and the base sequence encoding the L protein are sequentially Inserting into the plasmid; It includes, wherein the recombinant vector is made of a nucleotide sequence of SEQ ID NO: 1, a method for producing a recombinant vector is provided.
  • the nucleotide sequence encoding the NP protein consists of the nucleotide sequence of SEQ ID NO: 2
  • the nucleotide sequence encoding the P protein consists of the nucleotide sequence of SEQ ID NO: 3
  • the base encoding the M protein The sequence consists of the nucleotide sequence of SEQ ID NO: 4
  • the nucleotide sequence encoding the F protein consists of the nucleotide sequence of SEQ ID NO: 5
  • the nucleotide sequence encoding the HN protein consists of the nucleotide sequence of SEQ ID NO: 6
  • the nucleotide sequence encoding the L protein may be composed of the nucleotide sequence of SEQ ID NO: 7.
  • the Newcastle disease virus KU001 strain may be isolated from domestic wild ducks.
  • a full-length gene sequence of the Newcastle disease virus KU001 strain (Accession number: KCTC18794P) is inserted, and a recombinant vector consisting of the nucleotide sequence of SEQ ID NO: 1 is provided.
  • the recombinant vector may be a plasmid vector.
  • the vector produced by the method for preparing a recombinant vector of the present invention includes a full-length gene of Newcastle disease virus, and thus is used as a backbone vector for the production of multivalent vaccines that can prevent diseases such as avian influenza as well as Newcastle disease. Can be used.
  • the recombinant virus prepared from the recombinant vector of the present invention has superior productivity compared to the B1 strain or the Lasota strain used as the existing Newcastle disease virus vaccine strain, thereby reducing production cost during mass production of the recombinant virus using the recombinant vector of the present invention. This is possible.
  • FIG. 1 is a schematic diagram of a recombinant vector of the present invention.
  • Figure 2 is a schematic diagram of the recombinant vector construction process of the present invention.
  • Figure 3 shows a phylogenetic tree analysis table using the fusion protein (F) sequence of Newcastle disease virus.
  • Figure 4a is a diagram showing a method for confirming whether or not the recombinant vector of the present invention is constructed using PCR technique
  • Figures 4b to 4d are results of confirming fragments using P1 / P2, P4 / P6, and P10 / P12 primers, respectively. .
  • 5A and 5B confirm whether a recombinant virus is produced from the recombinant vector of the present invention using RT-PCR technique.
  • 6A and 6B confirm whether a recombinant virus is produced from the recombinant vector of the present invention using a Genetic tag (NotI).
  • Figure 7 shows the existing Newcastle disease virus (rNDV / B1 / wt (rB1 wt), rNDV / Lasota / wt (rLasota wt))
  • cDNA refers to DNA complementary to mRNA, and preferably refers to DNA having a base sequence complementary to mRNA of Newcastle disease virus.
  • the term "vector” is a means for introducing a foreign gene and allowing the expression of the foreign gene, a plasmid vector capable of replicating itself, a cosmid vector, a bacteriophage vector, and an adenovirus.
  • the term "restriction enzyme (restriction enzyme)” is an endonuclease (endonuclease) that is one of the nucleases that recognize a specific nucleotide sequence of DNA or RNA and cleaves the base chain. It means a special enzyme used to make.
  • primer refers to a DNA or RNA having a short gene sequence complementary to a specific gene sequence to be synthesized, means that it is synthesized for use in PCR, DNA sequencing, and the like.
  • the term "promotor (promotor)” refers to the region on the DNA that initiates transcription by specifically binding RNA polymerase.
  • the promoter is not only a basic factor (basal element) required for transcription, but also expression of Enhancers that can be used for palpation and control may be further included.
  • a method for preparing a recombinant vector in which the full-length gene sequence of the Newcastle disease virus KU001 strain (Accession No: KCTC18794P) is inserted, comprising the following steps, using cDNA using RNA extracted from Newcastle disease virus.
  • the nucleotide sequence encoding the NP protein, the base sequence encoding the P protein, the base sequence encoding the M protein, the base sequence encoding the F protein, the base sequence encoding the HN protein, and the base sequence encoding the L protein are sequentially Inserting into the plasmid; It includes, wherein the recombinant vector is made of a nucleotide sequence of SEQ ID NO: 1, a method for producing a recombinant vector is provided.
  • the nucleotide sequence encoding the NP protein consists of the nucleotide sequence of SEQ ID NO: 2
  • the nucleotide sequence encoding the P protein consists of the nucleotide sequence of SEQ ID NO: 3
  • the nucleotide sequence encoding the M protein is SEQ ID NO: 4
  • Consisting of the nucleotide sequence of the the nucleotide sequence encoding the F protein consists of the nucleotide sequence of SEQ ID NO: 5
  • the nucleotide sequence encoding the HN protein consists of the nucleotide sequence of SEQ ID NO: 6, encoding the L protein
  • the base sequence may be composed of the base sequence of SEQ ID NO: 7.
  • the Newcastle disease virus KU001 strain is isolated from domestic wild ducks, and refers to a strain that has been granted accession number KCTC18794P from the Korea Research Institute of Bioscience and Biotechnology (181, Ipsin-gil, Jeongeup-si, Jeollabuk-do, Korea) as of October 31, 2019.
  • the genotype corresponds to Genotype I (Fig. 3). Since the recombinant vector of the present invention contains the full-length gene of NDV / KU001 strain isolated from domestic wild ducks, it is possible to prepare a recombinant virus vaccine effective for the prevention of the Newcastle disease virus that is prevalent in Korea when it is used as a backbone vector.
  • a full-length gene of the Newcastle disease virus KU001 strain (Accession number: KCTC18794P) is inserted, and a recombinant vector consisting of the nucleotide sequence of SEQ ID NO: 1 is provided.
  • the recombinant vector may be a plasmid vector, but a pSL1180 vector may be used, but is not limited thereto.
  • the recombinant vector of the present invention can be used to prepare a recombinant virus by reverse genetics.
  • the method for producing a specific recombinant virus is as follows. First, in order to provide a T7 RNA polymerase, a virus (MVA / T7 virus) expressing T7 RNA polymerase in a Modified Vaccinia Ankara strain is infected with Hep-2 or A549 cells. Three plasmids (NP, P. L) expressing NDV RNA polymerase protein and the recombinant vector pNDV / KU001 of the present invention are simultaneously transfected into the Hep-2 or A549 cells.
  • CEF chicken embryo fibroblast
  • RNA was extracted using TRIzol (Invitrogen, USA) from Newcastle disease virus KU001, and then reverse transcription PCR was performed with Superscript TM II Reverse Transcriptase (Invitrogen, USA) to synthesize cDNA. .
  • a PCR technique was performed as described in FIG. 4A.
  • NP-P-M-F and HN-L sections were used as controls.
  • the primers used were P1 / P2 (Fig. 4b), P4 / P6 (Fig. 4c), and P10 / P12 (Fig. 4d).
  • Primer P1 used (forward direction; 5'-ACCAAACAGAGAATCCGTGAG-3 ') is the sequencing information in front of the NP gene of NDV
  • P2 reverse direction; 5'-AGATGAGGGGGTTCGTTTGTAG-3'
  • P4 forward direction; 5'-CGCGCCGTCGCAGTGACC-3 '
  • P6 reverse direction; 5'-CGTTTCCCACCGAACCGC-3'
  • P10 forward direction; 5'- ACCGACCCCAACACAGTTCC-3 '
  • P12 reverse direction; 5'- ACCAAACAAAGATTTGGTG-3 '
  • Example 3 Verification of the production of recombinant virus
  • r of rNDV represents recombinant
  • rNDV means recombinant virus
  • the rNDV / KU001 virus was prepared by the reverse genetics method described below.
  • a virus (MVA / T7 virus) expressing T7 RNA polymerase in a Modified Vaccinia Ankara strain was infected with Hep-2 or A549 cells.
  • the pNDV / KU001 vector constructed in Example 1 and three plasmids expressing NP, P, and L proteins were transfected into infected Hep-2 or A549 cells. After incubation for more than 48 hours.
  • Chicken embryo fibroblast (CEF) cells were added and co-cultured for 2-3 days.
  • the cell supernatant was obtained and inoculated into the allantoic cavity of 9-10-day-old chicken eggs, and again after 2-3 days, the allantoic fluid was obtained to perform the hemagglutination assay and hemagglutination-inhibition assay to confirm the presence of the virus.
  • the rNDV / KU001 virus produced by the reverse genetics method has a NotI restriction enzyme recognition site that is not found in the wild type NDV KU001 strain, so NotI was used as a genetic marker to distinguish the wild type virus from the recombinant virus produced by the reverse genetics method. .
  • RT-PCR was performed to obtain a PCR gene product containing NotI restriction enzyme (FIG. 6A), and the gene product was treated with restriction enzyme NotI (FIG. 6B).
  • the rNDV / KU001 virus produced by the reverse genetics method is not a wild type NDV KU001 strain, but is a new virus derived from the recombinant vector of the present invention.
  • Example 4 Evaluation of productivity of recombinant virus
  • the recombinant NDV KU001 virus prepared in Example 3 and the Newcastle disease virus B1 strain and Lasota strain used as existing vaccine strains were prepared, and each virus was infected with 10-day-old fertilized eggs at a titer of 100 TCID 50 . After 12, 24, 48 and 72 hours from viral infection, urine was obtained from the fertilized egg, and the viral titer was measured by Hemagglutinin assay (HA), and the results are shown in FIG. 7.
  • HA Hemagglutinin assay
  • gatgagggcc actacaaaaa tgtgaatgcg gatgagaggc agaaacatcc ccaatagcag 6240
  • caatatttag cacttggtgt gcttcggaca tctgcaacag ggagggtatt cttttccact 7080
  • gagattctca aggatgatgg ggttagagaa gccaggtcta gccggttgag tcaactgcga 8160
  • caacataata tcatccacgg cggcacatct caggagccta tcagagaaaa ttgatgacat 9180
  • caacattgca tctactatag cacggctgtg cgagaacggg cttccaaagg atttctgtta 10980
  • tactgcgcta attgaagccg ggggacaacc cgtccgtcca ttctgtgcag agagcttggt 14520
  • gacatctctt ttgtgcactc atatgtcctg acccctgccc agctaggggg actgagcaac 2760

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Abstract

The present invention pertains to: a recombination vector produced by inserting the full-length gene of a novel Newcastle disease virus strain KU001 (Accession Number: KCTC18794P) isolated from domestic wild ducks; and a method for producing same.

Description

국내 야생 오리에서 분리된 뉴캐슬병 바이러스 재조합 벡터 및 이의 제조방법Recombinant vector of Newcastle disease virus isolated from wild ducks in Korea and its preparation method
본 발명은 국내 야생 오리에서 분리된 신규한 뉴캐슬병 바이러스의 전장 유전자를 삽입하여 제조한 재조합 벡터 및 이의 제조방법에 관한 것이다.The present invention relates to a recombinant vector prepared by inserting a full-length gene of a novel Newcastle disease virus isolated from a domestic wild duck and a method for manufacturing the same.
뉴캐슬병 바이러스(NDV, Newcastle disease virus)는 음성(negative sense) 단일가닥 RNA 바이러스로 파라믹소비리다에(Paramyxoviridae) 과, 모노네가바이랄러스(Mononegavirales) 목, 아불라바이러스(Avulavirus) 속에 속하는 전염성 바이러스이다. 이 바이러스는 가금류, 특히 닭이나 오리에서 잘 발생하는 전염성이 강한 바이러스이며, 한국에서도 발병률이 높고 전 세계적으로 NDV에 대한 백신은 각국 정부가 의무적으로 접종도록 권고하고 있다. 유전체의 길이는 15,186 뉴클레오타이드다. NDV는 유전체 내에 다른 바이러스 단백질을 코딩하는 6개의 전사 단위체, 즉 뉴클레오캡시드 단백질(NP), 인단백질(P), 매트릭스 (M), 융합 단백질(F), 헤마글루티닌 뉴라미니다제(HN), 폴리머라제(L)를 가지고 있다. 이들 전사 단위체에 의하여 코딩되는 mRNA의 합성은 감염된 세포의 세포질에서 바이러스 RNA-의존성 RNA 폴리머라제가 촉매작용한다. 모든 전사 단위체는 보존된 유전자 개시점과 유전자 말단 서열에 플랭킹된다. 바이러스 복제 과정에서, mRNA 합성은 mRNA 전사의 기울기를 야기하는데, NP와 같은 3' 말단에 근접한 유전자가 L과 같은 3' 말단에서 멀리 위치한 유전자보다 더 많이 전사된다. 따라서, 새로운 전사 단위체의 발현 수준은 3' 말단에 대한 그것의 위치에 의존할 것이다. Newcastle disease virus (NDV) is a negative sense single-stranded RNA virus that is a contagious virus belonging to the genus Paramyxoviridae, Mononegavirales, and Avulavirus to be. The virus is a highly contagious virus that occurs well in poultry, especially chickens and ducks. In Korea, it has a high incidence and is recommended to be vaccinated against NDV worldwide by governments. The length of the genome is 15,186 nucleotides. NDV contains six transcription units that encode other viral proteins in the genome: nucleocapsid protein (NP), phosphoprotein (P), matrix (M), fusion protein (F), and hemagglutinin neuraminidase ( HN) and polymerase (L). Synthesis of mRNA encoded by these transcription units catalyzes viral RNA-dependent RNA polymerase in the cytoplasm of infected cells. All transcription units are flanked by conserved gene initiation and gene end sequences. In the course of viral replication, mRNA synthesis causes a gradient in mRNA transcription, where genes close to the 3 'end, such as NP, are transcribed more than genes located far from the 3' end, such as L. Thus, the expression level of the new transcription unit will depend on its position relative to the 3 'end.
뉴캐슬병 바이러스는 외피(envelope)을 가지고 있으며 외피에는 바이러스가 숙주 세포에 결합할 수 있도록 해주는 HN 단백질과 외피와 숙주 세포의 융합을 일으키는 F 단백질이 있다. F 단백질과 HN 단백질은 글리코단백질(glycoprotein)로서 외피의 표면에 분포되어 있다.The Newcastle disease virus has an envelope, the HN protein that allows the virus to bind to the host cell and the F protein that causes the fusion of the envelope with the host cell. F protein and HN protein are glycoproteins that are distributed on the surface of the envelope.
F 단백질은
Figure PCTKR2019014818-appb-img-000001
형 막 글리코단백질(type
Figure PCTKR2019014818-appb-img-000002
membrane glycoprotein)로써 삼합체(trimeric) 구조를 형성한다. F 단백질은 비활성 전구체 형태(F0)로 만들어지고 골지막(Golgi membranes)을 통해 이동하는 동안 활성 형태인 F1과 F2로 절단된다. 이러한 과정은 F1 소단위체(subunit)의 아미노 말단에서 소수성 도메인을 노출시키고 이것은 성숙한 단백질의 생물학적 활성에 중요한 역할을 한다. 융합 펩티드(fusion peptide)라 불리는 소수성 도메인은 파라믹소바이러스(paramyxovirus) F 단백질에서 매우 보존되어 있고 막 융합을 매개하는데 직접적으로 관여하고 있을 것이라 여겨지고 있다. 파라믹소바이러스 F 단백질은 7개 반복(heptad repeats)을 포함하고 알파 헬릭스 구조를 형성할 가능성이 있는 두 지역을 포함하는 여러 개의 공통된 구조 형태를 갖고 있다. 두 반복중 가장 긴 7개 반복 A(heptad repeat A)는 F1의 아미노 말단에서 소수성 융합 펩티드와 인접해 있으며, 7개 반복 B는 막관통(transmembrane) 지역의 윗부분에 밀착하여 있다. 7개 반복 B는 매 7개 잔기마다 매우 보존된 류신 또는 이소류신의 연속으로 구성되어 있다.
F protein
Figure PCTKR2019014818-appb-img-000001
Type membrane glycoprotein (type
Figure PCTKR2019014818-appb-img-000002
membrane glycoprotein) to form a trimeric structure. The F protein is made into an inactive precursor form (F0) and is cleaved into the active forms F1 and F2 while traveling through the Golgi membranes. This process exposes the hydrophobic domain at the amino terminus of the F1 subunit, which plays an important role in the biological activity of the mature protein. The hydrophobic domain, called the fusion peptide, is highly conserved in the paramyxovirus F protein and is believed to be directly involved in mediating membrane fusion. The paramyxovirus F protein has several common structural forms, including seven repeats (heptad repeats) and two regions likely to form an alpha helix structure. Of the two repeats, the longest seven repeat A (heptad repeat A) is adjacent to the hydrophobic fusion peptide at the amino terminus of F1, and the seven repeats B are in close contact with the upper part of the transmembrane region. The 7 repeats B consisted of a sequence of highly conserved leucine or isoleucine every 7 residues.
NDV는 다양한 가금류 종들을 감염시킨다. 많은 종류의 가금류 종에 중증 호흡기 및 신경계 질환을 야기한다. NDV의 균주는 병독성(virulence)에 따라 분류되었다: 조류에 징후없는 감염을 야기시키는 약병원성 균주(lentogenic strain); 조류에 호흡기 질환을 야기시키는 중간병원성 균주(mesogenic strain); 조류에 종종 신경계 징후를 동반한 전격성 감염을 야기하는 강병원성 균주(velogenic strain). NDV의 몇몇 약병원성 균주는 최근 닭에 생약독화된 백신으로 사용되고 있다.NDV infects various poultry species. It causes severe respiratory and nervous system diseases in many types of poultry species. The strains of NDV were classified according to their virulence: a lentogenic strain causing an unsigned infection in birds; Mesogenic strains causing respiratory diseases in birds; A velogenic strain that causes a blistering infection, often accompanied by signs of the nervous system in birds. Several pharmacopathogenic strains of NDV have recently been used as live attenuated vaccines in chickens.
감염질환으로부터 일반 대중 또는 가금류를 보호하기 위한 이상적인 백신은 쉽게 제조되고 강한 보호성 면역반응을 신속하게 야기하는 백신이다. 생바이러스 백신은 다양한 바이러스 질환에 대하여 효과적인 것으로 입증되었으며, 강한 지속성 체액성 면역반응 및 세포성 면역반응을 유도하였다. 재조합 NDV는 사람에 병원성이 없고, 사람은 그것에 대하여 전에 존재한 면역성을 가지고 있지 않으며, 대규모 생산을 위해 계태아(embryonated egg)에서 쉽게 자라기 때문에 생바이러스 백신 벡터로 사용하기 위한 좋은 후보이다.Ideal vaccines to protect the general public or poultry from infectious diseases are vaccines that are easily prepared and rapidly trigger a strong protective immune response. Live virus vaccines have been demonstrated to be effective against a variety of viral diseases and have induced strong persistent humoral and cellular immune responses. Recombinant NDV is a good candidate for use as a live virus vaccine vector because it is not pathogenic to humans, humans have no previous immunity to it, and easily grows in embryonated eggs for large-scale production.
대한민국 등록특허 10-1099629호Republic of Korea Registered Patent 10-1099629
본 발명의 목적은 기존의 뉴캐슬병 바이러스 백신주로 사용되는 B1주 또는 Lasota주에 비해 생산성이 뛰어난 뉴캐슬병 바이러스의 전장 유전자가 삽입된 재조합 벡터와 이의 제조 방법을 제공하는 것이다.An object of the present invention is to provide a recombinant vector in which the full-length gene of Newcastle disease virus is inserted, which is more productive than the B1 strain or Lasota strain used as a conventional Newcastle disease virus vaccine strain, and a method for manufacturing the same.
그러나, 본 발명이 해결하고자 하는 과제는 이상에서 언급한 과제로 제한되지 않으며, 언급되지 않은 또 다른 과제들은 아래의 기재로부터 해당 기술분야의 통상의 지식을 가진 자에게 명확하게 이해될 수 있을 것이다.However, the problems to be solved by the present invention are not limited to the problems mentioned above, and other problems not mentioned will be clearly understood by those having ordinary knowledge in the art from the following description.
본 발명의 일 실시예에 따르면, 하기의 단계를 포함하는 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자 서열이 삽입된 재조합 벡터의 제조방법으로서, 뉴캐슬병 바이러스로부터 추출된 RNA를 이용하여 cDNA를 합성하는 단계; NP 단백질을 코딩하는 염기서열, P 단백질을 코딩하는 염기서열, M 단백질을 코딩하는 염기서열, F 단백질을 코딩하는 염기서열, HN 단백질을 코딩하는 염기서열 및 L 단백질을 코딩하는 염기서열을 순차적으로 플라스미드에 삽입하는 단계; 를 포함하고, 상기 재조합 벡터는 서열번호 1의 염기서열로 이루어지는 것인, 재조합 벡터의 제조방법이 제공된다.According to an embodiment of the present invention, a method for preparing a recombinant vector in which the full-length gene sequence of the Newcastle disease virus KU001 strain (Accession No: KCTC18794P) is inserted, comprising the following steps, using cDNA using RNA extracted from Newcastle disease virus. Synthesizing; The nucleotide sequence encoding the NP protein, the base sequence encoding the P protein, the base sequence encoding the M protein, the base sequence encoding the F protein, the base sequence encoding the HN protein, and the base sequence encoding the L protein are sequentially Inserting into the plasmid; It includes, wherein the recombinant vector is made of a nucleotide sequence of SEQ ID NO: 1, a method for producing a recombinant vector is provided.
일 측에 따르면, 상기 NP 단백질을 코딩하는 염기서열은 서열번호 2의 염기서열로 이루어지고, 상기 P 단백질을 코딩하는 염기서열은 서열번호 3의 염기서열로 이루어지고, 상기 M 단백질을 코딩하는 염기서열은 서열번호 4의 염기서열로 이루어지고, 상기 F 단백질을 코딩하는 염기서열은 서열번호 5의 염기서열로 이루어지고, 상기 HN 단백질을 코딩하는 염기서열은 서열번호 6의 염기서열로 이루어지고, 상기 L 단백질을 코딩하는 염기서열은 서열번호 7의 염기서열로 이루어지는 것일 수 있다.According to one side, the nucleotide sequence encoding the NP protein consists of the nucleotide sequence of SEQ ID NO: 2, the nucleotide sequence encoding the P protein consists of the nucleotide sequence of SEQ ID NO: 3, the base encoding the M protein The sequence consists of the nucleotide sequence of SEQ ID NO: 4, the nucleotide sequence encoding the F protein consists of the nucleotide sequence of SEQ ID NO: 5, the nucleotide sequence encoding the HN protein consists of the nucleotide sequence of SEQ ID NO: 6, The nucleotide sequence encoding the L protein may be composed of the nucleotide sequence of SEQ ID NO: 7.
일 측에 따르면, 상기 뉴캐슬병 바이러스 KU001 주는 국내 야생 오리에서 분리된 것일 수 있다.According to one side, the Newcastle disease virus KU001 strain may be isolated from domestic wild ducks.
본 발명의 다른 일 실시예에 따르면, 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자 서열이 삽입되고, 서열번호 1의 염기서열로 이루어지는, 재조합 벡터가 제공된다.According to another embodiment of the present invention, a full-length gene sequence of the Newcastle disease virus KU001 strain (Accession number: KCTC18794P) is inserted, and a recombinant vector consisting of the nucleotide sequence of SEQ ID NO: 1 is provided.
일 측에 따르면, 상기 재조합 벡터는 플라스미드 벡터일 수 있다.According to one side, the recombinant vector may be a plasmid vector.
본 발명의 재조합 벡터의 제조방법으로 제조된 벡터는 뉴캐슬병 바이러스의전장(full length) 유전자를 포함함으로써, 뉴캐슬병 뿐만 아니라 조류 인플루엔자 등의 질병을 예방할 수 있는 다가 백신의 제조를 위한 백본(backbone) 벡터로 이용될 수 있다.The vector produced by the method for preparing a recombinant vector of the present invention includes a full-length gene of Newcastle disease virus, and thus is used as a backbone vector for the production of multivalent vaccines that can prevent diseases such as avian influenza as well as Newcastle disease. Can be used.
또한, 본 발명의 재조합 벡터로부터 제조된 재조합 바이러스는 기존의 뉴캐슬병 바이러스 백신주로 사용되는 B1주 또는 Lasota주에 비해 생산성이 뛰어나므로, 본 발명의 재조합 벡터를 이용한 재조합 바이러스의 대량생산 시 생산비용의 절감이 가능하다.In addition, the recombinant virus prepared from the recombinant vector of the present invention has superior productivity compared to the B1 strain or the Lasota strain used as the existing Newcastle disease virus vaccine strain, thereby reducing production cost during mass production of the recombinant virus using the recombinant vector of the present invention. This is possible.
본 발명의 효과는 상기한 효과로 한정되는 것은 아니며, 본 발명의 상세한 설명 또는 청구범위에 기재된 발명의 구성으로부터 추론 가능한 모든 효과를 포함하는 것으로 이해되어야 한다.It should be understood that the effects of the present invention are not limited to the above-described effects, and include all effects that can be deduced from the configuration of the invention described in the detailed description or claims of the invention.
도 1은 본 발명의 재조합 벡터의 모식도이다.1 is a schematic diagram of a recombinant vector of the present invention.
도 2는 본 발명의 재조합 벡터 구축 과정을 도식화한 것이다.Figure 2 is a schematic diagram of the recombinant vector construction process of the present invention.
도 3은 뉴캐슬병 바이러스의 융합 단백질(F) 서열을 이용한 계통수 분석표를 나타낸다.Figure 3 shows a phylogenetic tree analysis table using the fusion protein (F) sequence of Newcastle disease virus.
도 4a는 PCR 기법을 이용하여 본 발명의 재조합 벡터 구축 여부를 확인하는 방법을 도식화한 것이고, 도 4b 내지 4d는 각각 P1/P2, P4/P6, P10/P12 프라이머를 이용하여 절편을 확인한 결과이다.Figure 4a is a diagram showing a method for confirming whether or not the recombinant vector of the present invention is constructed using PCR technique, and Figures 4b to 4d are results of confirming fragments using P1 / P2, P4 / P6, and P10 / P12 primers, respectively. .
도 5a 및 도 5b는 RT-PCR 기법을 이용하여 본 발명의 재조합 벡터로부터 재조합 바이러스가 제조되는지 여부를 확인한 것이다.5A and 5B confirm whether a recombinant virus is produced from the recombinant vector of the present invention using RT-PCR technique.
도 6a 및 도 6b는 Genetic tag(NotI)을 이용하여 본 발명의 재조합 벡터로부터 재조합 바이러스가 제조되는지 여부를 확인한 것이다.6A and 6B confirm whether a recombinant virus is produced from the recombinant vector of the present invention using a Genetic tag (NotI).
도 7은 기존 뉴캐슬병 바이러스(rNDV/B1/wt(rB1 wt), rNDV/Lasota/wt(rLasota wt))Figure 7 shows the existing Newcastle disease virus (rNDV / B1 / wt (rB1 wt), rNDV / Lasota / wt (rLasota wt))
와 본 발명의 재조합 벡터로 제조된 바이러스(rKU001)의 성장 특성을 비교한 것이다.And the growth characteristics of the virus (rKU001) produced with the recombinant vector of the present invention.
이하에서, 첨부된 도면을 참조하여 실시예들을 상세하게 설명한다. 각 도면에 제시된 동일한 참조 부호는 동일한 부재를 나타낸다.Hereinafter, embodiments will be described in detail with reference to the accompanying drawings. The same reference numerals in each drawing denote the same members.
아래 설명하는 실시예들에는 다양한 변경이 가해질 수 있다. 아래 설명하는 실시예들은 실시 형태에 대해 한정하려는 것이 아니며, 이들에 대한 모든 변경, 균등물 내지 대체물을 포함하는 것으로 이해되어야 한다.Various changes can be made to the embodiments described below. The examples described below are not intended to be limiting with respect to the embodiments, and should be understood to include all modifications, equivalents, or substitutes thereof.
실시예에서 사용한 용어는 단지 특정한 실시예를 설명하기 위해 사용된 것으로, 실시예를 한정하려는 의도가 아니다. 단수의 표현은 문맥상 명백하게 다르게 뜻하지 않는 한, 복수의 표현을 포함한다. 본 명세서에서, "포함하다" 또는 "가지다" 등의 용어는 명세서 상에 기재된 특징, 숫자, 단계, 동작, 구성 요소, 부품 또는 이들을 조합한 것이 존재함을 지정하려는 것이지, 하나 또는 그 이상의 다른 특징들이나 숫자, 단계, 동작, 구성 요소, 부품 또는 이들을 조합한 것들의 존재 또는 부가 가능성을 미리 배제하지 않는 것으로 이해되어야 한다.The terms used in the examples are only used to describe specific examples, and are not intended to limit the examples. Singular expressions include plural expressions unless the context clearly indicates otherwise. In this specification, the terms "include" or "have" are intended to indicate the presence of features, numbers, steps, actions, components, parts or combinations thereof described in the specification, one or more other features. It should be understood that the existence or addition possibilities of fields or numbers, steps, actions, components, parts or combinations thereof are not excluded in advance.
다르게 정의되지 않는 한, 기술적이거나 과학적인 용어를 포함해서 여기서 사용되는 모든 용어들은 실시예가 속하는 기술 분야에서 통상의 지식을 가진 자에 의해 일반적으로 이해되는 것과 동일한 의미를 가지고 있다. 일반적으로 사용되는 사전에 정의되어 있는 것과 같은 용어들은 관련 기술의 문맥 상 가지는 의미와 일치하는 의미를 가지는 것으로 해석되어야 하며, 본 출원에서 명백하게 정의하지 않는 한, 이상적이거나 과도하게 형식적인 의미로 해석되지 않는다.Unless otherwise defined, all terms used herein, including technical or scientific terms, have the same meaning as commonly understood by a person skilled in the art to which the embodiment belongs. Terms, such as those defined in a commonly used dictionary, should be interpreted as having meanings consistent with meanings in the context of related technologies, and should not be interpreted as ideal or excessively formal meanings unless explicitly defined in the present application. Does not.
또한, 첨부 도면을 참조하여 설명함에 있어, 도면 부호에 관계없이 동일한 구성 요소는 동일한 참조 부호를 부여하고 이에 대한 중복되는 설명은 생략하기로 한다. 실시예를 설명함에 있어서 관련된 공지 기술에 대한 구체적인 설명이 실시예의 요지를 불필요하게 흐릴 수 있다고 판단되는 경우 그 상세한 설명을 생략한다.In addition, in the description with reference to the accompanying drawings, the same components are given the same reference numerals regardless of the reference numerals, and redundant descriptions thereof will be omitted. In describing the embodiments, when it is determined that detailed descriptions of related known technologies may unnecessarily obscure the subject matter of the embodiments, detailed descriptions thereof will be omitted.
본 발명에서 용어 "cDNA"는 mRNA와 상보적인 DNA를 의미하는 것으로, 바람직하게는 뉴캐슬병 바이러스의 mRNA에 상보적인 염기서열을 갖는 DNA를 의미한다.In the present invention, the term "cDNA" refers to DNA complementary to mRNA, and preferably refers to DNA having a base sequence complementary to mRNA of Newcastle disease virus.
본 발명에서 용어 "벡터"란 외래 유전자를 도입하여 외래 유전자가 발현될 수 있게 하는 수단으로써, 스스로 자신을 복제할 수 있는 플라스미드(plasmid) 벡터, 코즈미드(cosmid) 벡터, 박테리오파아지 벡터 및 아데노바이러스 벡터, 레트로바이러스 벡터, 아데노-연관 바이러스 벡터 등을 포함할 수 있다.In the present invention, the term "vector" is a means for introducing a foreign gene and allowing the expression of the foreign gene, a plasmid vector capable of replicating itself, a cosmid vector, a bacteriophage vector, and an adenovirus. Vectors, retroviral vectors, adeno-associated virus vectors, and the like.
본 발명에서 용어 "제한효소(restriction enzyme)"는 DNA 또는 RNA의 특정한 염기배열을 인식하고 염기사슬을 절단하는 핵산분해효소의 하나인 엔도뉴클레아제(endonuclease)로서 유전공학에서 재조합 DNA 또는 RNA를 만들기 위해서 사용하는 특수한 효소를 의미한다.In the present invention, the term "restriction enzyme (restriction enzyme)" is an endonuclease (endonuclease) that is one of the nucleases that recognize a specific nucleotide sequence of DNA or RNA and cleaves the base chain. It means a special enzyme used to make.
본 발명에서 용어 "프라이머(primer)"는 합성하고자 하는 특정 유전자 서열에 대하여 상보적인 짧은 유전자 서열을 갖는 DNA 또는 RNA를 말하는 것으로, PCR, DNA sequencing 등에 이용할 목적으로 합성된 것을 의미한다.In the present invention, the term "primer (primer)" refers to a DNA or RNA having a short gene sequence complementary to a specific gene sequence to be synthesized, means that it is synthesized for use in PCR, DNA sequencing, and the like.
본 발명에서 용어 "프로모터(promotor)"는 RNA 중합효소가 특이적으로 결합하여 전사를 시작하는 DNA 상의 영역을 의미하며, 본 발명에서 프로모터는 전사에 필요한 기본인자(basal element) 뿐만 아니라, 발현의 촉진 및 조절에 사용될 수 있는 인핸서(enhancer)를 추가로 포함할 수 있다.In the present invention, the term "promotor (promotor)" refers to the region on the DNA that initiates transcription by specifically binding RNA polymerase. In the present invention, the promoter is not only a basic factor (basal element) required for transcription, but also expression of Enhancers that can be used for palpation and control may be further included.
본 발명의 일 실시예에 따르면, 하기의 단계를 포함하는 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자 서열이 삽입된 재조합 벡터의 제조방법으로서, 뉴캐슬병 바이러스로부터 추출된 RNA를 이용하여 cDNA를 합성하는 단계; NP 단백질을 코딩하는 염기서열, P 단백질을 코딩하는 염기서열, M 단백질을 코딩하는 염기서열, F 단백질을 코딩하는 염기서열, HN 단백질을 코딩하는 염기서열 및 L 단백질을 코딩하는 염기서열을 순차적으로 플라스미드에 삽입하는 단계; 를 포함하고, 상기 재조합 벡터는 서열번호 1의 염기서열로 이루어지는 것인, 재조합 벡터의 제조방법이 제공된다.According to an embodiment of the present invention, a method for preparing a recombinant vector in which the full-length gene sequence of the Newcastle disease virus KU001 strain (Accession No: KCTC18794P) is inserted, comprising the following steps, using cDNA using RNA extracted from Newcastle disease virus. Synthesizing; The nucleotide sequence encoding the NP protein, the base sequence encoding the P protein, the base sequence encoding the M protein, the base sequence encoding the F protein, the base sequence encoding the HN protein, and the base sequence encoding the L protein are sequentially Inserting into the plasmid; It includes, wherein the recombinant vector is made of a nucleotide sequence of SEQ ID NO: 1, a method for producing a recombinant vector is provided.
상기 NP 단백질을 코딩하는 염기서열은 서열번호 2의 염기서열로 이루어지고, 상기 P 단백질을 코딩하는 염기서열은 서열번호 3의 염기서열로 이루어지고, 상기 M 단백질을 코딩하는 염기서열은 서열번호 4의 염기서열로 이루어지고, 상기 F 단백질을 코딩하는 염기서열은 서열번호 5의 염기서열로 이루어지고, 상기 HN 단백질을 코딩하는 염기서열은 서열번호 6의 염기서열로 이루어지고, 상기 L 단백질을 코딩하는 염기서열은 서열번호 7의 염기서열로 이루어지는 것일 수 있다.The nucleotide sequence encoding the NP protein consists of the nucleotide sequence of SEQ ID NO: 2, the nucleotide sequence encoding the P protein consists of the nucleotide sequence of SEQ ID NO: 3, and the nucleotide sequence encoding the M protein is SEQ ID NO: 4 Consisting of the nucleotide sequence of the, the nucleotide sequence encoding the F protein consists of the nucleotide sequence of SEQ ID NO: 5, the nucleotide sequence encoding the HN protein consists of the nucleotide sequence of SEQ ID NO: 6, encoding the L protein The base sequence may be composed of the base sequence of SEQ ID NO: 7.
상기 뉴캐슬병 바이러스 KU001 주는 국내 야생 오리에서 분리된 것으로, 2019년 10월 31일자로 한국생명공학연구원(대한민국 전라북도 정읍시 입신길 181)에서 수탁번호 KCTC18794P를 부여받은 균주를 의미한다. 유전형은 Genotype I에 해당한다(도 3). 본 발명의 재조합 벡터는 국내 야생 오리에서 분리된 NDV/KU001 주의 전장 유전자를 포함하므로, 이를 백본(backbone) 벡터로 이용하는 경우 국내에서 유행하는 뉴캐슬병 바이러스의 예방에 효과적인 재조합 바이러스 백신을 제조할 수 있다.The Newcastle disease virus KU001 strain is isolated from domestic wild ducks, and refers to a strain that has been granted accession number KCTC18794P from the Korea Research Institute of Bioscience and Biotechnology (181, Ipsin-gil, Jeongeup-si, Jeollabuk-do, Korea) as of October 31, 2019. The genotype corresponds to Genotype I (Fig. 3). Since the recombinant vector of the present invention contains the full-length gene of NDV / KU001 strain isolated from domestic wild ducks, it is possible to prepare a recombinant virus vaccine effective for the prevention of the Newcastle disease virus that is prevalent in Korea when it is used as a backbone vector.
본 발명의 다른 일 실시예에 따르면, 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자가 삽입되고, 서열번호 1의 염기서열로 이루어지는 재조합 벡터가 제공된다. 여기서, 상기 재조합 벡터는 플라스미드 벡터로서, pSL1180 벡터를 이용할 수 있으나 이에 한정되는 것은 아니다.According to another embodiment of the present invention, a full-length gene of the Newcastle disease virus KU001 strain (Accession number: KCTC18794P) is inserted, and a recombinant vector consisting of the nucleotide sequence of SEQ ID NO: 1 is provided. Here, the recombinant vector may be a plasmid vector, but a pSL1180 vector may be used, but is not limited thereto.
본 발명의 재조합 벡터는 역유전학법으로 재조합 바이러스를 제조하는데 사용될 수 있다. 구체적인 재조합 바이러스의 제조방법은 다음과 같다. 먼저, T7 RNA 중합효소를 제공하기 위하여, Modified Vaccinia Ankara 균주에서 T7 RNA polymerase를 발현하는 바이러스 (MVA/T7 바이러스)를 Hep-2 또는 A549 세포에 감염 시킨다. 이 Hep-2 또는 A549 세포에 NDV의 RNA 중합효소 단백질을 발현하는 3개의 플라스미드(NP, P. L)와 본 발명의 재조합 벡터 pNDV/KU001를 동시에 형질도입(transfection) 한다. Transfection 후 24시간 뒤, chicken embryo fibroblast(CEF) 세포와 동시배양(co-culture)을 수행한다. 48시간 이상 배양 후, 10일된 유정란에 세포 상층액을 주입하여 72시간 배양 후, 요수액을 취득한다.The recombinant vector of the present invention can be used to prepare a recombinant virus by reverse genetics. The method for producing a specific recombinant virus is as follows. First, in order to provide a T7 RNA polymerase, a virus (MVA / T7 virus) expressing T7 RNA polymerase in a Modified Vaccinia Ankara strain is infected with Hep-2 or A549 cells. Three plasmids (NP, P. L) expressing NDV RNA polymerase protein and the recombinant vector pNDV / KU001 of the present invention are simultaneously transfected into the Hep-2 or A549 cells. 24 hours after transfection, co-culture with chicken embryo fibroblast (CEF) cells is performed. After incubation for 48 hours or more, the cell supernatant is injected into a 10-day-old fertilized egg, and after 72 hours of incubation, urine fluid is obtained.
이하에서는, 본 발명의 실시예에서 사용된 실험 재료 및 방법에 대해 상세히 기술한다. 그러나 하기 실시예들은 본 발명의 내용을 예시하는 것일 뿐 발명의 범위가 실시예에 의해 한정되는 것은 아니다.Hereinafter, experimental materials and methods used in the Examples of the present invention will be described in detail. However, the following examples are only illustrative of the contents of the present invention, and the scope of the invention is not limited by the examples.
실시예 1: 재조합 벡터의 구축Example 1: Construction of recombinant vector
본 발명의 재조합 벡터를 구축하기 위해 뉴캐슬병 바이러스 KU001주로부터 TRIzol (Invitrogen, 미국)을 이용하여 RNA를 추출한 다음, Superscript TM II Reverse Transcriptase (Invitrogen, 미국)로 reverse transcription PCR 과정을 수행하여 cDNA를 합성하였다. 이후, 7개의 유전자 절편(절편 1, T7 promoter 부터 뉴클레오타이드 1,755번째 염기서열 까지; 절편 2, 뉴클레오타이드 1번 염기서열부터 3,321번째 서열 까지; 절편 3, 뉴클레오타이드 1,755번째 염기서열부터 6,580번째 서열 까지; 절편 4, 뉴클레오타이드 6,151번째 염기서열부터 10,210번째 서열 까지; 절편 5, 뉴클레오타이드 7,381번째 염기서열부터 11,351번째 서열 까지; 절편 6, 뉴클레오타이드 11,351번째 염기서열 부터 14,995번째 서열 까지; 절편 7, 뉴클레오타이드 14,701번째 염기서열부터 15,186번째 서열 까지)을 PCR 방법으로 얻어낸 뒤, hepatitis delta virus ribozyme, T7 terminator 유전자 서열을 절편 7 유전자에 이어서 삽입하였고, 전체 유전자 서열을 순서대로 pSL1180(Amersham Parmacia Biotech, 영국) 플라스미드에 삽입하여 pNDV/KU001 벡터를 완성하였다. 여기서, pNDV의 p는 plasmid를 의미한다.To construct the recombinant vector of the present invention, RNA was extracted using TRIzol (Invitrogen, USA) from Newcastle disease virus KU001, and then reverse transcription PCR was performed with Superscript TM II Reverse Transcriptase (Invitrogen, USA) to synthesize cDNA. . Subsequently, 7 gene fragments (Section 1, T7 promoter to nucleotide 1,755 nucleotide sequence; fragment 2, nucleotide 1 nucleotide sequence to 3,321 sequence; fragment 3, nucleotide 1,755 nucleotide sequence to 6,580 sequence; fragment 4 , Nucleotides from 6,151 nucleotide sequence to 10,210 sequence; fragment 5, nucleotide 7,381 nucleotide sequence to 11,351 sequence; fragment 6, nucleotide 11,351 nucleotide sequence to 14,995 sequence; fragment 7, nucleotide 14,701 nucleotide sequence to 15,186 After obtaining the second sequence) by PCR method, hepatitis delta virus ribozyme, T7 terminator gene sequence was subsequently inserted into the segment 7 gene, and the entire gene sequence was sequentially inserted into the pSL1180 (Amersham Parmacia Biotech, UK) plasmid to pNDV / KU001 The vector was completed. Here, p of pNDV means plasmid.
실시예 2: 재조합 벡터의 구축 여부 검증Example 2: Validation of the construction of the recombinant vector
상기 실시예 1에서 구축된 pNDV/KU001 벡터를 검증하기 위해 도 4a에 기재된 바와 같이 PCR 기법을 수행하였다. NP-P-M-F 절편과 HN-L 절편을 대조군으로 하였다. 사용된 프라이머는 P1/P2(도 4b), P4/P6(도 4c), P10/P12(도 4d) 이다. 사용된 프라이머 P1(forward 방향; 5'-ACCAAACAGAGAATCCGTGAG-3')은 NDV의 NP 유전자 앞의 염기서열 정보, P2(reverse 방향; 5'-AGATGAGGGGGTTCGTTTGTAG-3')는 NDV의 1701번째 이전 염기서열 정보, P4(forward 방향; 5'-CGCGCCGTCGCAGTGACC-3')는 4292번째, P6(reverse 방향; 5'-CGTTTCCCACCGAACCGC-3')는 7514번째, P10(forward 방향; 5'- ACCGACCCCAACACAGTTCC-3')은 13825번째, P12(reverse 방향; 5'- ACCAAACAAAGATTTGGTG-3')는 NDV의 마지막 염기서열 정보를 토대로 각각 디자인된 것이다. 그 결과, 도 4의 B 내지 D에 나타낸 바와 같이, F 단백질 코딩 염기서열과 HN 단백질 코딩 염기서열이 연결되어 있는 pNDV/KU001 플라스미드가 구축된 것을 확인할 수 있었다.In order to verify the pNDV / KU001 vector constructed in Example 1, a PCR technique was performed as described in FIG. 4A. NP-P-M-F and HN-L sections were used as controls. The primers used were P1 / P2 (Fig. 4b), P4 / P6 (Fig. 4c), and P10 / P12 (Fig. 4d). Primer P1 used (forward direction; 5'-ACCAAACAGAGAATCCGTGAG-3 ') is the sequencing information in front of the NP gene of NDV, P2 (reverse direction; 5'-AGATGAGGGGGTTCGTTTGTAG-3') is the sequencing information prior to 1701 of NDV, P4 (forward direction; 5'-CGCGCCGTCGCAGTGACC-3 ') is 4292th, P6 (reverse direction; 5'-CGTTTCCCACCGAACCGC-3') is 7514th, P10 (forward direction; 5'- ACCGACCCCAACACAGTTCC-3 ') is 13825th , P12 (reverse direction; 5'- ACCAAACAAAGATTTGGTG-3 ') was designed based on the last sequence information of NDV, respectively. As a result, as shown in B to D of FIG. 4, it was confirmed that a pNDV / KU001 plasmid having an F protein coding base sequence and an HN protein coding base sequence linked thereto was constructed.
실시예 3: 재조합 바이러스의 제조 여부 검증Example 3: Verification of the production of recombinant virus
상기 실시예 1에서 구축된 재조합 벡터를 이용하여 재조합 바이러스가 실제로 제조되는지 여부를 확인하였다. 이하에서 rNDV의 r은 recombinant를 나타내는 것으로, rNDV는 재조합 바이러스를 의미한다.It was confirmed whether the recombinant virus was actually produced using the recombinant vector constructed in Example 1 above. Hereinafter, r of rNDV represents recombinant, and rNDV means recombinant virus.
3-1. RT-PCR 기법을 이용한 재조합 rNDV/KU001 바이러스의 제조 여부 검증3-1. Verification of the production of recombinant rNDV / KU001 virus using RT-PCR technique
이하에 설명된 역유전학법으로 rNDV/KU001 바이러스를 제조하였다. 먼저, T7 RNA 중합효소를 제공하기 위하여 Modified Vaccinia Ankara 균주에서 T7 RNA polymerase를 발현하는 바이러스 (MVA/T7 바이러스)를 Hep-2 또는 A549 세포에 감염 시켰다. 상기 실시예 1에서 구축된 pNDV/KU001 벡터 및 NP, P, L 단백질을 발현하는 3개의 플라스미드를 감염된 Hep-2 또는 A549 세포에 형질도입(transfection) 하였다. 48시간 이상 배양 후. chicken embryo fibroblast (CEF) 세포를 첨가하여 2-3일 동안 동시배양(co-culture)하였다. 다음으로, 세포상층액을 수득하여 9-10일령의 닭 유정란 요막강 내에 접종하고, 다시 2-3일 이후 요막강액을 수득하여 hemagglutination assay, hemagglutination-inhibition assay를 수행하여 바이러스 존재를 확인한다. The rNDV / KU001 virus was prepared by the reverse genetics method described below. First, in order to provide a T7 RNA polymerase, a virus (MVA / T7 virus) expressing T7 RNA polymerase in a Modified Vaccinia Ankara strain was infected with Hep-2 or A549 cells. The pNDV / KU001 vector constructed in Example 1 and three plasmids expressing NP, P, and L proteins were transfected into infected Hep-2 or A549 cells. After incubation for more than 48 hours. Chicken embryo fibroblast (CEF) cells were added and co-cultured for 2-3 days. Next, the cell supernatant was obtained and inoculated into the allantoic cavity of 9-10-day-old chicken eggs, and again after 2-3 days, the allantoic fluid was obtained to perform the hemagglutination assay and hemagglutination-inhibition assay to confirm the presence of the virus.
본 발명의 재조합 벡터로부터 실제로 rNDV/KU001 바이러스가 제조되었는지 검증하기 위하여, 바이러스에서 total RNA를 추출한 후 random hexamer를 이용하여 cDNA를 제작하였다. 제작된 cDNA를 주형으로 하여, HN 유전자가 증폭되는 PCR을 수행하고(도 5a), KU001 주에만 존재하는 제한효소 XbaI를 사용하여 대조군 rNDV/Lasota/wt와 비교분석 하였다(도 5b)In order to verify that the rNDV / KU001 virus was actually produced from the recombinant vector of the present invention, total RNA was extracted from the virus and then cDNA was prepared using random hexamer. Using the produced cDNA as a template, PCR was performed to amplify the HN gene (FIG. 5A), and comparative analysis was performed with the control rNDV / Lasota / wt using the restriction enzyme XbaI present only in the KU001 strain (FIG. 5B).
그 결과, 도 5에 나타낸 바와 같이 오직 KU001주의 HN 유전자만 절단되었으며, 이를 통해 제조된 바이러스가 본 발명의 재조합 벡터로부터 유래한 것임을 확인할 수 있었다. As a result, as shown in Figure 5, only the HN gene of the KU001 strain was cut, and it was confirmed that the virus produced therefrom was derived from the recombinant vector of the present invention.
3-2. Genetic tag(NotI)을 이용한 재조합 rNDV/KU001 바이러스의 제조 여부 검증3-2. Verification of the production of recombinant rNDV / KU001 virus using Genetic tag (NotI)
역유전학법으로 제작된 rNDV/KU001 바이러스는 wild type NDV KU001 주에 없는 NotI 제한효소 인식 부위를 가지고 있으므로, 야생형 바이러스와 역유전학법으로 제조된 재조합 바이러스의 구분을 위해 NotI을 유전학적 표지로 이용하였다. The rNDV / KU001 virus produced by the reverse genetics method has a NotI restriction enzyme recognition site that is not found in the wild type NDV KU001 strain, so NotI was used as a genetic marker to distinguish the wild type virus from the recombinant virus produced by the reverse genetics method. .
야생형 바이러스와 rNDV/KU001 바이러스의 RNA를 추출한 후 RT-PCR을 수행하여 NotI 제한효소가 포함된 PCR 유전자 산물을 얻은 다음(도 6a), 유전자 산물에 제한효소 NotI를 처리하였다(도 6b).After extracting the RNA of the wild type virus and rNDV / KU001 virus, RT-PCR was performed to obtain a PCR gene product containing NotI restriction enzyme (FIG. 6A), and the gene product was treated with restriction enzyme NotI (FIG. 6B).
그 결과, 도 6에 나타낸 바와 같이 rNDV/KU001 바이러스의 경우 제한효소NotI를 처리하면 PCR 산물이 절단되는 것이 확인되었다. 이를 통해 역유전학법으로 제조된 rNDV/KU001 바이러스는 wild type NDV KU001 주가 오염된 것이 아니며 본 발명의 재조합 벡터로부터 유래된 새로운 바이러스임을 확인할 수 있었다.As a result, as shown in FIG. 6, it was confirmed that the PCR product was cleaved when the restriction enzyme NotI was treated in the case of the rNDV / KU001 virus. Through this, it was confirmed that the rNDV / KU001 virus produced by the reverse genetics method is not a wild type NDV KU001 strain, but is a new virus derived from the recombinant vector of the present invention.
실시예 4: 재조합 바이러스의 생산성 평가Example 4: Evaluation of productivity of recombinant virus
상기 실시예 3에서 제조된 재조합 NDV KU001 바이러스와 기존 백신주로 사용되는 뉴캐슬병 바이러스 B1주 및 Lasota 주를 준비하여 각각의 바이러스를 100 TCID 50의 역가로 10일령 유정란에 감염시켰다. 바이러스 감염으로부터 12, 24, 48 및 72시간 이후 유정란으로부터 요수를 취득하고, Hemagglutinin assay(HA)로 바이러스 역가를 측정하여 도 7에 나타냈다.The recombinant NDV KU001 virus prepared in Example 3 and the Newcastle disease virus B1 strain and Lasota strain used as existing vaccine strains were prepared, and each virus was infected with 10-day-old fertilized eggs at a titer of 100 TCID 50 . After 12, 24, 48 and 72 hours from viral infection, urine was obtained from the fertilized egg, and the viral titer was measured by Hemagglutinin assay (HA), and the results are shown in FIG. 7.
그 결과, 도 7에 나타낸 바와 같이, 본 발명의 재조합 바이러스의 성장 역가는 Lasota주와 비교하여 약 10 2 배, B1주와 비교하여 약 10 5 배 높은 것을 확인할 수 있었다. 이러한 결과는 본 발명의 재조합 벡터를 이용하여 백신을 대량생산하는 경우 생산 비용을 절감할 수 있음을 시사한다.As a result, it was confirmed that the growth in comparison with the titers of the recombinant virus of the present invention Lasota weeks compared to 10 2 times, about 10 weeks B1 5 times higher as shown in Fig. These results suggest that the production cost can be reduced when the vaccine is mass-produced using the recombinant vector of the present invention.
이상과 같이 실시예들이 비록 한정된 실시예와 도면에 의해 설명되었으나, 해당 기술분야에서 통상의 지식을 가진 자라면 상기의 기재로부터 다양한 수정 및 변형이 가능하다. 예를 들어, 설명된 기술들이 설명된 방법과 다른 순서로 수행되거나, 및/또는 설명된 구성요소들이 설명된 방법과 다른 형태로 결합 또는 조합되거나, 다른 구성요소 또는 균등물에 의하여 대치되거나 치환되더라도 적절한 결과가 달성될 수 있다.As described above, although the embodiments have been described by a limited embodiment and drawings, those skilled in the art can make various modifications and variations from the above description. For example, even if the described techniques are performed in a different order than the described method, and / or the described components are combined or combined in a different form from the described method, or replaced or replaced by another component or equivalent Appropriate results can be achieved.
그러므로, 다른 구현들, 다른 실시예들 및 특허청구범위와 균등한 것들도 후술하는 특허청구범위의 범위에 속한다.Therefore, other implementations, other embodiments, and equivalents to the claims are also within the scope of the following claims.
<110> KOREA UNIVERSITY RESEARCH & BUSINESS FOUNDATION<110> KOREA UNIVERSITY RESEARCH & BUSINESS FOUNDATION
<120> Newcastle disease virus backbone vector using NDV KU001 strain<120> Newcastle disease virus backbone vector using NDV KU001 strain
and method for preparing thereof         and method for preparing thereof
<130> FPC-2019-0157<130> FPC-2019-0157
<150> KR 10-2018-0134494<150> KR 10-2018-0134494
<151> 2018-11-05<151> 2018-11-05
<150> KR 10-2019-0138666<150> KR 10-2019-0138666
<151> 2019-11-01<151> 2019-11-01
<160> 13<160> 13
<170> KoPatentIn 3.0<170> KoPatentIn 3.0
<210> 1<210> 1
<211> 15186<211> 15186
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 1<400> 1
accaaacaga gaatccgtaa ggtacgatag aaggcgaagg agcaatcgaa gtcgtacggg 60accaaacaga gaatccgtaa ggtacgatag aaggcgaagg agcaatcgaa gtcgtacggg 60
tagaaggtgt gaatctcgag tgcgagcccg aagctcaaac tcgagagagc cttctgccaa 120tagaaggtgt gaatctcgag tgcgagcccg aagctcaaac tcgagagagc cttctgccaa 120
aatgtcttct gtattcgatg agtacgagca gctcctcgcg gctcagactc gccccaatgg 180aatgtcttct gtattcgatg agtacgagca gctcctcgcg gctcagactc gccccaatgg 180
agctcatggc ggaggagaga aggggagcac cttaaaggta gaagtcccgg tattcactct 240agctcatggc ggaggagaga aggggagcac cttaaaggta gaagtcccgg tattcactct 240
caacagtgat gacccagaag atagatggaa ctttgcagtg ttttgtcttc ggattgctgt 300caacagtgat gacccagaag atagatggaa ctttgcagtg ttttgtcttc ggattgctgt 300
tagcgaggat gccaacaaac cacttaggca aggtgctctc atatctctct tatgttccca 360tagcgaggat gccaacaaac cacttaggca aggtgctctc atatctctct tatgttccca 360
ctctcaagtg atgaggaacc atgttgccct tgcggggaaa cagaatgagg ccacactggc 420ctctcaagtg atgaggaacc atgttgccct tgcggggaaa cagaatgagg ccacactggc 420
tgttcttgag atcgatggtt ttaccaacgg cgtgccccag ttcaacaaca ggagtggagt 480tgttcttgag atcgatggtt ttaccaacgg cgtgccccag ttcaacaaca ggagtggagt 480
gtctgaagag agagcacaga gatttatgat gatagcaggg tctctccctc gggcatgcag 540gtctgaagag agagcacaga gatttatgat gatagcaggg tctctccctc gggcatgcag 540
caacggtacc ccgttcgtca cagctggggt tgaagatgat gcaccagaag acattactga 600caacggtacc ccgttcgtca cagctggggt tgaagatgat gcaccagaag acattactga 600
taccctggag aggatcctct ctatccaggc tcaagtatgg gtcacggtgg caaaggccat 660taccctggag aggatcctct ctatccaggc tcaagtatgg gtcacggtgg caaaggccat 660
gactgcatat gagacagcag atgagtcaga aacaagaaga atcaataagt acatgcagca 720gactgcatat gagacagcag atgagtcaga aacaagaaga atcaataagt acatgcagca 720
aggcagggtc cagaagaagt acatcctcca ccccgtatgc aggagcgcaa tccaactcac 780aggcagggtc cagaagaagt acatcctcca ccccgtatgc aggagcgcaa tccaactcac 780
aatcagacag tctctggcgg tccgcatctt tttggttagc gagcttaaga gaggccgcaa 840aatcagacag tctctggcgg tccgcatctt tttggttagc gagcttaaga gaggccgcaa 840
cacggcaggt gggacctcca cctattacaa cttggtgggg gatgtagact catacatcag 900cacggcaggt gggacctcca cctattacaa cttggtgggg gatgtagact catacatcag 900
gaacactggg ctaactgcat tcttcctgac acttaaatat ggaattaaca ccaagacatc 960gaacactggg ctaactgcat tcttcctgac acttaaatat ggaattaaca ccaagacatc 960
agcccttgca cttagcagcc tctcaggcga tatccagaaa atgaagcagc tcatgcgctt 1020agcccttgca cttagcagcc tctcaggcga tatccagaaa atgaagcagc tcatgcgctt 1020
gtatcggatg aaaggagata atgcgccgta catgacattg ctcggtgaca gtgaccagat 1080gtatcggatg aaaggagata atgcgccgta catgacattg ctcggtgaca gtgaccagat 1080
gagctttgca cctgccgagt atgcacaact ttactccttt gccatgggta tggcatcagt 1140gagctttgca cctgccgagt atgcacaact ttactccttt gccatgggta tggcatcagt 1140
cctagataaa ggaactagca aataccaatt tgccagggac tttatgagca catcattctg 1200cctagataaa ggaactagca aataccaatt tgccagggac tttatgagca catcattctg 1200
gagacttgga gtagagtacg ctcaggctca aggaagtagc atcaatgagg atatggccgc 1260gagacttgga gtagagtacg ctcaggctca aggaagtagc atcaatgagg atatggccgc 1260
cgagctaaag ctaaccccag cagcaaggag aggcctggca gctgctgccc aaagagtgtc 1320cgagctaaag ctaaccccag cagcaaggag aggcctggca gctgctgccc aaagagtgtc 1320
tgaggagacc agcagcatgg acatgcccac ccaacaagcc ggggtcctca ctggactcag 1380tgaggagacc agcagcatgg acatgcccac ccaacaagcc ggggtcctca ctggactcag 1380
cgacggaggc tcccaagccc cccaaggtgc actgaacaga tcacaagggc aaccggacac 1440cgacggaggc tcccaagccc cccaaggtgc actgaacaga tcacaagggc aaccggacac 1440
cggggatggg gagacccaat ttctggatct gatgagagcg gtggcaaata gcatgagaga 1500cggggatggg gagacccaat ttctggatct gatgagagcg gtggcaaata gcatgagaga 1500
agcgccaaac tctgcgcagg gcacccctca accggggcct cccccaaccc ctgggccctc 1560agcgccaaac tctgcgcagg gcacccctca accggggcct cccccaaccc ctgggccctc 1560
tcaagacaat gacaccgact gggggtactg accgacagca cccagtttgc ttctatgagg 1620tcaagacaat gacaccgact gggggtactg accgacagca cccagtttgc ttctatgagg 1620
tcatcccaat tcctctgccc acaccccacc cctcaatccg caatcccgca tggtcaaacc 1680tcatcccaat tcctctgccc acaccccacc cctcaatccg caatcccgca tggtcaaacc 1680
cacaaacgaa cccccctgtc tccctcctct cccccagccc cacaacccca cctgcccagg 1740cacaaacgaa cccccctgtc tccctcctct cccccagccc cacaacccca cctgcccagg 1740
gcaacatagg tacaatgcga cccactaata atcaatacag ggccaaagaa attagaaaaa 1800gcaacatagg tacaatgcga cccactaata atcaatacag ggccaaagaa attagaaaaa 1800
agtacgggta gaagggagac attcagagat cagggcgagt cacccgggtc tctgctctcc 1860agtacgggta gaagggagac attcagagat cagggcgagt cacccgggtc tctgctctcc 1860
cttctaccta gtggattagg atggagatgg ccacctttac agatgcggag atcgacgagc 1920cttctaccta gtggattagg atggagatgg ccacctttac agatgcggag atcgacgagc 1920
tatttgagac cagtggaact gtcattgaca gcataattac ggcccaggga aaaccagtag 1980tatttgagac cagtggaact gtcattgaca gcataattac ggcccaggga aaaccagtag 1980
agactgttgg aaggagtgca atcccacaag gcaaaactaa ggctttgagc gcagcatggg 2040agactgttgg aaggagtgca atcccacaag gcaaaactaa ggctttgagc gcagcatggg 2040
agaagcatgg gagcatccag tcaccagcca gccaagacac ccctgatcga caggacagat 2100agaagcatgg gagcatccag tcaccagcca gccaagacac ccctgatcga caggacagat 2100
cagataaaca actgtccaca cccgagcaag cgagtccaaa cgacagcccc ccagccacat 2160cagataaaca actgtccaca cccgagcaag cgagtccaaa cgacagcccc ccagccacat 2160
ccactgacca gcctcccact caggctgcag atgaggccgg cgatacacag ctcaagaccg 2220ccactgacca gcctcccact caggctgcag atgaggccgg cgatacacag ctcaagaccg 2220
gagcaagcaa ctctctgctg tcgatgcttg ataaactcag caataagtca tctaatgcta 2280gagcaagcaa ctctctgctg tcgatgcttg ataaactcag caataagtca tctaatgcta 2280
aaaagggccc agggtcgagc cctcaagaaa ggcatcatca acgtctgact caacaacagg 2340aaaagggccc agggtcgagc cctcaagaaa ggcatcatca acgtctgact caacaacagg 2340
ggagtcaaca aagccgcgga aacagccaag agagaccgca gaaccaggcc aaggccatcc 2400ggagtcaaca aagccgcgga aacagccaag agagaccgca gaaccaggcc aaggccatcc 2400
ctggaaacca ggtcacagac gcgaacacag catatcatgg acaatgggag gagtcacaac 2460ctggaaacca ggtcacagac gcgaacacag catatcatgg acaatgggag gagtcacaac 2460
tatcagctgg tgcaacccat catgctctcc gatcagagca gagccaagac aatactcctg 2520tatcagctgg tgcaacccat catgctctcc gatcagagca gagccaagac aatactcctg 2520
cacctgtgga tcatgtccag ctacctgtcg actttgtgca ggcgatgatg tctatgatgg 2580cacctgtgga tcatgtccag ctacctgtcg actttgtgca ggcgatgatg tctatgatgg 2580
aggcgatatc acagagggta agtaaagttg actatcagct ggaccttgtc ttgaaacaga 2640aggcgatatc acagagggta agtaaagttg actatcagct ggaccttgtc ttgaaacaga 2640
catcttctat ccccatgatg cggtctgaaa tccagcagct gaaaacgtct gttgcggtca 2700catcttctat ccccatgatg cggtctgaaa tccagcagct gaaaacgtct gttgcggtca 2700
tggaagccaa tttgggcatg atgaagatcc tggaccctgg ttgtgccaac gtttcatctc 2760tggaagccaa tttgggcatg atgaagatcc tggaccctgg ttgtgccaac gtttcatctc 2760
taagtgatct acgggcagtt gcccgatccc acccggtttt aatttctggc cccggagacc 2820taagtgatct acgggcagtt gcccgatccc acccggtttt aatttctggc cccggagacc 2820
catctcctta tgtgacccaa gggggcgaaa tggcactcaa taaactttcg caaccggtgc 2880catctcctta tgtgacccaa gggggcgaaa tggcactcaa taaactttcg caaccggtgc 2880
aacacccctc tgaattgatt aaacccgcca cggcaagcgg gcctgatata ggagtggaga 2940aacacccctc tgaattgatt aaacccgcca cggcaagcgg gcctgatata ggagtggaga 2940
aagacactgt ccgtgcattg atcatgtcac gccctatgca tccgagctct tcagctaggc 3000aagacactgt ccgtgcattg atcatgtcac gccctatgca tccgagctct tcagctaggc 3000
tcttgagcaa actggacgca gccggatcga ttgaggaaat cagaaaaatc aagcgccttg 3060tcttgagcaa actggacgca gccggatcga ttgaggaaat cagaaaaatc aagcgccttg 3060
cactgaatgg ctaatcacca ccgcaacccg cagcagatcc ctgtccaccc agcaccacac 3120cactgaatgg ctaatcacca ccgcaacccg cagcagatcc ctgtccaccc agcaccacac 3120
ggtatctgca ccaagctcct ctctgcaaac ccaaggtcca acaccccgag cgacaaccct 3180ggtatctgca ccaagctcct ctctgcaaac ccaaggtcca acaccccgag cgacaaccct 3180
gtcctgcttc ctctgcccca ctaaatgatc gcgcagctgc aatcaattca gctatattaa 3240gtcctgcttc ctctgcccca ctaaatgatc gcgcagctgc aatcaattca gctatattaa 3240
ggattaagaa aaaatacggg tagaatcgga gtgccccgat tgtgccaaga tggactcatc 3300ggattaagaa aaaatacggg tagaatcgga gtgccccgat tgtgccaaga tggactcatc 3300
taggacaatc gggctgtact ttgattctac ccttccttct agcaacctgc tagcattccc 3360taggacaatc gggctgtact ttgattctac ccttccttct agcaacctgc tagcattccc 3360
gatagtccta caagacacag gggacgggaa gaagcaaatc gccccgcaat acaggatcca 3420gatagtccta caagacacag gggacgggaa gaagcaaatc gccccgcaat acaggatcca 3420
gcgtcttgac tcgtggacag acagcaaaga agactcggta ttcatcacca cctatggatt 3480gcgtcttgac tcgtggacag acagcaaaga agactcggta ttcatcacca cctatggatt 3480
catctttcag gttgggaatg aagaagccac tgtcggcatg atcaatgata atcccaagcg 3540catctttcag gttgggaatg aagaagccac tgtcggcatg atcaatgata atcccaagcg 3540
cgagttactt tccactgcca tgctatgcct agggagtgta ccaaatgtcg gagatcttgt 3600cgagttactt tccactgcca tgctatgcct agggagtgta ccaaatgtcg gagatcttgt 3600
tgagctggca agggcctgcc tcactatggt ggtaacatgc aagaagagtg caactaacac 3660tgagctggca agggcctgcc tcactatggt ggtaacatgc aagaagagtg caactaacac 3660
cgagagaatg gtcttctcag tagtgcaggc accccaggtg ctgcaaagct gtagggttgt 3720cgagagaatg gtcttctcag tagtgcaggc accccaggtg ctgcaaagct gtagggttgt 3720
ggcaaacaaa tactcgtcgg tgaatgcagt caagcacgtg aaagcaccag agaagattcc 3780ggcaaacaaa tactcgtcgg tgaatgcagt caagcacgtg aaagcaccag agaagattcc 3780
tgggagcgga accctagagt acaaagtgaa ctttgtctct ctgaccgtgg tgccaagaaa 3840tgggagcgga accctagagt acaaagtgaa ctttgtctct ctgaccgtgg tgccaagaaa 3840
ggacgtctac aagataccaa ctgcagcact taaggtctct ggctcaagtc tgtacaatct 3900ggacgtctac aagataccaa ctgcagcact taaggtctct ggctcaagtc tgtacaatct 3900
tgcgctcaat gtcactattg atgtggaggt agacccgaag agcccgttgg tcaaatccct 3960tgcgctcaat gtcactattg atgtggaggt agacccgaag agcccgttgg tcaaatccct 3960
ttccaagtcc gacagtgggt actatgctaa tctcttctta catattgggc ttatgtccac 4020ttccaagtcc gacagtgggt actatgctaa tctcttctta catattgggc ttatgtccac 4020
tgtagataag aaggggaaga aagtgacatt tgacaagctg gaaaggaaga taaggagact 4080tgtagataag aaggggaaga aagtgacatt tgacaagctg gaaaggaaga taaggagact 4080
tgatctatct gtagggctta gtgacgtgct cggaccttcc gtgcttgtaa aggcgagagg 4140tgatctatct gtagggctta gtgacgtgct cggaccttcc gtgcttgtaa aggcgagagg 4140
tgcacggact aagctgctgg cacctttctt ctctagcagt gggacagcct gctatcccat 4200tgcacggact aagctgctgg cacctttctt ctctagcagt gggacagcct gctatcccat 4200
agcaaatgcc tctcctcagg tggccaagat actctggagc caaaccgcgt acctgcggag 4260agcaaatgcc tctcctcagg tggccaagat actctggagc caaaccgcgt acctgcggag 4260
tgtaaaagtc attatccaag cgggcaccca gcgtgctgtc gcagtgaccg ccgaccacga 4320tgtaaaagtc attatccaag cgggcaccca gcgtgctgtc gcagtgaccg ccgaccacga 4320
ggttacctct actaagctgg agaaggggca taccattgcc aaatacaatc ccttcaagaa 4380ggttacctct actaagctgg agaaggggca taccattgcc aaatacaatc ccttcaagaa 4380
ataggctgca tctctgagat tgcactccgc ccatcttccc ggatcaccat gacactaaat 4440ataggctgca tctctgagat tgcactccgc ccatcttccc ggatcaccat gacactaaat 4440
aatgatctgt cttgattact tatagttagt tcgcctgtct atcaaattag aaaaaacacg 4500aatgatctgt cttgattact tatagttagt tcgcctgtct atcaaattag aaaaaacacg 4500
ggtagaagat tctggatccc ggttggcgcc ttcaaggtgc aagatgggct ccagatcttc 4560ggtagaagat tctggatccc ggttggcgcc ttcaaggtgc aagatgggct ccagatcttc 4560
taccaggatc ccagtacctc tcatgctgac cgtccgagtc atgttggcac tgagttgcgt 4620taccaggatc ccagtacctc tcatgctgac cgtccgagtc atgttggcac tgagttgcgt 4620
ctgtccgacc agcgcccttg atggcaggcc tcttgcagct gcagggattg tggtaacggg 4680ctgtccgacc agcgcccttg atggcaggcc tcttgcagct gcagggattg tggtaacggg 4680
agacaaagca gtcaacatat acacctcatc tcagacaggg tcaatcataa tcaagttact 4740agacaaagca gtcaacatat acacctcatc tcagacaggg tcaatcataa tcaagttact 4740
cccaaatatg cccaaggata aagaggcgtg tgcaaaagcc ccgttggagg catacaacag 4800cccaaatatg cccaaggata aagaggcgtg tgcaaaagcc ccgttggagg catacaacag 4800
gacattgact actttgctca ccccccttgg tgattctatc cgtaggatac aagagtctgt 4860gacattgact actttgctca ccccccttgg tgattctatc cgtaggatac aagagtctgt 4860
gaccacgtcc ggaggaggga aacagggacg tcttataggc gccattatcg gtggtgtagc 4920gaccacgtcc ggaggaggga aacagggacg tcttataggc gccattatcg gtggtgtagc 4920
tctcggggtt gcaaccgctg cacagataac agcagcctcg gctctgatac aagccaatca 4980tctcggggtt gcaaccgctg cacagataac agcagcctcg gctctgatac aagccaatca 4980
aaatgctgcc aacatactcc ggctaaaaga gagcattgct gcaaccaatg aggctgtgca 5040aaatgctgcc aacatactcc ggctaaaaga gagcattgct gcaaccaatg aggctgtgca 5040
cgaggtcact aatggattat cacaactagc agtggcagtt gggaagatgc agcaatttgt 5100cgaggtcact aatggattat cacaactagc agtggcagtt gggaagatgc agcaatttgt 5100
taatgaccag tttaataaaa cagctcagga attggactgt ataaaaatta cacagcaggt 5160taatgaccag tttaataaaa cagctcagga attggactgt ataaaaatta cacagcaggt 5160
tggtgtagaa ctcaacctgt acctaactga attgactaca gtattcgggc cacaaatcac 5220tggtgtagaa ctcaacctgt acctaactga attgactaca gtattcgggc cacaaatcac 5220
ttcccctgcc ttaactcagc tgactatcca ggcgctttac aatctagctg gtgggaatat 5280ttcccctgcc ttaactcagc tgactatcca ggcgctttac aatctagctg gtgggaatat 5280
ggattacttg ttgactaagt taggtgtggg gaacaaccaa ctcagctcat taattagtag 5340ggattacttg ttgactaagt taggtgtggg gaacaaccaa ctcagctcat taattagtag 5340
tggcctgatc accggcaacc ctattctgta cgactcacag actcaactct tgggtataca 5400tggcctgatc accggcaacc ctattctgta cgactcacag actcaactct tgggtataca 5400
ggtaacccta ccctcagtcg ggaacctaaa taatatgcgt gccacctacc tggaaacctt 5460ggtaacccta ccctcagtcg ggaacctaaa taatatgcgt gccacctacc tggaaacctt 5460
gtctgtaagt acaaccaaag gatttgcctc agcacttgtc ccaaaagtag tgacacaggt 5520gtctgtaagt acaaccaaag gatttgcctc agcacttgtc ccaaaagtag tgacacaggt 5520
cggttccgtg atagaagagc ttgacacctc gtactgtata gagaccgatt tggatctata 5580cggttccgtg atagaagagc ttgacacctc gtactgtata gagaccgatt tggatctata 5580
ttgtacaaga atagtgacat tccctatgtc tcctggtatt tattcctgtt tgagtggcaa 5640ttgtacaaga atagtgacat tccctatgtc tcctggtatt tattcctgtt tgagtggcaa 5640
tacatctgct tgcatgtact caaagactga aggcgcactc actacgccgt atatgaccct 5700tacatctgct tgcatgtact caaagactga aggcgcactc actacgccgt atatgaccct 5700
caaaggctca gttattgcta actgtaagat gacaacatgt agatgtgcag accccccggg 5760caaaggctca gttattgcta actgtaagat gacaacatgt agatgtgcag accccccggg 5760
tatcatatcg caaaattatg gagaagctgt gtctctaata gataggcaat catgcaatat 5820tatcatatcg caaaattatg gagaagctgt gtctctaata gataggcaat catgcaatat 5820
cttatcctta gacgggataa ctttgaggct cagtggggaa tttgatgcaa cttatcaaaa 5880cttatcctta gacgggataa ctttgaggct cagtggggaa tttgatgcaa cttatcaaaa 5880
gaatatctca atacaagatt ctcaagtaat agtgacaggc aatcttgata tctcgactga 5940gaatatctca atacaagatt ctcaagtaat agtgacaggc aatcttgata tctcgactga 5940
gcttgggaat gtcaacaact cgataagtaa tgctttggat aagttagagg aaagcaacag 6000gcttgggaat gtcaacaact cgataagtaa tgctttggat aagttagagg aaagcaacag 6000
caaactagat aaggtcaatg tcaaactgac cagcacatcc gctcttatta cctatatcgt 6060caaactagat aaggtcaatg tcaaactgac cagcacatcc gctcttatta cctatatcgt 6060
tttaactgtc atatctcttg tatgtggtat acttagcctg gttctagcat gctacctgat 6120tttaactgtc atatctcttg tatgtggtat acttagcctg gttctagcat gctacctgat 6120
gtacaagcaa aaggcgcaac agaagacctt gttgtggctt gggaataata ccctagacca 6180gtacaagcaa aaggcgcaac agaagacctt gttgtggctt gggaataata ccctagacca 6180
gatgagggcc actacaaaaa tgtgaatgcg gatgagaggc agaaacatcc ccaatagcag 6240gatgagggcc actacaaaaa tgtgaatgcg gatgagaggc agaaacatcc ccaatagcag 6240
tttgtgtgta aagtctgaca gcctgttaat tagaagaatt aagaaaaaac taccggatgt 6300tttgtgtgta aagtctgaca gcctgttaat tagaagaatt aagaaaaaac taccggatgt 6300
agatgaccaa agggcgatat acgggtagaa cggtcgggga ggccgtccct caatcgggag 6360agatgaccaa agggcgatat acgggtagaa cggtcgggga ggccgtccct caatcgggag 6360
ccgggcctca caacatccgt tctaccgcat caccaatagc agttttcagt catggaccgc 6420ccgggcctca caacatccgt tctaccgcat caccaatagc agttttcagt catggaccgc 6420
gcagttagcc aagttgcgct ggagaatgat gaaagagagg caaagaatac atggcgcttg 6480gcagttagcc aagttgcgct ggagaatgat gaaagagagg caaagaatac atggcgcttg 6480
gtattccgga tcgcaatcct actctcaacg gtggtgacct tagccatctc tgcagccgcc 6540gtattccgga tcgcaatcct actctcaacg gtggtgacct tagccatctc tgcagccgcc 6540
cttgcatata gcatggaggc cagcacacct agcgatcttg taggcatacc gactgcgatc 6600cttgcatata gcatggaggc cagcacacct agcgatcttg taggcatacc gactgcgatc 6600
tctagagcag aggaaaagat tacatctgca ctcggttcca atcaagatgt agtagatagg 6660tctagagcag aggaaaagat tacatctgca ctcggttcca atcaagatgt agtagatagg 6660
atatataagc aggtggccct cgaatctcca ctggcattgc taaacaccga atctacaatt 6720atatataagc aggtggccct cgaatctcca ctggcattgc taaacaccga atctacaatt 6720
atgaacgcaa taacgtctct ctcttatcga atcaatgggg ccgcaaatag cagcggatgt 6780atgaacgcaa taacgtctct ctcttatcga atcaatgggg ccgcaaatag cagcggatgt 6780
ggagcaccca ttcatgatcc agattatatt ggaggaatag gtaaagaact tattgtagat 6840ggagcaccca ttcatgatcc agattatatt ggaggaatag gtaaagaact tattgtagat 6840
gatgctagcg acgtcacatc atactatccc tctgcgttcc aagaacacct gaactttatc 6900gatgctagcg acgtcacatc atactatccc tctgcgttcc aagaacacct gaactttatc 6900
ccggcgccta ctacaggatc aggttgcact cggataccct catttgacat gagcgctacc 6960ccggcgccta ctacaggatc aggttgcact cggataccct catttgacat gagcgctacc 6960
cactactgtt atactcacaa tgtgatatta tctggctgca gagatcactc gcactcacat 7020cactactgtt atactcacaa tgtgatatta tctggctgca gagatcactc gcactcacat 7020
caatatttag cacttggtgt gcttcggaca tctgcaacag ggagggtatt cttttccact 7080caatatttag cacttggtgt gcttcggaca tctgcaacag ggagggtatt cttttccact 7080
ctgcgttcca tcaatctgga tgacacccaa aatcggaagt cttgcagtgt gagtgcaacc 7140ctgcgttcca tcaatctgga tgacacccaa aatcggaagt cttgcagtgt gagtgcaacc 7140
cccttgggtt gtgatatgct gtgctctaaa gtcacagaga ctgaagaaga ggattataac 7200cccttgggtt gtgatatgct gtgctctaaa gtcacagaga ctgaagaaga ggattataac 7200
tcagctatcc ccacgtcgat ggtacatgga aggttagggt tcgacggcca ataccacgag 7260tcagctatcc ccacgtcgat ggtacatgga aggttagggt tcgacggcca ataccacgag 7260
aaggacctag atgtcacaac actattcgag gactgggtgg caaactaccc aggagtaggg 7320aaggacctag atgtcacaac actattcgag gactgggtgg caaactaccc aggagtaggg 7320
ggcgggtctt ttattgacaa ccgcgtatgg ttcccagttt acggagggct aaaacccaat 7380ggcgggtctt ttattgacaa ccgcgtatgg ttcccagttt acggagggct aaaacccaat 7380
tcgcccagtg acaccgcaca agaagggaaa tatgtaatat acaagcgata caatgacaca 7440tcgcccagtg acaccgcaca agaagggaaa tatgtaatat acaagcgata caatgacaca 7440
tgtccagatg agcaagatta tcagattcaa atggctaagt cttcatataa gcctgggcgg 7500tgtccagatg agcaagatta tcagattcaa atggctaagt cttcatataa gcctgggcgg 7500
tttggaggga aacgcgtaca gcaggccatc ttatctatca aagtgtcaac atccttgggc 7560tttggaggga aacgcgtaca gcaggccatc ttatctatca aagtgtcaac atccttgggc 7560
gaggacccgg tactgactgt accgcccaac acagtaacac tcatgggggc cgaaggcaga 7620gaggacccgg tactgactgt accgcccaac acagtaacac tcatgggggc cgaaggcaga 7620
gttctcacag tagggacatc tcatttcctt tatcagcgag ggtcatcata cttctcccct 7680gttctcacag tagggacatc tcatttcctt tatcagcgag ggtcatcata cttctcccct 7680
gccctactat atcctatgat agtcagcaac aaaacagcca ctcttcatag tccttataca 7740gccctactat atcctatgat agtcagcaac aaaacagcca ctcttcatag tccttataca 7740
ttcaatgcct tcactcgacc aggtagtgtc ccttgccagg cttcagcaag atgccctaac 7800ttcaatgcct tcactcgacc aggtagtgtc ccttgccagg cttcagcaag atgccctaac 7800
tcatgtgtta ccggagtcta tactgatcca tatcccttgg tcttctatag gaaccacacc 7860tcatgtgtta ccggagtcta tactgatcca tatcccttgg tcttctatag gaaccacacc 7860
ttgcgagggg tattcgggac gatgcttgat gataaacaag caagactcaa ccctgtatct 7920ttgcgagggg tattcgggac gatgcttgat gataaacaag caagactcaa ccctgtatct 7920
gcagtatttg acagcatatc ccgcagtcgc ataacccggg tgagttcaag cagcaccaag 7980gcagtatttg acagcatatc ccgcagtcgc ataacccggg tgagttcaag cagcaccaag 7980
gcagcataca caacatcaac atgttttaaa gttgtaaaga ccaataaaac ctattgtctc 8040gcagcataca caacatcaac atgttttaaa gttgtaaaga ccaataaaac ctattgtctc 8040
agcattgccg aaatatccaa taccctcttc ggggaattca gaatcgtccc tttactagtt 8100agcattgccg aaatatccaa taccctcttc ggggaattca gaatcgtccc tttactagtt 8100
gagattctca aggatgatgg ggttagagaa gccaggtcta gccggttgag tcaactgcga 8160gagattctca aggatgatgg ggttagagaa gccaggtcta gccggttgag tcaactgcga 8160
gagggttgga aagatgacat tgtatcacct atcttttgcg acgccaagaa tcaaactgaa 8220gagggttgga aagatgacat tgtatcacct atcttttgcg acgccaagaa tcaaactgaa 8220
taccggcgcg agctcgagtc ctacgctgcc agttggccat aatcagctag tgctaatgtg 8280taccggcgcg agctcgagtc ctacgctgcc agttggccat aatcagctag tgctaatgtg 8280
attagattaa gtcttgtcgg tagtcacttg attaagaaaa aatgtgggtg gtagcgggat 8340attagattaa gtcttgtcgg tagtcacttg attaagaaaa aatgtgggtg gtagcgggat 8340
ataaggcaaa acaactcaag gaggatagca cgggtaggac atggcgagct ccggtcccga 8400ataaggcaaa acaactcaag gaggatagca cgggtaggac atggcgagct ccggtcccga 8400
gagggcggag catcagatta tcctaccaga gtcacacctg tcttcaccat tagtcaagca 8460gagggcggag catcagatta tcctaccaga gtcacacctg tcttcaccat tagtcaagca 8460
caaactactc tattactgga aattaactgg gctaccactc cctgacgagt gtgacttcga 8520caaactactc tattactgga aattaactgg gctaccactc cctgacgagt gtgacttcga 8520
ccacctcatt ctcagccgac aatggaagaa aatacttgaa tcggcctccc ctgacactga 8580ccacctcatt ctcagccgac aatggaagaa aatacttgaa tcggcctccc ctgacactga 8580
gagaatgata aaacttggaa gggcagtgca ccagactctc aaccacaatt ccaagataac 8640gagaatgata aaacttggaa gggcagtgca ccagactctc aaccacaatt ccaagataac 8640
cggagtactc catcccaggt gtttagaaga attggctagt attgaggttc ctgactcaac 8700cggagtactc catcccaggt gtttagaaga attggctagt attgaggttc ctgactcaac 8700
caacaagttt cggaagatcg agaagaaaat ccaaattcac aacacaaggt atggagaact 8760caacaagttt cggaagatcg agaagaaaat ccaaattcac aacacaaggt atggagaact 8760
gttcacaaga ctgtgcacgc atgtagagaa gaaattgttg ggatcatctt ggtctaataa 8820gttcacaaga ctgtgcacgc atgtagagaa gaaattgttg ggatcatctt ggtctaataa 8820
tgtcccccgg tcagaagagt tcaacagcat ccgtacagat ccggcattct ggtttcactc 8880tgtcccccgg tcagaagagt tcaacagcat ccgtacagat ccggcattct ggtttcactc 8880
aaaatggtcc acaactaagt ttgcatggct ccatataaaa cagattcaaa ggcatctgat 8940aaaatggtcc acaactaagt ttgcatggct ccatataaaa cagattcaaa ggcatctgat 8940
tgtggcagca agaacaaggt ccgcagccaa caaattggtg acgctgaccc ataaggtagg 9000tgtggcagca agaacaaggt ccgcagccaa caaattggtg acgctgaccc ataaggtagg 9000
ccaagtcttt gttactcctg agcttgtcat tgtgacacat acagatgaga acaagttcac 9060ccaagtcttt gttactcctg agcttgtcat tgtgacacat acagatgaga acaagttcac 9060
gtgtcttacc caggaacttg tgttgatgta tgcagatatg atggagggca gagatatggt 9120gtgtcttacc caggaacttg tgttgatgta tgcagatatg atggagggca gagatatggt 9120
caacataata tcatccacgg cggcacatct caggagccta tcagagaaaa ttgatgacat 9180caacataata tcatccacgg cggcacatct caggagccta tcagagaaaa ttgatgacat 9180
tctgcggtta gtagatgccc tggcaaaaga tctgggtaat caagtctacg atgttgtagc 9240tctgcggtta gtagatgccc tggcaaaaga tctgggtaat caagtctacg atgttgtagc 9240
actcatggag ggatttgcat acggcgccgt ccagctgctt gagccgtcag gtacattcgc 9300actcatggag ggatttgcat acggcgccgt ccagctgctt gagccgtcag gtacattcgc 9300
aggggatttc ttcgcattca acctgcagga gctcaaagac actttgatcg gcctccttcc 9360aggggatttc ttcgcattca acctgcagga gctcaaagac actttgatcg gcctccttcc 9360
taaggatata gcagaatctg tgactcacgc aatagccact gtattctctg gcttagaaca 9420taaggatata gcagaatctg tgactcacgc aatagccact gtattctctg gcttagaaca 9420
aaatcaagcg gctgagatgc tgtgcctgtt gcgtctatgg ggccacccat tacttgagtc 9480aaatcaagcg gctgagatgc tgtgcctgtt gcgtctatgg ggccacccat tacttgagtc 9480
ccgtattgcg gcaaaagcag taaggagcca aatgtgcgca ccaaaaatgg tagactttga 9540ccgtattgcg gcaaaagcag taaggagcca aatgtgcgca ccaaaaatgg tagactttga 9540
tatgatcctc caggtattgt ctttctttaa aggaacaatc atcaacggat acagaaagaa 9600tatgatcctc caggtattgt ctttctttaa aggaacaatc atcaacggat acagaaagaa 9600
gaatgcaggt gtttggccac gtgtcaaagt agaaacgata tacgggaagg tcattgggca 9660gaatgcaggt gtttggccac gtgtcaaagt agaaacgata tacgggaagg tcattgggca 9660
gctacacgct gattcagcgg agatttcaca cgatatcatg ttgagagagt acaagagttt 9720gctacacgct gattcagcgg agatttcaca cgatatcatg ttgagagagt acaagagttt 9720
atctgcgctt gaattcgagc catgtataga atacgaccct atcaccaatc tgagcatgtt 9780atctgcgctt gaattcgagc catgtataga atacgaccct atcaccaatc tgagcatgtt 9780
tctaaaagac aaggcgatcg cacacccgaa agacaactgg ctcgccgcgt ttaggcgaaa 9840tctaaaagac aaggcgatcg cacacccgaa agacaactgg ctcgccgcgt ttaggcgaaa 9840
ccttctctct gaggaccaga agaaacatgt aaaggaggca acctctacta accgtctctt 9900ccttctctct gaggaccaga agaaacatgt aaaggaggca acctctacta accgtctctt 9900
gatagagttc ttagagtcaa atgattttga tccatataag gagatggaat atctgacgac 9960gatagagttc ttagagtcaa atgattttga tccatataag gagatggaat atctgacgac 9960
ccttgagtac ctaagagatg acaatgtggc agtatcatac tcgctcaagg agaaggaagt 10020ccttgagtac ctaagagatg acaatgtggc agtatcatac tcgctcaagg agaaggaagt 10020
gaaggttaat gggcggattt ttgctaagct aacaaagaaa ttaaggaact gtcaagtgat 10080gaaggttaat gggcggattt ttgctaagct aacaaagaaa ttaaggaact gtcaagtgat 10080
ggcggaaggg atcttagctg accagattgc acctttcttt caagggaatg gggtcattca 10140ggcggaaggg atcttagctg accagattgc acctttcttt caagggaatg gggtcattca 10140
ggatagcata tctttaacca agagtatgct agcgatgagt caattgtctt tcaacagcaa 10200ggatagcata tctttaacca agagtatgct agcgatgagt caattgtctt tcaacagcaa 10200
taagaaacgt atcactgact gcaaagaaag agtagcctca aaccgcaatc acgatcaaaa 10260taagaaacgt atcactgact gcaaagaaag agtagcctca aaccgcaatc acgatcaaaa 10260
gagcaagaat cgtcggagag ttgccacttt tataacgact gacctgcaaa agtactgtct 10320gagcaagaat cgtcggagag ttgccacttt tataacgact gacctgcaaa agtactgtct 10320
taattggaga tatcagacaa tcaaactgtt cgctcatgcc atcaatcagc tgatgggctt 10380taattggaga tatcagacaa tcaaactgtt cgctcatgcc atcaatcagc tgatgggctt 10380
acctcacttc ttcgaatgga ttcatctaag actaatggat actacgatgt ttgtaggaga 10440acctcacttc ttcgaatgga ttcatctaag actaatggat actacgatgt ttgtaggaga 10440
ccctttcaat cccccaagtg acccaactga ctgtgatctc tcaagagtcc caaatgatga 10500ccctttcaat cccccaagtg acccaactga ctgtgatctc tcaagagtcc caaatgatga 10500
catatatatt gtcagtgcta gagggggtat tgagggatta tgtcagaagc tatggacaat 10560catatatatt gtcagtgcta gagggggtat tgagggatta tgtcagaagc tatggacaat 10560
gatctcaatt gctgcaatcc aacttgctgc agcaagatca cattgtcgcg tcgcctgtat 10620gatctcaatt gctgcaatcc aacttgctgc agcaagatca cattgtcgcg tcgcctgtat 10620
ggtacagggt gacaatcaag taatagctgt aacgagagag gtaaggtcag atgactcccc 10680ggtacagggt gacaatcaag taatagctgt aacgagagag gtaaggtcag atgactcccc 10680
ggaaatggtg ttaacacaat tgcatcaagc cagtgataat ttcttcaagg aattgattca 10740ggaaatggtg ttaacacaat tgcatcaagc cagtgataat ttcttcaagg aattgattca 10740
tgttaatcat ttgattggcc ataatttgaa ggatcgtgaa acaatcagat cagacacatt 10800tgttaatcat ttgattggcc ataatttgaa ggatcgtgaa acaatcagat cagacacatt 10800
cttcatatac agcaaacgaa tattcaaaga tggagcaata ctcagtcaag tcctcaaaaa 10860cttcatatac agcaaacgaa tattcaaaga tggagcaata ctcagtcaag tcctcaaaaa 10860
ttcatctaaa ttagtgctaa tatcaggcga ccttagtgaa aacaccgtaa tgtcctgtgc 10920ttcatctaaa ttagtgctaa tatcaggcga ccttagtgaa aacaccgtaa tgtcctgtgc 10920
caacattgca tctactatag cacggctgtg cgagaacggg cttccaaagg atttctgtta 10980caacattgca tctactatag cacggctgtg cgagaacggg cttccaaagg atttctgtta 10980
ttacttaaac tacctgatga gttgcgtgca gacatacttt gattctgagt tttccatcac 11040ttacttaaac tacctgatga gttgcgtgca gacatacttt gattctgagt tttccatcac 11040
taacagctcg caccccgatt ctaaccagtc gtggattgaa gacatctctt ttgtgcactc 11100taacagctcg caccccgatt ctaaccagtc gtggattgaa gacatctctt ttgtgcactc 11100
atatgtcctg acccctgccc agctaggggg actgagcaac ctccaatact caaggctcta 11160atatgtcctg acccctgccc agctaggggg actgagcaac ctccaatact caaggctcta 11160
cacgaggaac atcggtgacc cgggaactac tgcttttgca gagatcaagc gattagaagc 11220cacgaggaac atcggtgacc cgggaactac tgcttttgca gagatcaagc gattagaagc 11220
agtggggtta ctaagttcta gtattatgac taacatctta actaggccgc ctggaaatgg 11280agtggggtta ctaagttcta gtattatgac taacatctta actaggccgc ctggaaatgg 11280
agattgggcc agtctgtgta acgaccctta ctctttcaat tttgagactg tcgcgagtcc 11340agattgggcc agtctgtgta acgaccctta ctctttcaat tttgagactg tcgcgagtcc 11340
aaatattgtc cttaagaaac atacacaaag agtcctattt gaaacttgtt caaatccctt 11400aaatattgtc cttaagaaac atacacaaag agtcctattt gaaacttgtt caaatccctt 11400
attatctggc gtgcatacag aggataatga ggcagaagag aaggcgttgg ctgaattttt 11460attatctggc gtgcatacag aggataatga ggcagaagag aaggcgttgg ctgaattttt 11460
actcaatcaa gaagtaattc atccacgtgt cgcacatgct atcatggaag caagctctat 11520actcaatcaa gaagtaattc atccacgtgt cgcacatgct atcatggaag caagctctat 11520
aggtaggagg aagcagattc aagggcttgt tgacacaaca aacaccgtaa tcaagattgc 11580aggtaggagg aagcagattc aagggcttgt tgacacaaca aacaccgtaa tcaagattgc 11580
attgactagg aggccacttg gcatcaagag gctgatgcgg atagttaact actcgagcat 11640attgactagg aggccacttg gcatcaagag gctgatgcgg atagttaact actcgagcat 11640
gcatgcaatg ctgtttagag acgatgtttt ctcatctaac aggtctaacc accccttagt 11700gcatgcaatg ctgtttagag acgatgtttt ctcatctaac aggtctaacc accccttagt 11700
ttcctctaat atgtgttctc tgacgctagc agactatgca cggaatagaa gctggtcacc 11760ttcctctaat atgtgttctc tgacgctagc agactatgca cggaatagaa gctggtcacc 11760
attgacgggg ggtagaaaga tactgggtgt atctaatcct gatactatag aacttgtaga 11820attgacgggg ggtagaaaga tactgggtgt atctaatcct gatactatag aacttgtaga 11820
gggtgagatc cttagcgtca gcggaggatg cacaagatgt gacagcggag atgaacaatt 11880gggtgagatc cttagcgtca gcggaggatg cacaagatgt gacagcggag atgaacaatt 11880
cacttggttc catcttccga gcaatataga actgaccgat gacaccagca agaatcctcc 11940cacttggttc catcttccga gcaatataga actgaccgat gacaccagca agaatcctcc 11940
gatgagagtg ccgtacctcg ggtcaaagac tcaagagagg agggccgcct cgcttgcgaa 12000gatgagagtg ccgtacctcg ggtcaaagac tcaagagagg agggccgcct cgcttgcgaa 12000
aatagctcat atgtcaccac atgtgaaagc tgctctaagg gcatcatccg tgttgatctg 12060aatagctcat atgtcaccac atgtgaaagc tgctctaagg gcatcatccg tgttgatctg 12060
ggcttatgga gacaacgaag taaattggac tgctgctctt aaaattgcaa gatctcggtg 12120ggcttatgga gacaacgaag taaattggac tgctgctctt aaaattgcaa gatctcggtg 12120
caatataaac tcagagtatc ttcgactatt gtccccctta cccacagctg ggaatctcca 12180caatataaac tcagagtatc ttcgactatt gtccccctta cccacagctg ggaatctcca 12180
acatagactg gatgacggca taactcagat gacattcacc cctgcatctc tctacagggt 12240acatagactg gatgacggca taactcagat gacattcacc cctgcatctc tctacagggt 12240
gtcaccttat attcacatat ccaatgattc tcaaaggtta ttcacggaag aaggagtcaa 12300gtcaccttat attcacatat ccaatgattc tcaaaggtta ttcacggaag aaggagtcaa 12300
agagggaaat gtagtttatc agcaaatcat gctcttgggt ttatctctaa tcgaatcact 12360agagggaaat gtagtttatc agcaaatcat gctcttgggt ttatctctaa tcgaatcact 12360
cttcccgatg acgacaacca ggacatacga tgagatcaca ttgcacctcc acagtaaatt 12420cttcccgatg acgacaacca ggacatacga tgagatcaca ttgcacctcc acagtaaatt 12420
tagctgctgt atcagggaag caccggttgc agttcctttc gagttactcg ggatggcacc 12480tagctgctgt atcagggaag caccggttgc agttcctttc gagttactcg ggatggcacc 12480
agaactaagg acagtgacct caaataagtt tatgtatgat cctagtcctg tatcggaggg 12540agaactaagg acagtgacct caaataagtt tatgtatgat cctagtcctg tatcggaggg 12540
tgactttgcg agacttgact tagctatctt taagagttat gagcttaatc tagaatcata 12600tgactttgcg agacttgact tagctatctt taagagttat gagcttaatc tagaatcata 12600
tcccacaata gagctaatga acattctttc aatatccagc gggaagttaa tcggccagtc 12660tcccacaata gagctaatga acattctttc aatatccagc gggaagttaa tcggccagtc 12660
tgtggtttct tatgatgaag atacctccat aaagaatgac gccataatag tgtatgacaa 12720tgtggtttct tatgatgaag atacctccat aaagaatgac gccataatag tgtatgacaa 12720
cacccggaat tggatcagcg aagctcagaa ttcagatgtg gtccgcctat tcgagtatgc 12780cacccggaat tggatcagcg aagctcagaa ttcagatgtg gtccgcctat tcgagtatgc 12780
agcacttgaa gtgcttctcg actgttctta tcagctctac tatctgagag taagaggcct 12840agcacttgaa gtgcttctcg actgttctta tcagctctac tatctgagag taagaggcct 12840
agacaatatc gtgttgtata tgagtgactt atataagaat atgccaggaa ttctactttc 12900agacaatatc gtgttgtata tgagtgactt atataagaat atgccaggaa ttctactttc 12900
caacattgca gctacaatat ctcatcccat cattcattca agattgcatg cagtaggcct 12960caacattgca gctacaatat ctcatcccat cattcattca agattgcatg cagtaggcct 12960
ggtcaatcac gacgggtcac accaacttgc agacacagat ttcatcgaaa tgtctgcaaa 13020ggtcaatcac gacgggtcac accaacttgc agacacagat ttcatcgaaa tgtctgcaaa 13020
actattagtc tcttgcactc gacgcgtggt ctcaggttta tatgcaggga ataagtatga 13080actattagtc tcttgcactc gacgcgtggt ctcaggttta tatgcaggga ataagtatga 13080
tctgctgttc ccgtctgtct tagatgataa cctgagtgag aagatgcttc agctgatatc 13140tctgctgttc ccgtctgtct tagatgataa cctgagtgag aagatgcttc agctgatatc 13140
tcggttatgc tgcctgtata cggtgctctt tgctacaaca agagagatcc cgaaaataag 13200tcggttatgc tgcctgtata cggtgctctt tgctacaaca agagagatcc cgaaaataag 13200
aggcttatct gcagaagaga agtgttcagt acttactgag tacctactgt cagatgctgt 13260aggcttatct gcagaagaga agtgttcagt acttactgag tacctactgt cagatgctgt 13260
gaaaccatta cttagttctg agcaagtgag ctctatcatg tctcctaaca tagttacgtt 13320gaaaccatta cttagttctg agcaagtgag ctctatcatg tctcctaaca tagttacgtt 13320
cccagctaat ctatattaca tgtctcggaa gagccttaat ttgattaggg aaagagagga 13380cccagctaat ctatattaca tgtctcggaa gagccttaat ttgattaggg aaagagagga 13380
cagggacact atcttggcat tgttgttccc ccaagagcca ctacttgagt tccccttagt 13440cagggacact atcttggcat tgttgttccc ccaagagcca ctacttgagt tccccttagt 13440
acaagatatt ggcgctcgag tgaaagatcc attcacccga caacctgcgg cgtttttaca 13500acaagatatt ggcgctcgag tgaaagatcc attcacccga caacctgcgg cgtttttaca 13500
agaattagat ttgagcgctc cagcaaggta tgacgcattt acacttagtc aggttcattc 13560agaattagat ttgagcgctc cagcaaggta tgacgcattt acacttagtc aggttcattc 13560
tgaacacaca tcaccaaatc cggaggacga ctacttagta cgatacctgt tcagaggaat 13620tgaacacaca tcaccaaatc cggaggacga ctacttagta cgatacctgt tcagaggaat 13620
agggaccgcg tcctcctctt ggtataaggc atctcacctt ctttctgtac ctgaggtcag 13680agggaccgcg tcctcctctt ggtataaggc atctcacctt ctttctgtac ctgaggtcag 13680
atgtgcaagg cacgggaatt ccttatactt ggcagaagga agcggagcca ttatgagtct 13740atgtgcaagg cacgggaatt ccttatactt ggcagaagga agcggagcca ttatgagtct 13740
tctcgaactg catgtgccgc atgagactat ctattacaat acgctcttct caaacgagat 13800tctcgaactg catgtgccgc atgagactat ctattacaat acgctcttct caaacgagat 13800
gaacccccca cagcggcatt tcggaccgac cccaacacag tttctgaatt cagttgttta 13860gaacccccca cagcggcatt tcggaccgac cccaacacag tttctgaatt cagttgttta 13860
taggaatcta caggcggagg taccatgtaa ggatggattt gtccaggagt tccgtccatt 13920taggaatcta caggcggagg taccatgtaa ggatggattt gtccaggagt tccgtccatt 13920
atggagagag aatacagaag aaagcgatct gacctcagat aaagcagtgg gttacatcac 13980atggagagag aatacagaag aaagcgatct gacctcagat aaagcagtgg gttacatcac 13980
atctgcagtg ccctaccggt ctgtatcatt gctgcactgt gacattgaga ttcctccagg 14040atctgcagtg ccctaccggt ctgtatcatt gctgcactgt gacattgaga ttcctccagg 14040
atccaatcaa agcttactgg atcaactggc taccaatcta tctctgattg ccatgcattc 14100atccaatcaa agcttactgg atcaactggc taccaatcta tctctgattg ccatgcattc 14100
tgtaagggag ggcggggtcg tgatcatcaa agtgttgtat gcaatgggat attacttcca 14160tgtaagggag ggcggggtcg tgatcatcaa agtgttgtat gcaatgggat attacttcca 14160
tctactcatg aacttgttca ctccgtgttc tacgaaagga tatattctct ctaatggcta 14220tctactcatg aacttgttca ctccgtgttc tacgaaagga tatattctct ctaatggcta 14220
tgcatgtaga ggggatatgg agtgttacct ggtatttgtc atgggctatc gaggtgggcc 14280tgcatgtaga ggggatatgg agtgttacct ggtatttgtc atgggctatc gaggtgggcc 14280
tacatttgta catgaggtag tgaggatggc aaaaactcta gtgcagcggc acggtacact 14340tacatttgta catgaggtag tgaggatggc aaaaactcta gtgcagcggc acggtacact 14340
tttgtccaaa tcagatgaga tcacactgac taggttattt acctcacagc ggcagcgtgt 14400tttgtccaaa tcagatgaga tcacactgac taggttattt acctcacagc ggcagcgtgt 14400
aacagacatc ctatccagtc ctttaccgag actaataaag ttcttgagaa agaatatcga 14460aacagacatc ctatccagtc ctttaccgag actaataaag ttcttgagaa agaatatcga 14460
tactgcgcta attgaagccg ggggacaacc cgtccgtcca ttctgtgcag agagcttggt 14520tactgcgcta attgaagccg ggggacaacc cgtccgtcca ttctgtgcag agagcttggt 14520
gaggacacta gcggacacaa ctcagatgac ccagatcatc gctagtcaca ttgacacagt 14580gaggacacta gcggacacaa ctcagatgac ccagatcatc gctagtcaca ttgacacagt 14580
cattcgatct gtgatctaca tggaggctga gggtgatctc gccgacacag tgttcttatt 14640cattcgatct gtgatctaca tggaggctga gggtgatctc gccgacacag tgttcttatt 14640
taccccctac aatctctcta cagacggtaa aaagagaaca tcacttaaac agtgcacaag 14700taccccctac aatctctcta cagacggtaa aaagagaaca tcacttaaac agtgcacaag 14700
gcagatctta gaggtcacaa tattgggtct tagagttgaa aatctcaata aagtaggtga 14760gcagatctta gaggtcacaa tattgggtct tagagttgaa aatctcaata aagtaggtga 14760
tgtagtcagt ctagtactta aaggtatgat ttctctggag gacctgatcc ctctaagaac 14820tgtagtcagt ctagtactta aaggtatgat ttctctggag gacctgatcc ctctaagaac 14820
atacttgaag cgtagtacct gccctaagta tttgaagtct gttctaggta ttactaaact 14880atacttgaag cgtagtacct gccctaagta tttgaagtct gttctaggta ttactaaact 14880
caaagaaatg tttacagaca cctctttatt atacttgact cgtgctcaac aaaaattcta 14940caaagaaatg tttacagaca cctctttatt atacttgact cgtgctcaac aaaaattcta 14940
catgaaaact ataggcaacg cagtcaaggg atactacagt aactgtgact cttaaaaata 15000catgaaaact ataggcaacg cagtcaaggg atactacagt aactgtgact cttaaaaata 15000
atcacatatt aataggctcc ttttctagtt aactgagccc ttgttgattt aatgatacta 15060atcacatatt aataggctcc ttttctagtt aactgagccc ttgttgattt aatgatacta 15060
tattagaaaa aagttgcact ccgatccttt aggactcgtg ttcgaattca aataattgtc 15120tattagaaaa aagttgcact ccgatccttt aggactcgtg ttcgaattca aataattgtc 15120
ttagaaaaaa gttgcgcgta attgttcttg aatgtagtcc tgtcattcac caaatctttg 15180ttagaaaaaa gttgcgcgta attgttcttg aatgtagtcc tgtcattcac caaatctttg 15180
tttggt 15186tttggt 15186
<210> 2<210> 2
<211> 1470<211> 1470
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 2<400> 2
atgtcttctg tattcgatga gtacgagcag ctcctcgcgg ctcagactcg ccccaatgga 60atgtcttctg tattcgatga gtacgagcag ctcctcgcgg ctcagactcg ccccaatgga 60
gctcatggcg gaggagagaa ggggagcacc ttaaaggtag aagtcccggt attcactctc 120gctcatggcg gaggagagaa ggggagcacc ttaaaggtag aagtcccggt attcactctc 120
aacagtgatg acccagaaga tagatggaac tttgcagtgt tttgtcttcg gattgctgtt 180aacagtgatg acccagaaga tagatggaac tttgcagtgt tttgtcttcg gattgctgtt 180
agcgaggatg ccaacaaacc acttaggcaa ggtgctctca tatctctctt atgttcccac 240agcgaggatg ccaacaaacc acttaggcaa ggtgctctca tatctctctt atgttcccac 240
tctcaagtga tgaggaacca tgttgccctt gcggggaaac agaatgaggc cacactggct 300tctcaagtga tgaggaacca tgttgccctt gcggggaaac agaatgaggc cacactggct 300
gttcttgaga tcgatggttt taccaacggc gtgccccagt tcaacaacag gagtggagtg 360gttcttgaga tcgatggttt taccaacggc gtgccccagt tcaacaacag gagtggagtg 360
tctgaagaga gagcacagag atttatgatg atagcagggt ctctccctcg ggcatgcagc 420tctgaagaga gagcacagag atttatgatg atagcagggt ctctccctcg ggcatgcagc 420
aacggtaccc cgttcgtcac agctggggtt gaagatgatg caccagaaga cattactgat 480aacggtaccc cgttcgtcac agctggggtt gaagatgatg caccagaaga cattactgat 480
accctggaga ggatcctctc tatccaggct caagtatggg tcacggtggc aaaggccatg 540accctggaga ggatcctctc tatccaggct caagtatggg tcacggtggc aaaggccatg 540
actgcatatg agacagcaga tgagtcagaa acaagaagaa tcaataagta catgcagcaa 600actgcatatg agacagcaga tgagtcagaa acaagaagaa tcaataagta catgcagcaa 600
ggcagggtcc agaagaagta catcctccac cccgtatgca ggagcgcaat ccaactcaca 660ggcagggtcc agaagaagta catcctccac cccgtatgca ggagcgcaat ccaactcaca 660
atcagacagt ctctggcggt ccgcatcttt ttggttagcg agcttaagag aggccgcaac 720atcagacagt ctctggcggt ccgcatcttt ttggttagcg agcttaagag aggccgcaac 720
acggcaggtg ggacctccac ctattacaac ttggtggggg atgtagactc atacatcagg 780acggcaggtg ggacctccac ctattacaac ttggtggggg atgtagactc atacatcagg 780
aacactgggc taactgcatt cttcctgaca cttaaatatg gaattaacac caagacatca 840aacactgggc taactgcatt cttcctgaca cttaaatatg gaattaacac caagacatca 840
gcccttgcac ttagcagcct ctcaggcgat atccagaaaa tgaagcagct catgcgcttg 900gcccttgcac ttagcagcct ctcaggcgat atccagaaaa tgaagcagct catgcgcttg 900
tatcggatga aaggagataa tgcgccgtac atgacattgc tcggtgacag tgaccagatg 960tatcggatga aaggagataa tgcgccgtac atgacattgc tcggtgacag tgaccagatg 960
agctttgcac ctgccgagta tgcacaactt tactcctttg ccatgggtat ggcatcagtc 1020agctttgcac ctgccgagta tgcacaactt tactcctttg ccatgggtat ggcatcagtc 1020
ctagataaag gaactagcaa ataccaattt gccagggact ttatgagcac atcattctgg 1080ctagataaag gaactagcaa ataccaattt gccagggact ttatgagcac atcattctgg 1080
agacttggag tagagtacgc tcaggctcaa ggaagtagca tcaatgagga tatggccgcc 1140agacttggag tagagtacgc tcaggctcaa ggaagtagca tcaatgagga tatggccgcc 1140
gagctaaagc taaccccagc agcaaggaga ggcctggcag ctgctgccca aagagtgtct 1200gagctaaagc taaccccagc agcaaggaga ggcctggcag ctgctgccca aagagtgtct 1200
gaggagacca gcagcatgga catgcccacc caacaagccg gggtcctcac tggactcagc 1260gaggagacca gcagcatgga catgcccacc caacaagccg gggtcctcac tggactcagc 1260
gacggaggct cccaagcccc ccaaggtgca ctgaacagat cacaagggca accggacacc 1320gacggaggct cccaagcccc ccaaggtgca ctgaacagat cacaagggca accggacacc 1320
ggggatgggg agacccaatt tctggatctg atgagagcgg tggcaaatag catgagagaa 1380ggggatgggg agacccaatt tctggatctg atgagagcgg tggcaaatag catgagagaa 1380
gcgccaaact ctgcgcaggg cacccctcaa ccggggcctc ccccaacccc tgggccctct 1440gcgccaaact ctgcgcaggg cacccctcaa ccggggcctc ccccaacccc tgggccctct 1440
caagacaatg acaccgactg ggggtactga 1470caagacaatg acaccgactg ggggtactga 1470
<210> 3<210> 3
<211> 1194<211> 1194
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 3<400> 3
atggagatgg ccacctttac agatgcggag atcgacgagc tatttgagac cagtggaact 60atggagatgg ccacctttac agatgcggag atcgacgagc tatttgagac cagtggaact 60
gtcattgaca gcataattac ggcccaggga aaaccagtag agactgttgg aaggagtgca 120gtcattgaca gcataattac ggcccaggga aaaccagtag agactgttgg aaggagtgca 120
atcccacaag gcaaaactaa ggctttgagc gcagcatggg agaagcatgg gagcatccag 180atcccacaag gcaaaactaa ggctttgagc gcagcatggg agaagcatgg gagcatccag 180
tcaccagcca gccaagacac ccctgatcga caggacagat cagataaaca actgtccaca 240tcaccagcca gccaagacac ccctgatcga caggacagat cagataaaca actgtccaca 240
cccgagcaag cgagtccaaa cgacagcccc ccagccacat ccactgacca gcctcccact 300cccgagcaag cgagtccaaa cgacagcccc ccagccacat ccactgacca gcctcccact 300
caggctgcag atgaggccgg cgatacacag ctcaagaccg gagcaagcaa ctctctgctg 360caggctgcag atgaggccgg cgatacacag ctcaagaccg gagcaagcaa ctctctgctg 360
tcgatgcttg ataaactcag caataagtca tctaatgcta aaaagggccc agggtcgagc 420tcgatgcttg ataaactcag caataagtca tctaatgcta aaaagggccc agggtcgagc 420
cctcaagaaa ggcatcatca acgtctgact caacaacagg ggagtcaaca aagccgcgga 480cctcaagaaa ggcatcatca acgtctgact caacaacagg ggagtcaaca aagccgcgga 480
aacagccaag agagaccgca gaaccaggcc aaggccatcc ctggaaacca ggtcacagac 540aacagccaag agagaccgca gaaccaggcc aaggccatcc ctggaaacca ggtcacagac 540
gcgaacacag catatcatgg acaatgggag gagtcacaac tatcagctgg tgcaacccat 600gcgaacacag catatcatgg acaatgggag gagtcacaac tatcagctgg tgcaacccat 600
catgctctcc gatcagagca gagccaagac aatactcctg cacctgtgga tcatgtccag 660catgctctcc gatcagagca gagccaagac aatactcctg cacctgtgga tcatgtccag 660
ctacctgtcg actttgtgca ggcgatgatg tctatgatgg aggcgatatc acagagggta 720ctacctgtcg actttgtgca ggcgatgatg tctatgatgg aggcgatatc acagagggta 720
agtaaagttg actatcagct ggaccttgtc ttgaaacaga catcttctat ccccatgatg 780agtaaagttg actatcagct ggaccttgtc ttgaaacaga catcttctat ccccatgatg 780
cggtctgaaa tccagcagct gaaaacgtct gttgcggtca tggaagccaa tttgggcatg 840cggtctgaaa tccagcagct gaaaacgtct gttgcggtca tggaagccaa tttgggcatg 840
atgaagatcc tggaccctgg ttgtgccaac gtttcatctc taagtgatct acgggcagtt 900atgaagatcc tggaccctgg ttgtgccaac gtttcatctc taagtgatct acgggcagtt 900
gcccgatccc acccggtttt aatttctggc cccggagacc catctcctta tgtgacccaa 960gcccgatccc acccggtttt aatttctggc cccggagacc catctcctta tgtgacccaa 960
gggggcgaaa tggcactcaa taaactttcg caaccggtgc aacacccctc tgaattgatt 1020gggggcgaaa tggcactcaa taaactttcg caaccggtgc aacacccctc tgaattgatt 1020
aaacccgcca cggcaagcgg gcctgatata ggagtggaga aagacactgt ccgtgcattg 1080aaacccgcca cggcaagcgg gcctgatata ggagtggaga aagacactgt ccgtgcattg 1080
atcatgtcac gccctatgca tccgagctct tcagctaggc tcttgagcaa actggacgca 1140atcatgtcac gccctatgca tccgagctct tcagctaggc tcttgagcaa actggacgca 1140
gccggatcga ttgaggaaat cagaaaaatc aagcgccttg cactgaatgg ctaa 1194gccggatcga ttgaggaaat cagaaaaatc aagcgccttg cactgaatgg ctaa 1194
<210> 4<210> 4
<211> 1095<211> 1095
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 4<400> 4
atggactcat ctaggacaat cgggctgtac tttgattcta cccttccttc tagcaacctg 60atggactcat ctaggacaat cgggctgtac tttgattcta cccttccttc tagcaacctg 60
ctagcattcc cgatagtcct acaagacaca ggggacggga agaagcaaat cgccccgcaa 120ctagcattcc cgatagtcct acaagacaca ggggacggga agaagcaaat cgccccgcaa 120
tacaggatcc agcgtcttga ctcgtggaca gacagcaaag aagactcggt attcatcacc 180tacaggatcc agcgtcttga ctcgtggaca gacagcaaag aagactcggt attcatcacc 180
acctatggat tcatctttca ggttgggaat gaagaagcca ctgtcggcat gatcaatgat 240acctatggat tcatctttca ggttgggaat gaagaagcca ctgtcggcat gatcaatgat 240
aatcccaagc gcgagttact ttccactgcc atgctatgcc tagggagtgt accaaatgtc 300aatcccaagc gcgagttact ttccactgcc atgctatgcc tagggagtgt accaaatgtc 300
ggagatcttg ttgagctggc aagggcctgc ctcactatgg tggtaacatg caagaagagt 360ggagatcttg ttgagctggc aagggcctgc ctcactatgg tggtaacatg caagaagagt 360
gcaactaaca ccgagagaat ggtcttctca gtagtgcagg caccccaggt gctgcaaagc 420gcaactaaca ccgagagaat ggtcttctca gtagtgcagg caccccaggt gctgcaaagc 420
tgtagggttg tggcaaacaa atactcgtcg gtgaatgcag tcaagcacgt gaaagcacca 480tgtagggttg tggcaaacaa atactcgtcg gtgaatgcag tcaagcacgt gaaagcacca 480
gagaagattc ctgggagcgg aaccctagag tacaaagtga actttgtctc tctgaccgtg 540gagaagattc ctgggagcgg aaccctagag tacaaagtga actttgtctc tctgaccgtg 540
gtgccaagaa aggacgtcta caagatacca actgcagcac ttaaggtctc tggctcaagt 600gtgccaagaa aggacgtcta caagatacca actgcagcac ttaaggtctc tggctcaagt 600
ctgtacaatc ttgcgctcaa tgtcactatt gatgtggagg tagacccgaa gagcccgttg 660ctgtacaatc ttgcgctcaa tgtcactatt gatgtggagg tagacccgaa gagcccgttg 660
gtcaaatccc tttccaagtc cgacagtggg tactatgcta atctcttctt acatattggg 720gtcaaatccc tttccaagtc cgacagtggg tactatgcta atctcttctt acatattggg 720
cttatgtcca ctgtagataa gaaggggaag aaagtgacat ttgacaagct ggaaaggaag 780cttatgtcca ctgtagataa gaaggggaag aaagtgacat ttgacaagct ggaaaggaag 780
ataaggagac ttgatctatc tgtagggctt agtgacgtgc tcggaccttc cgtgcttgta 840ataaggagac ttgatctatc tgtagggctt agtgacgtgc tcggaccttc cgtgcttgta 840
aaggcgagag gtgcacggac taagctgctg gcacctttct tctctagcag tgggacagcc 900aaggcgagag gtgcacggac taagctgctg gcacctttct tctctagcag tgggacagcc 900
tgctatccca tagcaaatgc ctctcctcag gtggccaaga tactctggag ccaaaccgcg 960tgctatccca tagcaaatgc ctctcctcag gtggccaaga tactctggag ccaaaccgcg 960
tacctgcgga gtgtaaaagt cattatccaa gcgggcaccc agcgtgctgt cgcagtgacc 1020tacctgcgga gtgtaaaagt cattatccaa gcgggcaccc agcgtgctgt cgcagtgacc 1020
gccgaccacg aggttacctc tactaagctg gagaaggggc ataccattgc caaatacaat 1080gccgaccacg aggttacctc tactaagctg gagaaggggc ataccattgc caaatacaat 1080
cccttcaaga aatag 1095cccttcaaga aatag 1095
<210> 5<210> 5
<211> 1662<211> 1662
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 5<400> 5
atgggctcca gatcttctac caggatccca gtacctctca tgctgaccgt ccgagtcatg 60atgggctcca gatcttctac caggatccca gtacctctca tgctgaccgt ccgagtcatg 60
ttggcactga gttgcgtctg tccgaccagc gcccttgatg gcaggcctct tgcagctgca 120ttggcactga gttgcgtctg tccgaccagc gcccttgatg gcaggcctct tgcagctgca 120
gggattgtgg taacgggaga caaagcagtc aacatataca cctcatctca gacagggtca 180gggattgtgg taacgggaga caaagcagtc aacatataca cctcatctca gacagggtca 180
atcataatca agttactccc aaatatgccc aaggataaag aggcgtgtgc aaaagccccg 240atcataatca agttactccc aaatatgccc aaggataaag aggcgtgtgc aaaagccccg 240
ttggaggcat acaacaggac attgactact ttgctcaccc cccttggtga ttctatccgt 300ttggaggcat acaacaggac attgactact ttgctcaccc cccttggtga ttctatccgt 300
aggatacaag agtctgtgac cacgtccgga ggagggaaac agggacgtct tataggcgcc 360aggatacaag agtctgtgac cacgtccgga ggagggaaac agggacgtct tataggcgcc 360
attatcggtg gtgtagctct cggggttgca accgctgcac agataacagc agcctcggct 420attatcggtg gtgtagctct cggggttgca accgctgcac agataacagc agcctcggct 420
ctgatacaag ccaatcaaaa tgctgccaac atactccggc taaaagagag cattgctgca 480ctgatacaag ccaatcaaaa tgctgccaac atactccggc taaaagagag cattgctgca 480
accaatgagg ctgtgcacga ggtcactaat ggattatcac aactagcagt ggcagttggg 540accaatgagg ctgtgcacga ggtcactaat ggattatcac aactagcagt ggcagttggg 540
aagatgcagc aatttgttaa tgaccagttt aataaaacag ctcaggaatt ggactgtata 600aagatgcagc aatttgttaa tgaccagttt aataaaacag ctcaggaatt ggactgtata 600
aaaattacac agcaggttgg tgtagaactc aacctgtacc taactgaatt gactacagta 660aaaattacac agcaggttgg tgtagaactc aacctgtacc taactgaatt gactacagta 660
ttcgggccac aaatcacttc ccctgcctta actcagctga ctatccaggc gctttacaat 720ttcgggccac aaatcacttc ccctgcctta actcagctga ctatccaggc gctttacaat 720
ctagctggtg ggaatatgga ttacttgttg actaagttag gtgtggggaa caaccaactc 780ctagctggtg ggaatatgga ttacttgttg actaagttag gtgtggggaa caaccaactc 780
agctcattaa ttagtagtgg cctgatcacc ggcaacccta ttctgtacga ctcacagact 840agctcattaa ttagtagtgg cctgatcacc ggcaacccta ttctgtacga ctcacagact 840
caactcttgg gtatacaggt aaccctaccc tcagtcggga acctaaataa tatgcgtgcc 900caactcttgg gtatacaggt aaccctaccc tcagtcggga acctaaataa tatgcgtgcc 900
acctacctgg aaaccttgtc tgtaagtaca accaaaggat ttgcctcagc acttgtccca 960acctacctgg aaaccttgtc tgtaagtaca accaaaggat ttgcctcagc acttgtccca 960
aaagtagtga cacaggtcgg ttccgtgata gaagagcttg acacctcgta ctgtatagag 1020aaagtagtga cacaggtcgg ttccgtgata gaagagcttg acacctcgta ctgtatagag 1020
accgatttgg atctatattg tacaagaata gtgacattcc ctatgtctcc tggtatttat 1080accgatttgg atctatattg tacaagaata gtgacattcc ctatgtctcc tggtatttat 1080
tcctgtttga gtggcaatac atctgcttgc atgtactcaa agactgaagg cgcactcact 1140tcctgtttga gtggcaatac atctgcttgc atgtactcaa agactgaagg cgcactcact 1140
acgccgtata tgaccctcaa aggctcagtt attgctaact gtaagatgac aacatgtaga 1200acgccgtata tgaccctcaa aggctcagtt attgctaact gtaagatgac aacatgtaga 1200
tgtgcagacc ccccgggtat catatcgcaa aattatggag aagctgtgtc tctaatagat 1260tgtgcagacc ccccgggtat catatcgcaa aattatggag aagctgtgtc tctaatagat 1260
aggcaatcat gcaatatctt atccttagac gggataactt tgaggctcag tggggaattt 1320aggcaatcat gcaatatctt atccttagac gggataactt tgaggctcag tggggaattt 1320
gatgcaactt atcaaaagaa tatctcaata caagattctc aagtaatagt gacaggcaat 1380gatgcaactt atcaaaagaa tatctcaata caagattctc aagtaatagt gacaggcaat 1380
cttgatatct cgactgagct tgggaatgtc aacaactcga taagtaatgc tttggataag 1440cttgatatct cgactgagct tgggaatgtc aacaactcga taagtaatgc tttggataag 1440
ttagaggaaa gcaacagcaa actagataag gtcaatgtca aactgaccag cacatccgct 1500ttagaggaaa gcaacagcaa actagataag gtcaatgtca aactgaccag cacatccgct 1500
cttattacct atatcgtttt aactgtcata tctcttgtat gtggtatact tagcctggtt 1560cttattacct atatcgtttt aactgtcata tctcttgtat gtggtatact tagcctggtt 1560
ctagcatgct acctgatgta caagcaaaag gcgcaacaga agaccttgtt gtggcttggg 1620ctagcatgct acctgatgta caagcaaaag gcgcaacaga agaccttgtt gtggcttggg 1620
aataataccc tagaccagat gagggccact acaaaaatgt ga 1662aataataccc tagaccagat gagggccact acaaaaatgt ga 1662
<210> 6<210> 6
<211> 1851<211> 1851
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 6<400> 6
atggaccgcg cagttagcca agttgcgctg gagaatgatg aaagagaggc aaagaataca 60atggaccgcg cagttagcca agttgcgctg gagaatgatg aaagagaggc aaagaataca 60
tggcgcttgg tattccggat cgcaatccta ctctcaacgg tggtgacctt agccatctct 120tggcgcttgg tattccggat cgcaatccta ctctcaacgg tggtgacctt agccatctct 120
gcagccgccc ttgcatatag catggaggcc agcacaccta gcgatcttgt aggcataccg 180gcagccgccc ttgcatatag catggaggcc agcacaccta gcgatcttgt aggcataccg 180
actgcgatct ctagagcaga ggaaaagatt acatctgcac tcggttccaa tcaagatgta 240actgcgatct ctagagcaga ggaaaagatt acatctgcac tcggttccaa tcaagatgta 240
gtagatagga tatataagca ggtggccctc gaatctccac tggcattgct aaacaccgaa 300gtagatagga tatataagca ggtggccctc gaatctccac tggcattgct aaacaccgaa 300
tctacaatta tgaacgcaat aacgtctctc tcttatcgaa tcaatggggc cgcaaatagc 360tctacaatta tgaacgcaat aacgtctctc tcttatcgaa tcaatggggc cgcaaatagc 360
agcggatgtg gagcacccat tcatgatcca gattatattg gaggaatagg taaagaactt 420agcggatgtg gagcacccat tcatgatcca gattatattg gaggaatagg taaagaactt 420
attgtagatg atgctagcga cgtcacatca tactatccct ctgcgttcca agaacacctg 480attgtagatg atgctagcga cgtcacatca tactatccct ctgcgttcca agaacacctg 480
aactttatcc cggcgcctac tacaggatca ggttgcactc ggataccctc atttgacatg 540aactttatcc cggcgcctac tacaggatca ggttgcactc ggataccctc atttgacatg 540
agcgctaccc actactgtta tactcacaat gtgatattat ctggctgcag agatcactcg 600agcgctaccc actactgtta tactcacaat gtgatattat ctggctgcag agatcactcg 600
cactcacatc aatatttagc acttggtgtg cttcggacat ctgcaacagg gagggtattc 660cactcacatc aatatttagc acttggtgtg cttcggacat ctgcaacagg gagggtattc 660
ttttccactc tgcgttccat caatctggat gacacccaaa atcggaagtc ttgcagtgtg 720ttttccactc tgcgttccat caatctggat gacacccaaa atcggaagtc ttgcagtgtg 720
agtgcaaccc ccttgggttg tgatatgctg tgctctaaag tcacagagac tgaagaagag 780agtgcaaccc ccttgggttg tgatatgctg tgctctaaag tcacagagac tgaagaagag 780
gattataact cagctatccc cacgtcgatg gtacatggaa ggttagggtt cgacggccaa 840gattataact cagctatccc cacgtcgatg gtacatggaa ggttagggtt cgacggccaa 840
taccacgaga aggacctaga tgtcacaaca ctattcgagg actgggtggc aaactaccca 900taccacgaga aggacctaga tgtcacaaca ctattcgagg actgggtggc aaactaccca 900
ggagtagggg gcgggtcttt tattgacaac cgcgtatggt tcccagttta cggagggcta 960ggagtagggg gcgggtcttt tattgacaac cgcgtatggt tcccagttta cggagggcta 960
aaacccaatt cgcccagtga caccgcacaa gaagggaaat atgtaatata caagcgatac 1020aaacccaatt cgcccagtga caccgcacaa gaagggaaat atgtaatata caagcgatac 1020
aatgacacat gtccagatga gcaagattat cagattcaaa tggctaagtc ttcatataag 1080aatgacacat gtccagatga gcaagattat cagattcaaa tggctaagtc ttcatataag 1080
cctgggcggt ttggagggaa acgcgtacag caggccatct tatctatcaa agtgtcaaca 1140cctgggcggt ttggagggaa acgcgtacag caggccatct tatctatcaa agtgtcaaca 1140
tccttgggcg aggacccggt actgactgta ccgcccaaca cagtaacact catgggggcc 1200tccttgggcg aggacccggt actgactgta ccgcccaaca cagtaacact catgggggcc 1200
gaaggcagag ttctcacagt agggacatct catttccttt atcagcgagg gtcatcatac 1260gaaggcagag ttctcacagt agggacatct catttccttt atcagcgagg gtcatcatac 1260
ttctcccctg ccctactata tcctatgata gtcagcaaca aaacagccac tcttcatagt 1320ttctcccctg ccctactata tcctatgata gtcagcaaca aaacagccac tcttcatagt 1320
ccttatacat tcaatgcctt cactcgacca ggtagtgtcc cttgccaggc ttcagcaaga 1380ccttatacat tcaatgcctt cactcgacca ggtagtgtcc cttgccaggc ttcagcaaga 1380
tgccctaact catgtgttac cggagtctat actgatccat atcccttggt cttctatagg 1440tgccctaact catgtgttac cggagtctat actgatccat atcccttggt cttctatagg 1440
aaccacacct tgcgaggggt attcgggacg atgcttgatg ataaacaagc aagactcaac 1500aaccacacct tgcgaggggt attcgggacg atgcttgatg ataaacaagc aagactcaac 1500
cctgtatctg cagtatttga cagcatatcc cgcagtcgca taacccgggt gagttcaagc 1560cctgtatctg cagtatttga cagcatatcc cgcagtcgca taacccgggt gagttcaagc 1560
agcaccaagg cagcatacac aacatcaaca tgttttaaag ttgtaaagac caataaaacc 1620agcaccaagg cagcatacac aacatcaaca tgttttaaag ttgtaaagac caataaaacc 1620
tattgtctca gcattgccga aatatccaat accctcttcg gggaattcag aatcgtccct 1680tattgtctca gcattgccga aatatccaat accctcttcg gggaattcag aatcgtccct 1680
ttactagttg agattctcaa ggatgatggg gttagagaag ccaggtctag ccggttgagt 1740ttactagttg agattctcaa ggatgatggg gttagagaag ccaggtctag ccggttgagt 1740
caactgcgag agggttggaa agatgacatt gtatcaccta tcttttgcga cgccaagaat 1800caactgcgag agggttggaa agatgacatt gtatcaccta tcttttgcga cgccaagaat 1800
caaactgaat accggcgcga gctcgagtcc tacgctgcca gttggccata a 1851caaactgaat accggcgcga gctcgagtcc tacgctgcca gttggccata a 1851
<210> 7<210> 7
<211> 6615<211> 6615
<212> DNA<212> DNA
<213> Newcastle disease virus<213> Newcastle disease virus
<400> 7<400> 7
atggcgagct ccggtcccga gagggcggag catcagatta tcctaccaga gtcacacctg 60atggcgagct ccggtcccga gagggcggag catcagatta tcctaccaga gtcacacctg 60
tcttcaccat tagtcaagca caaactactc tattactgga aattaactgg gctaccactc 120tcttcaccat tagtcaagca caaactactc tattactgga aattaactgg gctaccactc 120
cctgacgagt gtgacttcga ccacctcatt ctcagccgac aatggaagaa aatacttgaa 180cctgacgagt gtgacttcga ccacctcatt ctcagccgac aatggaagaa aatacttgaa 180
tcggcctccc ctgacactga gagaatgata aaacttggaa gggcagtgca ccagactctc 240tcggcctccc ctgacactga gagaatgata aaacttggaa gggcagtgca ccagactctc 240
aaccacaatt ccaagataac cggagtactc catcccaggt gtttagaaga attggctagt 300aaccacaatt ccaagataac cggagtactc catcccaggt gtttagaaga attggctagt 300
attgaggttc ctgactcaac caacaagttt cggaagatcg agaagaaaat ccaaattcac 360attgaggttc ctgactcaac caacaagttt cggaagatcg agaagaaaat ccaaattcac 360
aacacaaggt atggagaact gttcacaaga ctgtgcacgc atgtagagaa gaaattgttg 420aacacaaggt atggagaact gttcacaaga ctgtgcacgc atgtagagaa gaaattgttg 420
ggatcatctt ggtctaataa tgtcccccgg tcagaagagt tcaacagcat ccgtacagat 480ggatcatctt ggtctaataa tgtcccccgg tcagaagagt tcaacagcat ccgtacagat 480
ccggcattct ggtttcactc aaaatggtcc acaactaagt ttgcatggct ccatataaaa 540ccggcattct ggtttcactc aaaatggtcc acaactaagt ttgcatggct ccatataaaa 540
cagattcaaa ggcatctgat tgtggcagca agaacaaggt ccgcagccaa caaattggtg 600cagattcaaa ggcatctgat tgtggcagca agaacaaggt ccgcagccaa caaattggtg 600
acgctgaccc ataaggtagg ccaagtcttt gttactcctg agcttgtcat tgtgacacat 660acgctgaccc ataaggtagg ccaagtcttt gttactcctg agcttgtcat tgtgacacat 660
acagatgaga acaagttcac gtgtcttacc caggaacttg tgttgatgta tgcagatatg 720acagatgaga acaagttcac gtgtcttacc caggaacttg tgttgatgta tgcagatatg 720
atggagggca gagatatggt caacataata tcatccacgg cggcacatct caggagccta 780atggagggca gagatatggt caacataata tcatccacgg cggcacatct caggagccta 780
tcagagaaaa ttgatgacat tctgcggtta gtagatgccc tggcaaaaga tctgggtaat 840tcagagaaaa ttgatgacat tctgcggtta gtagatgccc tggcaaaaga tctgggtaat 840
caagtctacg atgttgtagc actcatggag ggatttgcat acggcgccgt ccagctgctt 900caagtctacg atgttgtagc actcatggag ggatttgcat acggcgccgt ccagctgctt 900
gagccgtcag gtacattcgc aggggatttc ttcgcattca acctgcagga gctcaaagac 960gagccgtcag gtacattcgc aggggatttc ttcgcattca acctgcagga gctcaaagac 960
actttgatcg gcctccttcc taaggatata gcagaatctg tgactcacgc aatagccact 1020actttgatcg gcctccttcc taaggatata gcagaatctg tgactcacgc aatagccact 1020
gtattctctg gcttagaaca aaatcaagcg gctgagatgc tgtgcctgtt gcgtctatgg 1080gtattctctg gcttagaaca aaatcaagcg gctgagatgc tgtgcctgtt gcgtctatgg 1080
ggccacccat tacttgagtc ccgtattgcg gcaaaagcag taaggagcca aatgtgcgca 1140ggccacccat tacttgagtc ccgtattgcg gcaaaagcag taaggagcca aatgtgcgca 1140
ccaaaaatgg tagactttga tatgatcctc caggtattgt ctttctttaa aggaacaatc 1200ccaaaaatgg tagactttga tatgatcctc caggtattgt ctttctttaa aggaacaatc 1200
atcaacggat acagaaagaa gaatgcaggt gtttggccac gtgtcaaagt agaaacgata 1260atcaacggat acagaaagaa gaatgcaggt gtttggccac gtgtcaaagt agaaacgata 1260
tacgggaagg tcattgggca gctacacgct gattcagcgg agatttcaca cgatatcatg 1320tacgggaagg tcattgggca gctacacgct gattcagcgg agatttcaca cgatatcatg 1320
ttgagagagt acaagagttt atctgcgctt gaattcgagc catgtataga atacgaccct 1380ttgagagagt acaagagttt atctgcgctt gaattcgagc catgtataga atacgaccct 1380
atcaccaatc tgagcatgtt tctaaaagac aaggcgatcg cacacccgaa agacaactgg 1440atcaccaatc tgagcatgtt tctaaaagac aaggcgatcg cacacccgaa agacaactgg 1440
ctcgccgcgt ttaggcgaaa ccttctctct gaggaccaga agaaacatgt aaaggaggca 1500ctcgccgcgt ttaggcgaaa ccttctctct gaggaccaga agaaacatgt aaaggaggca 1500
acctctacta accgtctctt gatagagttc ttagagtcaa atgattttga tccatataag 1560acctctacta accgtctctt gatagagttc ttagagtcaa atgattttga tccatataag 1560
gagatggaat atctgacgac ccttgagtac ctaagagatg acaatgtggc agtatcatac 1620gagatggaat atctgacgac ccttgagtac ctaagagatg acaatgtggc agtatcatac 1620
tcgctcaagg agaaggaagt gaaggttaat gggcggattt ttgctaagct aacaaagaaa 1680tcgctcaagg agaaggaagt gaaggttaat gggcggattt ttgctaagct aacaaagaaa 1680
ttaaggaact gtcaagtgat ggcggaaggg atcttagctg accagattgc acctttcttt 1740ttaaggaact gtcaagtgat ggcggaaggg atcttagctg accagattgc acctttcttt 1740
caagggaatg gggtcattca ggatagcata tctttaacca agagtatgct agcgatgagt 1800caagggaatg gggtcattca ggatagcata tctttaacca agagtatgct agcgatgagt 1800
caattgtctt tcaacagcaa taagaaacgt atcactgact gcaaagaaag agtagcctca 1860caattgtctt tcaacagcaa taagaaacgt atcactgact gcaaagaaag agtagcctca 1860
aaccgcaatc acgatcaaaa gagcaagaat cgtcggagag ttgccacttt tataacgact 1920aaccgcaatc acgatcaaaa gagcaagaat cgtcggagag ttgccacttt tataacgact 1920
gacctgcaaa agtactgtct taattggaga tatcagacaa tcaaactgtt cgctcatgcc 1980gacctgcaaa agtactgtct taattggaga tatcagacaa tcaaactgtt cgctcatgcc 1980
atcaatcagc tgatgggctt acctcacttc ttcgaatgga ttcatctaag actaatggat 2040atcaatcagc tgatgggctt acctcacttc ttcgaatgga ttcatctaag actaatggat 2040
actacgatgt ttgtaggaga ccctttcaat cccccaagtg acccaactga ctgtgatctc 2100actacgatgt ttgtaggaga ccctttcaat cccccaagtg acccaactga ctgtgatctc 2100
tcaagagtcc caaatgatga catatatatt gtcagtgcta gagggggtat tgagggatta 2160tcaagagtcc caaatgatga catatatatt gtcagtgcta gagggggtat tgagggatta 2160
tgtcagaagc tatggacaat gatctcaatt gctgcaatcc aacttgctgc agcaagatca 2220tgtcagaagc tatggacaat gatctcaatt gctgcaatcc aacttgctgc agcaagatca 2220
cattgtcgcg tcgcctgtat ggtacagggt gacaatcaag taatagctgt aacgagagag 2280cattgtcgcg tcgcctgtat ggtacagggt gacaatcaag taatagctgt aacgagagag 2280
gtaaggtcag atgactcccc ggaaatggtg ttaacacaat tgcatcaagc cagtgataat 2340gtaaggtcag atgactcccc ggaaatggtg ttaacacaat tgcatcaagc cagtgataat 2340
ttcttcaagg aattgattca tgttaatcat ttgattggcc ataatttgaa ggatcgtgaa 2400ttcttcaagg aattgattca tgttaatcat ttgattggcc ataatttgaa ggatcgtgaa 2400
acaatcagat cagacacatt cttcatatac agcaaacgaa tattcaaaga tggagcaata 2460acaatcagat cagacacatt cttcatatac agcaaacgaa tattcaaaga tggagcaata 2460
ctcagtcaag tcctcaaaaa ttcatctaaa ttagtgctaa tatcaggcga ccttagtgaa 2520ctcagtcaag tcctcaaaaa ttcatctaaa ttagtgctaa tatcaggcga ccttagtgaa 2520
aacaccgtaa tgtcctgtgc caacattgca tctactatag cacggctgtg cgagaacggg 2580aacaccgtaa tgtcctgtgc caacattgca tctactatag cacggctgtg cgagaacggg 2580
cttccaaagg atttctgtta ttacttaaac tacctgatga gttgcgtgca gacatacttt 2640cttccaaagg atttctgtta ttacttaaac tacctgatga gttgcgtgca gacatacttt 2640
gattctgagt tttccatcac taacagctcg caccccgatt ctaaccagtc gtggattgaa 2700gattctgagt tttccatcac taacagctcg caccccgatt ctaaccagtc gtggattgaa 2700
gacatctctt ttgtgcactc atatgtcctg acccctgccc agctaggggg actgagcaac 2760gacatctctt ttgtgcactc atatgtcctg acccctgccc agctaggggg actgagcaac 2760
ctccaatact caaggctcta cacgaggaac atcggtgacc cgggaactac tgcttttgca 2820ctccaatact caaggctcta cacgaggaac atcggtgacc cgggaactac tgcttttgca 2820
gagatcaagc gattagaagc agtggggtta ctaagttcta gtattatgac taacatctta 2880gagatcaagc gattagaagc agtggggtta ctaagttcta gtattatgac taacatctta 2880
actaggccgc ctggaaatgg agattgggcc agtctgtgta acgaccctta ctctttcaat 2940actaggccgc ctggaaatgg agattgggcc agtctgtgta acgaccctta ctctttcaat 2940
tttgagactg tcgcgagtcc aaatattgtc cttaagaaac atacacaaag agtcctattt 3000tttgagactg tcgcgagtcc aaatattgtc cttaagaaac atacacaaag agtcctattt 3000
gaaacttgtt caaatccctt attatctggc gtgcatacag aggataatga ggcagaagag 3060gaaacttgtt caaatccctt attatctggc gtgcatacag aggataatga ggcagaagag 3060
aaggcgttgg ctgaattttt actcaatcaa gaagtaattc atccacgtgt cgcacatgct 3120aaggcgttgg ctgaattttt actcaatcaa gaagtaattc atccacgtgt cgcacatgct 3120
atcatggaag caagctctat aggtaggagg aagcagattc aagggcttgt tgacacaaca 3180atcatggaag caagctctat aggtaggagg aagcagattc aagggcttgt tgacacaaca 3180
aacaccgtaa tcaagattgc attgactagg aggccacttg gcatcaagag gctgatgcgg 3240aacaccgtaa tcaagattgc attgactagg aggccacttg gcatcaagag gctgatgcgg 3240
atagttaact actcgagcat gcatgcaatg ctgtttagag acgatgtttt ctcatctaac 3300atagttaact actcgagcat gcatgcaatg ctgtttagag acgatgtttt ctcatctaac 3300
aggtctaacc accccttagt ttcctctaat atgtgttctc tgacgctagc agactatgca 3360aggtctaacc accccttagt ttcctctaat atgtgttctc tgacgctagc agactatgca 3360
cggaatagaa gctggtcacc attgacgggg ggtagaaaga tactgggtgt atctaatcct 3420cggaatagaa gctggtcacc attgacgggg ggtagaaaga tactgggtgt atctaatcct 3420
gatactatag aacttgtaga gggtgagatc cttagcgtca gcggaggatg cacaagatgt 3480gatactatag aacttgtaga gggtgagatc cttagcgtca gcggaggatg cacaagatgt 3480
gacagcggag atgaacaatt cacttggttc catcttccga gcaatataga actgaccgat 3540gacagcggag atgaacaatt cacttggttc catcttccga gcaatataga actgaccgat 3540
gacaccagca agaatcctcc gatgagagtg ccgtacctcg ggtcaaagac tcaagagagg 3600gacaccagca agaatcctcc gatgagagtg ccgtacctcg ggtcaaagac tcaagagagg 3600
agggccgcct cgcttgcgaa aatagctcat atgtcaccac atgtgaaagc tgctctaagg 3660agggccgcct cgcttgcgaa aatagctcat atgtcaccac atgtgaaagc tgctctaagg 3660
gcatcatccg tgttgatctg ggcttatgga gacaacgaag taaattggac tgctgctctt 3720gcatcatccg tgttgatctg ggcttatgga gacaacgaag taaattggac tgctgctctt 3720
aaaattgcaa gatctcggtg caatataaac tcagagtatc ttcgactatt gtccccctta 3780aaaattgcaa gatctcggtg caatataaac tcagagtatc ttcgactatt gtccccctta 3780
cccacagctg ggaatctcca acatagactg gatgacggca taactcagat gacattcacc 3840cccacagctg ggaatctcca acatagactg gatgacggca taactcagat gacattcacc 3840
cctgcatctc tctacagggt gtcaccttat attcacatat ccaatgattc tcaaaggtta 3900cctgcatctc tctacagggt gtcaccttat attcacatat ccaatgattc tcaaaggtta 3900
ttcacggaag aaggagtcaa agagggaaat gtagtttatc agcaaatcat gctcttgggt 3960ttcacggaag aaggagtcaa agagggaaat gtagtttatc agcaaatcat gctcttgggt 3960
ttatctctaa tcgaatcact cttcccgatg acgacaacca ggacatacga tgagatcaca 4020ttatctctaa tcgaatcact cttcccgatg acgacaacca ggacatacga tgagatcaca 4020
ttgcacctcc acagtaaatt tagctgctgt atcagggaag caccggttgc agttcctttc 4080ttgcacctcc acagtaaatt tagctgctgt atcagggaag caccggttgc agttcctttc 4080
gagttactcg ggatggcacc agaactaagg acagtgacct caaataagtt tatgtatgat 4140gagttactcg ggatggcacc agaactaagg acagtgacct caaataagtt tatgtatgat 4140
cctagtcctg tatcggaggg tgactttgcg agacttgact tagctatctt taagagttat 4200cctagtcctg tatcggaggg tgactttgcg agacttgact tagctatctt taagagttat 4200
gagcttaatc tagaatcata tcccacaata gagctaatga acattctttc aatatccagc 4260gagcttaatc tagaatcata tcccacaata gagctaatga acattctttc aatatccagc 4260
gggaagttaa tcggccagtc tgtggtttct tatgatgaag atacctccat aaagaatgac 4320gggaagttaa tcggccagtc tgtggtttct tatgatgaag atacctccat aaagaatgac 4320
gccataatag tgtatgacaa cacccggaat tggatcagcg aagctcagaa ttcagatgtg 4380gccataatag tgtatgacaa cacccggaat tggatcagcg aagctcagaa ttcagatgtg 4380
gtccgcctat tcgagtatgc agcacttgaa gtgcttctcg actgttctta tcagctctac 4440gtccgcctat tcgagtatgc agcacttgaa gtgcttctcg actgttctta tcagctctac 4440
tatctgagag taagaggcct agacaatatc gtgttgtata tgagtgactt atataagaat 4500tatctgagag taagaggcct agacaatatc gtgttgtata tgagtgactt atataagaat 4500
atgccaggaa ttctactttc caacattgca gctacaatat ctcatcccat cattcattca 4560atgccaggaa ttctactttc caacattgca gctacaatat ctcatcccat cattcattca 4560
agattgcatg cagtaggcct ggtcaatcac gacgggtcac accaacttgc agacacagat 4620agattgcatg cagtaggcct ggtcaatcac gacgggtcac accaacttgc agacacagat 4620
ttcatcgaaa tgtctgcaaa actattagtc tcttgcactc gacgcgtggt ctcaggttta 4680ttcatcgaaa tgtctgcaaa actattagtc tcttgcactc gacgcgtggt ctcaggttta 4680
tatgcaggga ataagtatga tctgctgttc ccgtctgtct tagatgataa cctgagtgag 4740tatgcaggga ataagtatga tctgctgttc ccgtctgtct tagatgataa cctgagtgag 4740
aagatgcttc agctgatatc tcggttatgc tgcctgtata cggtgctctt tgctacaaca 4800aagatgcttc agctgatatc tcggttatgc tgcctgtata cggtgctctt tgctacaaca 4800
agagagatcc cgaaaataag aggcttatct gcagaagaga agtgttcagt acttactgag 4860agagagatcc cgaaaataag aggcttatct gcagaagaga agtgttcagt acttactgag 4860
tacctactgt cagatgctgt gaaaccatta cttagttctg agcaagtgag ctctatcatg 4920tacctactgt cagatgctgt gaaaccatta cttagttctg agcaagtgag ctctatcatg 4920
tctcctaaca tagttacgtt cccagctaat ctatattaca tgtctcggaa gagccttaat 4980tctcctaaca tagttacgtt cccagctaat ctatattaca tgtctcggaa gagccttaat 4980
ttgattaggg aaagagagga cagggacact atcttggcat tgttgttccc ccaagagcca 5040ttgattaggg aaagagagga cagggacact atcttggcat tgttgttccc ccaagagcca 5040
ctacttgagt tccccttagt acaagatatt ggcgctcgag tgaaagatcc attcacccga 5100ctacttgagt tccccttagt acaagatatt ggcgctcgag tgaaagatcc attcacccga 5100
caacctgcgg cgtttttaca agaattagat ttgagcgctc cagcaaggta tgacgcattt 5160caacctgcgg cgtttttaca agaattagat ttgagcgctc cagcaaggta tgacgcattt 5160
acacttagtc aggttcattc tgaacacaca tcaccaaatc cggaggacga ctacttagta 5220acacttagtc aggttcattc tgaacacaca tcaccaaatc cggaggacga ctacttagta 5220
cgatacctgt tcagaggaat agggaccgcg tcctcctctt ggtataaggc atctcacctt 5280cgatacctgt tcagaggaat agggaccgcg tcctcctctt ggtataaggc atctcacctt 5280
ctttctgtac ctgaggtcag atgtgcaagg cacgggaatt ccttatactt ggcagaagga 5340ctttctgtac ctgaggtcag atgtgcaagg cacgggaatt ccttatactt ggcagaagga 5340
agcggagcca ttatgagtct tctcgaactg catgtgccgc atgagactat ctattacaat 5400agcggagcca ttatgagtct tctcgaactg catgtgccgc atgagactat ctattacaat 5400
acgctcttct caaacgagat gaacccccca cagcggcatt tcggaccgac cccaacacag 5460acgctcttct caaacgagat gaacccccca cagcggcatt tcggaccgac cccaacacag 5460
tttctgaatt cagttgttta taggaatcta caggcggagg taccatgtaa ggatggattt 5520tttctgaatt cagttgttta taggaatcta caggcggagg taccatgtaa ggatggattt 5520
gtccaggagt tccgtccatt atggagagag aatacagaag aaagcgatct gacctcagat 5580gtccaggagt tccgtccatt atggagagag aatacagaag aaagcgatct gacctcagat 5580
aaagcagtgg gttacatcac atctgcagtg ccctaccggt ctgtatcatt gctgcactgt 5640aaagcagtgg gttacatcac atctgcagtg ccctaccggt ctgtatcatt gctgcactgt 5640
gacattgaga ttcctccagg atccaatcaa agcttactgg atcaactggc taccaatcta 5700gacattgaga ttcctccagg atccaatcaa agcttactgg atcaactggc taccaatcta 5700
tctctgattg ccatgcattc tgtaagggag ggcggggtcg tgatcatcaa agtgttgtat 5760tctctgattg ccatgcattc tgtaagggag ggcggggtcg tgatcatcaa agtgttgtat 5760
gcaatgggat attacttcca tctactcatg aacttgttca ctccgtgttc tacgaaagga 5820gcaatgggat attacttcca tctactcatg aacttgttca ctccgtgttc tacgaaagga 5820
tatattctct ctaatggcta tgcatgtaga ggggatatgg agtgttacct ggtatttgtc 5880tatattctct ctaatggcta tgcatgtaga ggggatatgg agtgttacct ggtatttgtc 5880
atgggctatc gaggtgggcc tacatttgta catgaggtag tgaggatggc aaaaactcta 5940atgggctatc gaggtgggcc tacatttgta catgaggtag tgaggatggc aaaaactcta 5940
gtgcagcggc acggtacact tttgtccaaa tcagatgaga tcacactgac taggttattt 6000gtgcagcggc acggtacact tttgtccaaa tcagatgaga tcacactgac taggttattt 6000
acctcacagc ggcagcgtgt aacagacatc ctatccagtc ctttaccgag actaataaag 6060acctcacagc ggcagcgtgt aacagacatc ctatccagtc ctttaccgag actaataaag 6060
ttcttgagaa agaatatcga tactgcgcta attgaagccg ggggacaacc cgtccgtcca 6120ttcttgagaa agaatatcga tactgcgcta attgaagccg ggggacaacc cgtccgtcca 6120
ttctgtgcag agagcttggt gaggacacta gcggacacaa ctcagatgac ccagatcatc 6180ttctgtgcag agagcttggt gaggacacta gcggacacaa ctcagatgac ccagatcatc 6180
gctagtcaca ttgacacagt cattcgatct gtgatctaca tggaggctga gggtgatctc 6240gctagtcaca ttgacacagt cattcgatct gtgatctaca tggaggctga gggtgatctc 6240
gccgacacag tgttcttatt taccccctac aatctctcta cagacggtaa aaagagaaca 6300gccgacacag tgttcttatt taccccctac aatctctcta cagacggtaa aaagagaaca 6300
tcacttaaac agtgcacaag gcagatctta gaggtcacaa tattgggtct tagagttgaa 6360tcacttaaac agtgcacaag gcagatctta gaggtcacaa tattgggtct tagagttgaa 6360
aatctcaata aagtaggtga tgtagtcagt ctagtactta aaggtatgat ttctctggag 6420aatctcaata aagtaggtga tgtagtcagt ctagtactta aaggtatgat ttctctggag 6420
gacctgatcc ctctaagaac atacttgaag cgtagtacct gccctaagta tttgaagtct 6480gacctgatcc ctctaagaac atacttgaag cgtagtacct gccctaagta tttgaagtct 6480
gttctaggta ttactaaact caaagaaatg tttacagaca cctctttatt atacttgact 6540gttctaggta ttactaaact caaagaaatg tttacagaca cctctttatt atacttgact 6540
cgtgctcaac aaaaattcta catgaaaact ataggcaacg cagtcaaggg atactacagt 6600cgtgctcaac aaaaattcta catgaaaact ataggcaacg cagtcaaggg atactacagt 6600
aactgtgact cttaa 6615aactgtgact cttaa 6615
<210> 8<210> 8
<211> 21<211> 21
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P1 primer<223> P1 primer
<400> 8<400> 8
accaaacaga gaatccgtga g 21accaaacaga gaatccgtga g 21
<210> 9<210> 9
<211> 22<211> 22
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P2 primer<223> P2 primer
<400> 9<400> 9
agatgagggg gttcgtttgt ag 22agatgagggg gttcgtttgt ag 22
<210> 10<210> 10
<211> 18<211> 18
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P4 primer<223> P4 primer
<400> 10<400> 10
cgcgccgtcg cagtgacc 18cgcgccgtcg cagtgacc 18
<210> 11<210> 11
<211> 18<211> 18
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P6 primer<223> P6 primer
<400> 11<400> 11
cgtttcccac cgaaccgc 18cgtttcccac cgaaccgc 18
<210> 12<210> 12
<211> 20<211> 20
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P10 primer<223> P10 primer
<400> 12<400> 12
accgacccca acacagttcc 20accgacccca acacagttcc 20
<210> 13<210> 13
<211> 19<211> 19
<212> DNA<212> DNA
<213> Artificial Sequence<213> Artificial Sequence
<220><220>
<223> P12 primer<223> P12 primer
<400> 13<400> 13
accaaacaaa gatttggtg 19

Figure WO-DOC-FIGURE-ro134
accaaacaaa gatttggtg 19

Figure WO-DOC-FIGURE-ro134

Claims (5)

  1. 하기의 단계를 포함하는 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자 서열이 삽입된 재조합 벡터의 제조방법으로서, A method for preparing a recombinant vector in which the full-length gene sequence of the Newcastle disease virus KU001 strain (Accession No .: KCTC18794P) is inserted, comprising the following steps:
    뉴캐슬병 바이러스로부터 추출된 RNA를 이용하여 cDNA를 합성하는 단계; Synthesizing cDNA using RNA extracted from Newcastle disease virus;
    NP 단백질을 코딩하는 염기서열, P 단백질을 코딩하는 염기서열, M 단백질을 코딩하는 염기서열, F 단백질을 코딩하는 염기서열, HN 단백질을 코딩하는 염기서열 및 L 단백질을 코딩하는 염기서열을 순차적으로 플라스미드에 삽입하는 단계;The nucleotide sequence encoding the NP protein, the base sequence encoding the P protein, the base sequence encoding the M protein, the base sequence encoding the F protein, the base sequence encoding the HN protein, and the base sequence encoding the L protein are sequentially Inserting into the plasmid;
    를 포함하고,Including,
    상기 재조합 벡터는 서열번호 1의 염기서열로 이루어지는 것인, 재조합 벡터의 제조방법.The recombinant vector is made of the nucleotide sequence of SEQ ID NO: 1, the method of producing a recombinant vector.
  2. 제1항에 있어서,According to claim 1,
    상기 뉴캐슬병 바이러스 KU001 주는 국내 야생 오리에서 분리된 것인, 재조합 벡터의 제조방법.The Newcastle disease virus KU001 strain is isolated from domestic wild ducks, a method for producing a recombinant vector.
  3. 제1항에 있어서, According to claim 1,
    상기 NP 단백질을 코딩하는 염기서열은 서열번호 2의 염기서열로 이루어지고, 상기 P 단백질을 코딩하는 염기서열은 서열번호 3의 염기서열로 이루어지고, 상기 M 단백질을 코딩하는 염기서열은 서열번호 4의 염기서열로 이루어지고, 상기 F 단백질을 코딩하는 염기서열은 서열번호 5의 염기서열로 이루어지고, 상기 HN 단백질을 코딩하는 염기서열은 서열번호 6의 염기서열로 이루어지고, 상기 L 단백질을 코딩하는 염기서열은 서열번호 7의 염기서열로 이루어지는, 재조합 벡터의 제조방법.The nucleotide sequence encoding the NP protein consists of the nucleotide sequence of SEQ ID NO: 2, the nucleotide sequence encoding the P protein consists of the nucleotide sequence of SEQ ID NO: 3, and the nucleotide sequence encoding the M protein is SEQ ID NO: 4 Consisting of the nucleotide sequence of, the nucleotide sequence encoding the F protein consists of the nucleotide sequence of SEQ ID NO: 5, the nucleotide sequence encoding the HN protein consists of the nucleotide sequence of SEQ ID NO: 6, encoding the L protein The nucleotide sequence to be made of a nucleotide sequence of SEQ ID NO: 7, a method of producing a recombinant vector.
  4. 뉴캐슬병 바이러스 KU001 주(수탁번호: KCTC18794P)의 전장 유전자 서열이 삽입되고, 서열번호 1의 염기서열로 이루어지는, 재조합 벡터.A recombinant vector comprising the full-length gene sequence of Newcastle disease virus KU001 strain (Accession No .: KCTC18794P) and consisting of the nucleotide sequence of SEQ ID NO: 1.
  5. 제4항에 있어서,The method of claim 4,
    상기 재조합 벡터는 플라스미드 벡터인, 재조합 벡터.The recombinant vector is a plasmid vector, a recombinant vector.
PCT/KR2019/014818 2018-11-05 2019-11-04 Recombination vector based on newcastle disease virus isolated from domestic wild ducks, and method for producing same WO2020096301A1 (en)

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KR20080028277A (en) * 2007-08-27 2008-03-31 주식회사 고려비엔피 Attenuated recombinant newcastle disease virus and vaccine containing the same
KR20090007706A (en) * 2006-03-15 2009-01-20 인터벳 인터내셔널 비.브이. Recombinant newcastle disease virus expressing h5 hemagglutinin of avian influenza virus
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KR20080028277A (en) * 2007-08-27 2008-03-31 주식회사 고려비엔피 Attenuated recombinant newcastle disease virus and vaccine containing the same
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