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US7282507B2 - Indole derivatives as selective androgen receptor modulators (SARMS) - Google Patents

Indole derivatives as selective androgen receptor modulators (SARMS) Download PDF

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US7282507B2
US7282507B2 US11/096,664 US9666405A US7282507B2 US 7282507 B2 US7282507 B2 US 7282507B2 US 9666405 A US9666405 A US 9666405A US 7282507 B2 US7282507 B2 US 7282507B2
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methyl
lower alkyl
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nitro
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US20050245485A1 (en
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James C. Lanter
Zhihua Sui
James J. Fiordeliso
Weiqin Jiang
Xuqing Zhang
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Janssen Pharmaceutica NV
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Janssen Pharmaceutica NV
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Priority to US11/096,664 priority Critical patent/US7282507B2/en
Priority to TW094113779A priority patent/TW200606146A/en
Priority to MYPI20051938A priority patent/MY142850A/en
Priority to ARP050101746A priority patent/AR048643A1/en
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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D209/00—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/02—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom condensed with one carbocyclic ring
    • C07D209/04—Indoles; Hydrogenated indoles
    • C07D209/10—Indoles; Hydrogenated indoles with substituted hydrocarbon radicals attached to carbon atoms of the hetero ring
    • C07D209/12—Radicals substituted by oxygen atoms
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P13/00—Drugs for disorders of the urinary system
    • A61P13/08—Drugs for disorders of the urinary system of the prostate
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P15/00—Drugs for genital or sexual disorders; Contraceptives
    • A61P15/16—Masculine contraceptives
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P17/00—Drugs for dermatological disorders
    • A61P17/10—Anti-acne agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P17/00—Drugs for dermatological disorders
    • A61P17/14—Drugs for dermatological disorders for baldness or alopecia
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12—Antivirals
    • A61P31/14—Antivirals for RNA viruses
    • A61P31/18—Antivirals for RNA viruses for HIV
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00—Antineoplastic agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P5/00—Drugs for disorders of the endocrine system
    • A61P5/24—Drugs for disorders of the endocrine system of the sex hormones
    • A61P5/26—Androgens
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P5/00—Drugs for disorders of the endocrine system
    • A61P5/24—Drugs for disorders of the endocrine system of the sex hormones
    • A61P5/28—Antiandrogens
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P7/00—Drugs for disorders of the blood or the extracellular fluid
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
    • C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
    • C07D401/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring-member bond
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D409/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
    • C07D409/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings
    • C07D409/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring-member bond

Definitions

  • the present invention is directed to novel indole derivatives, pharmaceutical compositions containing them and their use in the treatment of disorders and conditions modulated by the androgen receptor. More particularly, the compounds of the present invention are useful in the treatment of prostate carcinoma, benign prostatic hyperplasia (BPH), hirsutism, alopecia, anorexia nervosa, breast cancer, acne, AIDS, cachexia, as a male contraceptive, and/or as a male performance enhancer.
  • BPH benign prostatic hyperplasia
  • hirsutism hirsutism
  • alopecia anorexia nervosa
  • breast cancer acne
  • AIDS cachexia
  • cachexia cachexia
  • Androgens are the anabolic steroid hormones of animals, controlling muscle and skeletal mass, the maturation of the reproductive system, the development of secondary sexual characteristics and the maintenance of fertility in the male.
  • testosterone is converted to estrogen in most target tissues, but androgens themselves may play a role in normal female physiology, for example, in the brain.
  • the chief androgen found in serum is testosterone, and this is the effective compound in tissues such as the testes and pituitary.
  • testosterone is converted to dihydrotestosterone (DHT) by the action of 5 ⁇ -reductase.
  • DHT dihydrotestosterone
  • androgens Like all steroid hormones, androgens bind to a specific receptor inside the cells of target tissues, in this case the androgen receptor. This is a member of the nuclear receptor transcription factor family. Binding of androgen to the receptor activates it and causes it to bind to DNA binding sites adjacent to target genes. From there it interacts with coactivator proteins and basic transcription factors to regulate the expression of the gene. Thus, via its receptor, androgens cause changes in gene expression in cells. These changes ultimately have consequences on the metabolic output, differentiation or proliferation of the cell that are visible in the physiology of the target tissue.
  • Non-steroidal agonists and antagonists of the androgen receptor are useful in the treatment of a variety of disorders and diseases. More particularly, agonists of the androgen receptor could be employed in the treatment of prostate cancer, benign prostatic hyperplasia, hirsutism in women, alopecia, anorexia nervosa, breast cancer and acne. Antagonists of the androgen receptor could be employed in male contraception, male performance enhancement, as well as in the treatment of cancer, AIDS, cachexia, and other disorders.
  • the present invention is directed to a compound of formula (I)
  • X is selected from the group consisting of O, S and NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —SO 2 -phenyl, —SO 2 -tolyl, —(CH 2 )-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • each Z is independently selected from the group consisting of —S(O) 0-2 —, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
  • each R 6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
  • cycloalkyl, aryl or heteroaryl group whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • R 6 is other than lower alkenyl
  • R 2 is methyl, than R 3 is other than methyl
  • R 1 is hydrogen or lower alkyl
  • b is 1, c is 0,
  • R 4 is hydrogen
  • R 7 is hydrogen
  • a is 0 (R 5 is absent) and R 2 is CF 3 , then R 3 is other than CF 3 ;
  • R 1 is hydrogen or lower alkyl
  • R 4 is hydrogen or methyl
  • b is 0, c is 0,
  • R 7 is hydrogen
  • a is 0 (R 5 is absent) and R 2 is hydrogen or methyl
  • R 3 is other than —(CH 2 ) 1-2 —N(R A )-(lower alkyl) or —(CH 2 ) 3 —N(R A )-(benzyl);
  • R 4 is hydrogen, b is 1, c is 0, R 7 is hydrogen, a is 0 (R 5 is absent) and R 2 is hydrogen, then R 3 is other than —(CH 2 )—NH-(lower alkyl);
  • R 4 is hydrogen, a is 0 (R 5 is absent), R 7 is hydrogen, b is 0, c is 0 and R 2 is CF 3 , then R 3 is other than —CH 2 —O—C(O)—CH 3 ;
  • R 4 is hydrogen, a is 0 (R 5 is absent), R 7 is hydrogen, b is 1, c is 1 and R 2 is hydrogen, then R 3 is other than —CH 2 —O—C(O)—CH 3 ;
  • R 1 is hydrogen or methyl
  • R 4 is hydrogen or methyl
  • b is 0, c is 0, a is 0 (R 5 is absent)
  • R 7 is hydrogen and R 2 is hydrogen
  • R 3 is other than —CH 2 —O-lower alkyl or —CH 2 —O-benzyl
  • R 4 when X is O, R 4 is hydrogen, b is 0, c is 0, R 7 is hydrogen and R 2 is hydrogen, then R 3 is other than CH2—O-phenyl, wherein the phenyl is optionally substituted with one to two substituents independently selected from lower alkyl, hydroxy substituted lower alkyl, carboxy and —C(O)-(lower alkoxy);
  • the present invention is further directed to a compound of formula (II)
  • X is selected from the group consisting of O, S and NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —SO 2 -phenyl, —SO 2 -tolyl, —(CH 2 )-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • a four to seven membered, saturated or partially unsaturated ring structure i.e. not an aromatic ring, containing one to two heteroatoms selected from O, N or S; wherein the four to seven membered, saturated or partially unsaturated ring structure is optionally substituted with a substituent selected from -(L 1 ) 0-1 —R 8 ;
  • L 1 is selected from the group consisting of —(CH 2 ) 1-4 —, —C(O)—, —C(O)—(CH 2 ) 1-4 —, —C(O)O— and —C(O)O—(CH 2 ) 1-4 ;
  • R 8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • piperidinyl is other than piperidinyl, wherein the piperidinyl is optionally substituted with lower alkyl or aralkyl;
  • the present invention is further directed to a compound of formula (III)
  • Y is NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —SO 2 -phenyl, —SO 2 -tolyl, —(CH 2 )-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • each Z is independently selected from the group consisting of —S(O) 0-2 —, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
  • each R 6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
  • cycloalkyl, aryl or heteroaryl group whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • R 6 is other than lower alkenyl
  • Illustrative of the invention is a pharmaceutical composition comprising a pharmaceutically acceptable carrier and any of the compounds described herein.
  • An illustration of the invention is a pharmaceutical composition made by mixing any of the compounds described herein and a pharmaceutically acceptable carrier.
  • Illustrating the invention is a process for making a pharmaceutical composition comprising mixing any of the compounds described herein and a pharmaceutically acceptable carrier.
  • Exemplifying the invention are methods of treating disorders and conditions modulated by the androgen receptor in a subject in need thereof comprising administering to the subject a therapeutically effective amount of any of the compounds or pharmaceutical compositions described herein.
  • An example of the invention is a method for treating an androgen receptor modulated disorder selected from the group consisting of prostate carcinoma, benign prostatic hyperplasia, hirsutism, or for male contraception, in a subject in need thereof comprising administering to the subject an effective amount of any of the compounds or pharmaceutical compositions described herein.
  • Another example of the invention is the use of any of the compounds described herein in the preparation of a medicament for treating: (a) prostate carcinoma, (b) benign prostatic hyperplasia, (c) hirsutism, (d) alopecia, (e) anorexia nervosa, (f) breast cancer, (g) acne, (h) AIDS, (i) cachexia, for (j) male contraception, or for (k) male performance enhancement, in a subject in need thereof.
  • the present invention is directed to compounds of formula (I), compounds of formula (II) and compounds of formula (III)
  • a, b, c, X, Y, R 2 , R 3 , R 4 , R 5 and R 7 are as herein defined, useful as selective androgen receptor modulators for the treatment of prostate carcinoma, benign prostatic hyperplasia (BPH), hirsitutism, alopecia, anorexia nervosa, breast cancer, acne, AIDS, cachexia, as a male contraceptive, and/or as a male performance enhancer.
  • BPH benign prostatic hyperplasia
  • hirsitutism hirsitutism
  • alopecia anorexia nervosa
  • breast cancer acne
  • AIDS cachexia
  • cachexia cachexia
  • the present invention is directed to compounds of formula (I) wherein
  • X is selected from the group consisting of O, S and NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —(CH 2 )-(fluorinated lower alkyl),-(lower alkyl)-CN,-(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • each Z is independently selected from the group consisting of —S(O) 0-2 —, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
  • each R 6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
  • cycloalkyl, aryl or heteroaryl group whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • the present invention is directed to compounds of formula (II) wherein
  • X is selected from the group consisting of O, S and NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —(CH 2 )-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • a four to seven membered saturated or partially unsaturated ring structure containing one to two heteroatoms selected from O, N or S; wherein the four to seven membered saturated or partially unsaturated ring structure is optionally substituted with a substituent selected from -(L 1 ) 0-1 —R 8 ;
  • L 1 is selected from the group consisting of —(CH 2 ) 1-4 —, —C(O)—, —C(O)—(CH 2 ) 1-4 —, —C(O)O— and —C(O)O—(CH 2 ) 1-4 ;
  • R 8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • the present invention is directed to compounds of formula (III) wherein
  • Y is NR 1 ;
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO 2 -(lower alkyl), —(CH 2 )-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O) 0-2 -(lower alkyl);
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 ;
  • a is an integer from 0 to 4.
  • R 5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(R A ) 2 , —S(O) 0-2 -(lower alkyl), —SO 2 —N(R A ) 2 , —N(R A )—C(O)-(lower alkyl), —N(R A )—C(O)-(halogen substituted lower alkyl) and aryl;
  • each R A is independently selected from hydrogen or lower alkyl
  • aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
  • b is an integer from 0 to 1;
  • c is an integer from 0 to 1;
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 ;
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH 2 ) 1-4 -Z-R 6 ;
  • each Z is independently selected from the group consisting of —S(O) 0-2 —, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
  • each R 6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
  • cycloalkyl, aryl or heteroaryl group whether alone or part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ;
  • R 2 is other than —(CH 2 ) 1-4 -Z-R 6 .
  • R 3 is selected from —(CH 2 ) 1-4 -Z-R 6 .
  • R 3 is —(CH 2 ) 1-4 —S(O) 0-2 —R 6 .
  • R 3 is selected from —(CH 2 ) 1-4 —NH—R 6 . or —(CH 2 ) 1-4 —N(lower alkyl)-R 6 .
  • R 3 is selected from —(CH 2 ) 1-4 —O—R 6 . or —(CH 2 ) 1-4 —O—C(O)—R 6 .
  • R 3 is —(CH 2 ) 1-4 —S(O) 0-2 —R 6 .
  • R 3 is selected from —(CH 2 ) 1-4 —NH—R 6 . or —(CH 2 ) 1-4 —N(lower alkyl)-R 6 .
  • R 3 is selected from —(CH 2 ) 1-4 —O—R 6 . or —(CH 2 ) 1-4 —O—C(O)—R 6 .
  • L 1 is selected from the group consisting of —(CH 2 ) 1-4 —, —C(O)— and —C(O)—(CH 2 ) 1-4 —.
  • R 8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 .
  • tetrahydro-thienyl is selected from the group consisting of tetrahydro-thienyl, tetrahydro-thiopyranyl and piperidinyl.
  • piperidinyl is piperidinyl, wherein the piperidinyl is optionally substituted with a group selected from aryl, aryl-cabronyl, aralkyl or aralkyl-carbonyl, and wherein the aryl or aralkyl substituent on the piperidinyl is optionally substituted with one or more, preferably one to two, more prepferably one, substituent selected from the group consisting of halogen, lower alkyl, lower alkoxy, trifluoromethyl, trifluoromethoxy and lower alkyl-sulfonyl.
  • piperidinyl is piperidinyl, wherein the piperidinyl is optionally substituted with a group selected from benzyl, fluoro-benzyl, chloro-benzyl, dichloro-benzyl, methyl-benzyl, methoxy-benzyl, trifluoromethyl-benzyl, t-butyl-benzyl, methylsulfonyl-benzyl, benzyloxy-carbonyl or chlorophenyl-carbonyl.
  • a group selected from benzyl, fluoro-benzyl, chloro-benzyl, dichloro-benzyl, methyl-benzyl, methoxy-benzyl, trifluoromethyl-benzyl, t-butyl-benzyl, methylsulfonyl-benzyl, benzyloxy-carbonyl or chlorophenyl-carbonyl.
  • a is an integer from 0 to 3.
  • a is an integer from 0 to 2. More preferably, a is an integer from 1 to 2.
  • b is 0 and c is 1. In another embodiment of the present invention b is 1 and c is 0. In yet another embodiment of the present invention b is 0 and c is 0.
  • X is O or NR 1 .
  • X is NR 1 .
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, -(lower alkyl)-CN, (lower alkyl)-O-(lower alkyl), (lower alkyl)-S(O) 0-2 -(lower alkyl), —SO 2 -(lower alkyl), —SO 2 -phenyl and —SO 2 -toyl.
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, -(lower alkyl)-CN, (lower alkyl)-O-(lower alkyl), (lower alkyl)-S(O) 0-2 -(lower alkyl) and —SO 2 -(lower alkyl).
  • R 1 is selected from the group consisting of hydrogen, lower alkyl, halogentated lower alkyl, lower alkyl-sulfonyl, lower alkoxy-lower alkyl, cyano-lower alkyl and lower alkyl-thio-lower alkyl.
  • R 1 is selected from the group consisting of hydrogen, methyl, ethyl, 2,2,2-trifluoroethyl, methyl-sulfonyl, methoxy-methyl, cyano-methyl and methyl-thio-methyl.
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH 2 )-Z-R 6 , wherein Z is selected from the group consisting of —S(O) 0-2 —, preferably Z is —S—.
  • R 2 is selected from the group consisting of hydrogen, methyl, ethyl, trifluoromethyl and —CH 2 —S-ethyl.
  • R 2 is selected from the group consisting of hydrogen and lower alkyl.
  • R 2 is selected from the group consisting of hydrogen and methyl. More preferably, R 2 is methyl.
  • R 2 is selected from the group consisting of hydrogen and trifluoromethyl.
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, —(CH 2 ) 0-2 -Z-R 6 .
  • R 3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —CH 2 —O-(4-cyanophenyl), —CH 2 —O-(3-nitrophenyl), —CH 2 -(3-trifluoromethyl-4-cyanophenyl), —S-methyl, —S-isopropyl, —S-cyclohexyl, —S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO 2 -(4-chlorophenyl), —SO 2 -(3,4-dichlorophenyl), —CH 2 —S-methyl, —CH 2 —S-ethyl, —CH 2 —S-butyl, —CH 2 —S-
  • R 3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —S-methyl, —S-isopropyl, —S-cyclohexyl, —S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO 2 -(4-chlorophenyl), —SO 2 -(3,4-dichlorophenyl), —CH 2 —S-methyl, —CH 2 —S-ethyl, —CH 2 —S-butyl, —CH 2 —S-propyl, —CH 2 —S-isopropyl, —CH 2 —S-isobutyl, —CH 2 —S-allyl, —CH 2 —S-phenyl,
  • R 3 is selected from the group consisting of —CH 2 —S(O) 0-2 —R 6 , wherein R 6 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, aryl, aralkyl, biphenyl, heteroaryl and heteroaryl alkyl); wherein the aryl or heteroaryl group, whether alone or as part of a substituent group is optionally substituted with one or more, preferably, one to three, substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O) 0-2 -(lower alkyl) and —SO 2 —N(R A ) 2 ; and wherein each R A is independently selected from hydrogen or lower alkyl.
  • R 3 is selected from the group consisting of —CH 2 —S(O) 0-2 -(lower alkyl), more preferably, R 3 is selected from the group consisting of —CH 2 —S-(lower alkyl) and —CH 2 —SO 2 -(lower alkyl).
  • Z is selected from the group consisting of —S(O) 0-2 —, —O— and —O—C(O)—. In another embodiment of the present invention Z is selected from the group consisting of —S(O) 0-2 — and —O—C(O)—. In another embodiment of the present invention Z is selected from the group consisting of —S—, —SO— and —SO 2 —, preferably Z is selected from the group consisting of —S— and —SO 2 —. In another embodiment of the present invention Z is selected from the group consisting of —NH— and —N(lower alkyl)-. In yet another embodiment of the present invention Z is selected from the group consisting of —O— and —O—C(O)—, preferably Z is —O—C(O)—.
  • R 6 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, cycloalkyl, aryl, aralkyl, biphenyl, heteroaryl and heteroaryl-(lower alkyl)-; wherein the aryl or heteroaryl, whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, cyano, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl halogen substituted lower alkyl, lower alkoxy or —S(O) 0-2 -(lower alkyl).
  • R 6 is selected from the group consisting of lower alkyl, lower alkenyl, halogen substituted lower alkyl, cycloalkyl, aryl, aralkyl, heteroaryl and -(lower alkyl)-heteroaryl; wherein the aryl or heteroaryl, whether alone or as part of a substituent group, is optionally substituted with one or more, preferably one to two, substituents independently selected from halogen, hydroxy, carboxy, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, trifluoromethyl or phenyl.
  • R 6 is selected from the group consisting of methyl, ethyl, propyl, isopropyl, butyl, isobutyl, allyl, cyclopentyl, cyclohexyl, phenyl, 2-chlorophenyl, 3-chlorophenyl, 4-chlorophenyl, 4-fluorophenyl, 4-methylphenyl, 4-methoxyphenyl, 4-carboxyphenyl, 4-hydroxyphenyl, 4-nitrophenyl, 4-aminophenyl, 4-dimethylamino-phenyl, 3,4-dichlorophenyl, 2,6-dichloro-phenyl 2-trifluoromethyl-phenyl, 2,2,2-trifluoroethyl, benzyl, 2-thienyl-methyl, 2-furyl-methyl, 2-pyridyl-methyl, 4-biphenyl, 2-pyridyl, 3-pyridyl and 5-chloro-6-benz
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, the lower alkenyl or the lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl) 3 .
  • R 4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl, cyano and —CC—Si(CH 3 ) 3 .
  • R 4 is selected from the group consisting of hydrogen, chloro, iodo, bromo, methyl, ethyl, —CH ⁇ CH 2 , —CCH, cyano and —CC—Si(CH 3 ) 3 .
  • R 5 is selected from the group consisting of halogen, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —NH—C(O)-(lower alkyl), —NH—C(O)-(trifluoromethyl) and phenyl; wherein the phenyl is optionally substituted with one or more, preferably, one to two substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, trifluoromethyl, lower alkoxy, trifluoromethoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino.
  • R 5 is selected from the group consisting of halogen, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, carboxy, lower-alkyl-carbonyl, lower alkoxy-carbonyl, halogenated lower alkyl, preferably fluorinated lower alkyl, —NHC(O)—CF 3 , phenyl and phenyl substituted with a halogen.
  • R 5 is selected from the group consisting of chloro, fluoro, bromo, cyano, nitro, amino, trifluoromethyl, —NHC(O)—CF 3 , methoxy-carbonyl and chloro-phenyl.
  • R 5 is selected from the group consisting of halogen lower alkyl, lower alkoxy, trifluoromethyl, cyano, nitro, amino, —NH—C(O)—CF 3 , —C(O)-lower alkoxy and phenyl substituted with halogen.
  • R 5 is selected from the group consisting of chloro, bromo, fluoro, iodo, methyl, trifluoromethyl, methoxy, cyano, nitro, amino, —NH—C(O)—CF 3 , methoxy-carbonyl- and 3-chlorophenyl.
  • R 7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl) 3 . In another embodiment of the present invention R 7 is selected from the group consisting of hydrogen, lower alkyl and Si(methyl) 3 . Preferably, R 7 is selected from the group consisting of hydrogen, methyl and trimethyl-silyl.
  • R 2 is other than methyl and R 3 is other than methyl.
  • R 2 is other than lower alkyl and R 3 is other than lower alkyl.
  • X is O.
  • X is NR 1 and R 1 is selected from the group consisting of hydrogen, (lower alkyl)-sulfonyl (preferably, methyl-sulfonyl), phenylsulfonyl, toylysulfonyl (preferably p-tolylsulfonyl), lower alkyl (preferably, methyl or ethyl), —CH 2 -(fluorinated lower alkyl) (preferably, 2,2,2-trifluoroethyl), cyano-(lower alkyl) (preferably, cyano-methyl), (lower alkyl)-O-(lower alkyl) (preferably, methoxy-methyl) and (lower alkyl)-S-(lower alkyl) (preferably, methyl-thio-methyl).
  • X is O.
  • X is NR 1 and R 1 is selected from the group consisting of hydrogen, (lower alkyl)-sulfonyl (preferably, methyl-sulfonyl), lower alkyl (preferably, methyl or ethyl), —CH 2 -(fluorinated lower alkyl) (preferably, 2,2,2-trifluoroethyl), cyano alkyl) (preferably, cyano-methyl), (lower alkyl)-O-(lower alkyl) (preferably, methoxy-methyl) and (lower alkyl)-S-(lower alkyl) (preferably, methyl-thio-methyl).
  • R 7 is hydrogen or lower alkyl (preferably methyl). In another embodiment of the present invention b and c are each 0.
  • R 4 is selected from the group consisting of hydrogen, halogen (preferably, chloro, bromo or iodo), cyano, lower alkyl (preferably, methyl or ethyl), lower alkenyl (preferably, —CH ⁇ CH 2 ), lower alkynyl (preferably, —CCH) and —CC—Si(CH 3 ) 3 .
  • R 4 is selected from the group consisting of hydrogen and lower alkyl, preferably, R 4 is hydrogen or methyl.
  • a is an integer from 0 to 3, preferably 1 to 3 and R 5 is selected from the group consisting of halogen (preferably, chloro, bromo or fluoro), nitro, amino, cyano, (lower alkoxy)-carbonyl (preferably, methoxy-carbonyl), trifluoromethyl, —NHC(O)—CF 3 and halogen substituted phenyl (preferably, chlorophenyl).
  • halogen preferably, chloro, bromo or fluoro
  • nitro, amino, cyano, (lower alkoxy)-carbonyl preferably, methoxy-carbonyl
  • trifluoromethyl —NHC(O)—CF 3
  • halogen substituted phenyl preferably, chlorophenyl
  • R 2 is selected from the group consisting of hydrogen, lower alkyl, trifluoromethyl and —(CH 2 )—S(O) 0-2 —R 6 , wherein R 6 is selected from lower alkyl (preferably, methyl or ethyl).
  • R 2 is selected from the group consisting of hydrogen, methyl, ethyl, trifluoromethyl and —CH 2 —S-ethyl.
  • R 2 is selected from the group consisting of hydrogen and lower alkyl.
  • R 2 is selected from the group consisting of hydrogen and methyl. More preferably, R 1 is methyl.
  • R 2 is selected from the group consisting of hydrogen and trifluoromethyl.
  • R 3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, —(CH 2 ) 0-2 -Z-R 6 ; wherein Z is selected from —S—, —SO—, —SO 2 — and —O—C(O)—; and wherein R 6 is selected from the group consisting of lower alkyl, lower akenyl, halogen substituted lower alkyl, cycloalkyl, aryl, aralkyl, heteroaryl and -(lower alkyl)-heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one to two substituents independently selected from halogen, hydroxy, carboxy, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, trifluoromethyl or phenyl.
  • R 3 is selected from the group consisting of lower alkyl (preferably, methyl), halogen substituted lower alkyl (preferably, chloromethyl or trifluoromethyl), —(CH 2 ) 0-2 —S(O) 0-2 —R 6 and —(CH 2 )—OC(O)—R 6 ; wherein R 6 is selected from the group consisting of lower alkyl (preferably, methyl, ethyl, propyl, isopropyl or butyl), halogen substituted alkyl (preferably, 2,2,2-trifluoroethyl), lower alkenyl, lower alkynyl, phenyl (optionally substituted with one to two substituents independently selected from halogen, hydroxy, carboxy, trifluoromethyl, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, phenyl, heteroaryl), aralkyl
  • R 3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —CH 2 —O-(3-nitrophenyl), —CH 2 —O-(4-cyanophenyl), —CH 2 —O-(3-trifluoromethyl-4-cyano-phenyl), —S-methyl, —S-isopropyl, —S-cyclohexyl, S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO 2 -(4-chlorophenyl), —SO 2 -(3,4-dichlorophenyl), —CH 2 —S-methyl, —CH 2 —S-ethyl, —CH 2 —S-butyl, —CH 2 —S-propy
  • R 3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —S-methyl, —S-isopropyl, —S-cyclohexyl, S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO 2 -(4-chlorophenyl), —SO 2 -(3,4-dichlorophenyl), —CH 2 —S-methyl, —CH 2 —S-ethyl, —CH 2 —S-butyl, —CH 2 —S-propyl, —CH 2 —S-isopropyl, —CH 2 —S-isobutyl, —CH 2 —S-allyl, —CH 2 —S-phenyl, —CH 2 —S-
  • a is 2 and R 5 is selected from the group consisting of halogen (preferably, chloro), nitro, cyano and trifluoromethyl.
  • b and c are each 0.
  • R 4 is hydrogen.
  • R 7 is hydrogen.
  • R 1 is selected from the group consisting of H and lower alkyl-sulfonyl (preferably, methyl-sulfonyl).
  • aralkyl wherein the aralkyl is optionally substuted with one to two substituents selected independently from the group consisting of halogen, lower alkyl, lower alkoxy, lower alkylsulfonyl and trifluoromethyl
  • aryl wherein the aryl is optionally substuted with one to two substituents selected independently from the group consisting of halogen, lower alkyl, lower alkoxy, lower alkylsulfonyl and trifluoromethyl
  • aralkyloxy-carbonyl wherein the aryl is optionally substuted with one to two substituents selected independently from the group consisting of halogen, lower alkyl, lower alkoxy, lower alkylsulfonyl and trifluoromethyl
  • tetrahydro-thien-3-yl is selected from the group consisting of tetrahydro-thien-3-yl, (S)-tetrahydro-thien-3-yl, (R)-tetrahydro-thien-3-yl, tetrahydro-thiopyran-4-yl, 4-(1-benzyloxy-carbonyl-piperidinyl), 4-(1-benzyl-piperidinyl), 4-piperidinyl, 4-(1-(4-chlorophenyl)-carbonyl-piperidinyl), 4-(1-(4-trifluoromethyl-benzyl)-piperidinyl), 4-(1-(4-methyl-benzyl)-piperidinyl), 4-(1-(4-fluoro-benzyl)-piperidinyl), 4-(1-(3-methoxy-benzyl)-piperidinyl), 4-(1-(4-chloro-benzyl)-
  • R 1 is hydrogen.
  • R 5 is selected from cyano or trifluoromethyl.
  • R 2 is lower alkyl (preferably, methyl).
  • R 3 is selected from the group consisting of halogenated lower alkyl and -(lower alkyl)-S(O) 0-2 —R 6 .
  • R 3 is selected from the group consisting of chloromethyl and —CH 2 —S—R 6 .
  • R 3 is selected from the group consisting of chloromethyl, —CH 2 —S-ethyl, —CH 2 —S-phenyl, —CH 2 —S-(4-chlorophenyl), —CH 2 —S-(4-fluorophenyl) and —CH 2 —S-cyclohexyl.
  • R 6 is selected from the group consisting of lower alkyl, cycloalkyl and aryl (wherein the aryl is optionally substituted with a halogen).
  • R 6 is selected from the group consisting of ethyl, cyclohexyl, phenyl, 4-chlorophenyl and 4-fluorophenyl.
  • R 1 is selected from hydrogen or methyl-sulfonyl
  • R 4 is selected from hydrogen, halogen, cyano, —CH ⁇ CH 2 , —CCH or —CC—Si(CH 3 ) 3 (preferably, R 4 is selected from hydrogen, halogen or cyano, more preferably, R 4 is hydrogen or halogen)
  • R 7 is hydrogen
  • R 2 and R 3 are each methyl
  • b is 0,
  • c is 0, a is an integer from 1 to 2
  • each R 5 is independently selected from halogen (preferably, bromo or chloro), cyano, nitro and trifluoromethyl and the R 5 groups are bound at the 5 and 6 positions.
  • a, b, c, X, Y, R 2 , R 3 , R 4 , R 5 and R 7 are independently selected to be any individual substituent or any subset of substituents selected from the complete list as defined herein.
  • the stereoconfiguration at the carbon atom bound to R 2 , R 3 and —(CH2) c —OR 7 i.e. the starred (*) carbon atom in the Tables below
  • the stereoconfiguration at the carbon atom bound to R 2 , R 3 and —(CH2) c —OR 7 is in the (+) configuration.
  • the stereoconfiguration at the carbon atom bound to R 2 , R 3 and —(CH2) c —OR 7 i.e. the starred (*) carbon atom in the Tables below
  • Representative compounds of the present invention are as listed in Tables 1, 2, 3, 4 and 5 below.
  • Tables 2, 3, 4 and 5 the column headed with the “*” symbol denotes the stereo-configuration of the tertiary carbon.
  • the “+” and “ ⁇ ” configurations are based on experimental determination. (The absolute configuration may or may not have been determined.)
  • a notation of “ ⁇ ” indicates a mixture of configurations.
  • a notation of “n/a” indicates that no stereo-center was present. Unless otherwise noted, for compounds listed below wherein R 2 contains an —SO— group, said chiral center was present as a mixture of configurations.
  • halogen shall mean chlorine, bromine, fluorine and iodine.
  • alkyl includes straight and branched chains.
  • alkyl radicals include methyl, ethyl, propyl, isopropyl, butyl, isobutyl, sec-butyl, t-butyl, pentyl and the like.
  • lower when used with alkyl means a carbon chain composition of 1-4 carbon atoms.
  • halogen substituted lower alkyl shall mean a lower alkyl group as defined above wherein one or more of the hydrogen atoms is replaced with a halogen atom. Suitable examples include, but are not limited to, trifluoromethyl, 2,2,2-trifluoro-eth-1-yl, chloromethyl, fluoromethyl and the like.
  • fluorinated lower alkyl shall mean a lower alkyl group as defined above wherein one or more of the hydrogen atoms is replaced with a fluorine atom. Suitable examples include, but are not limited to, fluoromethyl, fluoroethyl, trifluoromethyl, 2,2,2-trifluoro-eth-1-yl, and the like.
  • alkoxy shall denote an oxygen ether radical of the above described straight or branched chain alkyl groups. For example, methoxy, ethoxy, n-propoxy, sec-butoxy, t-butoxy, n-hexyloxy and the like.
  • cycloalkyl shall mean any stable four to eight membered monocyclic, saturated ring system, for example cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl and cyclooctyl.
  • aryl shall refer to unsubstituted carbocylic aromatic groups such as phenyl, naphthyl, and the like.
  • heteroaryl shall denote any five or six membered, monocyclic aromatic ring structure containing at least one heteroatom selected from the group consisting of O, N and S, optionally containing one to three additional heteroatoms independently selected from the group consisting of O, N and S; or a nine or ten membered, bicyclic aromatic ring structure containing at least one heteroatom selected from the group consisting of O, N and S, optionally containing one to four additional heteroatoms independently selected from the group consisting of O, N and S.
  • the heteroaryl group may be attached at any heteroatom or carbon atom of the ring such that the result is a stable structure.
  • heteroaryl groups include, but are not limited to, pyrrolyl, furyl, thienyl, oxazolyl, imidazolyl, purazolyl, isoxazolyl, isothiazolyl, triazolyl, thiadiazolyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, pyranyl, furazanyl, indolizinyl, indolyl, isoindolinyl, indazolyl, benzofuryl, benzothienyl, benzimidazolyl, benzthiazolyl, purinyl, quinolizinyl, quinolinyl, isoquinolinyl, isothiazolyl, cinnolinyl, phthalazinyl, quinazolinyl, quinoxalinyl, naphthyridinyl, pteridinyl, and the like.
  • substituents e.g., cycloalkyl, aryl, heteroaryl, etc
  • that group may have one or more substituents, preferably from one to five substituents, more preferably from one to three substituents, most preferably from one to two substituents, independently selected from the list of substituents.
  • a “phenyl-(C 1 -C 6 alkyl)-aminocarbonyl-(C 1 -C 6 alkyl)” substituent refers to a group of the formula
  • substituents on the core will be designated such that the X (or Y) atom is numbered 1 and the remaining ring atoms are numbered sequentially in a counterclockwise direction.
  • substituents on the core shall be designated as bound at the following positions of attachment:
  • subject refers to an animal, preferably a mammal, most preferably a human, who has been the object of treatment, observation or experiment.
  • terapéuticaally effective amount means that amount of active-compound or pharmaceutical agent that elicits the biological or medicinal response in a tissue system, animal or human that is being sought by a researcher, veterinarian, medical doctor or other clinician, which includes, but is not limited to, alleviation of the symptoms of the disease or disorder being treated.
  • composition is intended to encompass a product comprising the specified ingredients in the specified amounts, as well as any product which results, directly or indirectly, from combinations of the specified ingredients in the specified amounts.
  • the compounds according to this invention may accordingly exist as enantiomers. Where the compounds possess two or more chiral centers, they may additionally exist as diastereomers. It is to be understood that all such isomers and mixtures thereof are encompassed within the scope of the present invention. Furthermore, some of the crystalline forms for the compounds may exist as polymorphs and as such are intended to be included in the present invention. In addition, some of the compounds may form solvates with water (i.e., hydrates) or common organic solvents, and such solvates are also intended to be encompassed within the scope of this invention.
  • the processes for the preparation of the compounds according to the invention give rise to mixture of stereoisomers
  • these isomers may be separated by conventional techniques such as preparative chromatography.
  • the compounds may be prepared in racemic form, or individual enantiomers may be prepared either by enantiospecific synthesis or by resolution.
  • the compounds may, for example, be resolved into their component enantiomers by standard techniques, such as the formation of diastereomeric pairs by salt formation with an optically active acid, such as ( ⁇ )-di-p-toluoyl-D-tartaric acid and/or (+)-di-p-toluoyl-L-tartaric acid followed by fractional crystallization and regeneration of the free base.
  • the compounds may also be resolved by formation of diastereomeric esters or amides, followed by chromatographic separation and removal of the chiral auxiliary. Alternatively, the compounds may be resolved using a chiral HPLC column.
  • any of the processes for preparation of the compounds of the present invention it may be necessary and/or desirable to protect sensitive or reactive groups on any of the molecules concerned. This may be achieved by means of conventional protecting groups, such as those described in Protective Groups in Organic Chemistry , ed. J. F. W. McOmie, Plenum Press, 1973; and T. W. Greene & P. G. M. Wuts, Protective Groups in Organic Synthesis , John Wiley & Sons, 1991.
  • the protecting groups may be removed at a convenient subsequent stage using methods known from the art.
  • the present invention includes within its scope prodrugs of the compounds of this invention.
  • prodrugs will be functional derivatives of the compounds which are readily convertible in vivo into the required compound.
  • the term “administering” shall encompass the treatment of the various disorders described with the compound specifically disclosed or with a compound which may not be specifically disclosed, but which converts to the specified compound in vivo after administration to the patient.
  • Conventional procedures for the selection and preparation of suitable prodrug derivatives are described, for example, in Design of Prodrugs , ed. H. Bundgaard, Elsevier, 1985.
  • the salts of the compounds of this invention refer to “pharmaceutically acceptable salts.”
  • Other salts may, however, be useful in the preparation of compounds according to this invention or of their pharmaceutically acceptable salts.
  • Suitable pharmaceutically acceptable salts of the compounds include acid addition salts which may, for example, be formed by mixing a solution of the compound with a solution of a pharmaceutically acceptable acid such as hydrochloric acid, sulfuric acid, fumaric acid, maleic acid, succinic acid, acetic acid, benzoic acid, citric acid, tartaric acid, carbonic acid or phosphoric acid.
  • suitable pharmaceutically acceptable salts thereof may include alkali metal salts, e.g., sodium or potassium salts; alkaline earth metal salts, e.g., calcium or magnesium salts; and salts formed with suitable organic ligands, e.g., quaternary ammonium salts.
  • alkali metal salts e.g., sodium or potassium salts
  • alkaline earth metal salts e.g., calcium or magnesium salts
  • suitable organic ligands e.g., quaternary ammonium salts.
  • Representative pharmaceutically acceptable salts include the following:
  • compositions and bases which may be used in the preparation of pharmaceutically acceptable salts include the following:
  • acids including acetic acid, 2,2-dichlorolactic acid, acylated amino acids, adipic acid, alginic acid, ascorbic acid, L-aspartic acid, benzenesulfonic acid, benzoic acid, 4-acetamidobenzoic acid, (+)-camphoric acid, camphorsulfonic acid, (+)-(1S)-camphor-10-sulfonic acid, capric acid, caproic acid, caprylic acid, cinnamic acid, citric acid, cyclamic acid, dodecylsulfuric acid, ethane-1,2-disulfonic acid, ethanesulfonic acid, 2-hydrocy-ethanesulfonic acid, formic acid, fumaric acid, galactaric acid, gentisic acid, glucoheptonic acid, D-gluconic acid, D-glucoronic acid, L-glutamic acid, ⁇ -oxo-glutaric acid, glycolic
  • bases including ammonia, L-arginine, benethamine, benzathine, calcium hydroxide, choline, deanol, diethanolamine, diethylamine, 2-(diethylamino)-ethanol, ethanolamine, ethylenediamine, N-methyl-glucamine, hydrabamine, 1H-imidazole, L-lysine, magnesium hydroxide, 4-(2-hydroxyethyl)-morpholine, piperazine, potassium hydroxide, 1-(2-hydroxyethyl)-pyrrolidine, secondary amine, sodium hydroxide, triethanolamine, tromethamine and zinc hydroxide.
  • the present invention further comprises pharmaceutical compositions containing one or more compounds of formula (I), compounds of formula (II) and/or compounds of formula (III) with a pharmaceutically acceptable carrier.
  • Pharmaceutical compositions containing one or more of the compounds of the invention described herein as the active ingredient can be prepared by intimately mixing the compound or compounds with a pharmaceutical carrier according to conventional pharmaceutical compounding techniques.
  • the carrier may take a wide variety of forms depending upon the desired route of administration (e.g., oral, parenteral).
  • suitable carriers and additives include water, glycols, oils, alcohols, flavoring agents, preservatives, stabilizers, coloring agents and the like;
  • suitable carriers and additives include starches, sugars, diluents, granulating agents, lubricants, binders, disintegrating agents and the like.
  • Solid oral preparations may also be coated with substances such as sugars or be enteric-coated so as to modulate major site of absorption.
  • the carrier will usually consist of sterile water and other ingredients may be added to increase solubility or preservation.
  • injectable suspensions or solutions may also be prepared utilizing aqueous carriers along with appropriate additives.
  • compositions of this invention one or more compounds of the present invention as the active ingredient is intimately admixed with a pharmaceutical carrier according to conventional pharmaceutical compounding techniques, which carrier may take a wide variety of forms depending of the form of preparation desired for administration, e.g., oral or parenteral such as intramuscular.
  • a pharmaceutical carrier may take a wide variety of forms depending of the form of preparation desired for administration, e.g., oral or parenteral such as intramuscular.
  • any of the usual pharmaceutical media may be employed.
  • suitable carriers and additives include water, glycols, oils, alcohols, flavoring agents, preservatives, coloring agents and the like;
  • suitable carriers and additives include starches, sugars, diluents, granulating agents, lubricants, binders, disintegrating agents and the like. Because of their ease in administration, tablets and capsules represent the most advantageous oral dosage unit form, in which case solid pharmaceutical carriers are obviously employed. If desired, tablets may be sugar coated or enteric coated by standard techniques.
  • the carrier will usually comprise sterile water, through other ingredients, for example, for purposes such as aiding solubility or for preservation, may be included.
  • injectable suspensions may also be prepared, in which case appropriate liquid carriers, suspending agents and the like may be employed.
  • the pharmaceutical compositions herein will contain, per dosage unit, e.g., tablet, capsule, powder, injection, teaspoonful and the like, an amount of the active ingredient necessary to deliver an effective dose as described above.
  • compositions herein will contain, per unit dosage unit, e.g., tablet, capsule, powder, injection, suppository, teaspoonful and the like, of from about 0.01-500 mg and may be given at a dosage of from about 0.05-500 mg/kg/day, preferably from about 0.05-10 mg/kg/day, more preferably from about 1.0-3.0 mg/kg/day.
  • the dosages may be varied depending upon the requirement of the patients, the severity of the condition being treated and the compound being employed. The use of either daily administration or post-periodic dosing may be employed.
  • compositions are in unit dosage forms from such as tablets, pills, capsules, powders, granules, sterile parenteral solutions or suspensions, metered aerosol or liquid sprays, drops, ampoules, autoinjector devices or suppositories; for oral parenteral, intranasal, sublingual or rectal administration, or for administration by inhalation or insufflation.
  • the composition may be presented in a form suitable for once-weekly or once-monthly administration; for example, an insoluble salt of the active compound, such as the decanoate salt, may be adapted to provide a depot preparation for intramuscular injection.
  • a pharmaceutical carrier e.g.
  • a solid preformulation composition containing a homogeneous mixture of a compound of the present invention, or a pharmaceutically acceptable salt thereof.
  • preformulation compositions as homogeneous, it is meant that the active ingredient is dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective dosage forms such as tablets, pills and capsules.
  • This solid preformulation composition is then subdivided into unit dosage forms of the type described above containing from 0.1 to about 500 mg of the active ingredient of the present invention.
  • the tablets or pills of the novel composition can be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action.
  • the tablet or pill can comprise an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former.
  • the two components can be separated by an enteric layer which serves to resist disintegration in the stomach and permits the inner component to pass intact into the duodenum or to be delayed in release.
  • enteric layers or coatings such materials including a number of polymeric acids with such materials as shellac, cetyl alcohol and cellulose acetate.
  • liquid forms in which the novel compositions of the present invention may be incorporated for administration orally or by injection include, aqueous solutions, suitably flavoured syrups, aqueous or oil suspensions, and flavoured emulsions with edible oils such as cottonseed oil, sesame oil, coconut oil or peanut oil, as well as elixirs and similar pharmaceutical vehicles.
  • Suitable dispersing or suspending agents for aqueous suspensions include synthetic and natural gums such as tragacanth, acacia, alginate, dextran, sodium carboxymethylcellulose, methylcellulose, polyvinyl-pyrrolidone or gelatin.
  • the method of treating disorders or conditions modulated by the androgen receptor described in the present invention may also be carried out using a pharmaceutical composition comprising any of the compounds as defined herein and a pharmaceutically acceptable carrier.
  • the pharmaceutical composition may contain between about 0.01 mg and 500 mg, preferably about 10 to 100 mg, of the compound, and may be constituted into any form suitable for the mode of administration selected.
  • Carriers include necessary and inert pharmaceutical excipients, including, but not limited to, binders, suspending agents, lubricants, flavorants, sweeteners, preservatives, dyes, and coatings.
  • compositions suitable for oral administration include solid forms, such as pills, tablets, caplets, capsules (each including immediate release, timed release and sustained release formulations), granules, and powders, and liquid forms, such as solutions, syrups, elixers, emulsions, and suspensions.
  • forms useful for parenteral administration include sterile solutions, emulsions and suspensions.
  • compounds of the present invention may be administered in a single daily dose, or the total daily dosage may be administered in divided doses of two, three or four times daily.
  • compounds for the present invention can be administered in intranasal form via topical use of suitable intranasal vehicles, or via transdermal skin patches well known to those of ordinary skill in that art.
  • the dosage administration will, of course, be continuous rather than intermittent throughout the dosage regimen.
  • the active drug component can be combined with an oral, non-toxic pharmaceutically acceptable inert carrier such as ethanol, glycerol, water and the like.
  • suitable binders include, without limitation, starch, gelatin, natural sugars such as glucose or beta-lactose, corn sweeteners, natural and synthetic gums such as acacia, tragacanth or sodium oleate, sodium stearate, magnesium stearate, sodium benzoate, sodium acetate, sodium chloride and the like.
  • Disintegrators include, without limitation, starch, methyl cellulose, agar, bentonite, xanthan gum and the like.
  • the liquid forms in suitably flavored suspending or dispersing agents such as the synthetic and natural gums, for example, tragacanth, acacia, methyl-cellulose and the like.
  • suspending or dispersing agents such as the synthetic and natural gums, for example, tragacanth, acacia, methyl-cellulose and the like.
  • sterile suspensions and solutions are desired.
  • Isotonic preparations which generally contain suitable preservatives are employed when intravenous administration is desired.
  • the compound of the present invention can also be administered in the form of liposome delivery systems, such as small unilamellar vesicles, large unilamellar vesicles, and multilamellar vesicles.
  • Liposomes can be formed from a variety of phospholipids, such as cholesterol, stearylamine or phophatidylcholines.
  • Compounds of the present invention may also be delivered by the use of monoclonal antibodies as individual carriers to which the compound molecules are coupled.
  • the compounds of the present invention may also be coupled with soluble polymers as targetable drug carriers.
  • Such polymers can include polyvinylpyrrolidone, pyran copolymer, polyhydroxypropylmethacrylamidephenol, polyhydroxy-ethylaspartamidephenol, or polyethyl eneoxidepolylysine substituted with palmitoyl residue.
  • the compounds of the present invention may be coupled to a class of biodegradable polymers useful in achieving controlled release of a drug, for example, polylactic acid, polyepsilon caprolactone, polyhydroxy butyeric acid, polyorthoesters, polyacetals, polydihydropyrans, polycyanoacrylates and cross-linked or amphipathic block copolymers of hydrogels.
  • a drug for example, polylactic acid, polyepsilon caprolactone, polyhydroxy butyeric acid, polyorthoesters, polyacetals, polydihydropyrans, polycyanoacrylates and cross-linked or amphipathic block copolymers of hydrogels.
  • Compounds of this invention may be administered in any of the foregoing compositions and according to dosage regimens established in the art whenever treatment of disorders or conditions modulated by the androgen receptor is required.
  • the daily dosage of the products may be varied over a wide range from 0.01 to 500 mg per adult human per day.
  • the compositions are preferably provided in the form of tablets containing, 0.01, 0.05, 0.1, 0.5, 1.0, 2.5, 5.0, 10.0, 15.0, 25.0, 50.0, 100, 150, 200, 250 and 500 milligrams of the active ingredient for the symptomatic adjustment of the dosage to the patient to be treated.
  • An effective amount of the drug is ordinarily supplied at a dosage level of from about 0.01 mg/kg to about 500 mg/kg of body weight per day.
  • the range is from about 0.5 to about 10.0 mg/kg of body weight per day, most preferably, from about 1.0 to about 3.0 mg/kg of body weight per day.
  • the compounds may be administered on a regimen of 1 to 4 times per day.
  • Optimal dosages to be administered may be readily determined by those skilled in the art, and will vary with the particular compound used, the mode of administration, the strength of the preparation, the mode of administration, and the advancement of the disease condition. In addition, factors associated with the particular patient being treated, including patient age, weight, diet and time of administration, will result in the need to adjust dosages.
  • a suitably substituted compound of formula (V) a known compound or compound prepared by known methods, is reacted with a source of iodine or bromine, such as NIS, ICI, NBS, Br 2 , I 2 and the like, in an organic solvent or mixture thereof, such as THF, methanol, acetic acid, THF/methanol, and the like, optionally in the presence of a catalyst, such as acetic acid (with ICI), toluene sulfonic acid (with NIS or NBS), and the like, to yield the corresponding compound of formula (VI), wherein Q is I or Br, respectively.
  • a source of iodine or bromine such as NIS, ICI, NBS, Br 2 , I 2 and the like
  • organic solvent or mixture thereof such as THF, methanol, acetic acid, THF/methanol, and the like
  • a catalyst such as acetic acid (with ICI), toluene sulfonic acid (with NIS
  • the compound of formula (VI) is reacted with mesyl chloride (or alternatively, with p-toluenesulfonyl chloride), in the presence of an organic base such as pyridine, potassium t-butoxide, and the like, in an organic solvent such as THF, pyridine, DMF, and the like, to yield the corresponding compound of formula (VII).
  • an organic base such as pyridine, potassium t-butoxide, and the like
  • organic solvent such as THF, pyridine, DMF, and the like
  • the compound of formula (VII) is reacted with a suitably substituted compound of formula (VII), a known compound or compound prepared by known methods, in the presence of a catalyst such as PdCl 2 (PPh 3 ) 2 , Pd 2 (dba) 3 , PdCl 2 (dppf), and the like, in the presence of CuI, in the presence of an organic base, preferably, in the presence of a tertiary amine base such as TEA, DIPEA, pyridine, and the like, in an organic solvent such as THF, DMF, DMAC, and the like, to yield the corresponding compound of formula (Ia).
  • a catalyst such as PdCl 2 (PPh 3 ) 2 , Pd 2 (dba) 3 , PdCl 2 (dppf), and the like
  • CuI in the presence of an organic base
  • a tertiary amine base such as TEA, DIPEA, pyridine, and the like
  • the compound of formula (Ia) is optionally de-protected according to known methods, for example, by reacting with a base such as NaOH, KOH, NaO(lower alkyl), and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF, and the like, to yield the corresponding compound of formula (Ib).
  • a base such as NaOH, KOH, NaO(lower alkyl), and the like
  • organic solvent or mixture thereof such as methanol/water, ethanol/water, THF, and the like
  • the compound of formula (Ia) is reacted with TBAF in an organic solvent such as THF, DMF, and the like, preferably at an elevated temperature of greater than or equal to about 50° C., to yield the corresponding compound of formula (Ib).
  • the compound of formula (IIa) may be further optionally de-protected according to known methods to yield the corresponding compound of formula (IIb) wherein R 1 is hydrogen.
  • the compound of formula (IIIa) may be further optionally de-protected according to known methods to yield the corresponding compound of formula (IIIb) wherein R 1 is hydrogen.
  • a suitably substituted compound of formula (VI) is reacted with a suitably substituted compound of formula (XIV), a known compound or compound prepared by known methods, in the presence of a catalyst such as palladium acetate, in the presence of a base such as potassium acetate, DABCO, and the like, at an elevated temperature, preferably, at an elevated temperature of greater than or equal to about 70° C., more preferably, at an elevated temeperature of about 80° C., to yield the corresponding compound of formula (Ic).
  • a catalyst such as palladium acetate
  • a base such as potassium acetate, DABCO, and the like
  • a suitably substituted compound of formula (Ib) is reacted with a source of iodine, bromine or chlorine such as NIS, NBS, NCS, and the like, in the presence of a base such as potassium t-butoxide, NaH, and the like, in an organic solvent such as THF, DMAC, NMP, and the like, to yield the corresponding compound of formula (Id), wherein J is I, Br or Cl, respectively.
  • a source of iodine, bromine or chlorine such as NIS, NBS, NCS, and the like
  • a base such as potassium t-butoxide, NaH, and the like
  • organic solvent such as THF, DMAC, NMP, and the like
  • the compound of formula (XVIII) is reacted with a reagent such as TBAF, K 2 CO 3 , NaO(lower alkyl), and the like, in an organic solvent such as THF, MeOH, EtOH, and the like, to yield the corresponding compound of formula (If).
  • a reagent such as TBAF, K 2 CO 3 , NaO(lower alkyl), and the like, in an organic solvent such as THF, MeOH, EtOH, and the like, to yield the corresponding compound of formula (If).
  • the compound of formula (If) may be further optionally reduced with a suitable reducing agent such as H 2 gas in the presence of a catalyst such as Pd on carbon, Pt on carbon, Lindlar's catalyst, and the like, in an organic solvent such as ethyl acetate, methanol, ethanol, and the like, to yield the corresponding compound of formula (I) wherein the alkynyl group is converted to the corresponding alkenyl (i.e. by selecting the reducing conditions to partially reduce the triple bond) or alkyl (i.e. by selecting the reducing conditions to fully reduce the triple bond).
  • a suitable reducing agent such as H 2 gas
  • a catalyst such as Pd on carbon, Pt on carbon, Lindlar's catalyst, and the like
  • organic solvent such as ethyl acetate, methanol, ethanol, and the like
  • the compound of formula (Id) is reacted with a suitably substituted compound of formula (XIX), a known compound or compound prepared by known methods, in the presence of a catalyst such as Pd(PPh 3 ) 4 , and the like, in the presence of an inorganic salt such as lithium chloride, and the like, to yield the corresponding compound of formula (Ig) (For example, see Tetrahedron, 58(51) 2002 pp. 10181-10188).
  • the compound of formula (Ig) may then be further, optionally reduced, as described above, to yield the corresponding compound wherein the lower alkenyl is converted to the corresponding lower alkyl (other than methyl).
  • a suitably substituted compound of formula (VII), wherein Q is I or Br is reacted with a suitably substituted compound of formula (XVIII), wherein G is a selected from the group consisting of H, Cl, OTBS and S—R 6 , a known compound or compound prepared by known methods, in the presence of a catalyst such as PdCl 2 (PPh 3 ) 2 , PdCl 2 (dppf), Pd 2 (dba), and the like, in the presence of CuI, in the presence of an organic base, preferably, a tertiary amine base such as TEA, DIPEA, pyridine, and the like, in an organc solvent such as THF, DMF, DMAC, and the like, to yield the corresponding compound of formula (Ih).
  • a catalyst such as PdCl 2 (PPh 3 ) 2 , PdCl 2 (dppf), Pd 2 (dba), and the like
  • CuI in the presence of an organic base,
  • the compound of formula (Ih) is optionally de-protected according to known methods to yield the corresponding compound of formula (Ij).
  • the compound of formula (Ih) may be reacted with with a base such as NaOH, KOH, and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF/water, and the like, to yield the corresponding compound of formula (Ij) wherein G is H or —S—R 6 , respectively.
  • the compound of formula (Ih) when G is OTBS, the compound of formula (Ih) may be reacted with a base such as NaOH, KOH, and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF/water, and the like, to yield the corresponding compound of formula (Ij) wherein the OTBS group (G) is converted to an —OH group.
  • a base such as NaOH, KOH, and the like
  • organic solvent or mixture thereof such as methanol/water, ethanol/water, THF/water, and the like
  • the compound of formula (Ij) G is S—R 6
  • the compound of formula (Ij) is further optionally reacted with an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound of formula (Ik).
  • an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like
  • the compound of formula (Ij) is further optionally reacted with a compound of formula (XIX), a known compound or compound prepared by known methods, wherein E is Cl, Br or I, preferably, in the presence of a base such as NaH, potassium t-butoxide, and the like, in an organic solvent such as THF, DMF, NMP, and the like, to yield the corresponding compound of formula (Im).
  • a compound of formula (XIX) a known compound or compound prepared by known methods, wherein E is Cl, Br or I, preferably, in the presence of a base such as NaH, potassium t-butoxide, and the like, in an organic solvent such as THF, DMF, NMP, and the like, to yield the corresponding compound of formula (Im).
  • the compound of formula (Im) may be further optionally reacted with an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound wherein the —S— of the —(CH 2 ) 1-4 —S—R 6 substituent group is oxidized to the corresponding —SO— or —SO 2 — group.
  • an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like
  • a suitably substituted compound of formula (Ih) wherein G is Cl is reacted with a suitably substituted compound of formula (XXI), a known compound or compound prepared by known methods, in the presence of a base such as NaOCH 3 , NaO(lower alkyl), TEA, and the like, in an organic solvent such as methanol, ethanol, THF, and the like, to yield the corresponding compound of formula (Ik).
  • a base such as NaOCH 3 , NaO(lower alkyl), TEA, and the like
  • organic solvent such as methanol, ethanol, THF, and the like
  • the compound of formula (Ik) is reacted with a suitably selected oxidizing agent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound of formula (Im).
  • a suitably selected oxidizing agent such as OXONE®/TBAHS, mCPBA, and the like
  • organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like
  • a suitably substituted compound of formula (XXII) (prepared as previously described in Scheme 5, de-protecting a compound of formula (Ih) wherein G is OTBS) is reacted with a suitably substituted acid chloride, a compound of formula (XXIII), a known compound or compound prepared by known methods, in the presence of an organic base, preferably, a tertiary amine base such a TEA, DIPEA, pyridine, and the like, in an organic solvent such as THF, DCM, acetonitrile, and the like, to yield the corresponding compound of formula (In).
  • an organic base preferably, a tertiary amine base such a TEA, DIPEA, pyridine, and the like
  • organic solvent such as THF, DCM, acetonitrile, and the like
  • G is OTBS, for the compound of formula (Ih).
  • a suitably substituted compound of formula (Ib) is reacted with a suitably substituted compound of formula (XXIV), wherein V is Br, Cl or I, a known compound or compound prepared by known methods, in the presence of a base such as potassium t-butoxide, sodium hydride, and the like, in an organic solvent such as THF, DMF, DMAC, and the like, to yield a mixture of the corresponding compounds of formula (Ip) and (Iq).
  • a base such as potassium t-butoxide, sodium hydride, and the like
  • a suitably substituted compound of formula (XXVI) a known compound or compound prepared by known methods, is reacted with iodine or a source or iodine, according to known methods (for example, J. Het. Chem., 15(2), 1978, pp 337-342), to yield the corresponding compound of formula (XXVII).
  • the compound of formula (XXVI) or the compound of formula (XXVII) is reacted according to known methods, to yield the corresponding compound of formula (XXVIII), wherein M is Li, Mg, Zn, Cu, and the like, and wherein the compound of formula (XXVIII) is preferably not isolated.
  • the compound of formula (XXVIII) is reacted with a suitably substituted compound of formula (XXIX), a known compound or compound prepared by known methods, according to known methods (for example, J. Med. Chem., 46(4), 2003, pp 532-541) to yield the corresponding compound of formula (Ir).
  • a suitably substituted compound of formula (XXX), a known compound or compound prepared by known methods is reacted with a compound of formula (XXXI), wherein W is Br, Cl or I, a known compound or compound prepared by known methods, in an anhydrous organic solvent such as THF, diethyl ether, and the like, to yield the corresponding compound of formula (IX).
  • a suitably substituted compound of formula (XXXIII), a known compound or compound prepared by known methods, is reacted with (CH 3 ) 3 SI, in the presence of a base such as sodium hydride, potassium hydride, and the like, in an organic solvent such as DMF, DMSO, and the like, to yield the corresponding compound of formula (XXXIV).
  • a base such as sodium hydride, potassium hydride, and the like
  • organic solvent such as DMF, DMSO, and the like
  • the compound of formula (XXXIV) is reacted with Li-CC-TMS, a known compound or compound prepared by known methods (for example by reacting HCC-TMS with butyl lithium), to yield a mixture of the compound of formula (XXXV) and (XXXVI).
  • the compound of formula (XXXV) and/or the compound of formula (XXXVI) (isolated or in a mixture) is reacted with a reagent such as TBAF, K 2 CO 3 , NaO(lower alkyl), and the like, in an organic solvent such as THF, methanol, ethanol, and the like, to yield the corresponding compound of formula (XIIa) and/or the corresponding compound of formula (XIa) (isolated or in a mixture), respectively.
  • a reagent such as TBAF, K 2 CO 3 , NaO(lower alkyl), and the like
  • a suitably substituted sulfide is dissolved in a 1:1 mixture of dichloromethane and water and stirred rapidly.
  • a catalytic amount of tetrabutylammonium hydrogensulfate is employed as a phase-transfer catalyst (PTC), added to the solution in an amount between about 1% and about 20%.
  • PTC phase-transfer catalyst
  • OXONE® 3 equivalents of OXONE® are added and the solution is stirred overnight at room temperature.
  • the layers are separated and the aqueous layer is extracted with dichloromethane.
  • the combined organic layers are washed with water and/or 10% sodium thiosulfate solution, then brine, dried over magnesium sulfate, filtered, and evaporated to yield a residue which is purified by column chromatography.
  • a suitably substituted protected indole derivative or intermediate is dissolved in methanol and about 1 to about 4 equivalents of sodium hydroxide solution (1 to 4 M) or lithium hydroxide dissolved in a minimal amount of water.
  • the reaction mixture is stirred at temperature in the range of between about 0° C. to about 50° C., the reaction is allowed to proceed for about 0.5 hour to about overnight, and then the reaction mixture is concentrated under vacuum. Water is added to the residue and the solution is acidified with 1N hydrochloric acid solution.
  • the aqueous solution is extracted twice with diethyl ether and the diethyl ether extracts are dried over magnesium sulfate, filtered, and concentrated under vacuum to yield a residue.
  • the residue is purified by column chromatography.
  • R 0 substituted protected aniline (wherein R 0 is a lower alkyl such as methyl, phenyl or tolyl) is added to a round-bottom flask along with about 5 to about 10 mole % of bis(triphenylphosphine)palladium(II) chloride and about 10 to about 25 mole % of copper iodide.
  • the flask is fitted with a septum attached to an argon, nitrogen or alternative inert gas inlet.
  • the solvent —tetrahydrofuran or dimethylformamide—is added via syringe followed by about 1.5 to about 2 equivalents of triethylamine or diethylamine.
  • the solution is stirred for about 1 to about 30 minutes and a suitably substituted alkyne is added either neat or in a small amount of the solvent used in the reaction.
  • the reaction is allowed to proceed for about 3 to about 24 hours.
  • the solution is evaporated and the residue is purified by column chromatography.
  • a 0.5 M solution of ethynylmagnesium bromide is cooled down in an ice bath under an argon atmosphere.
  • a suitably substituted ketone is added in portions slowly via syringe and the reaction is allowed to proceed overnight.
  • a solution of saturated ammonium chloride is added to the reaction and extracted twice with ethyl ether.
  • the ethyl ether extracts are dried over magnesium sulfate, filtered, and evaporated to yield an oil.
  • the oil is purified using a Kugelrohr or by column chromatography.
  • a suitably substituted aniline or derivative is dissolved in pyridine. About 5 equivalents of methanesulfonyl chloride is added and the solution is stirred overnight at room temperature. The solution is evaporated under vacuum and ethyl acetate is added to the residue and then decanted. This is done multiple times. The washes are combined and then washed with water, 1N hydrochloric acid solution, water and brine, then dried over magnesium sulfate, filtered and evaporated to yield a solid.
  • a solution of a suitably substituted bismethanesulfonate derivative in methanol is heated to about 50° C. in a water bath. Lithium hydroxide or sodium hydroxide (about 1.5 equivalents) in a minimal amount of water is added. The solution is stirred for about two hours at about 50° C. then allowed to proceed overnight at about room temperature. The solvent is removed under vacuum and water is added. The solution is acidified with 1N hydrochloric acid solution and a solid precipitates out. The solid is filtered off and washed with water and pentane. The solid is then taken up in ethyl acetate or diethyl ether and the organic solution is washed with water, dried over magnesium sulfate, filtered, evaporated to yield a solid.
  • a suitably substituted iodoaniline or derivative is dissolved in THF and cooled in an ice bath under argon.
  • Potassium t-butoxide (1.0M in THF) (about 3.2 equivalents) is added dropwise via syringe in portions over about one-half hour.
  • the solution is stirred for about one-half hour and about 1.6 equivalents of methanesulfonyl chloride are added all at once.
  • the reaction is allowed to go overnight.
  • Water and 1N hydrochloric acid are added to the solution and then extracted twice with diethyl ether.
  • the diethyl ether extracts are washed with water and brine, then dried over magnesium sulfate, filtered, and evaporated to yield a residue which is purified by column chromatography as necessary.
  • a suitably substituted aniline or derivative is dissolved in a 1:1 mixture of THF and methanol. About 1.1 equivalents of N-iodosuccinimide are then added, followed by addition of about 5 mol % of p-toluenesulfonic acid monohydrate. The solution is stirred overnight, then concentrated and diethyl ether is added. The solution is washed with water twice to remove succinimide, then washed with brine, dried over magnesium sulfate, filtered, evaporated to yield a solid which is triturated with pentane or hexanes to remove iodine. The solid is then again filtered and washed with pentane or hexanes and dried.
  • a suitably substituted alkyl chloride is dissolved in methanol.
  • the anion of the substituted arylthio is prepared by dissolving the thiol in about an equimolar amount of 0.5M sodium methoxide in methanol.
  • the thiolate solution (about 2 equivalents) is added to the alkyl chloride in methanol and stirred overnight.
  • the solution is concentrated and 1N HCl is added, followed by extraction twice with ethyl ether.
  • the ether extracts are dried over magnesium sulfate, filtered, and evaporated to yield a residue.
  • the residue is purified by column chromatography.
  • synthesis products may be listed as having been isolated as a residue. It will be understood by one of ordinary skill in the art that the term “residue” does not limit the physical state in which the product was isolated and may include, for example, a solid, an oil, a foam, a gum, a syrup, and the like.
  • the combined extracts were washed with brine, dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil.
  • the crude material (oil) was purified by column chromatography three times.
  • the solvent systems used in the purification were of the following order: 5% diethyl ether in dichloromethane, 1% diethyl ether in dichloromethane, and 60% diethyl ether in pentane.
  • the first product that came off was the tertiary sulfide of the title compound as a byproduct.
  • the second product collected from the column was the title compound, a yellow solid.
  • N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide 4.3 g, 10.48 mmol
  • bis(triphenylphosphine)palladium (II) chloride 4.3 g, 10.48 mmol
  • copper (I) iodide 0.40 g, 2.096 mmol
  • the solids were dissolved in tetrahydrofuran (100 ml) and triethylamine (2.2 mL, 15.72 mmol).
  • the reaction mixture was then evacuated using an adapter fitted to the flask connected to a manifold with vacuum and nitrogen lines. Argon was bubbled into the solution.
  • 5-Amino-2-nitrobenzotrifluoride (16.25 g, 78.8 mmol) was dissolved in tetrahydrofuran (100 mL) and methanol (100 mL) and to this solution was added p-toluenesulfonic acid (0.18 g, 0.95 mmol) and N-iodosuccinimide (17.8 g, 78.8 mmol). The solution was stirred all day. N-iodosuccinimide (0.78 g, 3.47 mmol) and p-toluenesulfonic acid (0.2 g, 1.05 mmol) were then added and the solution stirred overnight at room temperature under nitrogen.
  • the solution was concentrated under vacuum to a small volume. Water (200 mL) was added to the reaction mixture and and a brown solid precipitated out. The solid was filtered and washed with water, then dissolved in ethyl acetate (100 mL) and diethyl ether (60 mL). The organic solution was washed with 10% sodium thiosulfate solution (50 mL). This created an emulsion which was alleviated by adding diethyl ether and water and filtering undissolved material. The layers were separated and the organic layer was washed with 10% sodium thiosulfate solution (50 mL), water was then added to the aqueous layer and the layers separated. The organic layer was washed with brine (50 mL), dried over magnesium sulfate, filtered, and evaporated to yield the title compound as a brown solid that was dried under vacuum.
  • the diethyl ether extracts were washed with water, then brine, dried over magnesium sulfate, filtered, and evaporated to yield a residue.
  • the residue was purified by column chromatography eluting with 30, 50, and 57% diethyl ether in pentane. Some mixed fractions with product were evaporated down and triturated with diethyl ether to yield the title product as a white solid which was filtered off.
  • This compound was prepared using the general Sonagashira conditions as described in general Example C, starting from N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (9.0 g, 21.9 mmol) and 2-methyl-1-buten-3-yne (6.25 mL, 65.7 mmol) to yield the title compound as a reddish-brown solid.
  • the diethyl ether extracts were washed with 1N HCl solution, water and brine, dried over magnesium sulfate, filtered, and evaporated to yield crude product.
  • the crude material was purified by column chromatography eluting with 30 and 50% diethyl ether/pentane to yield the title compound as a solid.
  • This compound was prepared using the general Sonagashira procedure as described in General Example C, from N-(2-iodo-phenyl)-methanesulfonamide (1.65 g, 5.55 mmol) and 1-chloro-2-methyl-but-3-yn-2-ol (0.79 g, 6.66 mmol) to yield a brown oil.
  • This compound was prepared using the general pyridine method, step 2 as described in General Procedures Example F, starting from N-(2-iodo-phenyl)-bismethanesulfonamide (19.27 g, 51.36 mmol) to yield the title compound as a browm solid.
  • This compound was prepared using the general pyridine method, step 1, as described in the General Procedure Example E, starting from 2-iodoaniline (20 g, 91.31 mmol) to yield the title compound as a brown solid.
  • This compound was prepared using the general de-protection procedure as described in the General Procedure Example B.
  • the starting material used was 1-ethylsulfanyl-2-(5-fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (0.8 g, 2.0 mmol) and the base used was 4M sodium hydroxide (1 mL, 4.0 mmol). The product was obtained as a solid.
  • This compound was prepared using the general Sonagashira procedure as described in the General Procedures Example C.
  • the starting material was N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.77 g, 2.0 mmol) and 1-ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.29 g, 2.0 mmol), reacted to yield the title compound as a golden oil.
  • This compound was prepared using the general pyridine method, step 2 as described in the General Procedure Example F.
  • the starting material was N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-bismethanesulfonamide (8.2 g, 17.8 mmol) which was reacted to yield the title compound as an orange solid.
  • This compound was prepared using the general pyridine procedure, step 1 as described in the General Procedure Example E.
  • the starting material used was 4-fluoro-2-iodo-5-trifluoromethyl-phenylamine (5.6 g, 18.36 mmol), which was reacted to yield the title compound as a solid.
  • This compound was prepared using the standard iodination procedure, as described in General Procedures Example H, to yield the title compound as a reddish-brown oil.
  • This compound was prepared using the general de-protection procedure, as described in General Procedures Example.
  • the starting material used was 2-(2-ethylsulfanyl-1-methoxy-1-methyl-ethyl)-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole (0.17 g, 0.39 mmol).
  • the base used was 4N sodium hydroxide (0.19 mL, 0.77 mmol). The title compound was obtained as a yellow solid.
  • This compound was prepared using the standard Sonagashira procedure as described in General Procedures Example C.
  • the starting material was N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.34 g, 0.82 mmol) and 4-ethylsulfanyl-3-methoxy-3-methyl-but-1-yne (0.13 g, 0.82 mmol), reacted to yield the title compound as a yellow film.
  • This compound was prepared using the general de-protection procedure described in General Procedures Example B, starting from 2-ethylsulfanyl-1-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol (1.52 g, 3.69 mmol) and 4M sodium hydroxide as base (1.8 mL, 7.38 mmol) to yield the title compound as a bright yellow solid.
  • This compound was prepared using the general Sonagashira procedure as described in General Procedures Example C, starting from N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (1.89 g, 4.6 mmol) and 1-ethylsulfanyl-but-3-yn-2-ol (0.6 g, 4.6 mmol), reacted to yield the title compound as a yellow solid.
  • This compound was prepared from the general alkyne procedure as described in General Procedures Example D, starting from 0.5M ethynylmagnesium bromide (25 mL, 12.58 mmol) and ethylsulfanyl-acetaldehyde (1.31 g, 12.58 mmol), reacted to yield the title compound as a yellow oil.
  • This compound was prepared using the standard de-protection procedure, as described in General Procedure Example B, starting from 2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.65 g, 1.31 mmol) and using 4N sodium hydroxide as base (1 mL, 4.0 mmol) to yield the title compound as a solid.
  • This compound was prepared using the general Sonagashira procedure as described in General Procedures Example C, reacting N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.62 g, 1.5 mmol) and 3-(2,2,2-Trifluoro-ethylsulfanylmethyl)-pent-1yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a yellow sticky oil.
  • This compound was prepared using the standard de-protection procedure from, as described in General Procedures Example B, reacting 2-(5-chloro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.24 g, 0.50 mmol) and using 4N sodium hydroxide as a base (0.37 mL, 0.50 mmol) to yield the title compound as a yellow sticky oil.
  • This compound was prepared using the standard Sonagashira procedure as described in General Procedures Example C, reacting from N-(4-chloro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.60 g, 1.5 mmol) and 3-(2,2,2-Trifluoro-ethylsulfanylmethyl)-pent-1 yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a yellow sticky oil.
  • This compound was prepared using the general oxidation procedure as describe in General Procedures Example A.
  • the starting material used was 2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfanyl)-butan-2-ol (0.25 g, 0.61 mmol), which was reacted to yield the title compound as a yellow, fluffy solid.
  • This compound was prepared using the general de-protection procedure as describe in General Procedures Example B, reacting 2-(5-fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.59 g, 1.26 mmol) and using 4N sodium hydroxide as base (1 mL, 4.0 mmol) to yield the title compound as a solid.
  • This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.57 g, 1.5 mmol) and 3-(2,2,2-trifluoro-ethylsulfanylmethyl)-pent-1yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a brown oil.
  • This compound was prepared using the general de-protection procedure as describe in General Procedures Example B.
  • the starting material used was 1-butylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (0.53 g, 1.16 mmol).
  • the base that was used was 4N sodium hydroxide solution (1 mL, 4 mmol). The title compound was obtained as a yellow sticky oil.
  • This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.82 g, 2.0 mmol) and 3-methyl-hept-1-yn-3-ol (0.34 g, 2.0 mmol) to yield the title compound as a yellow oil.
  • This compound was prepared using the general alkyne procedure as describe in General Procedures Example D, reacting 0.5M ethynylmagnesium bromide (35.6 mL, 17.78 mmol) and hexan-2-one (2.6 g, 17.78 mmol) to yield the title compound as a yellow liquid.
  • N-(5-chloro-4-fluoro-2-iodo-phenyl)-methanesulfonamide (0.30 g, 1.0 mmol)
  • bis(triphenylphosphine) palladium(II) chloride 35 mg, 0.05 mmol
  • copper (I) iodide (19 mg, 0.1 mmol)
  • Tetrahydrofuran 5 mL
  • triethylamine (0.28 mL, 2.0 mmol
  • This compound was prepared using the general de-protection procedure as describe in General Procedures Example B, reacting 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-1-methanesulfonyl-6-trifluoromethyl-1H-indole-5-carbonitrile (219 mg, 0.54 mmol) and using 4M sodium hydroxide (0.40 mL, 1.62 mmol) as the base, to yield the title compound as a white solid.
  • This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(4-cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (1.0 g, 2.56 mmol) and 1-ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.37 g, 2.56 mmol) to yield the title compound as a yellow sticky oil.
  • 2,2,2-Trifluoroethanethiol (5.59 mL, 62.8 mmoL) in THF (50 mL) was treated with NaH (60%, 69.1 mmoL, 2.76 g) at 0° C. After bubbling ceased, chloroacetone (62.8 mmoL, 5 mL) was added into the reaction mixture via syringe slowly. The reaction mixture was then stirred at 0° C. for 2 hrs. The solvent was then removed and water and Et 2 O were added. The Et 2 O layer was washed with brine, dried over Na 2 SO 4 and concentrated to yield the title compound as an oil.
  • Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 48 (0.80 g, 6.06 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH 4 Cl was added to quench the reaction. THF was removed and Et 2 O was added. The aqueous phase was extracted with Et 2 O and the combined organic layer was Washed with brine, dried and concentrated to yield the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
  • Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 47 (1.0 g, 6.33 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH 4 Cl was added to quench the reaction. THF was removed and Et 2 O was added. The aqueous phase was extracted with Et 2 O and the combined organic layer was washed with brine, dried and concentrated to give the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
  • Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 49 (1.05 g, 6.10 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH 4 Cl was added to quench the reaction. THF was removed and Et 2 O was added. The aqueous phase was extracted with Et 2 O and the combined organic layer was washed with brine, dried and concentrated to yield the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
  • Example 54 The compound prepared as in Example 54 (565 mg, 1.16 mmoL) in 4 N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH 2 Cl 2 and H 2 O were added. The organic layer was washed with brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
  • Example 4 The compound prepared as in Example 4 (225 mg, 0.595 mmoL), PdCl 2 (Ph 3 P) 2 (84 mg, 0.119 mmoL), CuI (23 mg, 0.119 mmoL) and TEA (0.4 mL, 2.98 mmoL) in THF (10 mL) was degassed with N 2 for 5 min.
  • the compound prepared as in Example 50 300 mg, 1.46 mmoL was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et 2 O was added into the residue.
  • the mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil.
  • the crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
  • Example 56 The compound prepared as in Example 56 (125 mg, 0.284 mmoL) in 4 N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH 2 Cl 2 and H 2 O were added. The organic layer was washed with brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
  • Example 4 The compound prepared as in Example 4 (1.75 g, 4.63 mmoL), PdCl 2 (Ph 3 P) 2 (650 mg, 0.93 mmoL), CuI (177 mg, 0.93 mmoL) and TEA (3.23 mL, 23.15 mmoL) in THF (30 mL) were degassed with N 2 for 5 min.
  • the compound prepared as in Example 52 (917 mg, 4.63 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et 2 O was added into the residue.
  • the mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil.
  • the crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
  • Example 58 The compound prepared as in Example 58 (1.45 g, 3.02 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH 2 Cl 2 and H 2 O were added. The organic layer was washed with brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
  • Example 4 The compound prepared as in Example 4 (460 mg, 0.94 mmoL), PdCl 2 (Ph 3 P) 2 (132 mg, 0.188 mmoL), CuI (36 mg, 0.188 mmoL) and Et 3 N (0.66 mL, 4.70 mmoL) in THF (10 mL) were degassed with N 2 for 5 min.
  • the compound prepared as in Example 51 (190 mg, 1.034 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et 2 O was added into the residue.
  • the mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil.
  • the crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
  • Example 58 The compound prepared as in Example 58 (395 mg, 0.848 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH 2 Cl 2 and H 2 O were added. The organic layer was washed with brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
  • Example 64 The compound prepared as in Example 64 (264 mg, 0.62 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH 2 Cl 2 and H 2 O were added. The organic layer was washed with brine and dried over anhydrous Na 2 SO 4 , concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
  • Example 62 The compound prepared as in Example 62 (75 mg, 0.21 mmoL) was dissolved in CH 2 Cl 2 (2 mL) and H 2 O (2 mL). OXONE® (176 mg, 0.31 mmoL) and Bu 4 NHSO 4 (7 mg, 0.02 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH 2 Cl 2 was added and the aqueous phase was extracted 3 ⁇ with CH 2 Cl 2 . The combined organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
  • Example 65 The compound prepared as in Example 65 (125 mg, 0.36 mmoL) was dissolved in CH 2 Cl 2 (2 mL) and H 2 O (2 mL). OXONE® (306 mg, 0.54 mmoL) and Bu 4 NHSO 4 (12 mg, 0.036 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH 2 Cl 2 was added and the aqeous phase was extracted 3 ⁇ with CH 2 Cl 2 . The combined organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc to 4:1 CH 2 Cl 2 :MeOH as eluent) to yield the title compounds as white solids.
  • Example 63 The compound prepared as in Example 63 (105 mg, 0.29 mmoL) was dissolved in CH 2 Cl 2 (2 mL) and H 2 O (2 mL). OXONE® (306 mg, 0.54 mmoL) and Bu 4 NHSO 4 (10 mg, 0.03 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH 2 Cl 2 was added and the aqueous phase was extracted 3 ⁇ with CH 2 Cl 2 . The combined organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
  • Example 59 The compound prepared as in Example 59 (201 mg, 0.5 mmoL) was dissolved in CH 2 Cl 2 (2 mL) and H 2 O (2 mL). OXONE® (425 mg, 0.75 mmoL) and Bu 4 NHSO 4 (17 mg, 0.05 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH 2 Cl 2 was added and the aqueous phase was extracted 3 ⁇ with CH 2 Cl 2 . The combined organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc first and then 4:1 CH 2 Cl 2 :MeOH as eluent) to yield the title compounds as white solids.
  • Example 55 The compound prepared as in Example 55 (252 mg, 0.61 mmoL) was dissolved in CH 2 Cl 2 (2 mL) and H 2 O (2 mL). OXONE® (380 mg, 0.67 mmoL) and Bu 4 NHSO 4 (5 mg, 0.06 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH 2 Cl 2 was added and the aqeous phase was extracted 3 ⁇ with CH 2 Cl 2 . The combined organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc first and then 4:1 CH 2 Cl 2 :MeOH as eluent) to yield the title compounds as white solids.
  • N-(4-cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide the compound prepared as in Examples 81-82 (2.28 g, 5.69 mmoL), PdCl 2 (Ph 3 P) 2 (799 mg, 1.14 mmoL) and CuI (271 mg, 1.42 mmoL) in Et 3 N (10 mL) was degassed with N 2 for 5 min. 2-Methyl-1-buten-3-yne (1.06 mL, 11.38 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 3 hrs. The solvent was then removed and Et 2 O was added into the residue.
  • the mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crdue brown oil.
  • the crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
  • Example 71 The compound prepared as in Example 71 (210 mg, 0.622 mmoL) in CH 2 Cl 2 (5 mL) was treated with mCPBA (129 mg, 0.747 mmoL) at 0° C. The reaction mixture was slowly warmed to room temperature over 2 hrs. The mixture was then washed with saturated NaHCO 3 , brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the epoxide derivative as a white solid, along with the ketone by-product as a solid.
  • the mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude brown oil.
  • the crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
  • Example 9 The compound prepared as in Example 9 (955 mg, 2.74 mmoL) in CH 2 Cl 2 (20 mL) was treated with mCPBA (1.80 g, 8.22 mmoL) at 0° C. The reaction mixture was slowly warmed to room temperature over 2 hrs. The mixture was then washed with saturated NaHCO 3 , brine and dried over anhydrous Na 2 SO 4 , then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the epoxide derivative as a white solid, along with the ketone by-product as a solid.
  • the crude solid was dissolved in diethyl ether (400 mL), washed with water (3 ⁇ ), the organic extracts were diluted with hexanes (400 mL) and a white solid precipitated.
  • the solid was filtered and dried in a vacuum oven (35° C. @ 762 Torr) overnight to yield the title compound.
  • N-(4-Cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (1.82 g, 4.66 mmoles), dichlorobis(triphenylphosphine)palladium (160 mg, 0.23 mmoles) and copper iodide (90 mg, 0.47 mmoles) were suspended in anhydrous THF (20 mL), under a nitrogen atmosphere.
  • Triethylamine (1.30 mL, 9.33 mmoles) was added and after 10 min. of stirring, 1,1,1-trifluoro-2-methyl-but-3-yn-2-ol was added. The reaction mixture was stirred overnight at ambient temperature. The reaction mixture was then concentrated to a residue, which was purified by column chromatography (SiO 2 , 100% CH 2 Cl 2 ) to yield a semisolid.
  • Compound #217 and Compound #218 were prepared by separating 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 45, by chiral HPLC (Chiralpak AD, isopropyl alcohol to yield the corresponding less polar dextrorotatory (+) compound, Compound #218 and the more polar levorotatory ( ⁇ ) compound, Compound #217.
  • Chiralpak AD isopropyl alcohol
  • Compound #234 and Compound #233 were prepared by separating 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 78, by chiral HPLC (Chiralpak AD, 30% heptane in isopropyl alcohol into the less polar dextrorotatory (+) compound, Compound #234 and the more polar levorotatory ( ⁇ ) compound, Compound #223.
  • this aqueous solution was added to the ethyl acetate solution and the resulting biphasic mixture vigourously stirred. After 8 hours, an additional 3 equivalents of the pH-adjusted OXONE® solution was added and the mixture stirred overnight. Ethyl acetate (10 mL/mmol of sulfide) was added and the aqueous phase was removed. The organic phase was washed with brine, dried over anhydrous Na 2 SO 4 , concentrated to yield a yellow solid. This crude material (yellow solid) was purified using column chromatography (silica gel, ethyl acetate as eluent) to yield the title compound as a white solid.
  • the assay was run on a 96 well plate with each well filled with a total reaction volume 150 ⁇ L, of a solution containing 5 pmol androgen receptor LBD (Panvera) or 30 ⁇ L of freshly prepared rat cytosol, 0.5 nM [ 3 H] R1881 tracer (NEN), 1.5 ⁇ L (10 ⁇ M) test compound or vehicle (diluted in 30% DMSO, final concentration of DMSO 0.75%) and 150 ⁇ L of TED buffer.
  • TED buffer contains 10 mM Tris.HCl pH 7.4, 1 mM sodium molybdate, 1.5 mM EDTA, 1 mM DTT and 10% (v/v) glycerol.
  • the solution containing receptor, tracer and TED buffer was distributed into a 96 well plate. Diluted test compound or control vehicle was then added to individual wells and the plate incubated at 4° C. overnight.
  • IC 50 s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 ⁇ M) in the binding assay. Counts per well were measured and IC 50 s determined by linear regression.
  • IC 50 (nM) 1 14000 2 53000 3 26000 4 7600 5 39000 8 2650 12 39000 19 >100000 20 23500 21 >10200 22 >7700 22 >9600 23 54000 25 8800 52 150 53 1967 54 465 54 220 55 715 55 635 56 485 56 610 57 141 57 480 58 455 59 4100 60 6750 61 440 62 325 63 1550 64 815 65 945 66 2600 67 3000 68 19000 69 1200 70 750 75 9100 76 1244 77 1107 78 3556 79 >9500 80 6400 81 15000 82 185 82 200 83 160 83 545 84 180 85 460 86 1250 87 350 87 1650 88 5150 89 >9600 90 >9000 91 1285 92 37000 93 23000 94 15000 95 3000 96 1710 96 820 97 7400
  • mice Male Sprague Dawley or Wistar rats (Charles River, 200-300 g) were used for each preparation. The day before preparing the cytosol, the rats were castrated using standard surgical procedures.
  • the rats were euthanized by carbon dioxide asphyxiation.
  • the rat prostates were quickly removed and placed on ice in pre-chilled, pre-weighed 50 mL plastic tubes. No more than five prostates were placed into one tube. The tubes were then weighed and the prostate tissue wet weights calculated.
  • the homogenization buffer was freshly prepared by mixing 10 mM Tris.HCl, pH 7.4, 1 mM sodium molybdate, 1.5 mM EDTA, 1 mM dithiothreitol, 10% (v/v) glycerol and 1% protease inhibitor cocktail (Sigma P 8340).
  • the prostate tissue was homogenized in a cold room using a pre-chilled Polytron PT3000 homogenizer (Brinkmann). Homogenization was performed at a speed setting of 20, three times for 10 sec bursts. The tubes containing the prostate tissue was kept on ice while homogenizing. The homogenate was allowed to rest on ice for 20 sec between bursts.
  • the homogenate was then placed into pre-chilled 3 mL polycarbonate ultracentrifuge tubes and centrifuged in the TLA-100 rotor of a TL-100 ultracentrifuge for 12 min at 100,000 rpm at 4° C. The resulting supernatant was stored in 1 mL aliquots at ⁇ 80° C. until needed.
  • Binding to the androgen receptor was determined according to the protocol described in Example 86 using the above prepared rat cytosol.
  • % Inhibition was determined by testing dilutions of the test compound (usually duplicates of 10 ⁇ M) in the binding assay. Counts per well were measured and percents of inhibition determined. Androgen receptor binding IC 50 s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 ⁇ M) in the binding assay. Counts per well were measured and IC 50 s determined by linear regression.
  • COS-7 cells were plated in 96-well plates at 20,000 cells per well, in a solution of DMEM/F12 (GIBCO) containing 10% (v/v) charcoal-treated fetal bovine serum (Hyclone) and lacking phenol red. The cells were then incubated overnight at 37° C. in 5% (v/v) humidified CO 2 .
  • Test compound solutions were prepared by diluting the test compound in 100% (v/v) DMSO, if necessary. Each dilution yielded a solution which was 625 ⁇ the final desired test concentration.
  • the medium was removed from the 96-well plates by inversion and the plates dried very briefly, inverted, on a sterile towel. As soon as possible after medium removal, 40 ⁇ L of the diluted test compound was added to each well, in duplicate. To each well was then added 40 ⁇ L of the 2.5 nM [ 3 H]R1881 and 20 ⁇ L of the diluted adenovirus. The plates were then incubated for 48 hours at 37° C. in 5% (v/v) humidified CO 2 .
  • the medium was removed from the above incubated plates by inversion and dried. Each well was then washed with 0.35 mL of 1 ⁇ PBS. The PBS was then removed from the plates by inversion and the plates dried.
  • Percent inhibition was determined by testing dilutions of the test compound (usually duplicates of 10 ⁇ M) in the binding assay. Counts per well were measured and percents of inhibition determined. Androgen receptor binding IC 50 s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 ⁇ M) in the binding assay. Counts per well were measured and IC 50 s determined by linear regression.
  • L929 cells were plated in 96-well plates at 20,000 cells per well, in DMEM/F12 (GIBCO) containing 10% (v/v) charcoal-treated fetal bovine serum (Hyclone) and lacking phenol red. The plates were then incubated overnight at 37° C. in 5% (v/v) humidified CO 2 .
  • Test compound dilutions were prepared in 100% (v/v) DMSO, if necessary. Each dilution was made to 1250 ⁇ the final desired assay concentration.
  • the medium was removed from the 96-well plates by inversion and dried, inverted, very briefly. As soon as possible after medium removal, 40 ⁇ L of the diluted unlabeled test compound was added to each well, in duplicate. To each well designated for antagonist testing was added 40 ⁇ L of the 2.5 nM R1881 dilution to the wells for antagonist testing. To each well designated for agonist testing was added 40 ⁇ L of the DMSO dilution. Then 20 ⁇ L of the diluted adenovirus were added to all wells. The plates were incubated for 48 hours at 37° C. in 5% (v/v) humidified CO 2 .
  • L929 AR percent activity was determined by testing dilutions of the test compound using a concentration of 3000 nM unless otherwise noted.
  • L929 percent inhibition was determined by testing dilutions of the test compound using a concentration of 3000 nM.
  • EC 50 s and IC 50 s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 ⁇ M). Luciferase activity per well were measured and EC 50 s and IC 50 s determined by linear regression.
  • Immature approximately 50 g castrated male Sprague Dawley rats (Charles River) were treated once daily for five days with test compound (usually given orally at 40 mg/kg in a volume of 0.3 mL, in 30% cyclodextrin or 0.5% methylcellulose vehicle) and with testosterone propionate (given subcutaneously by injection at the nape of the neck at 2 mg/kg, in a volume of 0.1 mL in sesame oil).
  • test compound usually given orally at 40 mg/kg in a volume of 0.3 mL, in 30% cyclodextrin or 0.5% methylcellulose vehicle
  • testosterone propionate given subcutaneously by injection at the nape of the neck at 2 mg/kg, in a volume of 0.1 mL in sesame oil.
  • the rats were euthanized by asphyxiation in carbon dioxide.
  • Ventral prosatates and seminal vesicles were removed and their wet weights determined.
  • Test compound activity was determined as the percent inhibition
  • test compound was said to be “active” if the non weight adjusted prostate weight was ⁇ 40 mg or the % Inhibition prostate weight, body weight adjusted was ⁇ 40% @ 2 mg/day dosage. ID 50 's, if determined, of ⁇ 15 mg/day also indicated an “active” compound.
  • an oral composition 50 mg of Compound #222 prepared as described above is formulated with sufficient finely divided lactose to provide a total amount of 580 to 590 mg to fill a size O hard gel capsule.

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Abstract

The present invention is directed to novel indole derivatives, pharmaceutical compositions containing them and their use in the treatment of disorders and conditions modulated by the androgen receptor.

Description

CROSS REFERENCE TO RELATED APPLICATIONS
This application claims the benefit of U.S. Provisional Application 60/567,763, filed on May 3, 2004, which is incorporated by reference herein in its entirety.
FIELD OF THE INVENTION
The present invention is directed to novel indole derivatives, pharmaceutical compositions containing them and their use in the treatment of disorders and conditions modulated by the androgen receptor. More particularly, the compounds of the present invention are useful in the treatment of prostate carcinoma, benign prostatic hyperplasia (BPH), hirsutism, alopecia, anorexia nervosa, breast cancer, acne, AIDS, cachexia, as a male contraceptive, and/or as a male performance enhancer.
BACKGROUND OF THE INVENTION
Androgens are the anabolic steroid hormones of animals, controlling muscle and skeletal mass, the maturation of the reproductive system, the development of secondary sexual characteristics and the maintenance of fertility in the male. In women, testosterone is converted to estrogen in most target tissues, but androgens themselves may play a role in normal female physiology, for example, in the brain. The chief androgen found in serum is testosterone, and this is the effective compound in tissues such as the testes and pituitary. In prostate and skin, testosterone is converted to dihydrotestosterone (DHT) by the action of 5α-reductase. DHT is a more potent androgen than testosterone because it binds more strongly to the androgen receptor.
Like all steroid hormones, androgens bind to a specific receptor inside the cells of target tissues, in this case the androgen receptor. This is a member of the nuclear receptor transcription factor family. Binding of androgen to the receptor activates it and causes it to bind to DNA binding sites adjacent to target genes. From there it interacts with coactivator proteins and basic transcription factors to regulate the expression of the gene. Thus, via its receptor, androgens cause changes in gene expression in cells. These changes ultimately have consequences on the metabolic output, differentiation or proliferation of the cell that are visible in the physiology of the target tissue.
Although modulators of androgen receptor function have been employed clinically for some time, both the steroidal (Basaria, S., Wahlstrom, J. T., Dobs, A. S., J. Clin Endocrinol Metab (2001), 86, pp 5108-5117; Shahidi, N. T., Clin Therapeutics, (2001), 23, pp 1355-1390), and non-steroidal (Newling, D. W., Br. J. Urol., 1996, 77 (6), pp 776-784) compounds have significant liabilities related to their pharmacological parameters, including gynecomastia, breast tenderness and hepatotoxicity. In addition, drug-drug interactions have been observed in patients receiving anticoagulation therapy using coumarins. Finally, patients with aniline sensitivities could be compromised by the metabolites of non-steroidal antiandrogens.
Non-steroidal agonists and antagonists of the androgen receptor are useful in the treatment of a variety of disorders and diseases. More particularly, agonists of the androgen receptor could be employed in the treatment of prostate cancer, benign prostatic hyperplasia, hirsutism in women, alopecia, anorexia nervosa, breast cancer and acne. Antagonists of the androgen receptor could be employed in male contraception, male performance enhancement, as well as in the treatment of cancer, AIDS, cachexia, and other disorders.
Nonetheless, there exists a need for small molecule, non-steroidal antagonists of the androgen receptor. We now describe a novel series of indole derivatives as androgen receptor modulators.
SUMMARY OF THE INVENTION
The present invention is directed to a compound of formula (I)
Figure US07282507-20071016-C00001
X is selected from the group consisting of O, S and NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —SO2-phenyl, —SO2-tolyl, —(CH2)-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
R2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
wherein each Z is independently selected from the group consisting of —S(O)0-2—, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
wherein each R6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
wherein the cycloalkyl, aryl or heteroaryl group, whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
provided that when Z is O, NH or N(lower alkyl) then R6 is other than lower alkenyl;
provided further that when R2 is methyl, than R3 is other than methyl;
provided further that when X is NR1, R1 is hydrogen or lower alkyl, b is 1, c is 0, R4 is hydrogen, R7 is hydrogen, a is 0 (R5 is absent) and R2 is CF3, then R3 is other than CF3;
provided-further that when X is NH, R4 is methyl, b is 0, c is 0, R7 is hydrogen, a is 0 (R5 is absent) and R2 is methyl, then R3 is other than CF3;
provided further that when X is NR1, R1 is hydrogen or lower alkyl, R4 is hydrogen or methyl, b is 0, c is 0, R7 is hydrogen, a is 0 (R5 is absent) and R2 is hydrogen or methyl, then R3 is other than —(CH2)1-2—N(RA)-(lower alkyl) or —(CH2)3—N(RA)-(benzyl);
provided further that when X is NH, R4 is hydrogen, b is 1, c is 0, R7 is hydrogen, a is 0 (R5 is absent) and R2 is hydrogen, then R3 is other than —(CH2)—NH-(lower alkyl);
provided further that when X is NH, R4 is hydrogen, a is 0 (R5 is absent), R7 is hydrogen, b is 0, c is 0 and R2 is CF3, then R3 is other than —CH2—O—C(O)—CH3;
provided further that when X is NH, R4 is hydrogen, a is 0 (R5 is absent), R7 is hydrogen, b is 1, c is 1 and R2 is hydrogen, then R3 is other than —CH2—O—C(O)—CH3;
provided further that when X is NR1, R1 is hydrogen or methyl, R4 is hydrogen or methyl, b is 0, c is 0, a is 0 (R5 is absent), R7 is hydrogen and R2 is hydrogen, then R3 is other than —CH2—O-lower alkyl or —CH2—O-benzyl;
provided further that when X is O, R4 is hydrogen, b is 0, c is 0, R7 is hydrogen and R2 is hydrogen, then R3 is other than CH2—O-phenyl, wherein the phenyl is optionally substituted with one to two substituents independently selected from lower alkyl, hydroxy substituted lower alkyl, carboxy and —C(O)-(lower alkoxy);
or a pharmaceutically acceptable salt thereof.
The present invention is further directed to a compound of formula (II)
Figure US07282507-20071016-C00002
wherein
X is selected from the group consisting of O, S and NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —SO2-phenyl, —SO2-tolyl, —(CH2)-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
Figure US07282507-20071016-C00003
is a four to seven membered, saturated or partially unsaturated ring structure (i.e. not an aromatic ring), containing one to two heteroatoms selected from O, N or S; wherein the four to seven membered, saturated or partially unsaturated ring structure is optionally substituted with a substituent selected from -(L1)0-1—R8;
wherein L1 is selected from the group consisting of —(CH2)1-4—, —C(O)—, —C(O)—(CH2)1-4—, —C(O)O— and —C(O)O—(CH2)1-4;
wherein R8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
provided that when X is NH or N(CH3), R4 is hydrogen, b is 0, c is 0, R7 is hydrogen or methyl and a is 0 (R5 is absent), then
Figure US07282507-20071016-C00004
is other than piperidinyl, wherein the piperidinyl is optionally substituted with lower alkyl or aralkyl;
or a pharmaceutically acceptable salt thereof.
The present invention is further directed to a compound of formula (III)
Figure US07282507-20071016-C00005
wherein
Figure US07282507-20071016-C00006
is a six membered heteroaryl ring structure containing one to two nitrogen atoms;
Y is NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —SO2-phenyl, —SO2-tolyl, —(CH2)-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
R2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
wherein each Z is independently selected from the group consisting of —S(O)0-2—, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
wherein each R6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
wherein the cycloalkyl, aryl or heteroaryl group, whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
provided that when Z is O, NH or N(lower alkyl) then R6 is other than lower alkenyl;
or a pharmaceutically acceptable salt thereof.
Illustrative of the invention is a pharmaceutical composition comprising a pharmaceutically acceptable carrier and any of the compounds described herein. An illustration of the invention is a pharmaceutical composition made by mixing any of the compounds described herein and a pharmaceutically acceptable carrier. Illustrating the invention is a process for making a pharmaceutical composition comprising mixing any of the compounds described herein and a pharmaceutically acceptable carrier.
Exemplifying the invention are methods of treating disorders and conditions modulated by the androgen receptor in a subject in need thereof comprising administering to the subject a therapeutically effective amount of any of the compounds or pharmaceutical compositions described herein.
An example of the invention is a method for treating an androgen receptor modulated disorder selected from the group consisting of prostate carcinoma, benign prostatic hyperplasia, hirsutism, or for male contraception, in a subject in need thereof comprising administering to the subject an effective amount of any of the compounds or pharmaceutical compositions described herein.
Another example of the invention is the use of any of the compounds described herein in the preparation of a medicament for treating: (a) prostate carcinoma, (b) benign prostatic hyperplasia, (c) hirsutism, (d) alopecia, (e) anorexia nervosa, (f) breast cancer, (g) acne, (h) AIDS, (i) cachexia, for (j) male contraception, or for (k) male performance enhancement, in a subject in need thereof.
DETAILED DESCRIPTION OF THE INVENTION
The present invention is directed to compounds of formula (I), compounds of formula (II) and compounds of formula (III)
Figure US07282507-20071016-C00007
Figure US07282507-20071016-C00008
wherein
Figure US07282507-20071016-C00009
a, b, c, X, Y, R2, R3, R4, R5 and R7 are as herein defined, useful as selective androgen receptor modulators for the treatment of prostate carcinoma, benign prostatic hyperplasia (BPH), hirsitutism, alopecia, anorexia nervosa, breast cancer, acne, AIDS, cachexia, as a male contraceptive, and/or as a male performance enhancer.
In an embodiment, the present invention is directed to compounds of formula (I) wherein
X is selected from the group consisting of O, S and NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —(CH2)-(fluorinated lower alkyl),-(lower alkyl)-CN,-(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
R2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
wherein each Z is independently selected from the group consisting of —S(O)0-2—, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
wherein each R6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
wherein the cycloalkyl, aryl or heteroaryl group, whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
and pharmaceutically acceptable salts thereof.
In an embodiment, the present invention is directed to compounds of formula (II) wherein
X is selected from the group consisting of O, S and NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —(CH2)-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
Figure US07282507-20071016-C00010
is a four to seven membered saturated or partially unsaturated ring structure, containing one to two heteroatoms selected from O, N or S; wherein the four to seven membered saturated or partially unsaturated ring structure is optionally substituted with a substituent selected from -(L1)0-1—R8;
wherein L1 is selected from the group consisting of —(CH2)1-4—, —C(O)—, —C(O)—(CH2)1-4—, —C(O)O— and —C(O)O—(CH2)1-4;
wherein R8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
and pharmaceutically acceptable salts thereof.
In an embodiment, the present invention is directed to compounds of formula (III) wherein
Figure US07282507-20071016-C00011
is a six membered heteroaryl ring structure containing one to two nitrogen atoms;
Y is NR1;
R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, —SO2-(lower alkyl), —(CH2)-(fluorinated lower alkyl), -(lower alkyl)-CN, -(lower alkyl)-C(O)—O-(lower alkyl), -(lower alkyl)-O-(lower alkyl) and -(lower alkyl)-S(O)0-2-(lower alkyl);
R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, lower alkenyl or lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3;
a is an integer from 0 to 4;
R5 is selected from the group consisting halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —C(O)—N(RA)2, —S(O)0-2-(lower alkyl), —SO2—N(RA)2, —N(RA)—C(O)-(lower alkyl), —N(RA)—C(O)-(halogen substituted lower alkyl) and aryl;
wherein each RA is independently selected from hydrogen or lower alkyl;
wherein the aryl is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino;
b is an integer from 0 to 1;
c is an integer from 0 to 1;
R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3;
R2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl and —(CH2)1-4-Z-R6;
wherein each Z is independently selected from the group consisting of —S(O)0-2—, —O—, —O—C(O)—, —NH— and —N(lower alkyl)-;
wherein each R6 is independently selected from the group consisting of lower alkyl, halogen substituted lower alkyl lower alkenyl, aryl, aralkyl, biphenyl, cycloalkyl, cycloalkyl-(lower alkyl), heteroaryl and heteroaryl-(lower alkyl);
wherein the cycloalkyl, aryl or heteroaryl group, whether alone or part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2;
and pharmaceutically acceptable salts thereof.
In an embodiment of the present invention is a compound of formula (Ia)
Figure US07282507-20071016-C00012
i.e. a compound of formula (I) wherein b and c are each 0. In an embodiment of the present invention is a compound of formula (Ia) wherein R2 is other than —(CH2)1-4-Z-R6. In another embodiment of the present invention is a compound of formula (Ia) wherein R3 is selected from —(CH2)1-4-Z-R6.
In an embodiment of the present invention is a compound of formula (Ia) wherein R3 is —(CH2)1-4—S(O)0-2—R6. In another embodiment of the present invention is a compound of formula (Ia) wherein R3 is selected from —(CH2)1-4—NH—R6. or —(CH2)1-4—N(lower alkyl)-R6. In yet another embodiment of the present invention is a compound of formula (Ia) wherein R3 is selected from —(CH2)1-4—O—R6. or —(CH2)1-4—O—C(O)—R6.
In an embodiment of the present invention
Figure US07282507-20071016-C00013
is pyridyl. In another embodiment of the present invention,
Figure US07282507-20071016-C00014
is selected from the group consisting of
Figure US07282507-20071016-C00015
Preferably,
Figure US07282507-20071016-C00016
is selected from the group consisting of
Figure US07282507-20071016-C00017
In another embodiment of the present invention,
Figure US07282507-20071016-C00018
is selected from the group consisting of
Figure US07282507-20071016-C00019
In an embodiment of the present invention is a compound of formula (III) wherein R3 is —(CH2)1-4—S(O)0-2—R6. In another embodiment of the present invention is a compound of formula (III) wherein R3 is selected from —(CH2)1-4—NH—R6. or —(CH2)1-4—N(lower alkyl)-R6. In yet another embodiment of the present invention is a compound of formula (III) wherein R3 is selected from —(CH2)1-4—O—R6. or —(CH2)1-4—O—C(O)—R6.
In an embodiment of the present invention
Figure US07282507-20071016-C00020
is a four to seven membered saturated or partially unsaturated ring structure, containing one to two heteroatoms selected from O, N or S; wherein the four to seven membered saturated or partially unsaturated ring structure is optionally substituted with a substituent selected from -(L1)0-1—R8.
In an embodiment of the present invention L1 is selected from the group consisting of —(CH2)1-4—, —C(O)— and —C(O)—(CH2)1-4—.
In an embodiment of the present invention R8 is selected from the group consisting of aryl and heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2.
In an embodiment of the present invention
Figure US07282507-20071016-C00021
is selected from the group consisting of tetrahydro-thienyl, tetrahydro-thiopyranyl and piperidinyl.
In another embodiment of the present invention
Figure US07282507-20071016-C00022
is piperidinyl, wherein the piperidinyl is optionally substituted with a group selected from aryl, aryl-cabronyl, aralkyl or aralkyl-carbonyl, and wherein the aryl or aralkyl substituent on the piperidinyl is optionally substituted with one or more, preferably one to two, more prepferably one, substituent selected from the group consisting of halogen, lower alkyl, lower alkoxy, trifluoromethyl, trifluoromethoxy and lower alkyl-sulfonyl.
In yet another embodiment of the present invention
Figure US07282507-20071016-C00023
is piperidinyl, wherein the piperidinyl is optionally substituted with a group selected from benzyl, fluoro-benzyl, chloro-benzyl, dichloro-benzyl, methyl-benzyl, methoxy-benzyl, trifluoromethyl-benzyl, t-butyl-benzyl, methylsulfonyl-benzyl, benzyloxy-carbonyl or chlorophenyl-carbonyl.
In an embodiment of the present invention a is an integer from 0 to 3. Preferably, a is an integer from 0 to 2. More preferably, a is an integer from 1 to 2.
In an embodiment of the present invention b is 0 and c is 1. In another embodiment of the present invention b is 1 and c is 0. In yet another embodiment of the present invention b is 0 and c is 0.
In an embodiment of the present invention X is O or NR1. Preferably, X is NR1.
In an embodiment of the present invention R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, -(lower alkyl)-CN, (lower alkyl)-O-(lower alkyl), (lower alkyl)-S(O)0-2-(lower alkyl), —SO2-(lower alkyl), —SO2-phenyl and —SO2-toyl.
In another embodiment of the present invention R1 is selected from the group consisting of hydrogen, lower alkyl, fluorinated lower alkyl, -(lower alkyl)-CN, (lower alkyl)-O-(lower alkyl), (lower alkyl)-S(O)0-2-(lower alkyl) and —SO2-(lower alkyl).
In another embodiment of the present invention R1 is selected from the group consisting of hydrogen, lower alkyl, halogentated lower alkyl, lower alkyl-sulfonyl, lower alkoxy-lower alkyl, cyano-lower alkyl and lower alkyl-thio-lower alkyl. Preferably, R1 is selected from the group consisting of hydrogen, methyl, ethyl, 2,2,2-trifluoroethyl, methyl-sulfonyl, methoxy-methyl, cyano-methyl and methyl-thio-methyl.
In an embodiment of the present invention R2 is selected from the group consisting of hydrogen, lower alkyl, halogen substituted lower alkyl and —(CH2)-Z-R6, wherein Z is selected from the group consisting of —S(O)0-2—, preferably Z is —S—. Preferably. R2 is selected from the group consisting of hydrogen, methyl, ethyl, trifluoromethyl and —CH2—S-ethyl.
In another embodiment of the present invention R2 is selected from the group consisting of hydrogen and lower alkyl. Preferably, R2 is selected from the group consisting of hydrogen and methyl. More preferably, R2 is methyl. In another embodiment, R2 is selected from the group consisting of hydrogen and trifluoromethyl.
In an embodiment of the present invention R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, —(CH2)0-2-Z-R6.
In another embodiment of the present invention R3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —CH2—O-(4-cyanophenyl), —CH2—O-(3-nitrophenyl), —CH2-(3-trifluoromethyl-4-cyanophenyl), —S-methyl, —S-isopropyl, —S-cyclohexyl, —S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO2-(4-chlorophenyl), —SO2-(3,4-dichlorophenyl), —CH2—S-methyl, —CH2—S-ethyl, —CH2—S-butyl, —CH2—S-propyl, —CH2—S-isopropyl, —CH2—S-isobutyl, —CH2—S-allyl, —CH2—S-phenyl, —CH2—S-(2-chlorophenyl), —CH2—S-(4-chlorophenyl), —CH2—S-(4-fluorophenyl), —CH2—S-(4-methoxyphenyl), —CH2—S-(4-carboxyphenyl), —CH2—S-(4-hydroxyphenyl), —CH2—S-(4-nitrophenyl), —CH2—S-(4-aminophenyl), —CH2—S-(4-dimethylamino-phenyl), —CH2—S-(3,4-dichlorophenyl), —CH2—S-(2,2,2-trifluoroethyl), —CH2—S-benzyl, —CH2—S-cyclopentyl, —CH2—S-cyclohexyl, —CH2—S-(2-thienyl-methyl), —CH2—S-(2-furyl-methyl), —CH2—S-(2-pyridyl-methyl), —CH2—SO-ethyl, —CH2—SO-phenyl, —CH2—SO-(3,4-dichlorophenyl), —CH2—SO-(2,2,2-trifluoroethyl), —CH2—SO-benzyl, —CH2—SO2-methyl, —CH2—SO2-ethyl, —CH2—SO2-propyl, —CH2—SO2-(4-fluorophenyl), —CH2—SO2-(4-hydroxyphenyl), —CH2—SO2-(4-aminophenyl), —CH2—SO2-(4-dimethylamino-phenyl), —CH2—SO2-(4-methoxyphenyl), —CH2—SO2-(2,2,2-trifluoroethyl), —CH2—SO2-benzyl, —CH2CH2—S-methyl, —CH2CH2—SO-methyl, —CH2CH2—SO2-methyl, —CH2—O—C(O)-(2-chlorophenyl), —CH2—O—C(O)-(3-chlorophenyl), —CH2—O—C(O)-(4-chlorophenyl), —CH2—O—C(O)-(4-fluorophenyl), —CH2—O—C(O)-(4-nitrophenyl), —CH2—O—C(O)-(4-methyl-phenyl), —CH2—O—C(O)-(4-methoxy-phenyl), —CH2—O—C(O)-(2-trifluoro-methyl-phenyl), —CH2—O—C(O)-(4-t-butyl-phenyl), —CH2—O—C(O)-phenyl, —CH2—O—C(O)-(3,4-dichloro-phenyl), —CH2—O—C(O)-(2,6-dichloro-phenyl), —CH2—O—C(O)-(4-dimethyl-amino-phenyl), —CH2—O—C(O)-(4-biphenyl), —CH2—O—C(O)-(2-pyridyl), —CH2—O—C(O)-(3-pyridyl) and —CH2—O—C(O)-(5-chloro-6-benzothienyl).
In another embodiment of the present invention R3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —S-methyl, —S-isopropyl, —S-cyclohexyl, —S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO2-(4-chlorophenyl), —SO2-(3,4-dichlorophenyl), —CH2—S-methyl, —CH2—S-ethyl, —CH2—S-butyl, —CH2—S-propyl, —CH2—S-isopropyl, —CH2—S-isobutyl, —CH2—S-allyl, —CH2—S-phenyl, —CH2—S-(2-chlorophenyl), —CH2—S-(4-chlorophenyl), —CH2—S-(4-fluorophenyl), —CH2—S-(4-methoxyphenyl), —CH2—S-(4-carboxyphenyl), —CH2—S-(4-hydroxyphenyl), —CH2—S-(4-nitrophenyl), —CH2—S-(4-aminophenyl), —CH2—S-(4-dimethylamino-phenyl), —CH2—S-(3,4-dichlorophenyl), —CH2—S-(2,2,2-trifluoroethyl), —CH2—S-benzyl, —CH2—S-cyclopentyl, —CH2—S-cyclohexyl, —CH2—S-(2-thienyl-methyl), —CH2—S-(2-furyl-methyl), —CH2—S-(2-pyridyl-methyl), —CH2—SO-ethyl, —CH2—SO-phenyl, —CH2—SO-(3,4-dichlorophenyl), —CH2—SO-(2,2,2-trifluoroethyl), —CH2—SO-benzyl, —CH2—SO2-methyl, —CH2—SO2-ethyl, —CH2—SO2-propyl, —CH2—SO2-(4-fluorophenyl), —CH2—SO2-(4-hydroxyphenyl), —CH2—SO2-(4-aminophenyl), —CH2—SO2-(4-dimethylamino-phenyl), —CH2—SO2-(4-methoxyphenyl), —CH2—SO2-(2,2,2-trifluoroethyl), —CH2—SO2-benzyl, —CH2CH2—S-methyl, —CH2CH2—SO-methyl, —CH2CH2—SO2-methyl, —CH2—O—C(O)-(2-chlorophenyl), —CH2—O—C(O)-(3-chlorophenyl), —CH2—O—C(O)-(4-chlorophenyl), —CH2—O—C(O)-(4-fluorophenyl), —CH2—O—C(O)-(4-nitrophenyl), —CH2—O—C(O)-(4-methyl-phenyl), —CH2—O—C(O)-(4-methoxy-phenyl), —CH2—O—C(O)-(2-trifluoro-methyl-phenyl), —CH2—O—C(O)-(4-t-butyl-phenyl), —CH2—O—C(O)-phenyl, —CH2—O—C(O)-(3,4-dichloro-phenyl), —CH2—O—C(O)-(2,6-dichloro-phenyl), —CH2—O—C(O)-(4-dimethyl-amino-phenyl), —CH2—O—C(O)-(4-biphenyl), —CH2—O—C(O)-(2-pyridyl), —CH2—O—C(O)-(3-pyridyl) and —CH2—O—C(O)-(5-chloro-6-benzothienyl).
In another embodiment of the present invention R3 is selected from the group consisting of —CH2—S(O)0-2—R6, wherein R6 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, aryl, aralkyl, biphenyl, heteroaryl and heteroaryl alkyl); wherein the aryl or heteroaryl group, whether alone or as part of a substituent group is optionally substituted with one or more, preferably, one to three, substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, halogen substituted lower alkyl, lower alkoxy, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, —S(O)0-2-(lower alkyl) and —SO2—N(RA)2; and wherein each RA is independently selected from hydrogen or lower alkyl. Preferably, R3 is selected from the group consisting of —CH2—S(O)0-2-(lower alkyl), more preferably, R3 is selected from the group consisting of —CH2—S-(lower alkyl) and —CH2—SO2-(lower alkyl).
In an embodiment of the present invention Z is selected from the group consisting of —S(O)0-2—, —O— and —O—C(O)—. In another embodiment of the present invention Z is selected from the group consisting of —S(O)0-2— and —O—C(O)—. In another embodiment of the present invention Z is selected from the group consisting of —S—, —SO— and —SO2—, preferably Z is selected from the group consisting of —S— and —SO2—. In another embodiment of the present invention Z is selected from the group consisting of —NH— and —N(lower alkyl)-. In yet another embodiment of the present invention Z is selected from the group consisting of —O— and —O—C(O)—, preferably Z is —O—C(O)—.
In an embodiment of the present invention R6 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, lower alkenyl, cycloalkyl, aryl, aralkyl, biphenyl, heteroaryl and heteroaryl-(lower alkyl)-; wherein the aryl or heteroaryl, whether alone or as part of a substituent group is optionally substituted with one or more substituents independently selected from halogen, hydroxy, carboxy, cyano, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl halogen substituted lower alkyl, lower alkoxy or —S(O)0-2-(lower alkyl).
In another embodiment of the present invention, R6 is selected from the group consisting of lower alkyl, lower alkenyl, halogen substituted lower alkyl, cycloalkyl, aryl, aralkyl, heteroaryl and -(lower alkyl)-heteroaryl; wherein the aryl or heteroaryl, whether alone or as part of a substituent group, is optionally substituted with one or more, preferably one to two, substituents independently selected from halogen, hydroxy, carboxy, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, trifluoromethyl or phenyl.
Preferably, R6 is selected from the group consisting of methyl, ethyl, propyl, isopropyl, butyl, isobutyl, allyl, cyclopentyl, cyclohexyl, phenyl, 2-chlorophenyl, 3-chlorophenyl, 4-chlorophenyl, 4-fluorophenyl, 4-methylphenyl, 4-methoxyphenyl, 4-carboxyphenyl, 4-hydroxyphenyl, 4-nitrophenyl, 4-aminophenyl, 4-dimethylamino-phenyl, 3,4-dichlorophenyl, 2,6-dichloro-phenyl 2-trifluoromethyl-phenyl, 2,2,2-trifluoroethyl, benzyl, 2-thienyl-methyl, 2-furyl-methyl, 2-pyridyl-methyl, 4-biphenyl, 2-pyridyl, 3-pyridyl and 5-chloro-6-benzothienyl.
In an embodiment of the present invention, R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl and cyano; wherein the lower alkyl, the lower alkenyl or the lower alkynyl is optionally substituted on the terminal carbon atom with —Si(lower alkyl)3. In another embodiment of the present invention R4 is selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkenyl, lower alkynyl, cyano and —CC—Si(CH3)3. Preferably, R4 is selected from the group consisting of hydrogen, chloro, iodo, bromo, methyl, ethyl, —CH═CH2, —CCH, cyano and —CC—Si(CH3)3.
In an embodiment of the present invention R5 is selected from the group consisting of halogen, lower alkyl, halogen substituted lower alkyl, lower alkoxy, halogen substituted lower alkoxy, cyano, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, —C(O)-(lower alkyl), —C(O)-(lower alkoxy), —NH—C(O)-(lower alkyl), —NH—C(O)-(trifluoromethyl) and phenyl; wherein the phenyl is optionally substituted with one or more, preferably, one to two substituents independently selected from halogen, hydroxy, carboxy, lower alkyl, trifluoromethyl, lower alkoxy, trifluoromethoxy, cyano, nitro, amino, lower alkylamino or di(lower alkyl)amino.
In another embodiment of the present invention R5 is selected from the group consisting of halogen, cyano, nitro, amino, lower alkylamino, di(lower alkyl)amino, carboxy, lower-alkyl-carbonyl, lower alkoxy-carbonyl, halogenated lower alkyl, preferably fluorinated lower alkyl, —NHC(O)—CF3, phenyl and phenyl substituted with a halogen. Preferably, R5 is selected from the group consisting of chloro, fluoro, bromo, cyano, nitro, amino, trifluoromethyl, —NHC(O)—CF3, methoxy-carbonyl and chloro-phenyl.
In another embodiment of the present invention, R5 is selected from the group consisting of halogen lower alkyl, lower alkoxy, trifluoromethyl, cyano, nitro, amino, —NH—C(O)—CF3, —C(O)-lower alkoxy and phenyl substituted with halogen. Preferably, R5 is selected from the group consisting of chloro, bromo, fluoro, iodo, methyl, trifluoromethyl, methoxy, cyano, nitro, amino, —NH—C(O)—CF3, methoxy-carbonyl- and 3-chlorophenyl.
In an embodiment of the present invention, R7 is selected from the group consisting of hydrogen, lower alkyl and —Si(lower alkyl)3. In another embodiment of the present invention R7 is selected from the group consisting of hydrogen, lower alkyl and Si(methyl)3. Preferably, R7 is selected from the group consisting of hydrogen, methyl and trimethyl-silyl.
In an embodiment of the present invention R2 is other than methyl and R3 is other than methyl. Preferably, R2 is other than lower alkyl and R3 is other than lower alkyl.
In an embodiment of the present invention X is O. In another embodiment of the present invention X is NR1 and R1 is selected from the group consisting of hydrogen, (lower alkyl)-sulfonyl (preferably, methyl-sulfonyl), phenylsulfonyl, toylysulfonyl (preferably p-tolylsulfonyl), lower alkyl (preferably, methyl or ethyl), —CH2-(fluorinated lower alkyl) (preferably, 2,2,2-trifluoroethyl), cyano-(lower alkyl) (preferably, cyano-methyl), (lower alkyl)-O-(lower alkyl) (preferably, methoxy-methyl) and (lower alkyl)-S-(lower alkyl) (preferably, methyl-thio-methyl).
In another embodiment of the present invention X is O. In another embodiment of the present invention X is NR1 and R1 is selected from the group consisting of hydrogen, (lower alkyl)-sulfonyl (preferably, methyl-sulfonyl), lower alkyl (preferably, methyl or ethyl), —CH2-(fluorinated lower alkyl) (preferably, 2,2,2-trifluoroethyl), cyano alkyl) (preferably, cyano-methyl), (lower alkyl)-O-(lower alkyl) (preferably, methoxy-methyl) and (lower alkyl)-S-(lower alkyl) (preferably, methyl-thio-methyl).
In an embodiment of the present invention R7 is hydrogen or lower alkyl (preferably methyl). In another embodiment of the present invention b and c are each 0.
In an embodiment of the present invention R4 is selected from the group consisting of hydrogen, halogen (preferably, chloro, bromo or iodo), cyano, lower alkyl (preferably, methyl or ethyl), lower alkenyl (preferably, —CH═CH2), lower alkynyl (preferably, —CCH) and —CC—Si(CH3)3. In another embodiment of the present invention R4 is selected from the group consisting of hydrogen and lower alkyl, preferably, R4 is hydrogen or methyl.
In an embodiment of the present invention a is an integer from 0 to 3, preferably 1 to 3 and R5 is selected from the group consisting of halogen (preferably, chloro, bromo or fluoro), nitro, amino, cyano, (lower alkoxy)-carbonyl (preferably, methoxy-carbonyl), trifluoromethyl, —NHC(O)—CF3 and halogen substituted phenyl (preferably, chlorophenyl).
In an embodiment of the present invention R2 is selected from the group consisting of hydrogen, lower alkyl, trifluoromethyl and —(CH2)—S(O)0-2—R6, wherein R6 is selected from lower alkyl (preferably, methyl or ethyl). Preferably, R2 is selected from the group consisting of hydrogen, methyl, ethyl, trifluoromethyl and —CH2—S-ethyl. In another embodiment of the present invention R2 is selected from the group consisting of hydrogen and lower alkyl. Preferably, R2 is selected from the group consisting of hydrogen and methyl. More preferably, R1 is methyl. In another embodiment, R2 is selected from the group consisting of hydrogen and trifluoromethyl.
In an embodiment of the present invention R3 is selected from the group consisting of lower alkyl, halogen substituted lower alkyl, —(CH2)0-2-Z-R6; wherein Z is selected from —S—, —SO—, —SO2— and —O—C(O)—; and wherein R6 is selected from the group consisting of lower alkyl, lower akenyl, halogen substituted lower alkyl, cycloalkyl, aryl, aralkyl, heteroaryl and -(lower alkyl)-heteroaryl; wherein the aryl or heteroaryl is optionally substituted with one to two substituents independently selected from halogen, hydroxy, carboxy, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, trifluoromethyl or phenyl.
In another embodiment of the present invention R3 is selected from the group consisting of lower alkyl (preferably, methyl), halogen substituted lower alkyl (preferably, chloromethyl or trifluoromethyl), —(CH2)0-2—S(O)0-2—R6 and —(CH2)—OC(O)—R6; wherein R6 is selected from the group consisting of lower alkyl (preferably, methyl, ethyl, propyl, isopropyl or butyl), halogen substituted alkyl (preferably, 2,2,2-trifluoroethyl), lower alkenyl, lower alkynyl, phenyl (optionally substituted with one to two substituents independently selected from halogen, hydroxy, carboxy, trifluoromethyl, nitro, amino, (lower alkyl)amino, di(lower alkyl)amino, lower alkyl, lower alkoxy, phenyl, heteroaryl), aralkyl (preferably, benzyl), cycloalkyl (preferably, cyclopentyl or cyclohexyl) and heteroaryl (preferably, thienyl, furyl or pyridyl) (wherein the heteroaryl is optionally substituted with a substitutent selected from lower alkyl).
In an embodiment, R3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —CH2—O-(3-nitrophenyl), —CH2—O-(4-cyanophenyl), —CH2—O-(3-trifluoromethyl-4-cyano-phenyl), —S-methyl, —S-isopropyl, —S-cyclohexyl, S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO2-(4-chlorophenyl), —SO2-(3,4-dichlorophenyl), —CH2—S-methyl, —CH2—S-ethyl, —CH2—S-butyl, —CH2—S-propyl, —CH2—S-isopropyl, —CH2—S-isobutyl, —CH2—S-allyl, —CH2—S-phenyl, —CH2—S-(2-chlorophenyl), —CH2—S-(4-chlorophenyl), —CH2—S-(4-fluorophenyl), —CH2—S-(4-methoxyphenyl), —CH2—S-(4-carboxyphenyl), —CH2—S-(4-hydroxyphenyl), —CH2—S-(4-nitrophenyl), —CH2—S-(4-aminophenyl), —CH2—S-(4-dimethylamino-phenyl), —CH2—S-(3,4-dichlorophenyl), —CH2—S-(2,2,2-trifluoroethyl), —CH2—S-benzyl, —CH2—S-cyclopentyl, —CH2—S-cyclohexyl, —CH2—S-(2-thienyl-methyl), —CH2—S-(2-furyl-methyl), —CH2—S-(2-pyridyl-methyl), —CH2—SO-ethyl, —CH2—SO-phenyl, —CH2—SO-(3,4-dichlorophenyl), —CH2—SO-(2,2,2-trifluoroethyl), —CH2—SO-benzyl, —CH2—SO2-methyl), —CH2—SO2-ethyl, —CH2—SO2-propyl, —CH2—SO2-(4-fluorophenyl), —CH2—SO2-(4-hydroxyphenyl), —CH2—SO2-(4-aminophenyl), —CH2—SO2-(4-dimethylamino-phenyl), —CH2—SO2-(4-methoxyphenyl), —CH2—SO2-(2,2,2-trifluoroethyl), —CH2—SO2-benzyl, —CH2CH2—S-methyl, —CH2CH2—SO-methyl, —CH2CH2—SO2-methyl, —CH2—O—C(O)-(2-chlorophenyl), —CH2—O—C(O)-(3-chlorophenyl), —CH2—O—C(O)-(4-chlorophenyl), —CH2—O—C(O)-(4-fluorophenyl), —CH2—O—C(O)-(4-nitrophenyl), —CH2—O—C(O)-(4-methyl-phenyl), —CH2—O—C(O)-(4-methoxy-phenyl), —CH2—O—C(O)-(2-trifluoro-methyl-phenyl), —CH2—O—C(O)-(4-t-butyl-phenyl), —CH2—O—C(O)-phenyl, —CH2—O—C(O)-(3,4-dichloro-phenyl), —CH2—O—C(O)-(2,6-dichloro-phenyl), —CH2—O—C(O)-(4-dimethyl-amino-phenyl), —CH2—O—C(O)-(4-biphenyl), —CH2—O—C(O)-(2-pyridyl), —CH2—O—C(O)-(3-pyridyl) and —CH2—O—C(O)-(5-chloro-6-benzothienyl).
Preferably, R3 is selected from the group consisting of methyl, chloromethyl, trifluoromethyl, —S-methyl, —S-isopropyl, —S-cyclohexyl, S-phenyl, —S-(4-chlorophenyl), —S-(4-fluorophenyl), —S-(3,4-dichlorophenyl), —S-(4-aminophenyl), —SO2-(4-chlorophenyl), —SO2-(3,4-dichlorophenyl), —CH2—S-methyl, —CH2—S-ethyl, —CH2—S-butyl, —CH2—S-propyl, —CH2—S-isopropyl, —CH2—S-isobutyl, —CH2—S-allyl, —CH2—S-phenyl, —CH2—S-(2-chlorophenyl), —CH2—S-(4-chlorophenyl), —CH2—S-(4-fluorophenyl), —CH2—S-(4-methoxyphenyl), —CH2—S-(4-carboxyphenyl), —CH2—S-(4-hydroxyphenyl), —CH2—S-(4-nitrophenyl), —CH2—S-(4-aminophenyl), —CH2—S-(4-dimethylamino-phenyl), —CH2—S-(3,4-dichlorophenyl), —CH2—S-(2,2,2-trifluoroethyl), —CH2—S-benzyl, —CH2—S-cyclopentyl, —CH2—S-cyclohexyl, —CH2—S-(2-thienyl-methyl), —CH2—S-(2-furyl-methyl), —CH2—S-(2-pyridyl-methyl), —CH2—SO-ethyl, —CH2—SO-phenyl, —CH2—SO-(3,4-dichlorophenyl), —CH2—SO-(2,2,2-trifluoroethyl), —CH2—SO-benzyl, —CH2—SO2-methyl, —CH2—SO2-ethyl, —CH2—SO2-propyl, —CH2—SO2-(4-fluorophenyl), —CH2—SO2-(4-hydroxyphenyl), —CH2—SO2-(4-aminophenyl), —CH2—SO2-(4-dimethylamino-phenyl), —CH2—SO2-(4-methoxyphenyl), —CH2—SO2-(2,2,2-trifluoroethyl), —CH2—SO2-benzyl, —CH2CH2—S-methyl, —CH2CH2—SO-methyl, —CH2CH2—SO2-methyl, —CH2—O—C(O)-(2-chlorophenyl), —CH2—O—C(O)-(3-chlorophenyl), —CH2—O—C(O)-(4-chlorophenyl), —CH2—O—C(O)-(4-fluorophenyl), —CH2—O—C(O)-(4-nitrophenyl), —CH2—O—C(O)-(4-methyl-phenyl), —CH2—O—C(O)-(4-methoxy-phenyl), —CH2—O—C(O)-(2-trifluoro-methyl-phenyl), —CH2—O—C(O)-(4-t-butyl-phenyl), —CH2—O—C(O)-phenyl, —CH2—O—C(O)-(3,4-dichloro-phenyl), —CH2—O—C(O)-(2,6-dichloro-phenyl), —CH2—O—C(O)-(4-dimethyl-amino-phenyl), —CH2—O—C(O)-(4-biphenyl), —CH2—O—C(O)-(2-pyridyl), —CH2—O—C(O)-(3-pyridyl) and —CH2—O—C(O)-(5-chloro-6-benzothienyl).
In an embodiment of the present invention a is 2 and R5 is selected from the group consisting of halogen (preferably, chloro), nitro, cyano and trifluoromethyl. In another embodiment of the present invention b and c are each 0. In another embodiment of the present invention R4 is hydrogen. In another embodiment of the present invention R7 is hydrogen. In another embodiment of the present invention R1 is selected from the group consisting of H and lower alkyl-sulfonyl (preferably, methyl-sulfonyl).
In an embodiment of the present invention
Figure US07282507-20071016-C00024
is a five to six membered, saturated or partically unsaturated ring structure containing one to two heteroatoms selected from O, S or N; wherein the five to six membered, saturated or partially unsaturated ring is optionally substituted with a substituent selected from aralkyl (wherein the aralkyl is optionally substuted with one to two substituents selected independently from the group consisting of halogen, lower alkyl, lower alkoxy, lower alkylsulfonyl and trifluoromethyl), aryl (wherein the aryl is optionally substuted with one to two substituents selected independently from the group consisting of halogen, lower alkyl, lower alkoxy, lower alkylsulfonyl and trifluoromethyl) and aralkyloxy-carbonyl.
Preferably,
Figure US07282507-20071016-C00025
is selected from the group consisting of tetrahydro-thien-3-yl, (S)-tetrahydro-thien-3-yl, (R)-tetrahydro-thien-3-yl, tetrahydro-thiopyran-4-yl, 4-(1-benzyloxy-carbonyl-piperidinyl), 4-(1-benzyl-piperidinyl), 4-piperidinyl, 4-(1-(4-chlorophenyl)-carbonyl-piperidinyl), 4-(1-(4-trifluoromethyl-benzyl)-piperidinyl), 4-(1-(4-methyl-benzyl)-piperidinyl), 4-(1-(4-fluoro-benzyl)-piperidinyl), 4-(1-(3-methoxy-benzyl)-piperidinyl), 4-(1-(4-chloro-benzyl)-piperidinyl), 4-(1-(4-t-butyl-benzyl)-piperidinyl), 4-(1-(4-methylsulfonyl-benzyl)-piperidinyl), 4-(1-(4-methoxy-benzyl)-piperidinyl) and 4-(1-(3,4-dichloro-benzyl)-piperidinyl).
In an embodiment of the present invention
Figure US07282507-20071016-C00026
is pyridyl. In another embodiment of the present invention a R1 is hydrogen. In another embodiment of the present invention a is 1 and R5 is selected from cyano or trifluoromethyl. In another embodiment of the present invention b and c are each 0. In another embodiment of the present invention R2 is lower alkyl (preferably, methyl).
In an embodiment of the present invention R3 is selected from the group consisting of halogenated lower alkyl and -(lower alkyl)-S(O)0-2—R6. Preferably, R3 is selected from the group consisting of chloromethyl and —CH2—S—R6. Preferably, R3 is selected from the group consisting of chloromethyl, —CH2—S-ethyl, —CH2—S-phenyl, —CH2—S-(4-chlorophenyl), —CH2—S-(4-fluorophenyl) and —CH2—S-cyclohexyl.
In an embodiment of the present invention R6 is selected from the group consisting of lower alkyl, cycloalkyl and aryl (wherein the aryl is optionally substituted with a halogen). Preferably, R6 is selected from the group consisting of ethyl, cyclohexyl, phenyl, 4-chlorophenyl and 4-fluorophenyl.)
In an embodiment of the present invention are compounds of formula (I) wherein R1 is selected from hydrogen or methyl-sulfonyl, R4 is selected from hydrogen, halogen, cyano, —CH═CH2, —CCH or —CC—Si(CH3)3 (preferably, R4 is selected from hydrogen, halogen or cyano, more preferably, R4 is hydrogen or halogen), R7 is hydrogen, R2 and R3 are each methyl, b is 0, c is 0, a is an integer from 1 to 2, each R5 is independently selected from halogen (preferably, bromo or chloro), cyano, nitro and trifluoromethyl and the R5 groups are bound at the 5 and 6 positions.
Additional embodiments of the present invention, include those wherein the substituents selected for one or more of the variables defined herein (i.e.
Figure US07282507-20071016-C00027
a, b, c, X, Y, R2, R3, R4, R5 and R7) are independently selected to be any individual substituent or any subset of substituents selected from the complete list as defined herein.
In an embodiment of the present invention, the stereoconfiguration at the carbon atom bound to R2, R3 and —(CH2)c—OR7 (i.e. the starred (*) carbon atom in the Tables below) is in the (+) configuration. In another embodiment of the present invention, the stereoconfiguration at the carbon atom bound to R2, R3 and —(CH2)c—OR7 (i.e. the starred (*) carbon atom in the Tables below) is in the (−) configuration.
Representative compounds of the present invention are as listed in Tables 1, 2, 3, 4 and 5 below. In Tables 2, 3, 4 and 5 the column headed with the “*” symbol denotes the stereo-configuration of the tertiary carbon. The “+” and “−” configurations are based on experimental determination. (The absolute configuration may or may not have been determined.) A notation of “±” indicates a mixture of configurations. A notation of “n/a” indicates that no stereo-center was present. Unless otherwise noted, for compounds listed below wherein R2 contains an —SO— group, said chiral center was present as a mixture of configurations.
TABLE 1
Compounds of Formula (II)
Figure US07282507-20071016-C00028
IDNo R1
Figure US07282507-20071016-C00029
 		(R5)a
14 H tetrahydro-thien-3-yl 5-chloro, 6-CF3
15 H tetrahydro-thien-3-yl 5-cyano, 6-CF3
16 methyl-sulfonyl tetrahydro-thiopyran-4-yl 5-nitro, 6-CF3
17 H tetrahydro-thiopyran-4-yl 5-nitro, 6-CF3
18 H tetrahydro-thien-3-yl 5-nitro, 6-CF3
19 methyl-sulfonyl 4-(1-benzyloxy-carbonyl- 5-chloro, 6-CF3
piperidinyl)
20 H 4-(1-benzyloxy-carbonyl- 5-chloro, 6-CF3
piperidinyl)
21 methyl-sulfonyl 4-(1-benzyl-piperidinyl) 5-chloro, 6-CF3
22 H 4-(1-benzyl-piperidinyl) 5-chloro, 6-CF3
23 methyl-sulfonyl 4-piperidinyl 5-chloro, 6-CF3
24 methyl-sulfonyl 4-(1-(4-chlorophenyl)-carbonyl- 5-chloro, 6-CF3
piperidinyl)
25 H 4-(1-(4-chlorophenyl)-carbonyl- 5-chloro, 6-CF3
piperidinyl)
26 H 4-(1-(4-trifluoromethyl-benzyl)- 5-nitro, 6-CF3
piperidinyl)
27 H 4-(1-(4-methyl-benzyl)- 5-nitro, 6-CF3
piperidinyl)
28 H 4-(1-(4-fluoro-benzyl)- 5-chloro, 6-CF3
piperidinyl)
29 H 4-(1-(3-methoxy-benzyl)- 5-chloro, 6-CF3
piperidinyl)
30 H 4-(1-(4-methyl-benzyl)- 5-chloro, 6-CF3
piperidinyl)
31 H 4-(1-(4-chloro-benzyl)- 5-chloro, 6-CF3
piperidinyl)
32 H 4-(1-(4-t-butyl-benzyl)- 5-chloro, 6-CF3
piperidinyl)
33 H 4-(1-(4-trifluoromethyl-benzyl)- 5-chloro, 6-CF3
piperidinyl)
34 H 4-(1-(4-methylsulfonyl-benzyl)- 5-chloro, 6-CF3
piperidinyl)
35 H 4-(1-(4-methoxy-benzyl)- 5-chloro, 6-CF3
piperidinyl)
36 H 4-(1-(3,4-dichloro-benzyl)- 5-chloro, 6-CF3
piperidinyl)
37 H 4-(1-(4-fluoro-benzyl)- 5-nitro, 6-CF3
piperidinyl)
38 H 4-(1-(3-methoxy-benzyl)- 5-nitro, 6-CF3
piperidinyl)
39 H 4-(1-(3-methoxy-benzyl)- 5-nitro, 6-CF3
piperidinyl)
40 H 4-(1-(4-chloro-benzyl)- 5-nitro, 6-CF3
piperidinyl)
41 H 4-(1-(4-chloro-benzyl)- 5-nitro, 6-CF3
piperidinyl)
42 H 4-(1-(4-methyl-benzyl)- 5-nitro, 6-CF3
piperidinyl
43 H 4-(1-(3,4-dichloro-benzyl)- 5-nitro, 6-CF3
piperidinyl)
TABLE 2
Compounds of Formula (I)
Figure US07282507-20071016-C00030
ID No * R1 R2 R3 R4 (R5)a
13 na H —CH2—S— —CH2—S—ethyl H 5-nitro, 6-
ethyl CF3
47 ± H methyl —CH2CH2—S— H 5-nitro, 6-
methyl CF3
48 ± methyl- methyl —CH2CH2—S— H 5-nitro, 6-
sulfonyl methyl CF3
49 ± H methyl —CH2CH2—SO2— H 5-nitro, 6-
methyl CF3
50 ± H methyl —CH2CH2—SO— H 5-nitro, 6-
methyl CF3
51 ± H methyl —CH2CH2—S— H 5-chloro,
methyl 6-CF3
52 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(2,6-dichloro- CF3
phenyl)
53 ± H methyl —CH2—O—C(O)— H 5-chloro
(4-chloro-
phenyl)
54 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(2-chloro- CF3
phenyl)
55 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-chloro- CF3
phenyl)
56 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(3,4-dichloro- CF3
phenyl)
57 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(2-trifluoro- CF3
methyl-phenyl)
58 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(3- CF3
chlorophenyl)
59 ± H methyl —CH2—O—C(O)— H 5-amino,
(2-trifluoro- 6-CF3
methyl-phenyl)
60 ± H methyl —CH2—O—C(O)— H 5-CF3—
(2-trifluoro- C(O)NH—,
methyl-phenyl) 6-CF3
61 ± H methyl —CH2—O—C(O)— H 5-chloro,
phenyl 6-CF3
62 ± H methyl —CH2—O—C(O)— H 5-chloro,
(4-chloro- CF3
phenyl)
63 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-nitrophenyl) CF3
64 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
phenyl CF3
65 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-methoxy- CF3
phenyl)
66 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-biphenyl) CF3
67 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-dimethyl- CF3
amino-phenyl)
68 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(2-pyridyl) CF3
69 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-methyl- CF3
phenyl)
70 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(5-chloro-6- CF3
benzothienyl)
75 ± H methyl —CH2—O—C(O)— H 5-cyano, 6-
phenyl CF3
76 ± H methyl —CH2—O—C(O)— H 5-cyano, 6-
(4-chloro- CF3
phenyl)
77 ± H methyl —CH2—O—C(O)— H 5-cyano, 6-
(4-fluorophenyl) CF3
78 ± H methyl —CH2—O—C(O)— H 5-cyano, 6-
(3,4-dichloro- CF3
phenyl)
79 ± H methyl —CH2—O—C(O)— H 5-cyano, 6-
(3-pyridyl) CF3
80 ± H methyl —CH2—O—C(O)— H 5-nitro, 6-
(4-t-butyl- CF3
phenyl)
81 ± methyl- methyl —CH2—S—phenyl H 5-methoxy-
sulfonyl carbonyl
82 ± H methyl —CH2—S—(4- H 5-chloro,
chlorophenyl) 6-CF3
83 ± H methyl —CH2—S—(4- H 5-chloro,
fluorophenyl) 6-CF3
84 ± H methyl —CH2—S—(2- H 5-chloro,
chlorophenyl) 6-CF3
85 ± H methyl —CH2—SO2—(4- H 5-chloro,
fluorophenyl) 6-CF3
86 ± methyl- methyl —CH2—S—(3,4- H 5-chloro,
sulfonyl dichlorophenyl) 6-CF3
87 ± H methyl —CH2—S—(3,4- H 5-nitro, 6-
dichlorophenyl) CF3
88 ± methyl- methyl —CH2—S—(4- H a = 0
sulfonyl chlorophenyl)
89 ± H methyl —CH2—S—(4- H a = 0
chlorophenyl)
90 ± methyl- methyl —CH2—S—phenyl H a = 0
sulfonyl
91 ± methyl- methyl —CH2—S—(3,4- H 5-nitro, 6-
sulfonyl dichlorophenyl) CF3
92 ± H methyl —CH2—S— H 5-cyano, 6-
cyclohexyl CF3
93 ± methyl- methyl —CH2—S— H 5-methoxy-
sulfonyl cyclohexyl carbonyl
94 ± H methyl —CH2—S— H 5-methoxy-
cyclohexyl carbonyl
95 ± H methyl —CH2—S—phenyl H 5-cyano, 6-
CF3
96 ± H methyl —CH2—S—(4- H 5-cyano, 6-
chlorophenyl) CF3
97 ± H methyl —CH2—S—(4- H 5-methoxy-
chlorophenyl) carbonyl
98 ± methyl- methyl —CH2—S—(4- H 5-methoxy-
sulfonyl fluorophenyl) carbonyl
99 ± methyl- methyl —CH2—S—(4- H 5-chloro
sulfonyl fluorophenyl)
100 ± H methyl —CH2—S—(4- H 5-chloro
fluorophenyl)
101 ± methyl- methyl —CH2—S—(4- H 5-chloro
sulfonyl chlorophenyl)
102 ± H methyl —CH2—S—(4- H 5-chloro
chlorophenyl)
103 ± H methyl —CH2—S—(4- H 5-nitro, 6-
nitrophenyl) CF3
104 ± H methyl —CH2—S—(4- H 5-chloro,
aminophenyl) 6-CF3
105 ± H methyl —CH2—S—(3,4- H 5-chloro,
dichlorophenyl) 6-CF3
106 ± H methyl —CH2—S—phenyl H 5-chloro,
6-CF3
107 ± methyl- methyl —CH2—S—(4- H a = 0
sulfonyl fluorophenyl)
108 ± H methyl —CH2—S—(4- H a = 0
fluorophenyl)
109 ± H methyl —CH2—S—(4- H 5-cyano, 6-
fluorophenyl) CF3
110 ± H methyl —CH2—SO2—(4- H 5-cyano, 6-
fluorophenyl) CF3
111 ± H methyl —CH2—SO— H 5-chloro,
phenyl) 6-CF3
112 ± H methyl —CH2—SO— H 5-chloro,
phenyl 6-CF3
113 (b) H methyl —CH2—SO—(4- H 5-chloro,
fluorophenyl) 6-CF3
114 (b) H methyl —CH2—SO—(4- H 5-chloro,
fluorophenyl) 6-CF3
115 ± H methyl —CH2—SO— H 5-chloro,
phenyl 6-CF3
116 (b) H methyl —CH2—SO—(3,4- H 5-chloro,
dichlorophenyl) 6-CF3
117 (b) H methyl —CH2—SO—(3,4- H 5-chloro,
dichlorophenyl) 6-CF3
118 ± H methyl —CH2—SO2—(4- H 5-chloro,
aminophenyl) 6-CF3
119 ± methyl- methyl —CH2—S—(4- H 5-chloro,
sulfonyl hydroxyphenyl) 6-CF3
120 ± H methyl —CH2—S—(4- H 5-chloro,
hydroxyphenyl) 6-CF3
121 ± H methyl —CH2—SO2—(4- H 5-chloro,
hydroxyphenyl) 6-CF3
122 ± H methyl —CH2—S—(4- H 5-chloro,
nitrophenyl) 6-CF3
123 ± H methyl —CH2—S—(2- H 5-chloro,
aminophenyl) 6-CF3
124 ± H methyl —CH2—S—(4- H 5-chloro,
dimethylamino- 6-CF3
phenyl)
125 ± methyl- methyl —CH2—S—(4- H 5-chloro,
sulfonyl aminophenyl) 6-CF3
126 ± H methyl —CH2—SO2—(4- H 5-chloro,
dimethylamino- 6-CF3
phenyl)
127 ± H methyl —CH2—S—(2- H 5-chloro,
dimethylamino- 6-CF3
phenyl)
128 ± methyl- methyl —CH2—SO2—(4- H 5-chloro,
sulfonyl methoxyphenyl) 6-CF3
129 ± H methyl —CH2—SO2—(4- H 5-chloro,
methoxyphenyl) 6-CF3
130 ± methyl- methyl —CH2—S—(4- H 5-chloro,
sulfonyl methoxyphenyl) 6-CF3
131 ± H methyl —CH2—S—(4- H 5-chloro,
methoxyphenyl) 6-CF3
132 ± methyl- methyl —CH2—S—(4- H 5-chloro,
sulfonyl carboxyphenyl) 6-CF3
133 ± H methyl —CH2—S—(4- H 5-chloro,
carboxyphenyl) 6-CF3
134 ± methyl- methyl —CH2—S—methyl H 5-chloro,
sulfonyl 6-CF3
135 ± H methyl —CH2—S—methyl H 5-chloro,
6-CF3
136 ± H methyl —CH2—S—methyl H 5-cyano, 6-
CF3
137 ± methyl- methyl —CH2—SO2— H 5-chloro,
sulfonyl methyl 6-CF3
138 ± H methyl —CH2—SO2— H 5-chloro,
methyl 6-CF3
139 ± H methyl —CH2—S—methyl H 5-nitro, 6-
CF3
140 ± H methyl —CH2—SO2— H 5-nitro, 6-
methyl CF3
141 ± methyl- methyl —CH2—S—ethyl H 5-nitro, 6-
sulfonyl CF3
142 ± H methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
143 ± H methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
144 + H methyl —CH2—S—methyl H 5-nitro, 6-
CF3
145 − H methyl —CH2—S—methyl H 5-nitro, 6-
CF3
146 ± methyl- methyl —CH2—S—ethyl H 5-chloro,
sulfonyl 6-CF3
147 + H methyl —CH2—SO2— H 5-nitro, 6-
methyl CF3
148 − H methyl —CH2—SO2— H 5-nitro, 6-
methyl CF3
149 + H methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
150 − H methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
151 −(a) H methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
152 ± H methyl —CH2—S—ethyl H 5-chloro,
6-CF3
153 ± H methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
154 ± methyl- methyl —CH2—S—ethyl H 5-chloro
sulfonyl
155 −(a) H methyl —CH2—SO—ethyl H 5-nitro, 6-
CF3
156 +(a) H methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
157 ± methyl- H —CH2—S—ethyl H 5-nitro, 6-
sulfonyl CF3
158 ± H H —CH2—S—ethyl H 5-nitro, 6-
CF3
159 ± H methyl —CH2—S—ethyl H 5-fluoro, 6-
CF3
160 ± H methyl —CH2—S—benzyl H 5-nitro, 6-
CF3
161 ± H methyl —CH2—SO—benzyl H 5-nitro, 6-
CF3
162 ± H methyl —CH2—SO2— H 5-nitro, 6-
benzyl CF3
163 ± H methyl —CH2—S— H 5-nitro, 6-
isopropyl CF3
164 ± H methyl —CH2—S— H 5-nitro, 6-
isopropyl CF3
165 ± methyl methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
166 ± H methyl —CH2—S—ethyl H 5-amino,
6-CF3
168 ± H methyl —CH2—S—n-propyl H 5-nitro, 6-
CF3
169 ± H ethyl —CH2—S—ethyl H 5-nitro, 6-
CF3
170 ± H methyl —CH2—S—isobutyl H 5-nitro, 6-
CF3
171 ± H methyl —CH2—S—(2,2,2- H 5-nitro, 6-
trifluoroethyl) CF3
172 ± methyl- methyl —CH2—S—(2,2,2- H 5-nitro, 6-
sulfonyl trifluoroethyl) CF3
173 ± H methyl —CH2—S— H 5-nitro, 6-
cyclopentyl CF3
174 ± methyl- methyl —CH2—S— H 5-nitro, 6-
sulfonyl cyclopentyl CF3
175 ± H methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
176 ± H ethyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
177 ± H methyl —CH2—SO2—n- H 5-nitro, 6-
propyl CF3
178 ± H methyl —CH2—S—ethyl H a = 0
180 ± H H —CH2—SO—ethyl H 5-nitro, 6-
CF3
181 ± H ethyl —CH2—S—ethyl H 5-chloro,
6-CF3
182 ± methyl- ethyl —CH2—S—(2,2,2- H 5-nitro, 6-
sulfonyl trifluoroethyl) CF3
183 ± methyl- methyl —CH2—S—(2- H 5-nitro, 6-
sulfonyl thienyl-methyl) CF3
184 ± methyl- methyl —CH2—S—allyl H 5-nitro, 6-
sulfonyl CF3
185 ± H ethyl —CH2—S—(2,2,2- H 5-nitro, 6-
trifluoroethyl) CF3
186 ± methyl- ethyl —CH2—S—(2,2,2- H 5-chloro,
sulfonyl trifluoroethyl) 6-CF3
187 ± methyl- methyl —CH2—S—(2,2,2- H 5-chloro,
sulfonyl trifluoroethyl) 6-CF3
188 ± methyl- methyl —CH2—S—(2,2,2- H 5-fluoro, 6-
sulfonyl trifluoroethyl) CF3
189 ± H methyl —CH2—S—(2,2,2- H 5-fluoro, 6-
trifluoroethyl) CF3
190 ± H methyl —CH2—S—(2,2,2- H 5-chloro,
trifluoroethyl) 6-CF3
191 ± H ethyl —CH2—SO2— H 5-nitro, 6-
(2,2,2- CF3
trifluoroethyl)
192 ± H ethyl —CH2—S—(2,2,2- H 5-chloro,
trifluoroethyl) 6-CF3
193 ± methyl- ethyl —CH2—S—(2,2,2- H 5-fluoro, 6-
sulfonyl trifluoroethyl) CF3
194 ± H ethyl —CH2—S—(2,2,2- H 5-fluoro, 6-
trifluoroethyl) CF3
195 ± methyl- methyl —CH2—S—n-butyl H 5-nitro, 6-
sulfonyl CF3
196 ± H methyl —CH2—S—propyl H 5-chloro,
6-CF3
197 ± H methyl —CH2—S—(2- H 5-nitro, 6-
thienyl-methyl) CF3
198 ± H methyl —CH2—S—(2-furyl- H 5-nitro, 6-
methyl) CF3
199 ± H ethyl —CH2—SO2— chloro 5-nitro, 6-
(2,2,2- CF3
trifluoroethyl)
200 ± H methyl —CH2—S—n-butyl H 5-nitro, 6-
CF3
201 + H methyl —CH2—S—(2,2,2- H 5-nitro, 6-
trifluoroethyl) CF3
202 − H methyl —CH2—S—(2,2,2- H 5-nitro, 6-
trifluoroethyl) CF3
203 ± methyl- methyl —CH2—S—ethyl H 5-fluoro, 6-
sulfonyl chloro
204 ± H methyl —CH2—S—(2- H 5-nitro, 6-
pyridyl-methyl) CF3
205 ± H methyl —CH2—SO—(2,2,2- H 5-nitro, 6-
trifluoroethyl) CF3
206 ± H methyl —CH2—S—ethyl H 5-fluoro, 6-
CF3
207 ± H methyl —CH2—SO2— chloro 5-CF3, 6-
(2,2,2- nitro
trifluoroethyl)
208 ± H methyl —CH2—SO2— H 5-nitro, 6-
(2,2,2- CF3
trifluoroethyl)
209 ± H methyl —CH2—S—ethyl H 5-cyano, 6-
CF3
210 ± H methyl —CH2—S—(4- H 5-chloro,
aminophenyl) 6-CF3
211 ± H methyl —CH2—S—(2,2,2- H 5-cyano, 6-
trifluoroethyl) CF3
212 ± H methyl —CH2—S—ethyl H 5-nitro, 7-
CF3
213 ± H methyl —CH2—S—(2,2,2- iodo 5-nitro, 6-
trifluoroethyl) CF3
214 ± methyl- methyl —CH2—S—ethyl H 6-CF3
sulfonyl
215 ± methyl- methyl —CH2—S—ethyl H 5-cyano, 6-
sulfonyl CF3
216 ± methyl- ethyl —CH2—S—ethyl H 5-nitro, 6-
sulfonyl CF3
217 ± H methyl —CH2—S—ethyl H 5-cyano, 6-
CF3
218 + H methyl —CH2—S—ethyl H 5-cyano, 6-
CF3
219 ± H methyl —CH2—S—ethyl methyl 5-cyano, 6-
CF3
220 ± H methyl —CH2—S—ethyl H 5-bromo,
6-CF3
221 ± H methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
222 − H methyl —CH2—SO2—ethyl H 5-cyano, 6-
CF3
223 ± H ethyl —CH2—S—ethyl H 5-cyano, 6-
CF3
224 ± H methyl —CH2—S—ethyl H 5-cyano, 6-
chloro
225 − H methyl —CH2—S—ethyl H 5-cyano, 6-
chloro
226 ± methyl methyl —CH2—S—ethyl H 5-cyano, 6-
chloro
227 − H methyl —CH2—S—ethyl H 5,6-
dichloro
228 + H methyl —CH2—S—ethyl H 5-chloro,
6-cyano
229 ± methyl- methyl —CH2—S—benzyl H 5-nitro, 6-
sulfonyl CF3
230 ± H methyl —CH2—SO—ethyl H 5-CF3, 6-
nitro
231 −(a) methyl methyl —CH2—S—ethyl H 5-nitro, 6-
CF3
232 −(a) methyl methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
233 − H methyl —CH2—S—ethyl methyl 5-cyano, 6-
CF3
234 + H methyl —CH2—S—ethyl methyl 5-cyano, 6-
CF3
236 ± methyl methyl —CH2—S—ethyl H 5-cyano, 6-
CF3
237 ± 2,2,2- methyl —CH2—S—ethyl H 5-cyano, 6-
trifluoro- CF3
ethyl
238 ± methyl- methyl —CH2—S—(2-furyl H 5-nitro, 6-
sulfonyl methyl) CF3
239 ± methyl- methyl —CH2—S—propyl H 5-chloro,
sulfonyl 6-CF3
240 ± methyl methyl —CH2—SO2—ethyl H 5-cyano, 6-
CF3
241 +(a) H methyl —CH2—S—ethyl iodo 5-nitro, 6-
CF3
242 +(a) H methyl —CH2—S—ethyl cyano 5-nitro, 6-
CF3
243 ± ethyl methyl —CH2—S—ethyl H 5-cyano, 6-
CF3
244 −(a) H methyl —CH2—S—ethyl iodo 5-nitro, 6-
CF3
245 ± H methyl —CH2—SO—ethyl methyl 5-cyano, 6-
CF3
246 ± H methyl —CH2—SO2—ethyl methyl 5-cyano, 6-
CF3
247 − H methyl —CH2—S—ethyl cyano 5-nitro, 6-
CF3
248 −(a) H methyl —CH2—SO—ethyl H 5-cyano, 6-
CF3
250 −(a) methyl methyl —CH2—SO2—ethyl H 5-nitro, 6-
CF3
251 − H methyl —CH2—SO2—ethyl methyl 5-cyano, 6-
CF3
252 −(a) H methyl —CH2—SO2—ethyl methyl 5-cyano, 6-
CF3
254 ± H methyl —S—(3,4- H 5-nitro, 6-
dichlorophenyl) CF3
255 ± H methyl —SO2—(3,4- H 5-nitro, 6-
dichlorophenyl) CF3
256 ± H methyl —S—cyclohexyl H 5-nitro, 6-
CF3
257 ± H methyl —S—cyclohexyl H 5-cyano, 6-
CF3
258 ± H methyl —S—phenyl H 5-nitro, 6-
CF3
259 ± H methyl —S—(4- H 5-nitro, 6-
chlorophenyl) CF3
260 ± H methyl —S—(4- H 5-nitro, 6-
fluorophenyl) CF3
261 ± H methyl —S—(4- H 5-cyano, 6-
chlorophenyl) CF3
262 ± H methyl —SO2—(4- H 5-cyano, 6-
chlorophenyl) CF3
265 ± H methyl —S—(4- H 5-chloro,
aminophenyl) 6-CF3
266 ± H methyl —S—(4- H 5-nitro, 6-
aminophenyl) CF3
267 ± H methyl —S—methyl H 5-nitro, 6-
CF3
273 na methyl- methyl methyl H 5-nitro, 6-
sulfonyl CF3
274 na H methyl methyl H 5-nitro, 6-
CF3
275 na H methyl methyl chloro 5-nitro, 6-
CF3
276 na H methyl methyl iodo 5-nitro, 6-
CF3
277 na H methyl methyl bromo 5-nitro, 6-
CF3
278 na H methyl methyl iodo 5-cyano, 6-
CF3
279 na H methyl methyl iodo 5-chloro,
6-CF3
280 na H methyl methyl bromo 5-chloro,
6-CF3
281 na H methyl methyl —CH═CH2 5-nitro, 6-
CF3
282 na H methyl methyl chloro 5-chloro,
6-CF3
283 na methyl- methyl methyl H 5-cyano, 6-
sulfonyl CF3
284 na methyl- methyl methyl H 5-chloro,
sulfonyl 6-CF3
285 na H methyl methyl H 5-chloro,
6-CF3
286 na H methyl methyl H 5-cyano, 6-
CF3
287 na H methyl methyl chloro 5-cyano, 6-
CF3
288 na H methyl methyl bromo 5-cyano, 6-
CF3
289 na H methyl methyl methyl 5-cyano, 6-
CF3
290 na H methyl methyl methyl 5-nitro, 6-
CF3
291 na H methyl methyl cyano 5-nitro, 6-
CF3
292 na methyl- methyl methyl H 5-bromo,
sulfonyl 6-CF3
293 na methyl- methyl methyl H 5-bromo
sulfonyl
294 na H methyl methyl H 5-bromo
295 na H methyl methyl cyano 5-cyano, 6-
CF3
316 ± methyl- methyl —CH2—S—ethyl H 5-bromo
sulfonyl
317 −(a) methyl methyl —CH2—S—ethyl methyl 5-cyano, 6-
CF3
318 −(a) methyl methyl —CH2—S—ethyl methyl 5-cyano, 6-
CF3
319 na H methyl —CH2—SO—ethyl methyl 5-cyano, 6-
CF3
320 ± methyl- methyl —CH2—S—ethyl H 5-(3-
sulfonyl chloro-
phenyl)
321 ± H methyl —CH2—S—ethyl H 5-(3-
chloro-
phenyl)
322 ± methoxy- methyl —CH2—S—ethyl H 5-cyano, 6-
methyl CF3
323 ± cyano- methyl —CH2—S—ethyl H 5-cyano, 6-
methyl CF3
324 ± H methyl —CH2—S—ethyl iodo 5-cyano, 6-
CF3
325 ± H methyl —CH2—S—ethyl —CC— 5-cyano, 6-
Si(CH3)3 CF3
326 ± H methyl —CH2—S—ethyl —CCH 5-cyano, 6-
CF3
327 ± H trifluoro- —CH2—S—ethyl H 5-cyano, 6-
methyl CF3
328 ± methoxy- H trifluoromethyl H 5-cyano, 6-
methyl CF3
329 ± H methyl trifluoromethyl H 5-cyano, 6-
CF3
330 ± H methyl trifluoromethyl iodo 5-cyano, 6-
CF3
331 ± cyano- methyl trifluoromethyl H 5-cyano, 6-
methyl CF3
332 ± methoxy- methyl trifluoromethyl H 5-cyano, 6-
methyl CF3
333 ± methyl- methyl trifluoromethyl H 5-cyano, 6-
thio- CF3
methyl
334 + H methyl trifluoromethyl H 5-cyano, 6-
CF3
335 − H methyl trifluoromethyl H 5-cyano, 6-
CF3
344 ± H methyl —CH2S—ethyl ethyl 5-cyano, 6-
CF3
345 −(a) H methyl trifluoromethyl chloro 5-cyano, 6-
CF3
346 −(a) H methyl trifluoromethyl iodo 5-cyano, 6-
CF3
347 −(a) H methyl trifluoromethyl —CC— 5-cyano, 6-
Si(CH3)3 CF3
348 −(a) H methyl trifluoromethyl —CCH 5-cyano, 6-
CF3
349 −(a) H methyl —CH2S—ethyl iodo 5-cyano, 6-
CF3
350 −(a) H methyl —CH2S—ethyl —CC— 5-cyano, 6-
Si(CH3)3 CF3
351 −(a) H methyl —CH2S—ethyl —CCH 5-cyano, 6-
CF3
352 −(a) H methyl —CH2S—ethyl ethyl 5-cyano, 6-
CF3
353 ± H methyl —CH2S—ethyl H 5-chloro
354 −(a) H methyl —CH2SO2—ethyl ethyl 5-cyano, 6-
CF3
355 na H methyl methyl —CCH 5-cyano, 6-
CF3
356 na H methyl methyl —CC— 5-cyano, 6-
Si(CH3)3 CF3
357 na H trifluoro- trifluoromethyl H 5-cyano, 6-
methyl CF3
358 na methyl- trifluoro- trifluoromethyl H 5-cyano, 6-
sulfonyl methyl CF3
394 ± H H —CH2Cl H 5-cyano, 6-
CF3
397 +(a) H methyl —CH2SO2—ethyl H 5-cyano, 6-
CF3
398 +(a) H methyl —CH2S—ethyl iodo 5-cyano, 6-
CF3
401 +(a) H methyl —CH2S—ethyl bromo 5-cyano, 6-
CF3
402 ± methyl- methyl —CH2S—ethyl H 5-cyano
sulfonyl
403 ± H methyl —CH2S—ethyl H 5-cyano
404 ± H methyl —CH2SO2—ethyl H 5-chloro, 6-
CF3
405 na H methyl methyl H 5,6-
dichloro
406 ± H methyl —CH2S—ethyl chloro 5-chloro
407 ± H methyl —CH2SO2—ethyl H 5-cyano, 6-
CF3
408 ± H H —CH2S—methyl H 5-cyano, 6-
CF3
409 na H methyl methyl —CH═CH2 5-chloro,
6-CF3
410 ± H H —CH2S—ethyl H 5-cyano, 6-
CF3
411 ± H H —CH2S—ethyl iodo 5-cyano, 6-
CF3
412 ± H H —CH2SO2—ethyl H 5-cyano, 6-
CF3
413 ± H H —CH2S—ethyl bromo 5-cyano, 6-
CF3
414 ± H methyl —CH2S—ethyl H 5-methyl
6-CF3
415 ± H methyl —CH2S—ethyl H 5-cyano, 6-
methyl, 7-
iodo
426 ± H methyl —CH2O—(4- H 5-cyano, 6-
cyano-phenyl) CF3
428 ± H methyl —CH2O—(3-nitro- H 5-cyano, 6-
phenyl) CF3
429 ± H methyl —CH2O—(3-CF3— H 5-cyano, 6-
4-cyano- CF3
phenyl)
436 ± H methyl trifluoroethyl H 5-cyano, 6-
CF3
445 ± H methyl —CH2S—ethyl H 5-cyano, 6-
methoxy
446 ± H methyl —CH2S—ethyl H 5-cyano, 6-
methyl
  • (a) The stereo-configuration for these compounds was not experimentally determined. However, the compounds were made from stereospecific precursors. More specifically, compounds #151, 155, 195, 231, 232, 242, 247 and 250 were prepared from compound #150; compounds #156 and 241 were prepared from compound #149; compounds #248, 249, 349, 350, 351, 353 and 354 were prepared from compound #217; compound #252, 397, 398 and 401 were prepared from compound #233; compound #345, 346, 347 and 348 were prepared from compound #355. The listed stereo-configuration os therefore based on the stere-configuration of the precursor.
  • (b) Compounds #113, 114, 116 and 117 were prepared with a single configuration at the S of the SO group, although relative and absolute configurations were not determined.
TABLE 3
Compounds of Formula (I)
Figure US07282507-20071016-C00031
ID No * R1 R2 R3 R4 (R5)a
253 ± H methyl —S—(4- H 5-chloro, 6-CF3
chlorophenyl)
268 ± H methyl —S—isopropyl H 5-nitro, 6-CF3
TABLE 4
Compounds of Formula (I)
Figure US07282507-20071016-C00032
ID No * R6 (R5)a
8 ± 4-chlorophenyl 5-nitro, 6-CF3
9 ± ethyl 5-nitro, 6-CF3
TABLE 4
Compounds of Formula (III)
Figure US07282507-20071016-C00033
ID No * R6 (R5)a
1 ± cyclohexyl 5-CF3
2 ± phenyl 5-CF3
3 ± 4-chlorophenyl 5-CF3
5 ± 4-fluorophenyl 5-CF3
6 ± ethyl 5-cyano
Additional representative compounds of the present invention are as listed in Table 6 below.
TABLE 6
Figure US07282507-20071016-C00034
(#4)
Figure US07282507-20071016-C00035
(#7)
Figure US07282507-20071016-C00036
(#10)
Figure US07282507-20071016-C00037
(#11)
Figure US07282507-20071016-C00038
(#167)
Figure US07282507-20071016-C00039
(#235)
Figure US07282507-20071016-C00040
(#269)
Figure US07282507-20071016-C00041
(#270)
Figure US07282507-20071016-C00042
(#271)
As used herein, unless otherwise noted, the term “halogen” shall mean chlorine, bromine, fluorine and iodine.
As used herein, unless otherwise noted, the term “alkyl”, whether used alone or as part of a substituent group, includes straight and branched chains. For example, alkyl radicals include methyl, ethyl, propyl, isopropyl, butyl, isobutyl, sec-butyl, t-butyl, pentyl and the like. Unless otherwise noted, “lower” when used with alkyl means a carbon chain composition of 1-4 carbon atoms.
As used herein, unless otherwise noted, the term “halogen substituted lower alkyl” shall mean a lower alkyl group as defined above wherein one or more of the hydrogen atoms is replaced with a halogen atom. Suitable examples include, but are not limited to, trifluoromethyl, 2,2,2-trifluoro-eth-1-yl, chloromethyl, fluoromethyl and the like. Similarly, the term “fluorinated lower alkyl” shall mean a lower alkyl group as defined above wherein one or more of the hydrogen atoms is replaced with a fluorine atom. Suitable examples include, but are not limited to, fluoromethyl, fluoroethyl, trifluoromethyl, 2,2,2-trifluoro-eth-1-yl, and the like.
As used herein, unless otherwise noted, “alkoxy” shall denote an oxygen ether radical of the above described straight or branched chain alkyl groups. For example, methoxy, ethoxy, n-propoxy, sec-butoxy, t-butoxy, n-hexyloxy and the like.
As used herein, unless otherwise noted, the term “cycloalkyl” shall mean any stable four to eight membered monocyclic, saturated ring system, for example cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl and cyclooctyl.
As used herein, unless otherwise noted, “aryl” shall refer to unsubstituted carbocylic aromatic groups such as phenyl, naphthyl, and the like.
As used herein, unless otherwise noted, “heteroaryl” shall denote any five or six membered, monocyclic aromatic ring structure containing at least one heteroatom selected from the group consisting of O, N and S, optionally containing one to three additional heteroatoms independently selected from the group consisting of O, N and S; or a nine or ten membered, bicyclic aromatic ring structure containing at least one heteroatom selected from the group consisting of O, N and S, optionally containing one to four additional heteroatoms independently selected from the group consisting of O, N and S. The heteroaryl group may be attached at any heteroatom or carbon atom of the ring such that the result is a stable structure.
Examples of suitable heteroaryl groups include, but are not limited to, pyrrolyl, furyl, thienyl, oxazolyl, imidazolyl, purazolyl, isoxazolyl, isothiazolyl, triazolyl, thiadiazolyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, pyranyl, furazanyl, indolizinyl, indolyl, isoindolinyl, indazolyl, benzofuryl, benzothienyl, benzimidazolyl, benzthiazolyl, purinyl, quinolizinyl, quinolinyl, isoquinolinyl, isothiazolyl, cinnolinyl, phthalazinyl, quinazolinyl, quinoxalinyl, naphthyridinyl, pteridinyl, and the like.
As used herein, the notation “*” shall denote the presence of a stereogenic center.
When a particular group is “substituted” (e.g., cycloalkyl, aryl, heteroaryl, etc), that group may have one or more substituents, preferably from one to five substituents, more preferably from one to three substituents, most preferably from one to two substituents, independently selected from the list of substituents.
With reference to substituents, the term “independently” means that when more than one of such substituents is possible, such substituents may be the same or different from each other.
Under standard nomenclature used throughout this disclosure, the terminal portion of the designated side chain is described first, followed by the adjacent functionality toward the point of attachment. Thus, for example, a “phenyl-(C1-C6alkyl)-aminocarbonyl-(C1-C6alkyl)” substituent refers to a group of the formula
Figure US07282507-20071016-C00043
Under the standard nomenclature used throughout this disclosure, substituents on the core will be designated such that the X (or Y) atom is numbered 1 and the remaining ring atoms are numbered sequentially in a counterclockwise direction. For example, for compounds of formula (I), the substituents on the core shall be designated as bound at the following positions of attachment:
Figure US07282507-20071016-C00044
Abbreviations used in the specification, particularly the Schemes and Examples, are as follows:
AR = Androgen Receptor
BPH = Benign Prostatic Hyperplasia
Bu4NHSO4 or = Tetrabutyl ammonium hydrogen sulfate
TBAHS
DABCO = 1,4-Diazabicyclo[2.2.2]octane
DCM = Dichloromethane
DIPEA or DIEA or = Diisopropylethylamine
iPr2NEt
DHT = Dihydrotestosterone
DMAC = N,N-Dimethylacetamide
DMAP = 4-N,N-Dimethylaminopyridine
DMEM/F12 = Dulbecco's modified Eagle's medium/F12
DMF = N,N-Dimethylformamide
DMSO = Dimethylsulfoxide
DTT = Dithiothreitol
EDTA = Ethylene diamine tetraacetic acid
Et2O = Diethyl ether
EtOAc = Ethyl acetate
EtOH = Ethanol
HPLC = High Pressure Liquid Chormatography
KOAc = Potassium Acetate
mCPBA = m-Chloro-peroxybenzoic acid
MeOH = Methanol
NBS = N-bromosuccinimide
NCS = N-chlorosuccinimide
NIS = N-iodosuccinimide
NMP = 1-Methyl2-pyrrolidinone
NMR = Nuclear Magnetic Resonance
PdCl2(PPh3)2 = Bis(triphenylphosphine) Palladium (II) chloride
Pd2(dba)3 = Tris[μ-[(1,2-η:4,5-η)-(1E,4E)-1,5-diphenyl-1,4-
pentadien-3-one]]dipalladium
PdCl2(dppf) = 1,1'-Bis(diphenylphosphino)ferrocenepalladium
chloride
Pd(OAc)2 = Palladium (II) acetate
Ph3P = Triphenyl Phosphine
OTBS = t-Butyl-dimethyl silyloxy
OXONE ® = Potassium monopersulfate triple salt
PBS = Phosphate-buffered saline
TBAF = Tetrabutylammonium fluoride
TE or TED Buffer = Tris HCl + EDTA
(Tetraacetic Acid Ethylene Diamine)
TEA or Et3N = Triethylamine
THF = Tetrahydrofuran
TMS = Trimethylsilyl
Tris HCl = Tris[hydroxymethyl]aminomethyl hydrochloride
The term “subject” as used herein, refers to an animal, preferably a mammal, most preferably a human, who has been the object of treatment, observation or experiment.
The term “therapeutically effective amount” as used herein, means that amount of active-compound or pharmaceutical agent that elicits the biological or medicinal response in a tissue system, animal or human that is being sought by a researcher, veterinarian, medical doctor or other clinician, which includes, but is not limited to, alleviation of the symptoms of the disease or disorder being treated.
As used herein, the term “composition” is intended to encompass a product comprising the specified ingredients in the specified amounts, as well as any product which results, directly or indirectly, from combinations of the specified ingredients in the specified amounts.
Where the compounds according to this invention have at least one chiral center, they may accordingly exist as enantiomers. Where the compounds possess two or more chiral centers, they may additionally exist as diastereomers. It is to be understood that all such isomers and mixtures thereof are encompassed within the scope of the present invention. Furthermore, some of the crystalline forms for the compounds may exist as polymorphs and as such are intended to be included in the present invention. In addition, some of the compounds may form solvates with water (i.e., hydrates) or common organic solvents, and such solvates are also intended to be encompassed within the scope of this invention.
Where the processes for the preparation of the compounds according to the invention give rise to mixture of stereoisomers, these isomers may be separated by conventional techniques such as preparative chromatography. The compounds may be prepared in racemic form, or individual enantiomers may be prepared either by enantiospecific synthesis or by resolution. The compounds may, for example, be resolved into their component enantiomers by standard techniques, such as the formation of diastereomeric pairs by salt formation with an optically active acid, such as (−)-di-p-toluoyl-D-tartaric acid and/or (+)-di-p-toluoyl-L-tartaric acid followed by fractional crystallization and regeneration of the free base. The compounds may also be resolved by formation of diastereomeric esters or amides, followed by chromatographic separation and removal of the chiral auxiliary. Alternatively, the compounds may be resolved using a chiral HPLC column.
During any of the processes for preparation of the compounds of the present invention, it may be necessary and/or desirable to protect sensitive or reactive groups on any of the molecules concerned. This may be achieved by means of conventional protecting groups, such as those described in Protective Groups in Organic Chemistry, ed. J. F. W. McOmie, Plenum Press, 1973; and T. W. Greene & P. G. M. Wuts, Protective Groups in Organic Synthesis, John Wiley & Sons, 1991. The protecting groups may be removed at a convenient subsequent stage using methods known from the art.
The present invention includes within its scope prodrugs of the compounds of this invention. In general, such prodrugs will be functional derivatives of the compounds which are readily convertible in vivo into the required compound. Thus, in the methods of treatment of the present invention, the term “administering” shall encompass the treatment of the various disorders described with the compound specifically disclosed or with a compound which may not be specifically disclosed, but which converts to the specified compound in vivo after administration to the patient. Conventional procedures for the selection and preparation of suitable prodrug derivatives are described, for example, in Design of Prodrugs, ed. H. Bundgaard, Elsevier, 1985.
For use in medicine, the salts of the compounds of this invention refer to “pharmaceutically acceptable salts.” Other salts may, however, be useful in the preparation of compounds according to this invention or of their pharmaceutically acceptable salts. Suitable pharmaceutically acceptable salts of the compounds include acid addition salts which may, for example, be formed by mixing a solution of the compound with a solution of a pharmaceutically acceptable acid such as hydrochloric acid, sulfuric acid, fumaric acid, maleic acid, succinic acid, acetic acid, benzoic acid, citric acid, tartaric acid, carbonic acid or phosphoric acid. Furthermore, where the compounds of the invention carry an acidic moiety, suitable pharmaceutically acceptable salts thereof may include alkali metal salts, e.g., sodium or potassium salts; alkaline earth metal salts, e.g., calcium or magnesium salts; and salts formed with suitable organic ligands, e.g., quaternary ammonium salts. Representative pharmaceutically acceptable salts include the following:
acetate, benzenesulfonate, benzoate, bicarbonate, bisulfate, bitartrate, borate, bromide, calcium edetate, camsylate, carbonate, chloride, clavulanate, citrate, dihydrochloride, edetate, edisylate, estolate, esylate, fumarate, gluceptate, gluconate, glutamate, glycollylarsanilate, hexylresorcinate, hydrabamine, hydrobromide, hydrochloride, hydroxynaphthoate, iodide, isothionate, lactate, lactobionate, laurate, malate, maleate, mandelate, mesylate, methylbromide, methylnitrate, methylsulfate, mucate, napsylate, nitrate, N-methylglucamine ammonium salt, oleate, pamoate (embonate), palmitate, pantothenate, phosphate/diphosphate, polygalacturonate, salicylate, stearate, sulfate, subacetate, succinate, tannate, tartrate, teoclate, tosylate, triethiodide and valerate.
Representative acids and bases which may be used in the preparation of pharmaceutically acceptable salts include the following:
acids including acetic acid, 2,2-dichlorolactic acid, acylated amino acids, adipic acid, alginic acid, ascorbic acid, L-aspartic acid, benzenesulfonic acid, benzoic acid, 4-acetamidobenzoic acid, (+)-camphoric acid, camphorsulfonic acid, (+)-(1S)-camphor-10-sulfonic acid, capric acid, caproic acid, caprylic acid, cinnamic acid, citric acid, cyclamic acid, dodecylsulfuric acid, ethane-1,2-disulfonic acid, ethanesulfonic acid, 2-hydrocy-ethanesulfonic acid, formic acid, fumaric acid, galactaric acid, gentisic acid, glucoheptonic acid, D-gluconic acid, D-glucoronic acid, L-glutamic acid, α-oxo-glutaric acid, glycolic acid, hipuric acid, hydrobromic acid, hydrochloric acid, (+)-L-lactic acid, (±)-DL-lactic acid, lactobionic acid, maleic acid, (−)-L-malic acid, malonic acid, (±)-DL-mandelic acid, methanesulfonic acid, naphthalene-2-sulfonic acid, naphthalene-1,5-disulfonic acid, 1-hydroxy-2-naphthoic acid, nicotinc acid, nitric acid, oleic acid, orotic acid, oxalic acid, palmitric acid, pamoic acid, phosphoric acid, L-pyroglutamic acid, salicylic acid, 4-amino-salicylic acid, sebaic acid, stearic acid, succinic acid, sulfuric acid, tannic acid, (+)-L-tartaric acid, thiocyanic acid, p-toluenesulfonic acid and undecylenic acid; and
bases including ammonia, L-arginine, benethamine, benzathine, calcium hydroxide, choline, deanol, diethanolamine, diethylamine, 2-(diethylamino)-ethanol, ethanolamine, ethylenediamine, N-methyl-glucamine, hydrabamine, 1H-imidazole, L-lysine, magnesium hydroxide, 4-(2-hydroxyethyl)-morpholine, piperazine, potassium hydroxide, 1-(2-hydroxyethyl)-pyrrolidine, secondary amine, sodium hydroxide, triethanolamine, tromethamine and zinc hydroxide.
The present invention further comprises pharmaceutical compositions containing one or more compounds of formula (I), compounds of formula (II) and/or compounds of formula (III) with a pharmaceutically acceptable carrier. Pharmaceutical compositions containing one or more of the compounds of the invention described herein as the active ingredient can be prepared by intimately mixing the compound or compounds with a pharmaceutical carrier according to conventional pharmaceutical compounding techniques. The carrier may take a wide variety of forms depending upon the desired route of administration (e.g., oral, parenteral). Thus for liquid oral preparations such as suspensions, elixirs and solutions, suitable carriers and additives include water, glycols, oils, alcohols, flavoring agents, preservatives, stabilizers, coloring agents and the like; for solid oral preparations, such as powders, capsules and tablets, suitable carriers and additives include starches, sugars, diluents, granulating agents, lubricants, binders, disintegrating agents and the like. Solid oral preparations may also be coated with substances such as sugars or be enteric-coated so as to modulate major site of absorption. For parenteral administration, the carrier will usually consist of sterile water and other ingredients may be added to increase solubility or preservation. Injectable suspensions or solutions may also be prepared utilizing aqueous carriers along with appropriate additives.
To prepare the pharmaceutical compositions of this invention, one or more compounds of the present invention as the active ingredient is intimately admixed with a pharmaceutical carrier according to conventional pharmaceutical compounding techniques, which carrier may take a wide variety of forms depending of the form of preparation desired for administration, e.g., oral or parenteral such as intramuscular. In preparing the compositions in oral dosage form, any of the usual pharmaceutical media may be employed. Thus, for liquid oral preparations, such as for example, suspensions, elixirs and solutions, suitable carriers and additives include water, glycols, oils, alcohols, flavoring agents, preservatives, coloring agents and the like; for solid oral preparations such as, for example, powders, capsules, caplets, gelcaps and tablets, suitable carriers and additives include starches, sugars, diluents, granulating agents, lubricants, binders, disintegrating agents and the like. Because of their ease in administration, tablets and capsules represent the most advantageous oral dosage unit form, in which case solid pharmaceutical carriers are obviously employed. If desired, tablets may be sugar coated or enteric coated by standard techniques. For parenterals, the carrier will usually comprise sterile water, through other ingredients, for example, for purposes such as aiding solubility or for preservation, may be included. Injectable suspensions may also be prepared, in which case appropriate liquid carriers, suspending agents and the like may be employed. The pharmaceutical compositions herein will contain, per dosage unit, e.g., tablet, capsule, powder, injection, teaspoonful and the like, an amount of the active ingredient necessary to deliver an effective dose as described above. The pharmaceutical compositions herein will contain, per unit dosage unit, e.g., tablet, capsule, powder, injection, suppository, teaspoonful and the like, of from about 0.01-500 mg and may be given at a dosage of from about 0.05-500 mg/kg/day, preferably from about 0.05-10 mg/kg/day, more preferably from about 1.0-3.0 mg/kg/day. The dosages, however, may be varied depending upon the requirement of the patients, the severity of the condition being treated and the compound being employed. The use of either daily administration or post-periodic dosing may be employed.
Preferably these compositions are in unit dosage forms from such as tablets, pills, capsules, powders, granules, sterile parenteral solutions or suspensions, metered aerosol or liquid sprays, drops, ampoules, autoinjector devices or suppositories; for oral parenteral, intranasal, sublingual or rectal administration, or for administration by inhalation or insufflation. Alternatively, the composition may be presented in a form suitable for once-weekly or once-monthly administration; for example, an insoluble salt of the active compound, such as the decanoate salt, may be adapted to provide a depot preparation for intramuscular injection. For preparing solid compositions such as tablets, the principal active ingredient is mixed with a pharmaceutical carrier, e.g. conventional tableting ingredients such as corn starch, lactose, sucrose, sorbitol, talc, stearic acid, magnesium stearate, dicalcium phosphate or gums, and other pharmaceutical diluents, e.g. water, to form a solid preformulation composition containing a homogeneous mixture of a compound of the present invention, or a pharmaceutically acceptable salt thereof. When referring to these preformulation compositions as homogeneous, it is meant that the active ingredient is dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective dosage forms such as tablets, pills and capsules. This solid preformulation composition is then subdivided into unit dosage forms of the type described above containing from 0.1 to about 500 mg of the active ingredient of the present invention. The tablets or pills of the novel composition can be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action. For example, the tablet or pill can comprise an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former. The two components can be separated by an enteric layer which serves to resist disintegration in the stomach and permits the inner component to pass intact into the duodenum or to be delayed in release. A variety of material can be used for such enteric layers or coatings, such materials including a number of polymeric acids with such materials as shellac, cetyl alcohol and cellulose acetate.
The liquid forms in which the novel compositions of the present invention may be incorporated for administration orally or by injection include, aqueous solutions, suitably flavoured syrups, aqueous or oil suspensions, and flavoured emulsions with edible oils such as cottonseed oil, sesame oil, coconut oil or peanut oil, as well as elixirs and similar pharmaceutical vehicles. Suitable dispersing or suspending agents for aqueous suspensions, include synthetic and natural gums such as tragacanth, acacia, alginate, dextran, sodium carboxymethylcellulose, methylcellulose, polyvinyl-pyrrolidone or gelatin.
The method of treating disorders or conditions modulated by the androgen receptor described in the present invention may also be carried out using a pharmaceutical composition comprising any of the compounds as defined herein and a pharmaceutically acceptable carrier. The pharmaceutical composition may contain between about 0.01 mg and 500 mg, preferably about 10 to 100 mg, of the compound, and may be constituted into any form suitable for the mode of administration selected. Carriers include necessary and inert pharmaceutical excipients, including, but not limited to, binders, suspending agents, lubricants, flavorants, sweeteners, preservatives, dyes, and coatings. Compositions suitable for oral administration include solid forms, such as pills, tablets, caplets, capsules (each including immediate release, timed release and sustained release formulations), granules, and powders, and liquid forms, such as solutions, syrups, elixers, emulsions, and suspensions. Forms useful for parenteral administration include sterile solutions, emulsions and suspensions.
Advantageously, compounds of the present invention may be administered in a single daily dose, or the total daily dosage may be administered in divided doses of two, three or four times daily. Furthermore, compounds for the present invention can be administered in intranasal form via topical use of suitable intranasal vehicles, or via transdermal skin patches well known to those of ordinary skill in that art. To be administered in the form of a transdermal delivery system, the dosage administration will, of course, be continuous rather than intermittent throughout the dosage regimen.
For instance, for oral administration in the form of a tablet or capsule, the active drug component can be combined with an oral, non-toxic pharmaceutically acceptable inert carrier such as ethanol, glycerol, water and the like. Moreover, when desired or necessary, suitable binders; lubricants, disintegrating agents and coloring agents can also be incorporated into the mixture. Suitable binders include, without limitation, starch, gelatin, natural sugars such as glucose or beta-lactose, corn sweeteners, natural and synthetic gums such as acacia, tragacanth or sodium oleate, sodium stearate, magnesium stearate, sodium benzoate, sodium acetate, sodium chloride and the like. Disintegrators include, without limitation, starch, methyl cellulose, agar, bentonite, xanthan gum and the like.
The liquid forms in suitably flavored suspending or dispersing agents such as the synthetic and natural gums, for example, tragacanth, acacia, methyl-cellulose and the like. For parenteral administration, sterile suspensions and solutions are desired. Isotonic preparations which generally contain suitable preservatives are employed when intravenous administration is desired.
The compound of the present invention can also be administered in the form of liposome delivery systems, such as small unilamellar vesicles, large unilamellar vesicles, and multilamellar vesicles. Liposomes can be formed from a variety of phospholipids, such as cholesterol, stearylamine or phophatidylcholines.
Compounds of the present invention may also be delivered by the use of monoclonal antibodies as individual carriers to which the compound molecules are coupled. The compounds of the present invention may also be coupled with soluble polymers as targetable drug carriers. Such polymers can include polyvinylpyrrolidone, pyran copolymer, polyhydroxypropylmethacrylamidephenol, polyhydroxy-ethylaspartamidephenol, or polyethyl eneoxidepolylysine substituted with palmitoyl residue. Furthermore, the compounds of the present invention may be coupled to a class of biodegradable polymers useful in achieving controlled release of a drug, for example, polylactic acid, polyepsilon caprolactone, polyhydroxy butyeric acid, polyorthoesters, polyacetals, polydihydropyrans, polycyanoacrylates and cross-linked or amphipathic block copolymers of hydrogels.
Compounds of this invention may be administered in any of the foregoing compositions and according to dosage regimens established in the art whenever treatment of disorders or conditions modulated by the androgen receptor is required.
The daily dosage of the products may be varied over a wide range from 0.01 to 500 mg per adult human per day. For oral administration, the compositions are preferably provided in the form of tablets containing, 0.01, 0.05, 0.1, 0.5, 1.0, 2.5, 5.0, 10.0, 15.0, 25.0, 50.0, 100, 150, 200, 250 and 500 milligrams of the active ingredient for the symptomatic adjustment of the dosage to the patient to be treated. An effective amount of the drug is ordinarily supplied at a dosage level of from about 0.01 mg/kg to about 500 mg/kg of body weight per day. Preferably, the range is from about 0.5 to about 10.0 mg/kg of body weight per day, most preferably, from about 1.0 to about 3.0 mg/kg of body weight per day. The compounds may be administered on a regimen of 1 to 4 times per day.
Optimal dosages to be administered may be readily determined by those skilled in the art, and will vary with the particular compound used, the mode of administration, the strength of the preparation, the mode of administration, and the advancement of the disease condition. In addition, factors associated with the particular patient being treated, including patient age, weight, diet and time of administration, will result in the need to adjust dosages.
Compounds of formula (I), (II) and (III) may be prepared according to the processes outlined in the Schemes below.
Compounds of formula (I) wherein b is 0, c is 0 and X is NR1, may be prepared according to the process outlined in Scheme 1 below.
Figure US07282507-20071016-C00045
Accordingly, a suitably substituted compound of formula (V), a known compound or compound prepared by known methods, is reacted with a source of iodine or bromine, such as NIS, ICI, NBS, Br2, I2 and the like, in an organic solvent or mixture thereof, such as THF, methanol, acetic acid, THF/methanol, and the like, optionally in the presence of a catalyst, such as acetic acid (with ICI), toluene sulfonic acid (with NIS or NBS), and the like, to yield the corresponding compound of formula (VI), wherein Q is I or Br, respectively.
The compound of formula (VI) is reacted with mesyl chloride (or alternatively, with p-toluenesulfonyl chloride), in the presence of an organic base such as pyridine, potassium t-butoxide, and the like, in an organic solvent such as THF, pyridine, DMF, and the like, to yield the corresponding compound of formula (VII).
The compound of formula (VII) is reacted with a suitably substituted compound of formula (VII), a known compound or compound prepared by known methods, in the presence of a catalyst such as PdCl2(PPh3)2, Pd2(dba)3, PdCl2(dppf), and the like, in the presence of CuI, in the presence of an organic base, preferably, in the presence of a tertiary amine base such as TEA, DIPEA, pyridine, and the like, in an organic solvent such as THF, DMF, DMAC, and the like, to yield the corresponding compound of formula (Ia).
The compound of formula (Ia) is optionally de-protected according to known methods, for example, by reacting with a base such as NaOH, KOH, NaO(lower alkyl), and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF, and the like, to yield the corresponding compound of formula (Ib). Alternatively, the compound of formula (Ia) is reacted with TBAF in an organic solvent such as THF, DMF, and the like, preferably at an elevated temperature of greater than or equal to about 50° C., to yield the corresponding compound of formula (Ib).
Compounds of formula (II) wherein b is 0, c is 0 and X is NR1 and compounds of formula (III) wherein b is 0 and c is 0, may be similarly prepared according to the process outlined in Scheme 1 above.
More particularly, compounds of formula (II) wherein b is 0, c is 0 and X is NR1 may be prepared by substituting a suitably substituted compound of formula (IX)
Figure US07282507-20071016-C00046
a known compound or compound prepared by known methods, for the compound of formula (VII), to yield the corresponding compound of formula (IIa)
Figure US07282507-20071016-C00047
The compound of formula (IIa) may be further optionally de-protected according to known methods to yield the corresponding compound of formula (IIb) wherein R1 is hydrogen.
Similarly, compounds of formula (III) may be prepared according to the process outlined in Scheme 1 by substituting a suitably substituted compound of formula (X)
Figure US07282507-20071016-C00048
a known compound or compound prepared by known methods, for the compound of formula (V), to yield the corresponding compound of formula (IIIa)
Figure US07282507-20071016-C00049
The compound of formula (IIIa) may be further optionally de-protected according to known methods to yield the corresponding compound of formula (IIIb) wherein R1 is hydrogen.
Compounds of formula (I), compounds of formula (II) and compounds of formula (III) wherein b is 1 and/or c is 1 can be prepared according to the process outlined in Scheme 1 by substituting a suitably substituted compound of formula (XI), (XII) or (XIII)
Figure US07282507-20071016-C00050
a known compound or compound prepared by known methods, for the compound of formula (VIII).
Compounds of formula (I) wherein R4 is lower alkyl, more preferably methyl, may be prepared according to the process outlined in Scheme 2.
Figure US07282507-20071016-C00051
Accordingly, a suitably substituted compound of formula (VI) is reacted with a suitably substituted compound of formula (XIV), a known compound or compound prepared by known methods, in the presence of a catalyst such as palladium acetate, in the presence of a base such as potassium acetate, DABCO, and the like, at an elevated temperature, preferably, at an elevated temperature of greater than or equal to about 70° C., more preferably, at an elevated temeperature of about 80° C., to yield the corresponding compound of formula (Ic).
Compounds of formula (II) and compounds of formula (III) wherein R4 is lower alkyl, preferably methyl, may be similarly prepared according to the process outlined in Scheme 2. More specifically, compounds of formula (II) may be prepared by substituting a suitably substituted compound of formula (XV)
Figure US07282507-20071016-C00052
for the compound of formula (XIV). Similarly, compounds of formula (III) may be prepared by substituting a suitably substituted compound of formula (XVI)
Figure US07282507-20071016-C00053
for the compound of formula (VI).
Compounds of formula (I) wherein R4 is other than hydrogen or methyl, may be prepared according to the processes outlined in Schemes 3 and 4 below.
Compounds of formula (I) wherein R4 is cyano may be prepared according to the process outlined in Sheme 3 below.
Figure US07282507-20071016-C00054
Accordingly, a suitably substituted compound of formula (Ib) is reacted with a source of iodine, bromine or chlorine such as NIS, NBS, NCS, and the like, in the presence of a base such as potassium t-butoxide, NaH, and the like, in an organic solvent such as THF, DMAC, NMP, and the like, to yield the corresponding compound of formula (Id), wherein J is I, Br or Cl, respectively.
The compound of formula (Id) wherein J is Br or I is reacted with CuCN, in an organic solvent such as DMF, DMAC, NMP, and the like, to yield the corresponding compound of formula (Ie).
Compounds of formula (I) wherein R4 is lower alkyl other than methyl, lower alkenyl or lower alkynyl may be prepared according to the process outlined in Scheme 4.
Figure US07282507-20071016-C00055
The compound of formula (Id) wherein J is Br or I, is reacted with a suitably substituted compound of formula (XVII), a known compound or compound prepared by known methods, in the presence of a catalyst such as PdCl2(PPh3)4, Pd2(dba)3, PdCl2(dppf), and the like, in the presence of CuI, in the presence of an organic base, preferably a tertiary amine base such as TEA, DIPEA, pyridine, and the like, to yield the corresponding compound of formula (XVIII).
The compound of formula (XVIII) is reacted with a reagent such as TBAF, K2CO3, NaO(lower alkyl), and the like, in an organic solvent such as THF, MeOH, EtOH, and the like, to yield the corresponding compound of formula (If).
One skilled in the art will recognize that the compound of formula (If) may be further optionally reduced with a suitable reducing agent such as H2 gas in the presence of a catalyst such as Pd on carbon, Pt on carbon, Lindlar's catalyst, and the like, in an organic solvent such as ethyl acetate, methanol, ethanol, and the like, to yield the corresponding compound of formula (I) wherein the alkynyl group is converted to the corresponding alkenyl (i.e. by selecting the reducing conditions to partially reduce the triple bond) or alkyl (i.e. by selecting the reducing conditions to fully reduce the triple bond).
Alternatively, the compound of formula (Id) is reacted with a suitably substituted compound of formula (XIX), a known compound or compound prepared by known methods, in the presence of a catalyst such as Pd(PPh3)4, and the like, in the presence of an inorganic salt such as lithium chloride, and the like, to yield the corresponding compound of formula (Ig) (For example, see Tetrahedron, 58(51) 2002 pp. 10181-10188). The compound of formula (Ig) may then be further, optionally reduced, as described above, to yield the corresponding compound wherein the lower alkenyl is converted to the corresponding lower alkyl (other than methyl).
One skilled in the art will further recognize that compounds of formula (II) and compounds of formula (III) wherein R4 is other than hydrogen may be similarly prepared according to the processes outlined in Scheme 3 and 4 above, by substituting a suitably substituted compound of formula (IIb) or a suitably substituted compound of formula (IIIb)
Figure US07282507-20071016-C00056
for the compound of formula (Ib) in Scheme 3; or by substituting a suitably substituted compound of formula (IId) or a suitably substituted compound of formula (IIId)
Figure US07282507-20071016-C00057
for the compound of formula (Id) in Scheme 4.
Compounds of formula (I), particularly compounds of formula (I) wherein R2 is —(CH2)1-4—S(O)0-2—R6 may be prepared according to the process outlined in Scheme 5.
Figure US07282507-20071016-C00058
Accordingly, a suitably substituted compound of formula (VII), wherein Q is I or Br, is reacted with a suitably substituted compound of formula (XVIII), wherein G is a selected from the group consisting of H, Cl, OTBS and S—R6, a known compound or compound prepared by known methods, in the presence of a catalyst such as PdCl2(PPh3)2, PdCl2(dppf), Pd2(dba), and the like, in the presence of CuI, in the presence of an organic base, preferably, a tertiary amine base such as TEA, DIPEA, pyridine, and the like, in an organc solvent such as THF, DMF, DMAC, and the like, to yield the corresponding compound of formula (Ih).
The compound of formula (Ih) is optionally de-protected according to known methods to yield the corresponding compound of formula (Ij). For example, when G is H or S—R6, the compound of formula (Ih) may be reacted with with a base such as NaOH, KOH, and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF/water, and the like, to yield the corresponding compound of formula (Ij) wherein G is H or —S—R6, respectively. Alternatively, when G is OTBS, the compound of formula (Ih) may be reacted with a base such as NaOH, KOH, and the like, in an organic solvent or mixture thereof such as methanol/water, ethanol/water, THF/water, and the like, to yield the corresponding compound of formula (Ij) wherein the OTBS group (G) is converted to an —OH group.
Wherein the compound of formula (Ij) G is S—R6, the compound of formula (Ij) is further optionally reacted with an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound of formula (Ik).
Alternatively, wherein the compound of formula (Ij) G is S—R6, the compound of formula (Ij) is further optionally reacted with a compound of formula (XIX), a known compound or compound prepared by known methods, wherein E is Cl, Br or I, preferably, in the presence of a base such as NaH, potassium t-butoxide, and the like, in an organic solvent such as THF, DMF, NMP, and the like, to yield the corresponding compound of formula (Im).
One skilled in the art will recognize that the compound of formula (Im) may be further optionally reacted with an oxidizing reagent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound wherein the —S— of the —(CH2)1-4—S—R6 substituent group is oxidized to the corresponding —SO— or —SO2— group.
One skilled in the art will further recognize that compounds of formula (III) wherein R2 is —(CH2)1-4—S(O)0-2—R6 may similarly be prepared according to the process outlined in Scheme 5 by substitution of a suitably substituted compound of formula (XX)
Figure US07282507-20071016-C00059
for the compound of formula (VII).
One skilled in the art will further recognize that compounds of formula (I) and compounds of formula (III) wherein R2 is selected from —(CH2)1-4—O—R6, —(CH2)1-4—NH—R6 or —(CH2)1-4—N(lower alkyl)-R6 may be similarly prepared according to the process outlined in Scheme 5 above, by selecting and substituting a suitably substituted compound of formula (XVIII) wherein G is replaced with an —O—R6, —NH—R6 or —N(lower alkyl)-R6 group, respectively.
Compound of formula (I) wherein R2 is selected from the group consisting of —(CH2)1-4—S(O)0-2—R6 and wherein R6 is an optionally substituted aryl or an optionally substituted heteroaryl may alternatively be prepared from the corresponding compound of formula (Ih) wherein G is Cl, according to the process outlined in Scheme 6.
Figure US07282507-20071016-C00060
Accordingly, a suitably substituted compound of formula (Ih) wherein G is Cl, is reacted with a suitably substituted compound of formula (XXI), a known compound or compound prepared by known methods, in the presence of a base such as NaOCH3, NaO(lower alkyl), TEA, and the like, in an organic solvent such as methanol, ethanol, THF, and the like, to yield the corresponding compound of formula (Ik).
The compound of formula (Ik) is reacted with a suitably selected oxidizing agent such as OXONE®/TBAHS, mCPBA, and the like, in an organic solvent or mixture thereof such as ethyl acetate/water, methanol/water, DCM, ethyl acetate, and the like, to yield the corresponding compound of formula (Im).
One skilled in the art will further recognize that compounds of formula (III) wherein R2 is —(CH2)1-4—S(O)0-2—R6 may similarly be prepared according to the process outlined in Scheme 6 by substitution of a suitably substituted compound of formula (IIIh)
Figure US07282507-20071016-C00061
wherein G is Cl, for the compound of formula (IIIh).
Compounds of formula (I) wherein R2 is selected from —(CH2)1-4—O—C(O)—R6 may be prepared according to the process outlined in Scheme 7.
Figure US07282507-20071016-C00062
Accordingly, a suitably substituted compound of formula (XXII) (prepared as previously described in Scheme 5, de-protecting a compound of formula (Ih) wherein G is OTBS) is reacted with a suitably substituted acid chloride, a compound of formula (XXIII), a known compound or compound prepared by known methods, in the presence of an organic base, preferably, a tertiary amine base such a TEA, DIPEA, pyridine, and the like, in an organic solvent such as THF, DCM, acetonitrile, and the like, to yield the corresponding compound of formula (In).
One skilled in the art will further recognize that compounds of formula (III) wherein R2 is —(CH2)1-4—O—C(O)—R6 may similarly be prepared according to the process outlined in Scheme 7 by substitution of a suitably substituted compound of formula (IIIh)
Figure US07282507-20071016-C00063
wherein G is OTBS, for the compound of formula (Ih).
Compounds of formula (I) wherein R1 is other than hydrogen or wherein R7 is other than hydrogen may be prepared according to the process outlined in Sceme 8.
Figure US07282507-20071016-C00064
Accordingly, a suitably substituted compound of formula (Ib), is reacted with a suitably substituted compound of formula (XXIV), wherein V is Br, Cl or I, a known compound or compound prepared by known methods, in the presence of a base such as potassium t-butoxide, sodium hydride, and the like, in an organic solvent such as THF, DMF, DMAC, and the like, to yield a mixture of the corresponding compounds of formula (Ip) and (Iq).
One skilled in the art will further recognize that compounds of formula (II) and compounds of formula (III) wherein R1 is other than hydrogen or R7 is other than hydrogen, may be similarly prepared according to the process outlined in Scheme 8, with substitution of suitably substituted compounds of formula (IIb) or (IIIb)
Figure US07282507-20071016-C00065
for the compound of formula (Ib).
One skilled in the art will further recognize that compounds of formula (I), compounds of formula (II) and/or compounds of formula (III) wherein b is other than 0 and/or wherein c is other than 0 may similarly be prepared according to any of the processes outlined in Schemes 2-8 by selecting and substituting suitably substituted reagents for those disclosed herein.
Compounds of formula (I) and compounds of formula (II) wherein X is O may be similarly prepared according to the processes described herein, with appropriate selection and substitution of suitable starting material.
For example, compounds of formula (I) may be prepared according to the process outlined in Scheme 1 by substituting a suitably substituted compound of formula (XXV)
Figure US07282507-20071016-C00066
for the compound of formula (V).
Compounds of formula (I) and compounds of formula (II) wherein X is S may be prepared according to the process outlined in Scheme 9.
Figure US07282507-20071016-C00067
Accordingly, a suitably substituted compound of formula (XXVI), a known compound or compound prepared by known methods, is reacted with iodine or a source or iodine, according to known methods (for example, J. Het. Chem., 15(2), 1978, pp 337-342), to yield the corresponding compound of formula (XXVII).
The compound of formula (XXVI) or the compound of formula (XXVII) is reacted according to known methods, to yield the corresponding compound of formula (XXVIII), wherein M is Li, Mg, Zn, Cu, and the like, and wherein the compound of formula (XXVIII) is preferably not isolated. The compound of formula (XXVIII) is reacted with a suitably substituted compound of formula (XXIX), a known compound or compound prepared by known methods, according to known methods (for example, J. Med. Chem., 46(4), 2003, pp 532-541) to yield the corresponding compound of formula (Ir).
One skilled in the art will recognize that compounds of formula (I) wherein X is S and wherein R4, b and/or c are other then hydrogen and 0, respectively, may be similarly prepared according to the process outlined in Scheme 9 above by selecting and substituting suitably substituted reagents for the compounds of formula (XXVI).
One skilled in the art will further recognize that compounds of formula (II) wherein X is S may be similarly prepared according to the process outlined in scheme 9 above by selecting and substituting a suitably substituted cyclic ketone, for example a compound of formula (XXX)
Figure US07282507-20071016-C00068
for the compound of formula (XXIX).
Compounds of formula (IX) are known compounds or compounds which may be prepared by known methods. For example, compounds of formula (IX) may be prepared according to the process outlined in Scheme 10.
Figure US07282507-20071016-C00069
Accordingly, a suitably substituted compound of formula (XXX), a known compound or compound prepared by known methods, is reacted with a compound of formula (XXXI), wherein W is Br, Cl or I, a known compound or compound prepared by known methods, in an anhydrous organic solvent such as THF, diethyl ether, and the like, to yield the corresponding compound of formula (IX).
Compounds of formula (XVIII) are known compounds or compounds which may be prepared by known methods. For example, compounds of formula (XVIII) may be prepared according to the process outlined in Scheme 11.
Figure US07282507-20071016-C00070
Accordingly, a suitably substituted compound of formula (XXXII), a known compound or compound prepared by known methods, wherein G is selected from the group consisting of H, Cl, OTBS and S—R6, is reacted with a compound of formula (XXXI) wherein W is Br, Cl or I, a known compound, in an anhydrous organic solvent such as THF, diethyl ether, and the like, to yield the corresponding compound of formula (XVIII).
Compounds of formula (XI) and compounds of formula (XII) wherein R2 is —CH2—S—R6 may alternatively be prepared according to the process outlined in Scheme 12.
Figure US07282507-20071016-C00071
Accordingly, a suitably substituted compound of formula (XXXIII), a known compound or compound prepared by known methods, is reacted with (CH3)3SI, in the presence of a base such as sodium hydride, potassium hydride, and the like, in an organic solvent such as DMF, DMSO, and the like, to yield the corresponding compound of formula (XXXIV).
The compound of formula (XXXIV) is reacted with Li-CC-TMS, a known compound or compound prepared by known methods (for example by reacting HCC-TMS with butyl lithium), to yield a mixture of the compound of formula (XXXV) and (XXXVI).
The compound of formula (XXXV) and/or the compound of formula (XXXVI) (isolated or in a mixture) is reacted with a reagent such as TBAF, K2CO3, NaO(lower alkyl), and the like, in an organic solvent such as THF, methanol, ethanol, and the like, to yield the corresponding compound of formula (XIIa) and/or the corresponding compound of formula (XIa) (isolated or in a mixture), respectively.
Compounds of formula (XIV) wherein R2 is —(CH2)1-4—S—R6 may be prepared according to the process outlined in Scheme 13.
Figure US07282507-20071016-C00072
The compound of formula (XXXVII), a known compound or compound prepared by known methods, is reacted with a suitably substituted compound of formula (XXXVIII), a known compound or compound prepared by known methods, in an anhydrous organic solvent such as THF, diethyl ether, and the like, to yield the corresponding compound of formula (XIVa).
The following General Procedures are set forth to aid in the understanding of the invention, providing examples for completing selected steps in the synthesis of the compound of the present invention. These synthesis procedures are not intended and should not be construed to limit in any way the invention set forth in the claims which follow thereafter. In the general schemes described below,
Figure US07282507-20071016-C00073
represents phenyl or a six membered heteroaryl ring structure containing one to two N atoms.
EXAMPLE A Oxidation
Figure US07282507-20071016-C00074
A suitably substituted sulfide is dissolved in a 1:1 mixture of dichloromethane and water and stirred rapidly. A catalytic amount of tetrabutylammonium hydrogensulfate is employed as a phase-transfer catalyst (PTC), added to the solution in an amount between about 1% and about 20%. Next 3 equivalents of OXONE® are added and the solution is stirred overnight at room temperature. The layers are separated and the aqueous layer is extracted with dichloromethane. The combined organic layers are washed with water and/or 10% sodium thiosulfate solution, then brine, dried over magnesium sulfate, filtered, and evaporated to yield a residue which is purified by column chromatography.
EXAMPLE B De-Protection
Figure US07282507-20071016-C00075
A suitably substituted protected indole derivative or intermediate is dissolved in methanol and about 1 to about 4 equivalents of sodium hydroxide solution (1 to 4 M) or lithium hydroxide dissolved in a minimal amount of water. The reaction mixture is stirred at temperature in the range of between about 0° C. to about 50° C., the reaction is allowed to proceed for about 0.5 hour to about overnight, and then the reaction mixture is concentrated under vacuum. Water is added to the residue and the solution is acidified with 1N hydrochloric acid solution. The aqueous solution is extracted twice with diethyl ether and the diethyl ether extracts are dried over magnesium sulfate, filtered, and concentrated under vacuum to yield a residue. The residue is purified by column chromatography.
EXAMPLE C Sonogashira
Figure US07282507-20071016-C00076
A suitably R0 substituted protected aniline (wherein R0 is a lower alkyl such as methyl, phenyl or tolyl) is added to a round-bottom flask along with about 5 to about 10 mole % of bis(triphenylphosphine)palladium(II) chloride and about 10 to about 25 mole % of copper iodide. The flask is fitted with a septum attached to an argon, nitrogen or alternative inert gas inlet. The solvent —tetrahydrofuran or dimethylformamide—is added via syringe followed by about 1.5 to about 2 equivalents of triethylamine or diethylamine. The solution is stirred for about 1 to about 30 minutes and a suitably substituted alkyne is added either neat or in a small amount of the solvent used in the reaction. The reaction is allowed to proceed for about 3 to about 24 hours. The solution is evaporated and the residue is purified by column chromatography.
EXAMPLE D Alkyne
Figure US07282507-20071016-C00077
A 0.5 M solution of ethynylmagnesium bromide is cooled down in an ice bath under an argon atmosphere. A suitably substituted ketone is added in portions slowly via syringe and the reaction is allowed to proceed overnight. A solution of saturated ammonium chloride is added to the reaction and extracted twice with ethyl ether. The ethyl ether extracts are dried over magnesium sulfate, filtered, and evaporated to yield an oil. The oil is purified using a Kugelrohr or by column chromatography.
EXAMPLE E Iodo Protected Aniline: Pyridine Method, Step 1
Figure US07282507-20071016-C00078
A suitably substituted aniline or derivative is dissolved in pyridine. About 5 equivalents of methanesulfonyl chloride is added and the solution is stirred overnight at room temperature. The solution is evaporated under vacuum and ethyl acetate is added to the residue and then decanted. This is done multiple times. The washes are combined and then washed with water, 1N hydrochloric acid solution, water and brine, then dried over magnesium sulfate, filtered and evaporated to yield a solid.
EXAMPLE F Iodo Protected Aniline: Pyridine Method, Step 2
Figure US07282507-20071016-C00079
A solution of a suitably substituted bismethanesulfonate derivative in methanol is heated to about 50° C. in a water bath. Lithium hydroxide or sodium hydroxide (about 1.5 equivalents) in a minimal amount of water is added. The solution is stirred for about two hours at about 50° C. then allowed to proceed overnight at about room temperature. The solvent is removed under vacuum and water is added. The solution is acidified with 1N hydrochloric acid solution and a solid precipitates out. The solid is filtered off and washed with water and pentane. The solid is then taken up in ethyl acetate or diethyl ether and the organic solution is washed with water, dried over magnesium sulfate, filtered, evaporated to yield a solid.
EXAMPLE G Iodo Protected Aniline: Potassium t-butoxide Route
Figure US07282507-20071016-C00080
A suitably substituted iodoaniline or derivative is dissolved in THF and cooled in an ice bath under argon. Potassium t-butoxide (1.0M in THF) (about 3.2 equivalents) is added dropwise via syringe in portions over about one-half hour. The solution is stirred for about one-half hour and about 1.6 equivalents of methanesulfonyl chloride are added all at once. The reaction is allowed to go overnight. Water and 1N hydrochloric acid are added to the solution and then extracted twice with diethyl ether. The diethyl ether extracts are washed with water and brine, then dried over magnesium sulfate, filtered, and evaporated to yield a residue which is purified by column chromatography as necessary.
EXAMPLE H Iodination
Figure US07282507-20071016-C00081
A suitably substituted aniline or derivative is dissolved in a 1:1 mixture of THF and methanol. About 1.1 equivalents of N-iodosuccinimide are then added, followed by addition of about 5 mol % of p-toluenesulfonic acid monohydrate. The solution is stirred overnight, then concentrated and diethyl ether is added. The solution is washed with water twice to remove succinimide, then washed with brine, dried over magnesium sulfate, filtered, evaporated to yield a solid which is triturated with pentane or hexanes to remove iodine. The solid is then again filtered and washed with pentane or hexanes and dried.
EXAMPLE I Sulfide Displacement
Figure US07282507-20071016-C00082
A suitably substituted alkyl chloride is dissolved in methanol. The anion of the substituted arylthio is prepared by dissolving the thiol in about an equimolar amount of 0.5M sodium methoxide in methanol. The thiolate solution (about 2 equivalents) is added to the alkyl chloride in methanol and stirred overnight. The solution is concentrated and 1N HCl is added, followed by extraction twice with ethyl ether. The ether extracts are dried over magnesium sulfate, filtered, and evaporated to yield a residue. The residue is purified by column chromatography.
The following Examples are set forth to aid in the understanding of the invention, and are not intended and should not be construed to limit in any way the invention set forth in the claims which follow thereafter.
In the Examples which follow, some synthesis products may be listed as having been isolated as a residue. It will be understood by one of ordinary skill in the art that the term “residue” does not limit the physical state in which the product was isolated and may include, for example, a solid, an oil, a foam, a gum, a syrup, and the like.
EXAMPLE 1 1-(3,4-Dichloro-phenylsulfanyl)-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl) -propan-2-ol
Figure US07282507-20071016-C00083
To a solution of 1-chloro-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (1.0 g, 2.5 mmol) in methanol (10 mL) and tetrahydrofuran (10 mL) was added 3,4-dichlorobenzenethiol (0.64 mL, 5.0 mmol) followed by 0.5M sodium methoxide in methanol (10 mL, 5.0 mmol). The reaction mixture was stirred at room temperature overnight. The next day the solvent was evaporated and water was added and the solution was acidified with 1N HCl solution. The solution was extracted three times with ethyl acetate. The combined extracts were washed with brine, dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil. The crude material (oil) was purified by column chromatography three times. The solvent systems used in the purification were of the following order: 5% diethyl ether in dichloromethane, 1% diethyl ether in dichloromethane, and 60% diethyl ether in pentane. The first product that came off was the tertiary sulfide of the title compound as a byproduct. The second product collected from the column was the title compound, a yellow solid.
MH−1=464, MH+23=488
EXAMPLE 2 1-Chloro-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl) -propan-2-ol
Figure US07282507-20071016-C00084
To a 500 mL round-bottom flask were added N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (4.3 g, 10.48 mmol), bis(triphenylphosphine)palladium (II) chloride (0.74 g, 1.048 mmol) and copper (I) iodide (0.40 g, 2.096 mmol). The solids were dissolved in tetrahydrofuran (100 ml) and triethylamine (2.2 mL, 15.72 mmol). The reaction mixture was then evacuated using an adapter fitted to the flask connected to a manifold with vacuum and nitrogen lines. Argon was bubbled into the solution. The flask was then filled with nitrogen and the process was repeated five times. To the reaction mixture was then added 1-chloro-2-methyl-but-3-yn-2-ol in a small amount of tetrahydrofuran (1.61 g, 11.53 mmol). The reaction was stirred overnight under nitrogen. The reaction mixture was concentrated and diethyl ether was added. Some material was observed to have crashed out. The mixture was filtered through Celite and the Celite was washed with diethyl ether. The filtrate was evaporated and the residue pre-absorbed onto silica gel. The residue was purified by column chromatography eluting with 0.70% dichloromethane in pentane to yield the title compound as a yellow solid.
MH−1=321, (loss of methanesulfonyl protecting group on indole ring)
EXAMPLE 3 1-Chloro-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00085
A solution of ethynyl magnesium bromide (0.5M in tetrahydrofuran, 200 mL, 100 mmol) was cooled in an ice bath under argon. Chloroacetone (8 mL, 100 mmol) was added in portions using a syringe. The solution was allowed to stir overnight at room temperature under argon. The reaction was worked-up by adding saturated ammonium chloride solution (100 mL). The solution was extracted twice with diethyl ether and the extracts washed with brine, dried over magnesium sulfate, filtered and evaporated to a brown oil. The oil was purified on a Kugelrohr as the temperature of the oven was ramped slowly to 70° C. under vacuum. Two bulbs were used to collect the distillate, which was collected to yield the title compound as an oil.
EXAMPLE 4 N-(2-Iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide
Figure US07282507-20071016-C00086
A solution of N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-bismethanesulfonamide (18.85 g, 38.61 mmol) in methanol (250 mL) was heated to 50° C. in a water bath. Lithium hydroxide (1.39 g, 57.92 mmol) in a minimal amount of water was added. The solution was stirred for 2 hours, maintaining the temperature between 50 and 60° C., then let stir overnight at room temperature. The solvent was evaporated off and water was added. The water was decanted leaving a brown oil. The water was acidified to pH 1 using concentrated hydrochloric acid. An off-white solid precipitated was formed, it was filtered and washed with water and pentane and dried. The solid was dissolved in ethyl acetate and the solution washed with water, brine, dried over magnesium sulfate, filtered, and evaporated to yield the title compound as an orange solid.
MH−=409
EXAMPLE 5 N-(2-Iodo-4-nitro-5-trifluoromethyl-phenyl)-bismethanesulfonamide
Figure US07282507-20071016-C00087
To a solution of 2-iodo-4-nitro-5-trifluoromethyl-phenylamine (23.4 g, 70.5 mmol) in pyridine (80 mL) was added methanesulfonyl chloride (27.3 mL, 352.5). The reaction was allowed to proceed overnight at room temperature. The pyridine was evaporated and ethyl acetate was added multiple times to the residue and decanted off to yield a brown solid. The brown solid was then filtered off and washed with ethyl acetate. The combined washes were washed with water, 1N hydrochloric acid solution, water, brine, dried over magnesium sulfate, filtrered, and evaporated to yield the title compound as a brown solid.
EXAMPLE 6 2-Iodo-4-nitro-5-trifluoromethyl-phenylamine
Figure US07282507-20071016-C00088
5-Amino-2-nitrobenzotrifluoride (16.25 g, 78.8 mmol) was dissolved in tetrahydrofuran (100 mL) and methanol (100 mL) and to this solution was added p-toluenesulfonic acid (0.18 g, 0.95 mmol) and N-iodosuccinimide (17.8 g, 78.8 mmol). The solution was stirred all day. N-iodosuccinimide (0.78 g, 3.47 mmol) and p-toluenesulfonic acid (0.2 g, 1.05 mmol) were then added and the solution stirred overnight at room temperature under nitrogen. The solution was concentrated under vacuum to a small volume. Water (200 mL) was added to the reaction mixture and and a brown solid precipitated out. The solid was filtered and washed with water, then dissolved in ethyl acetate (100 mL) and diethyl ether (60 mL). The organic solution was washed with 10% sodium thiosulfate solution (50 mL). This created an emulsion which was alleviated by adding diethyl ether and water and filtering undissolved material. The layers were separated and the organic layer was washed with 10% sodium thiosulfate solution (50 mL), water was then added to the aqueous layer and the layers separated. The organic layer was washed with brine (50 mL), dried over magnesium sulfate, filtered, and evaporated to yield the title compound as a brown solid that was dried under vacuum.
MH−=331
EXAMPLE 7 1-(3,4-Dichloro-phenylsulfanyl)-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00089
A solution of 3,4-dichlorobenzenethiol (0.04 mL, 0.29 mmol) in DMF (3 mL) was prepared. To this solution was added diisopropylethylamine (0.05 mL, 0.29 mmol) after which the solution turned yellow. 1-Methanesulfonyl-2-(2-methyl-oxiranyl)-5-nitro-6-trifluoromethyl-1H-indole (53 mg, 0.145 mmol) in DMF (0.5 mL) was added via syringe and the reaction mixture stirred. After 2 hours the solution was added to water and 1N HCl. An off-white solid was filtered off, washed with water, and allowed to dry. The solid was purified by column chromatography eluting with dichloromethane to yield the title compound as an oil.
MH+Na=566
EXAMPLE 8 1-Methanesulfonyl-2-(2-methyl-oxiranyl)-5-nitro-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00090
A solution of 2-isopropenyl-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole (2.55 g, 7.32 mmol) in acetonitrile (18 mL) was prepared. Most of the solid was observed to dissolve in the acteonitrile. Water was added (2 mL) to the reaction mixture resulting in some cloudiness. N-bromosuccinimide was added (1.46 g, 8.20 mmol) followed by additional acetonitrile (5 mL). The reaction was allowed to proceed overnight. Water was added and the solution was extracted twice with diethyl ether. The diethyl ether extracts were washed with water, then brine, dried over magnesium sulfate, filtered, and evaporated to yield a residue. The residue was purified by column chromatography eluting with 30, 50, and 57% diethyl ether in pentane. Some mixed fractions with product were evaporated down and triturated with diethyl ether to yield the title product as a white solid which was filtered off.
MH+Na=387
MH−=285 (loss of methanesulfonyl group)
EXAMPLE 9 2-Isopropenyl-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00091
This compound was prepared using the general Sonagashira conditions as described in general Example C, starting from N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (9.0 g, 21.9 mmol) and 2-methyl-1-buten-3-yne (6.25 mL, 65.7 mmol) to yield the title compound as a reddish-brown solid.
EXAMPLE 10 1-(4-Chloro-phenylsulfanyl)-2-(1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00092
A solution of 1-(4-chloro-phenylsulfanyl)-2-(1-methanesulfonyl-1H-indol-2-yl)-propan-2-ol (0.18 g, 0.46 mmol) in methanol (10 mL) was prepared. 1M Sodium hydroxide (3.2 mL, 3.2 mmol) was then added to the reaction mixture. The reaction did not go to completion after stirring overnight at room temperature. 3N Sodium hydroxide solution was then added and the solution became milky white. The solution gradually became clear. Diethyl ether was added and the layers separated. The aqueous layer was acidified with 1N HCl and extracted with diethyl ether. The diethyl ether extracts were washed with 1N HCl solution, water and brine, dried over magnesium sulfate, filtered, and evaporated to yield crude product. The crude material was purified by column chromatography eluting with 30 and 50% diethyl ether/pentane to yield the title compound as a solid.
MH−=316
EXAMPLE 11 1-(4-Chloro-phenylsulfanyl)-2-(1-methanesulfonyl-1H-indol-2-yl) -propan-2-ol
Figure US07282507-20071016-C00093
A solution of 1-chloro-2-(1-methanesulfonyl-1H-indol-2-yl)-propan-2-ol (0.36 g, 1.25 mmol) in methanol (12 mL) was prepared. To this solution was added 4-chlorothiophenol (0.36 g, 2.50 mmol) dissolved into 0.5 M sodium methoxide in methanol solution (5 mL, 2.50 mmol). The reaction was stirred overnight at room temperature. The solvent was evaporated and 1N HCl was added to the residue. The solution was extracted twice with diethyl ether and the diethyl ether extracts dried over magnesium sulfate, filtered and evaporated to yield a yellow oil. The oil was purified by column chromatography eluting with 30% diethyl ether/pentane to yield the title compound as a clear oil.
MH+Na=418
EXAMPLE 12 1-Chloro-2-(1-methanesulfonyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00094
This compound was prepared using the general Sonagashira procedure as described in General Example C, from N-(2-iodo-phenyl)-methanesulfonamide (1.65 g, 5.55 mmol) and 1-chloro-2-methyl-but-3-yn-2-ol (0.79 g, 6.66 mmol) to yield a brown oil.
EXAMPLE 13 N-(2-Iodo-phenyl)-methanesulfonamide
Figure US07282507-20071016-C00095
This compound was prepared using the general pyridine method, step 2 as described in General Procedures Example F, starting from N-(2-iodo-phenyl)-bismethanesulfonamide (19.27 g, 51.36 mmol) to yield the title compound as a browm solid.
MH−=296
EXAMPLE 14 N-(2-Iodo-phenyl)-bismethanesulfonamide
Figure US07282507-20071016-C00096
This compound was prepared using the general pyridine method, step 1, as described in the General Procedure Example E, starting from 2-iodoaniline (20 g, 91.31 mmol) to yield the title compound as a brown solid.
MH−=296, loss of methanesulfonyl group
EXAMPLE 15 2-(5-Chloro-6-trifluoromethyl-1H-indol-2-yl)-1-(4-fluoro-benzenesulfonyl) -propan-2-ol
Figure US07282507-20071016-C00097
To a solution of 2-(5-chloro-6-trifluoromethyl-1H-indol-2-yl)-1-(4-fluoro -phenylsulfanyl)-propan-2-ol (0.42 g, 1.04 mmol) in dichloromethane (10 mL) was added water (10 mL). The solution was stirred rapidly and tetrabutylammonium hydrogensulfate (12 mg, 0.035 mmol) was added followed by OXONE® (1.02 g, 1.66 mmol). The reaction mixture turned bright yellow and was allowed to proceed overnight at room temperature. The reaction mixture was diluted with water and dichloromethane, the layers were separated and the aqueous layer was extracted with dichloromethane. The combined organic layers were washed with water, twice with 10% sodium thiosulfate soluton and brine, then dried over magnesium sulfate. The magnesium sulfate was filtered off and the filtrate was concentrated and pre-absorbed onto silica gel and purified by column chromatography eluting with 80% diethyl ether/pentane to yield the title product as a solid.
1H NMR (400 MHz, CDCl3) δ 8.88 (brs, 1H), 7.75 dd, J=5.0, 8.8 Hz, 2H), 7.70 (s, 1H), 7.53 (s, 1H), 7.05 (t, J=8.4, 2H), 6.04 (s, 1H), 4.76 (s, 1H), 3.71 (d, J=14.6, 1H), 3.65 (d, J=14.5, 1H), 1.85 (s, 3H)
MH−=434.
EXAMPLE 16 1-Ethanesulfinyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol and 1-Ethanesulfonyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00098
These compounds were prepared using the general oxidation procedure as described in the General Procedures Example A, employing less OXONE® (0.35 g, 0.57 mmol). The starting material was 1-ethylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (Assigned stereochemistry is R) (0.4 g, 1.1 mmol). The crude material was purified by column chromatography eluting with 3% methanol in diethyl ether. The first compound that came off was Compound #156, which was isolated as a solid.
MH+23=403
The next compound that came off the column was Compound #155, which was isolated as a solid.
MH+23=387
EXAMPLE 17 1-Ethylsulfanyl-2-(5-fluoro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00099
This compound was prepared using the general de-protection procedure as described in the General Procedure Example B. The starting material used was 1-ethylsulfanyl-2-(5-fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (0.8 g, 2.0 mmol) and the base used was 4M sodium hydroxide (1 mL, 4.0 mmol). The product was obtained as a solid.
MH+=304 which is a loss of water
EXAMPLE 18 1-Ethylsulfanyl-2-(5-fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00100
This compound was prepared using the general Sonagashira procedure as described in the General Procedures Example C. The starting material was N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.77 g, 2.0 mmol) and 1-ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.29 g, 2.0 mmol), reacted to yield the title compound as a golden oil.
MH+Na=422
EXAMPLE 19 N-(4-Fluoro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide
Figure US07282507-20071016-C00101
This compound was prepared using the general pyridine method, step 2 as described in the General Procedure Example F. The starting material was N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-bismethanesulfonamide (8.2 g, 17.8 mmol) which was reacted to yield the title compound as an orange solid.
MH−=382
EXAMPLE 20 N-(4-Fluoro-2-iodo-5-trifluoromethyl-phenyl)-bismethanesulfonamide
Figure US07282507-20071016-C00102
This compound was prepared using the general pyridine procedure, step 1 as described in the General Procedure Example E. The starting material used was 4-fluoro-2-iodo-5-trifluoromethyl-phenylamine (5.6 g, 18.36 mmol), which was reacted to yield the title compound as a solid.
MH−=382, loss of methanesulfonyl group
EXAMPLE 21 4-Fluoro-2-iodo-5-trifluoromethyl-phenylamine
Figure US07282507-20071016-C00103
This compound was prepared using the standard iodination procedure, as described in General Procedures Example H, to yield the title compound as a reddish-brown oil.
MH+=306
EXAMPLE 22 2-(5-Amino-6-trifluoromethyl-1H-indol-2-yl)-1-ethylsulfanyl-propan-2-ol
Figure US07282507-20071016-C00104
A solution of 1-ethylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (0.35 g, 1.0 mmol) in ethanol. (20 mL) was prepared. To the solution was then added saturated ammonium chloride solution (20 mL). Indium was added (1.15 g, 10 mmol) and the reaction heated to reflux. After one-half hour the reaction was complete. The reaction mixture was filtered through Celite and the Celite washed with water and diethyl ether. The layers were separated and the aqueous layer extracted with diethyl ether. The organic layers were dried over magnesium sulfate, filtered, and evaporated to yield a residue. The residue was dissolved in dichloromethane and purified by column chromatography eluting with 1:1 diethyl ether/hexanes to yield the title compound as a solid.
MH+=319
EXAMPLE 23 2-(2-Ethylsulfanyl-1-methoxy-1-methyl-ethyl)-5-nitro-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00105
This compound was prepared using the general de-protection procedure, as described in General Procedures Example. The starting material used was 2-(2-ethylsulfanyl-1-methoxy-1-methyl-ethyl)-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole (0.17 g, 0.39 mmol). The base used was 4N sodium hydroxide (0.19 mL, 0.77 mmol). The title compound was obtained as a yellow solid.
M+23=385
EXAMPLE 24 2-(2-Ethylsulfanyl-1-methoxy-1-methyl-ethyl)-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00106
This compound was prepared using the standard Sonagashira procedure as described in General Procedures Example C. The starting material was N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.34 g, 0.82 mmol) and 4-ethylsulfanyl-3-methoxy-3-methyl-but-1-yne (0.13 g, 0.82 mmol), reacted to yield the title compound as a yellow film.
EXAMPLE 25 4-Ethylsulfanyl-3-methoxy-3-methyl-but-1-yne
Figure US07282507-20071016-C00107
1-Ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.29 g, 2.0 mmol) was added to a mixture of sodium hydride (60% dispersion in mineral oil, 88 mg, 2.2 mmol) in dimethylformamide (5 mL) under argon. Iodomethane (0.12 mL, 2.0 mmol) was then added to the reaction mixture via syringe and the mixture allowed to stir overnight. The mixture was poured onto water and extracted twice with diethyl ether. The diethyl ether extracts were washed with water and brine, dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil. The oil was purified by column chromatography eluting with dichloromethane to yield the title compound as a clear liquid.
Product does not mass.
EXAMPLE 26 2-Ethanesulfinyl-1-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol
Figure US07282507-20071016-C00108
This compound was prepared using the general oxidation procedure as described in General Procedures Example B, starting from 2-ethylsulfanyl-1-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol (0.36 g, 1.08 mmol) to yield the title compound as a solid.
MH+23(Na)=373, MH−=349
EXAMPLE 27 2-Ethylsulfanyl-1-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol
Figure US07282507-20071016-C00109
This compound was prepared using the general de-protection procedure described in General Procedures Example B, starting from 2-ethylsulfanyl-1-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol (1.52 g, 3.69 mmol) and 4M sodium hydroxide as base (1.8 mL, 7.38 mmol) to yield the title compound as a bright yellow solid.
MH−=333, MH+23(Na)=357.
EXAMPLE 28 2-Ethylsulfanyl-1-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanol
Figure US07282507-20071016-C00110
This compound was prepared using the general Sonagashira procedure as described in General Procedures Example C, starting from N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (1.89 g, 4.6 mmol) and 1-ethylsulfanyl-but-3-yn-2-ol (0.6 g, 4.6 mmol), reacted to yield the title compound as a yellow solid.
MH+23(Na)=435
EXAMPLE 29 Ethylsulfanyl-but-3-yn-2-ol
Figure US07282507-20071016-C00111
This compound was prepared from the general alkyne procedure as described in General Procedures Example D, starting from 0.5M ethynylmagnesium bromide (25 mL, 12.58 mmol) and ethylsulfanyl-acetaldehyde (1.31 g, 12.58 mmol), reacted to yield the title compound as a yellow oil.
EXAMPLE 30 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00112
This compound was prepared using the standard de-protection procedure, as described in General Procedure Example B, starting from 2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.65 g, 1.31 mmol) and using 4N sodium hydroxide as base (1 mL, 4.0 mmol) to yield the title compound as a solid.
MH−=415, MH+23=439
EXAMPLE 31 2-(1-Methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00113
This compound was prepared using the general Sonagashira procedure as described in General Procedures Example C, reacting N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.62 g, 1.5 mmol) and 3-(2,2,2-Trifluoro-ethylsulfanylmethyl)-pent-1yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a yellow sticky oil.
MH+23=517, MH−=415, loss of methanesulfonyl group
EXAMPLE 32 2-(5-Chloro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00114
This compound was prepared using the standard de-protection procedure from, as described in General Procedures Example B, reacting 2-(5-chloro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.24 g, 0.50 mmol) and using 4N sodium hydroxide as a base (0.37 mL, 0.50 mmol) to yield the title compound as a yellow sticky oil.
MH−=404
EXAMPLE 33 2-(5-Chloro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifuloro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00115
This compound was prepared using the standard Sonagashira procedure as described in General Procedures Example C, reacting from N-(4-chloro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.60 g, 1.5 mmol) and 3-(2,2,2-Trifluoro-ethylsulfanylmethyl)-pent-1 yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a yellow sticky oil.
MH−=404, loss of methanesulfonyl group
EXAMPLE 34 2-(3-Chloro-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfonyl)-butan-2-ol
Figure US07282507-20071016-C00116
A solution of 2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfonyl)-butan-2-ol (100 mg, 0.22 mmol) in tetrahydrofuran (5 mL) was prepared. To this solution was added N-chlorosuccinimide (33 mg, 0.25 mmol). The solution was stirred overnight at room temperature. Water was added and the solution extracted twice with diethyl ether. The diethyl ether extracts were dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil. The oil was dissolved in diethyl ether and purified by column chromatography eluting with diethyl ether to yield the title compound as a yellow powder.
MH+23=505, MH−=481
EXAMPLE 35 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfonyl)-butan-2-ol
Figure US07282507-20071016-C00117
This compound was prepared using the general oxidation procedure as describe in General Procedures Example A. The starting material used was 2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfanyl)-butan-2-ol (0.25 g, 0.61 mmol), which was reacted to yield the title compound as a yellow, fluffy solid.
M+23=471
EXAMPLE 36 2-(5-Fluoro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00118
This compound was prepared using the general de-protection procedure as describe in General Procedures Example B, reacting 2-(5-fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol (0.59 g, 1.26 mmol) and using 4N sodium hydroxide as base (1 mL, 4.0 mmol) to yield the title compound as a solid.
MH−=388
EXAMPLE 37 2-(5-Fluoro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-butan-2-ol
Figure US07282507-20071016-C00119
This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(4-fluoro-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (0.57 g, 1.5 mmol) and 3-(2,2,2-trifluoro-ethylsulfanylmethyl)-pent-1yn-3-ol (0.32 g, 1.5 mmol) to yield the title compound as a brown oil.
MH+Na=490, MH−=388, loss of methanesulfonyl group
EXAMPLE 38 1-Butylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00120
This compound was prepared using the general de-protection procedure as describe in General Procedures Example B. The starting material used was 1-butylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol (0.53 g, 1.16 mmol). The base that was used was 4N sodium hydroxide solution (1 mL, 4 mmol). The title compound was obtained as a yellow sticky oil.
MH−=375
EXAMPLE 39 1-Butylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00121
This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(2-iodo-4-nitro-5-trifluoromethyl-phenyl)-methanesulfonamide (0.82 g, 2.0 mmol) and 3-methyl-hept-1-yn-3-ol (0.34 g, 2.0 mmol) to yield the title compound as a yellow oil.
MH+23=477
EXAMPLE 40 1-Butylsulfanyl-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00122
This compound was prepared using the general alkyne procedure as describe in General Procedures Example D, reacting 0.5M ethynylmagnesium bromide (35.6 mL, 17.78 mmol) and hexan-2-one (2.6 g, 17.78 mmol) to yield the title compound as a yellow liquid.
EXAMPLE 41 1-Butylsulfanyl-propan-2-one
Figure US07282507-20071016-C00123
A solution of 1-butanethiol (2.1 mL, 20.0 mmol) in methanol (133 mL) was prepared and cooled in an ice bath under an argon atmosphere. 1M Sodium hydroxide was then added (20 mL, 20 mmol), followed by addition of chloroacetone (1.9 mL, 24.0 mmol). The reaction solution was stirred cold for two hours and then concentrated on a rotary evaporator. Water was added and the mixture extracted twice with diethyl ether. The diethyl ether extracts were dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil. The oil was used without further purification.
EXAMPLE 42 2-(6-Chloro-5-fluoro-1H-indol-2-yl)-1-ethylsulfanyl-propan-2-ol
Figure US07282507-20071016-C00124
To a solution of 2-(6-chloro-5-fluoro-1-methanesulfonyl-1H-indol-2-yl)-1-ethylsulfanyl-propan-2-ol (0.30 g, 0.82 mmol) in methanol (10 mL) was added 4M sodium hydroxide solution (0.4 mL). The reaction was allowed to proceed overnight at room temperature. Complete reaction was not achieved, so additional 1M sodium hydroxide solution (1 mL) was added and the reaction mixture was heated to 50° C. The reaction mixture was kept at 50° C. for two hours then allowed to stir overnight at room temperature. The reaction mixture was concentrated and to the concentrate was added 1N hydrochloric acid solution and water. The mixture was extracted twice with ethyl ether. The extracts were dried over Mg2SO4, filtered, and evaporated to yield a residue. The residue was purified by column chromatography eluting with dichloromethane to yield the title compound as a yellow oil.
MH−=286
1H NMR (400 MHz, CDCl3) δ 8.56 (brs, 1H), 7.35 (q, J=6.1 Hz, 1H), 2.57 (q, J=7.2 Hz, 2H), 1.05 (t, J=7.2 Hz, 3H).
EXAMPLE 43 2-(6-Chloro-5-fluoro-1-methanesulfonyl-1H-indol-2-yl)-1-ethylsulfanyl-propan-2-ol
Figure US07282507-20071016-C00125
To a 50 mL round-bottom flask were added N-(5-chloro-4-fluoro-2-iodo-phenyl)-methanesulfonamide (0.30 g, 1.0 mmol), bis(triphenylphosphine) palladium(II) chloride (35 mg, 0.05 mmol) and copper (I) iodide (19 mg, 0.1 mmol). The flask was fitted with a septum and stirred under argon. Tetrahydrofuran (5 mL) and triethylamine (0.28 mL, 2.0 mmol) were then added via syringe. 1-Ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.14 g, 1.0 mmol) in tetrahydrofuran (1 mL) was added via syringe and the reaction maintained with stirring at 50-60° C. for four hours. The solution was evaporated and the residue purified by column chromatography using dichloromethane as solvent to yield the title compound as a brown oil.
MH+Na=388, MH− shows a loss of water at 348
EXAMPLE 44 1-Ethylsulfanyl-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00126
A solution of 0.5M ethynyl magnesium bromide (60 mL, 30 mmol) was cooled in an ice bath under argon. (Ethylthio)acetone (3.55 g, 30 mmol) was added dropwise via syringe. The reaction mixture was stirred overnight at room temperature. The reaction mixture was then poured onto a saturated ammonium chloride solution and then extracted twice with diethyl ether, dried over magnesium sulfate, filtered, and evaporated to yield a yellow oil. The oil was purified by column chromatography eluting with dichloromethane to yield the title compound as a yellow liquid.
EXAMPLE 45 2-(2-Ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile
Figure US07282507-20071016-C00127
This compound was prepared using the general de-protection procedure as describe in General Procedures Example B, reacting 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-1-methanesulfonyl-6-trifluoromethyl-1H-indole-5-carbonitrile (219 mg, 0.54 mmol) and using 4M sodium hydroxide (0.40 mL, 1.62 mmol) as the base, to yield the title compound as a white solid.
MH−=327
EXAMPLE 46 2-(2-Ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-1-methanesulfonyl-6-trifluoromethyl-1H-indole-5-carbonitrile
Figure US07282507-20071016-C00128
This compound was prepared using the general Sonagashira procedure as describe in General Procedures Example C, reacting N-(4-cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (1.0 g, 2.56 mmol) and 1-ethylsulfanyl-2-methyl-but-3-yn-2-ol (0.37 g, 2.56 mmol) to yield the title compound as a yellow sticky oil.
MH−=327, loss of methanesulfonyl group. MH+23(Na)=429
EXAMPLE 47 1-Cyclopentylsulfanyl-propan-2-one
Figure US07282507-20071016-C00129
Cyclopentyl mercaptan (6.72 mL, 62.8 mmoL) in THF (50 mL) was treated with NaH (60%, 69.1 mmoL, 2.76 g) at 0° C. After bubbling ceased, chloroacetone (5.0 mL, 62.8 mmoL) was added into the reaction mixture via syringe slowly. The reaction mixture was then stirred at 0° C. for 2 hrs. The solvent was then removed and water and Et2O were added. The Et2O layer was washed with brine, dried over Na2SO4 and concentrated to yield the title compound as an oil.
1H NMR (CDCl3, 400 MHz) δ 3.22 (s, 2H), 2.95 (m, 1H), 2.28 (s, 3H), 2.05˜1.48 (m, 8H).
EXAMPLE 48 1-Isopropylsulfanyl-propan-2-one
Figure US07282507-20071016-C00130
Isopropyl mercaptan (5.83 mL, 62.8 mmoL) in THF (50 mL) was treated with NaH (60%, 69.1 mmoL, 2.76 g) at 0° C. After bubbling ceased, chloroacetone (62.8 mmoL, 5 mL) was added into the reaction mixture via syringe slowly. The reaction mixture was then stirred at 0° C. for 2 hrs. The solvent was then removed and water and Et2O were added. The Et2O layer was washed with brine, dried over Na2SO4 and concentrated to yield the title compound as an oil.
1H NMR (CDCl3, 400 MHz) δ 3.25 (s, 2H), 2.95 (m, 1H), 2.30 (s, 3H), 1.20 (d, J=12.0 Hz, 3H), 1.15 (d, J=12.0 Hz, 3H).
EXAMPLE 49 1-(2,2,2-Trifluoro-ethylsulfanyl)-propan-2-one
Figure US07282507-20071016-C00131
2,2,2-Trifluoroethanethiol (5.59 mL, 62.8 mmoL) in THF (50 mL) was treated with NaH (60%, 69.1 mmoL, 2.76 g) at 0° C. After bubbling ceased, chloroacetone (62.8 mmoL, 5 mL) was added into the reaction mixture via syringe slowly. The reaction mixture was then stirred at 0° C. for 2 hrs. The solvent was then removed and water and Et2O were added. The Et2O layer was washed with brine, dried over Na2SO4 and concentrated to yield the title compound as an oil.
1H NMR (CDCl3, 400 MHz) δ 3.40 (s, 2H), 3.15 (abq, J=12.0 Hz, 2H), 2.31 (s, 3H).
EXAMPLE 50 1-Isopropylsulfanyl-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00132
Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 48 (0.80 g, 6.06 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH4Cl was added to quench the reaction. THF was removed and Et2O was added. The aqueous phase was extracted with Et2O and the combined organic layer was Washed with brine, dried and concentrated to yield the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
1H NMR (CDCl3, 400 MHz) δ 3.18 (m, 1H), 3.05 (d, J=10.5 Hz, 1H), 2.72 (d, J=10.5 Hz, 1H), 2.42 (s, 1H), 2.38 (s, 1H), 1.55 (s, 3H), 1.28 (d, J=13.5 Hz, 3H), 1.24 (d, J=13.5 Hz, 3H).
EXAMPLE 51 1-Cyclopentylsulfanyl-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00133
Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 47 (1.0 g, 6.33 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH4Cl was added to quench the reaction. THF was removed and Et2O was added. The aqueous phase was extracted with Et2O and the combined organic layer was washed with brine, dried and concentrated to give the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
1H NMR (CDCl3, 400 MHz) δ 3.30 (m, 1H), 3.21 (d, J=11.0 Hz, 1H), 2.75 (d, J=11.0 Hz, 1H), 2.42 (s, 1H), 2.05 (m, 2H), 1.80 (m, 2H), 1.55 (s, 3H), 1.60˜1.40 (m, 4H).
EXAMPLE 52 2-Methyl-1-(2,2,2-trifluoro-ethylsulfanyl)-but-3-yn-2-ol
Figure US07282507-20071016-C00134
Ethynyl magnesium bromide (0.5 M in THF, 12.12 mmoL, 25 mL) was added dropwise into a solution of the compound prepared as in Example 49 (1.05 g, 6.10 mmoL) at 0° C. After addition, the reaction mixture was stirred for another 30 min at 0° C. Saturated NH4Cl was added to quench the reaction. THF was removed and Et2O was added. The aqueous phase was extracted with Et2O and the combined organic layer was washed with brine, dried and concentrated to yield the crude title compound as a clear oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a colorless oil.
1H NMR (400 MHz, CDCl3) δ 3.40 (m, 1H), 3.25 (m, 1H), 3.10 (abq, J=12.5 Hz, 1H), 2.85 (abq, J=12.5 Hz, 1H), 2.78 (s, 1H), 2.54 (s, 1H), 1.60 (s, 3H).
EXAMPLE 53 1-Ethylsulfanyl-2-methyl-pent-3-yn-2-ol
Figure US07282507-20071016-C00135
(Ethylthio)acetone (3.0 g, 25.4 mmoL) was treated dropwise with CH3CCMgBr (0.5 M, 28.0 mmoL, 56 mL) at 0° C. After addition, the reaction was stirred for additional 30 min and then quenched with saturated NH4Cl. THF was removed in vacuo. Water and Et2O were added and the aqueous layer was exacted 3× with Et2O. The combined organic layer was washed with brine, dried over anhydrous Na2SO4, filtered and concentrated to yield crude title product as a yellow oil. The crude material was then purified by column chromatography (silica gel, hexanes:EtOAc 6:1 as eluent) to yield the title compound as a colorless oil.
1H NMR (CDCl3, 400 MHz) δ 3.48 (dd, J=10.5, 4.8 Hz, 1H), 3.10 (s, 1H), 3.02 (d, J=15.0 Hz, 1H), 2.72 (dd, J=10.5, 2.0 Hz, 1H), 2.70 (d, J=15.0 Hz, 1H), 1.86 (s, 3H), 1.52 (s, 3H), 1.25 (t, J=15.0 Hz, 3H).
EXAMPLE 54 1-Benzylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00136
The compound prepared as in Example 4 (500 mg, 1.32 mmoL), PdCl2(Ph3P)2 (186 mg, 0.265 mmoL), CuI (50 mg, 0.265 mmoL) and TEA (1 mL, 6.70 mmoL) in THF (10 mL) was degassed with N2 for 5 min. Benzylsulfanyl-2-methyl-but-3-yn-2-ol, the compound prepared as in Examples 49-52 substituting phenylmethyl-thiol for trifluoroethanethiol (300 mg, 1.46 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.60 (s, 1H), 8.06 (s, 1H), 7.28˜7.18 (m, 5H), 6.75 (s, 1H), 4.08 (s, 1H), 3.68 (s, 2H), 3.32 (s, 3H), 3.30 (d, J=12.0 Hz, 1H), 3.12 (d, J=12.0 Hz, 1H), 1.78 (s, 3H)
MS (m/z): 489 (M+H)+
EXAMPLE 55 1-Benzylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00137
The compound prepared as in Example 54 (565 mg, 1.16 mmoL) in 4 N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.18 (br, s, 1H), 8.18 (s, 1H), 7.75 (s, 1H), 7.35˜7.14 (m, 5H), 6.42 (s, 1H), 3.69 (s, 2H), 3.08 (d, J=10.5 Hz, 1H), 2.92 (d, J=10.5 Hz, 1H), 1.62 (s, 3H)
MS (m/z): 411 (M+H)+, 433 (M+Na)+.
EXAMPLE 56 1-Isopropylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00138
The compound prepared as in Example 4 (225 mg, 0.595 mmoL), PdCl2(Ph3P)2 (84 mg, 0.119 mmoL), CuI (23 mg, 0.119 mmoL) and TEA (0.4 mL, 2.98 mmoL) in THF (10 mL) was degassed with N2 for 5 min. The compound prepared as in Example 50 (300 mg, 1.46 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.65 (s, 1H), 8.16 (s, 1H), 6.85 (s, 1H), 4.08 (s, 1H), 3.50 (s, 3H), 3.48 (d, J=10.5 Hz, 1H), 3.15 (d, J=10.5 Hz, 1H), 2.92 (m, J=11.0 Hz, 1H), 1.82 (s, 3H), 1.22 (d, J=11.0 Hz, 6H)
MS (m/z): 441 (M+H)+, 463 (M+Na)+.
EXAMPLE 57 1-Isopropylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00139
The compound prepared as in Example 56 (125 mg, 0.284 mmoL) in 4 N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.28 (br, s, 1H), 8.22 (s, 1H), 7.78 (s, 1H), 6.52 (s, 1H), 3.45 (br, s, 1H), 3.12 (s, 2H), 3.04 (d, J=10.5 Hz, 1H), 2.82 (m, 1H), 2.65 (d, J=10.5 Hz, 1H), 1.68 (s, 3H), 1.25 (d, J=11.0 Hz, 6H)
MS (m/z): 363 (M+H)+.
EXAMPLE 58 2-(1-Methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-propan-2-ol
Figure US07282507-20071016-C00140
The compound prepared as in Example 4 (1.75 g, 4.63 mmoL), PdCl2(Ph3P)2 (650 mg, 0.93 mmoL), CuI (177 mg, 0.93 mmoL) and TEA (3.23 mL, 23.15 mmoL) in THF (30 mL) were degassed with N2 for 5 min. The compound prepared as in Example 52 (917 mg, 4.63 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.62 (s, 1H), 8.11 (s, 1H), 6.82 (s, 1H), 4.05 (s, 1H), 3.55 (d, J=10.5 Hz, 1H), 3.40 (s, 3H), 3.32 (d, J=10.5 Hz, 1H), 3.25˜3.12 (m, 2H), 1.82 (s, 3H)
MS (m/z): 481 (M+H)+.
EXAMPLE 59 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethylsulfanyl)-propan-2-ol
Figure US07282507-20071016-C00141
The compound prepared as in Example 58 (1.45 g, 3.02 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.25 (br, s, 1H), 8.21 (s, 1H), 7.80 (s, 1H), 6.48 (s, 1H), 3.25 (d, J=11.0 Hz, 1H), 3.15 (d, J=11.0 Hz, 1H), 3.10 (abq, J=10.5 Hz, 2H), 2.92 (s, 1H), 1.78 (s, 3H)
MS (m/z): 403 (M+H)+, 425 (M+Na)+.
Chiral Separation, CH3CN as Eluent:
Peak 1, the (−) enantiomer
    • [α]D 20 −54 (c 0.21, MeOH)
Peak 2, the (+) enantiomer
    • [α]D 20 +56 (c 0.14, MeOH)
EXAMPLE 60 1-Cyclopentylsulfanyl-2-(1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00142
The compound prepared as in Example 4 (460 mg, 0.94 mmoL), PdCl2(Ph3P)2 (132 mg, 0.188 mmoL), CuI (36 mg, 0.188 mmoL) and Et3N (0.66 mL, 4.70 mmoL) in THF (10 mL) were degassed with N2 for 5 min. The compound prepared as in Example 51 (190 mg, 1.034 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.55 (s, 1H), 8.05 (s, 1H), 6.81 (s, 1H), 4.02 (s, 1H), 3.38 (d, J=11.5 Hz, 1H), 3.35 (s, 3H), 3.12 (d, J=11.5 Hz, 1H), 3.08 (m, 1H), 1.75 (s, 3H), 1.70˜1.60 (m, 2H), 1.60˜1.35 (m, 4H)
MS (m/z): 468 (M+H)+, 490 (M+Na)+.
EXAMPLE 61 1-Cyclopentylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00143
The compound prepared as in Example 58 (395 mg, 0.848 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.28 (br, s, 1H), 8.20 (s, 1H), 7.78 (s, 1H), 6.45 (s, 1H), 3.35 (s, 0.1H), 3.20 (d, J=11.0 Hz, 1H), 3.05 (d, J=11.0 Hz, 1H), 3.02 (m, 1H), 2.01 (m, 2H), 2.75 (m, 2H), 1.70 (s, 3H), 1.60˜1.45 (m, 4H)
MS (m/z): 389 (M+H)+.
EXAMPLE 62 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-propylsulfanyl-propan-2-ol
Figure US07282507-20071016-C00144
The compound prepared as in Example 4 (300 mg, 0.732 mmoL), PdCl2(Ph3P)2 (102 mg, 0.15 mmoL), CuI (29 mg, 0.15 mmoL) and Et3N (0.26 mL, 1.83 mmoL) in THF (5 mL) was degassed with N2 for 5 min. 2-Methyl-1-propylsulfanyl-but-3-yn-2-ol, the compound prepared as in Example 49-52 substituting propanethiol for trifluoroethanethiol (174 mg, 1.1 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a brown oil. The crude material in 4N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.26 (br, s, 1H), 8.22 (s, 1H), 7.79 (s, 1H), 6.48 (s, 1H), 3.39 (s, 1H), 3.20 (abq, J=14.3 Hz, 1H), 3.05 (abq, J=14.3 Hz, 1H), 2.46 (m, 2H), 1.69 (s, 3H), 1.58 (m, J=7.3 Hz, 2H), 0.94 (t, J=7.3 Hz, 3H)
MS (m/z): 363 (M+H)+.
EXAMPLE 63 1-Ethylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
Figure US07282507-20071016-C00145
The compound prepared as in Example 4 (300 mg, 0.732 mmoL), PdCl2(Ph3P)2 (102 mg, 0.15 mmoL), CuI (29 mg, 0.15 mmoL) and Et3N (0.26 mL, 1.83 mmoL) in THF (5 mL) was degassed with N2 for 5 min. 3-Ethylsulfanyl-but-3-yn-2-ol, the compound prepared as in Example 49-52 substituting ethanethiol for trifluoroethanethiol and substituting 1-bromobutan-2-one for chloroacteone (174 mg, 1.1 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, concentrated to yield a crude brown oil. The crude oil in 4N NaOH/MeOH solution (2 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.35 (br, s, 1H), 8.25 (s, 1H), 7.78 (s, 1H), 6.45 (s, 1H), 3.40 (s, 1H), 3.21 (d, J=11.0 Hz, 1H), 3.05 (d, J=11.0 Hz, 1H), 2.75 (m, 1H), 2.60 (m, 1H), 1.98 (m, J=11.0 Hz, 2H), 1.20 (t, J=11.0 Hz, 3H), 0.90 (t, J=11.0 Hz, 3H)
MS (m/z): 363 (M+H)+, 385 (M+Na)+.
EXAMPLE 64 2-(1-Methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-4-methylsulfanyl-butan-2-ol
Figure US07282507-20071016-C00146
The compound prepared as in Example 4 (300 mg, 0.732 mmoL), PdCl2(Ph3P)2 (102 mg, 0.15 mmoL), CuI (29 mg, 0.15 mmoL) and Et3N (0.25 mL, 1.83 mmoL) in THF (5 mL) was degassed with N2 for 5 min. 3-Methyl-5-methylsulfanyl-pent-1-yl-3-ol, the compound prepared as in Example 52 substituting 4-methylsulfanyl-butan-2-one for 1-(2,2,2-trifluoroethylsulfanyl)-propan-2-one, (174 mg, 1.10 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 2 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) 68.68 (s, 1H), 8.12 (s, 1H), 6.80 (s, 1H), 4.21 (s, 1H), 2.78 (m, 1H), 2.68 (m, 1H), 2.20 (s, 3H), 2.05 (m, 2H), 1.82 (s, 3H)
MS (m/z): 427 (M+H)+.
EXAMPLE 65 4-Methylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
Figure US07282507-20071016-C00147
The compound prepared as in Example 64 (264 mg, 0.62 mmoL) in a 4N NaOH/MeOH solution (5 mL) was stirred at room temperature for 30 min. The solvent was removed. CH2Cl2 and H2O were added. The organic layer was washed with brine and dried over anhydrous Na2SO4, concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a light yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.55 (br, s, 1H), 8.15 (s, 1H), 7.72 (s, 1H), 6.36 (s, 1H), 3.82 (s, 1H), 2.70 (m, 1H), 2.60 (m, 1H), 2.10 (s, 3H), 1.98 (m, 2H), 1.65 (s, 3H)
MS (m/z): 371 (M+H)+, 719 (2M+Na)+.
EXAMPLE 66 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(propane-1-sulfonyl)-propan-2-ol
Figure US07282507-20071016-C00148
The compound prepared as in Example 62 (75 mg, 0.21 mmoL) was dissolved in CH2Cl2 (2 mL) and H2O (2 mL). OXONE® (176 mg, 0.31 mmoL) and Bu4NHSO4 (7 mg, 0.02 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH2Cl2 was added and the aqueous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
1H NMR (CDCl3, 400 MHz) δ 10.56 (s, br, 1H), 8.22 (s, 1H), 7.60 (s, 1H), 6.56 (s, 1H), 5.07 (s, 1H0, 3.74 (abq, J=14.7 Hz, 1H), 3.48 (abq, J=14.7 Hz, 1H), 2.80 (m, 2H), 1.88 (s, 3H), 1.81 (m, J=7.40 Hz, 2H), 0.94 (t J=7.4 Hz, 3H)
MS (m/z): 395 (M+H)+.
EXAMPLE 67 4-Methanesulfonyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol and 4-Methanesulfinyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
Figure US07282507-20071016-C00149
The compound prepared as in Example 65 (125 mg, 0.36 mmoL) was dissolved in CH2Cl2 (2 mL) and H2O (2 mL). OXONE® (306 mg, 0.54 mmoL) and Bu4NHSO4 (12 mg, 0.036 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH2Cl2 was added and the aqeous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc to 4:1 CH2Cl2:MeOH as eluent) to yield the title compounds as white solids.
4-Methanesulfonyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
1H NMR (CDCl3, 400 MHz) δ 9.70 (s, 1H), 8.20 (s, 1H), 7.75 (s, 1H), 6.48 (s, 1H), 3.38 (br, s, 1H), 3.20 (m, 1H), 3.05 (m, 1H), 2.90 (s, 3H), 2.45 (m, 2H), 1.72 (s, 3H)
MS (m/z): 403 (M+Na)+.
4-Methanesulfinyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
1H NMR (CDCl3, 400 MHz) δ 10.50 (s, br, 1H), 8.20 (s, 1H), 7.78 (s, 1H), 6.42 (s, 1H), 2.95 (m, 1H), 2.75 (m, 1H), 2.60 (s, 3H), 2.55 (t, J=10.5 Hz, 2H), 1.75 (s, 3H)
MS (m/z): 365 (M+H)+.
EXAMPLE 68 1-Ethanesulfonyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-butan-2-ol
Figure US07282507-20071016-C00150
The compound prepared as in Example 63 (105 mg, 0.29 mmoL) was dissolved in CH2Cl2 (2 mL) and H2O (2 mL). OXONE® (306 mg, 0.54 mmoL) and Bu4NHSO4 (10 mg, 0.03 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH2Cl2 was added and the aqueous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
1H NMR (CDCl3, 400 MHz) δ 9.42 (s, br, 1H), 8.21 (s, 1H), 7.80 (s, 1H), 6.53 (s, 1H), 4.78 (s, 1H), 3.58 (d, J=12.0 Hz, 1H), 3.52 (d, J=12.0 Hz, 1H), 2.80 (q, J=10.5 Hz, 2H), 2.22 (m, 1H), 2.05 (m, 1H), 1.32 (t, J=10.5 Hz, 3H), 085 (t, J=11.0 Hz, 3H)
MS (m/z): 395 (M+H)+.
2-(2-Ethanesulfonyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile, Compound #222
Figure US07282507-20071016-C00151
was similarly prepared according to the procedure described in Example 68 above, by reacting 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile, Compound #217.
MS calculated for C15H15F3N2O3S: 360.08, found 359 (M−H).
2-(2-Ethanesulfonyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile, Compound #251
Figure US07282507-20071016-C00152
was similarly prepared according to the procedure described in Example 68 above, by reacting 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile, Compound #233.
MS calculated for C16H17F3N2O3S: 374.09, found 373 (M−H).
EXAMPLE 69 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfonyl)-propan-2-ol and 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfinyl)-propan-2-ol
Figure US07282507-20071016-C00153
The compound prepared as in Example 59 (201 mg, 0.5 mmoL) was dissolved in CH2Cl2 (2 mL) and H2O (2 mL). OXONE® (425 mg, 0.75 mmoL) and Bu4NHSO4 (17 mg, 0.05 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH2Cl2 was added and the aqueous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc first and then 4:1 CH2Cl2:MeOH as eluent) to yield the title compounds as white solids.
2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfonyl)-propan-2-ol
1H NMR (CD3OD, 400 MHz) δ 8.25 (s, 1H), 7.85 (s, 1H), 6.65 (s, 1H), 4.45˜4.30 (m, 2H), 3.78 (d, J=10.5 Hz, 1H), 3.20 (d, J=10.5 Hz, 1H), 1.90 (s, 3H)
MS (m/z): 457 (M+Na)+.
2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-(2,2,2-trifluoro-ethanesulfinyl)-propan-2-ol
1H NMR (CD3OD, 400 MHz) δ 8.25 (s, 1H), 7.90 (s, 1H), 6.70 (s, 1H), 4.05 (m, 1H), 3.75 (m, 1H), 3.68 (d, J=13.0 Hz, 1H), 3.45 (d, J=13.0 Hz, 1H), 1.86 (s, 3H)
MS (m/z): 441 (M+Na)+.
EXAMPLE 70 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-phenylmethanesulfonyl-propan-2-ol and 2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-phenylmethanesulfinyl-propan-2-ol
Figure US07282507-20071016-C00154
The compound prepared as in Example 55 (252 mg, 0.61 mmoL) was dissolved in CH2Cl2 (2 mL) and H2O (2 mL). OXONE® (380 mg, 0.67 mmoL) and Bu4NHSO4 (5 mg, 0.06 mmoL) were added in one portion into the reaction mixture. The mixture was stirred overnight. CH2Cl2 was added and the aqeous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 1:1 hexanes:EtOAc first and then 4:1 CH2Cl2:MeOH as eluent) to yield the title compounds as white solids.
2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-phenylmethanesulfonyl-propan-2-ol
1H NMR (CD3OD, 400 MHz) δ 8.25 (s, 1H), 7.88 (s, 1H), 7.42 (m, 2H), 7.35 (m, 3H), 6.65 (s, 1H), 4.45 (s, 2H), 3.55 (abq, J=11.5 Hz, 2H), 3.30 (s, 1H), 1.90 (s, 3H)
MS (m.z): 443 (M+H)+.
2-(5-Nitro-6-trifluoromethyl-1H-indol-2-yl)-1-phenylmethanesulfinyl-propan-2-ol
1H NMR (CD3OD, 400 MHz) δ 8.21 (s, 1H), 7.88 (s, 1H), 7.35˜7.25 (m, 5H), 6.55 (s, 1H), 4.20 (d, J=11.0 Hz, 1H), 4.05 (d, J=11.0 Hz, 1H), 3.48 (d, J=11.5 Hz, 1H), 3.28 (d, J=11.5 Hz, 1H), 1.80 (s, 3H)
MS (m/z): 427 (M+H)+.
EXAMPLE 71 5-Chloro-2-isopropenyl-1-methanesulfonyl-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00155
N-(4-cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide, the compound prepared as in Examples 81-82 (2.28 g, 5.69 mmoL), PdCl2(Ph3P)2 (799 mg, 1.14 mmoL) and CuI (271 mg, 1.42 mmoL) in Et3N (10 mL) was degassed with N2 for 5 min. 2-Methyl-1-buten-3-yne (1.06 mL, 11.38 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 3 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crdue brown oil. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.40 (s, 1H), 7.72 (s, 1H), 6.51 (s, 1H), 5.31 (s, 1H), 5.20 (s, 1H), 2.92 (s, 3H), 2.18 (s, 3H)
MS (m/z): 339 (M+H)+, 361 (M+Na)+.
EXAMPLE 72 5-Chloro-1-methanesulfonyl-2-(2-methyl-oxiranyl)-6-trifluoromethyl-1H-indole and 1-(5-Chloro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-ethanone
Figure US07282507-20071016-C00156
The compound prepared as in Example 71 (210 mg, 0.622 mmoL) in CH2Cl2 (5 mL) was treated with mCPBA (129 mg, 0.747 mmoL) at 0° C. The reaction mixture was slowly warmed to room temperature over 2 hrs. The mixture was then washed with saturated NaHCO3, brine and dried over anhydrous Na2SO4, then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the epoxide derivative as a white solid, along with the ketone by-product as a solid.
5-Chloro-1-methanesulfonyl-2-(2-methyl-oxiranyl)-6-trifluoromethyl-1H-indole
1H NMR (CDCl3, 400 MHz) δ 8.38 (s, 1H), 7.68 (s, 1H), 6.69 (s, 2H), 3.18 (s, 3H), 3.05 (m, 2H), 1.78 (s, 3H)
MS (m/z): 380 (M+Na)+.
1-(5-Chloro-1-methanesulfonyl-6-trifluoromethyl-1H-indol-2-yl)-ethanone
1H NMR (CDCl3, 400 MHz) δ 8.42 (s, 1H), 7.80 (s, 1H), 7.28 (s, 1H), 3.78 (s, 3H), 2.62 (s, 3H)
MS (m/z): 341 (M+H)+.
EXAMPLE 73 2-(5-Chloro-6-trifluoromethyl-1H-indol-2-yl)-1-(4-fluoro-phenylsulfanyl)-propan-2-ol
Figure US07282507-20071016-C00157
4-Fluoro-phenyl thiol (55 mg, 0.425 mmoL) was treated with NaH (60%, 17 mg, 0.425 mmoL) in THF (2 mL) at 0° C. After 10 min., 5-chloro-1-methanesulfonyl-2-(2-methyl-oxiranyl)-6-trifluoromethyl-1H-indole, the epoxide derivative compound prepared as in Example 72 (100 mg, 0.425 mmoL) in THF (1 mL) was added into the reaction via syringe. The reaction was slowly warmed to room temperature. THF was removed and the residue was partitioned between CH2Cl2 and water. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
EXAMPLE 74 2-Isopropenyl-1-methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indole
Figure US07282507-20071016-C00158
The compound prepared as in Example 4 (1.2 g, 2.08 mmoL), PdCl2(Ph3P)2 (290 mg, 0.415 mmoL), CuI (80 mg, 0.415 mmoL) and Et3N (4.16 mmoL, 0.58 mL) in THF (10 mL) was degassed with N2 for 5 min. 2-Methyl-1-buten-3-yne (0.3 mL, 3.12 mmoL) was added dropwise into the reaction mixture via syringe at room temperature. The reaction was stirred for 3 hrs. The solvent was then removed and Et2O was added into the residue. The mixture was then filtrated through a pad of Celite and the filtrate was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude brown oil. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the title compound as a yellow oil.
1H NMR (CDCl3, 400 MHz) δ 8.52 (s, 1H), 8.12 (s, 1H), 6.68 (s, 1H), 5.45 (s, 1H), 5.32 (s, 1H), 3.08 (s, 3H)
MS (m/z): 349 (M+H)+.
EXAMPLE 75 1-Methanesulfonyl-2-(2-methyl-oxiranyl)-5-nitro-6-trifluoromethyl-1H-indole and 1-(1-Methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanone
Figure US07282507-20071016-C00159
The compound prepared as in Example 9 (955 mg, 2.74 mmoL) in CH2Cl2 (20 mL) was treated with mCPBA (1.80 g, 8.22 mmoL) at 0° C. The reaction mixture was slowly warmed to room temperature over 2 hrs. The mixture was then washed with saturated NaHCO3, brine and dried over anhydrous Na2SO4, then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 4:1 hexanes:EtOAc as eluent) to yield the epoxide derivative as a white solid, along with the ketone by-product as a solid.
1-Methanesulfonyl-2-(2-methyl-oxiranyl)-5-nitro-6-trifluoromethyl-1H-indole
1H NMR (CDCl3, 400 MHz) δ 8.68 (s, 1H), 8.35 (s, 1H), 6.85 (s, 1H), 3.31 (s, 3H); 3.15 (m, 2H), 1.80 (s, 3H)
MS (m/z): 365 (M+H)+, 387 (M+Na)+.
1-(1-Methanesulfonyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-ethanone
1H NMR (CDCl3, 400 MHz) δ 8.71 (s, 1H), 8.32 (s, 1H), 7.40 (s, 1H), 3.75 (s, 3H), 2.70 (s, 3H)
MS (m/z): 351 (M+H)+.
EXAMPLE 76 1-Isobutylsulfanyl-2-(5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00160
NaH (28 mg, 0.70 mmoL) was added into 2-methylpropylthiol (0.06 mL, 0.56 mmoL) in THF (2 mL) at 0° C. After bubbling ceased, the mixture was stirred for additional 30 min. 1-Methanesulfonyl-2-(2-methyl-oxiranyl)-5-nitro-6-trifluoromethyl-1H-indole, the epoxide derivative compound prepared as in Example 75, (100 mg, 0.28 mmoL) in THF (2 mL) was added dropwise and the reaction was stirred, increasing the temperature from 0° C. to room temperature. Saturated NH4Cl was added to quench the reaction. THF was removed followed by addition of CH2Cl2 and the aqueous phase was extracted 3× with CH2Cl2. The combined organic phase was washed with brine, dried over anhydrous Na2SO4, then concentrated to yield a crude pale solid. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
1H NMR (CDCl3, 400 MHz) δ 9.72 (br, s, 1H), 8.25 (s, 1H), 7.78 (s, 1H), 6.60 (s, 1H), 3.88 (s, 1H), 2.50 (t, J=10.5 Hz, 1H), 2.24 (d, J=10.5 Hz, 1H), 2.20 (d, J=11.0 Hz, 1H), 2.15 (d, J=11.0 Hz, 1H), 2.06 (d, J=10.5 Hz, 1H), 1.75 (s, 3H), 0.90 (d, J=10.5 Hz, 6H)
MS (m/z): 377 (M+H)+.
EXAMPLE 77 4-Bromo-2-iodo-5-trifluoromethyl-phenylamine
Figure US07282507-20071016-C00161
3-Trifluoro-4-bromo-aniline (5 g, 20.8 mmoL) in MeOH (10 mL) and THF (10 mL) was treated with NIS (5.16 g, 22.9 mmoL) at room temperature. After 2 hours, the reaction was quenched with saturated Na2S2O3. The solvent was removed and the residue was partitioned between CH2Cl2 and water. The organic layer was washed with brine and dried over anhydrous Na2SO4, then concentrated to yield a crude white solid. The crude material was purified using column chromatography (silica gel, 3:1 hexanes:EtOAc as eluent) to yield the title compound as a white solid.
1H NMR (CDCl3, 400 MHz) δ 7.88 (s, 1H), 6.98 (s, 1H), 4.45˜4.18 (br, s, 2H).
EXAMPLE 78 2-(2-Ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile
Figure US07282507-20071016-C00162
4-Amino-5-iodo-2-trifluoromethyl-benzonitrile (250 mg, 0.84 mmoL), Pd(OAc)2 (0.021 mmoL, 5 mg), Ph3P (0.042 mmoL, 11 mg), LiCl (0.84 mmoL, 36 mg) and KOAc (4.2 mmoL, 412 mg) were mixed together and flushed with N2. DMF (10 mL) was added to the reaction and the mixture was heated to 100° C. for 6 hrs. The reaction was then cooled down and diluted with Et2O. The solution was passed through a pad of Celite to remove any undissolved solids. EtOAc and H2O were added. The aqueous layer was exacted 3× with Et2O. The combined organic layer was washed with brine, dried over anhydrous Na2SO4, filtered and concentrated to yield a crude brown oil. The crude material was then purified by column chromatography (silica gel, hexanes:EtOAc 3:1 as eluent) to yield the title compound as a yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.18 (s, br, 1H), 8.02 (s, 1H), 7.78 (s, 1H), 3.55 (s, 1H), 3.29 (d, J=10.8 Hz, 1H), 3.04 d, J=10.8 Hz, 1H), 2.45 (abq, J=9.6 Hz, 2H), 2.38 (s, 3H), 1.72 (s, 3H), 1.23 (t, J=12.0 Hz, 3H)
MS (m/z): 343 (M+H)+, 365 (M+Na)+.
EXAMPLE 79 2-(5-Bromo-3-methyl-6-trifluoromethyl-1H-indol-2-yl)-1-ethylsulfanyl-propan-2-ol
Figure US07282507-20071016-C00163
The compound prepared as in Example 77 (750 mg, 2.05 mmoL), Pd(OAc)2 (0.102 mmoL, 23 mg), Ph3P (0.204 mmoL, 54 mg), LiCl (2.05 mmoL, 87 mg) and KOAc (10.25 mmoL, 1.01 g) were mixed together and flushed with N2. DMF (10 mL) was added to the reaction and the mixture was heated to 100° C. for 6 hrs. The reaction was then cooled down and diluted with Et2O. The solution was passed through a pad of Celite to remove any undissolved solids. EtOAc and H2O were added. The aqueous layer was exacted 3× with Et2O. The combined organic layer was washed with brine, dried over anhydrous Na2SO4, filtered and concentrated to yield a crdue brown oil. The crude material was then purified by column chromatography (silica gel, hexanes:EtOAc 3:1 as eluent) to yield the title compound as a dark yellow solid.
1H NMR (CDCl3, 400 MHz) δ 8.85 (br, s, 1H), 7.78 (s, 1H), 7.69 (s, 1H), 3.52 (s, 1H), 3.25 (s, 1H), 3.02 (d, J=11.0 Hz, 1H), 2.50 (m, J=10.5, 2.0 Hz, 2H), 2.30 (s, 3H), 1.68 (s, 3H), 1.18 (t, J=12.5 Hz, 3H)
MS (m/z): 396, 398 (M+H)+.
EXAMPLE 80 1-Ethylsulfanyl-2-(3-methyl-5-nitro-6-trifluoromethyl-1H-indol-2-yl)-propan-2-ol
Figure US07282507-20071016-C00164
The compound prepared as in Example 6 (320 mg, 1.053 mmoL), Pd(OAc)2 (0.526 mmoL, 12 mg), Ph3P (1.06 mmoL, 28 mg), LiCl (1.053 mmoL, 45 mg) and KOAc (5.265 mmoL, 517 g) were mixed together and flushed with N2. DMF (10 mL) was added to the reaction and the mixture was heated to 100° C. for 6 hrs. The reaction was then cooled down and diluted with Et2O. The solution was passed through a pad of Celite to remove any undissolved solids. EtOAc and H2O were added. The aqueous layer was exacted 3× with Et2O. The combined organic layer was washed with brine, dried over anhydrous Na2SO4, filtered and concentrated to yield a crude brown oil. The crude material was then purified by column chromatography (silica gel, hexanes:EtOAc 3:1 as eluent) to yield the title compound as a yellow solid.
1H NMR (CDCl3, 400 MHz) δ 9.29 (s, br, 1H), 8.22 (s, 1H), 7.75 (s, 1H), 3.58 (br, s, 1H), 3.25 (d, J=10.8 Hz, 1H), 3.05 (d, J=10.8 Hz, 1H), 2.38 (m, J=8.5, 7.5 Hz, 2H), 2.32 (s, 3H), 1.68 (s, 3H), 1.16 (t, J=12.0 Hz, 3H)
MS (m/z): 363 (M+H)+.
EXAMPLE 81 4-Amino-5-iodo-2-trifluoromethyl-benzonitrile
Figure US07282507-20071016-C00165
4-Amino-2-trifluoromethyl-benzonitrile (20.44 g, 109.79 mmoles) and p-toluenesulfonic acid monohydrate (1.05 g, 5.52 mmoles) were dissolved methanol (200 mL) and THF (200 mL), and the reaction mixture was stirred under a nitrogen atmosphere. The reaction vessel was wrapped in aluminium foil, while the solution was stirred for 20 min., then N-iodosuccinimide (30.41 g, 135.17 mmoles) was added and the reaction was allowed to stir overnight (16 hrs). The reaction mixture was concentrated in vacuo, triturated with hexanes (3×400 mL) and concentrated to dryness. The crude solid was dissolved in diethyl ether (400 mL), washed with water (3×), the organic extracts were diluted with hexanes (400 mL) and a white solid precipitated. The solid was filtered and dried in a vacuum oven (35° C. @ 762 Torr) overnight to yield the title compound.
1H NMR (400 MHz, CDCl3) δ 8.04 (s, 1H), δ 7.00 (s, 1H), δ 4.83 (br s, 2H)
MS calculated for C8H4F3IN2: 312.03, found 311 (M−H).
EXAMPLE 82 N-(4-Cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide
Figure US07282507-20071016-C00166
4-Amino-5-iodo-2-trifluoromethyl-benzonitrile (8.04 g, 25.77 mmoles) was dissolved in anhydrous THF (60 mL), stirred under a nitrogen atmosphere and cooled in an ice/brine bath for 20 min. 1.0 M potassium tert-butoxide in THF (82 mL, 82 mmoles) was added and the reaction mixture was stirred for 20 min. Methanesulfonyl chloride (3.2 mL, 41.18 mmoles) was then added and the reaction mixture was stirred at ambient temperature overnight. The reaction mixture was quenched with 1N HCl (90 mL) and extracted with dichloromethane (3×100 mL). The organic extracts were diluted with diethyl ether and a white solid precipitated. The solid was filtered, washed and dried to yield the title compound. The filtrate was concentrated to a crude orange solid. The compound was purified by column chromatography (SiO2, 100% CH2Cl2).
1H NMR (400 MHz, CDCl3) δ 8.26 (s, 1H), δ 7.99 (s, 1H), δ 7.10 (s, 1H δ 3.17 (s, 3H)
MS calculated for C9H6F3IN2O2S: 390.12, found 389 (M−H).
EXAMPLE 83 1,1,1-Trifluoro-2-methyl-but-3-yn-2-ol
Figure US07282507-20071016-C00167
To a solution of ethynylmagnesium bromide (60 mL, 0.5 M in THF) cooled to 0° C. under nitrogen was added 1,1,1-trifluoroacetone (2.00 mL, 20.6 mmol). The solution was stirred at 0° C. for 1 hour and quenched by the cautious addition of HCl (30 mL, 1 M). After extraction with diethyl ether, the organic layer was concentrated at 35° C. on a rotary evaporator and the residue purified by flash chromatography (Silica gel, dichloromethane mobile phase) to yield the title compound as an oil, which was used in the subsequent step without further purification.
EXAMPLE 84 2-(2,2,2-Trifluoro-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile (Compound # 329)
Figure US07282507-20071016-C00168
N-(4-Cyano-2-iodo-5-trifluoromethyl-phenyl)-methanesulfonamide (1.82 g, 4.66 mmoles), dichlorobis(triphenylphosphine)palladium (160 mg, 0.23 mmoles) and copper iodide (90 mg, 0.47 mmoles) were suspended in anhydrous THF (20 mL), under a nitrogen atmosphere. Triethylamine (1.30 mL, 9.33 mmoles) was added and after 10 min. of stirring, 1,1,1-trifluoro-2-methyl-but-3-yn-2-ol was added. The reaction mixture was stirred overnight at ambient temperature. The reaction mixture was then concentrated to a residue, which was purified by column chromatography (SiO2, 100% CH2Cl2) to yield a semisolid.
The semisolid was dissolved in methanol (20 mL) under vigorously stirring. Then, 4.0 M sodium hydroxide solution (4.0 mL) was added. After 20 min, the reaction mixture was quenched with 1N HCl (16 mL) and extracted with diethyl ether (3×30 mL). The combined extracts were dried over MgSO4, filter and concentrated in vacuo to yield the title compound as a white solid.
MS calculated for C13H8F6N2O: 322.05, found 321 (M−H).
EXAMPLE 85 (+) and (−) Enantiomers of 2-(2,2,2-Trifluoro-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile (Compounds #334 and #335)
Figure US07282507-20071016-C00169
A portion of the title compound prepared as in Example 84 above, was separated into its constituent enantiomers by chiral HPLC (Chiralpak AD, isopropyl alcohol/heptane into the less polar dextrorotatory (+) compound, Compound #334 and the more polar levorotatory (−) compound Compound #335.
EXAMPLE 86 (+) and (−) Enantiomers of 2-(2-Ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile (Compounds #218 and #217)
Figure US07282507-20071016-C00170
Compound #217 and Compound #218 were prepared by separating 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 45, by chiral HPLC (Chiralpak AD, isopropyl alcohol to yield the corresponding less polar dextrorotatory (+) compound, Compound #218 and the more polar levorotatory (−) compound, Compound #217.
EXAMPLE 87 (−) Enantiomer of 2-(2-Ethanesulfonyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile (Compound #222)
Figure US07282507-20071016-C00171
The (−) enantiomer of 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 86 above (1 equivalent) was dissolved in ethyl acetate (5 mL/mmol). A separate aqueous solution of OXONE® (3 equivalents) and Bu4NHSO4 (0.3 mol %) (10 mL water/g of OXONE®) was prepared and the pH of this solution adjusted to about 7 by the addition of saturated sodium bicarbonate solution. After the pH adjustment, this aqueous solution was added to the ethyl acetate solution and the resulting biphasic mixture vigourously stirred. After 8 hours, an additional 3 equivalents of the pH-adjusted OXONE® solution was added and the mixture stirred overnight. Ethyl acetate (10 mL/mmol of sulfide) was added and the aqueous phase was removed. The organic phase was washed with brine, dried over anhydrous Na2SO4, concentrated to yield a yellow solid. This crude material (yellow solid) was purified using column chromatography (silica gel, ethyl acetate as eluent) to yield the title compound as a pale yellow solid.
X-Ray crystallographic analysis of this material indicated that the absolute configuration of the stereocenter is (R).
EXAMPLE 88 (+) and (−) Enantiomers of 2-(2-Ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile (Compound #234 and #233)
Figure US07282507-20071016-C00172
Compound #234 and Compound #233 were prepared by separating 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 78, by chiral HPLC (Chiralpak AD, 30% heptane in isopropyl alcohol into the less polar dextrorotatory (+) compound, Compound #234 and the more polar levorotatory (−) compound, Compound #223.
EXAMPLE 89 (−) Enantiomer of 2-(2-Ethanesulfonyl-1-hydroxy-1-methyl-ethyl)-3-methyl -6-trifluoromethyl-1H-indole-5-carbonitrile (Compound #251)
Figure US07282507-20071016-C00173
The (−) enantiomer of 2-(2-ethylsulfanyl-1-hydroxy-1-methyl-ethyl)-3-methyl-6-trifluoromethyl-1H-indole-5-carbonitrile, the compound prepared as in Example 88 above (1 equivalent) was dissolved in ethyl acetate (5 mL/mmol). A separate aqueous solution of OXONE® (3 equivalents) and Bu4NHSO4 (0.3 mol %) (10 mL water/g of OXONE®) was prepared and the pH of this solution adjusted to about 7 by the addition of saturated sodium bicarbonate solution. After the pH adjustment, this aqueous solution was added to the ethyl acetate solution and the resulting biphasic mixture vigourously stirred. After 8 hours, an additional 3 equivalents of the pH-adjusted OXONE® solution was added and the mixture stirred overnight. Ethyl acetate (10 mL/mmol of sulfide) was added and the aqueous phase was removed. The organic phase was washed with brine, dried over anhydrous Na2SO4, concentrated to yield a yellow solid. This crude material (yellow solid) was purified using column chromatography (silica gel, ethyl acetate as eluent) to yield the title compound as a white solid.
EXAMPLE 90 2-(1,2-Dihydroxy-1-methyl-ethyl)-6-trifluoromethyl-1H-indole-5-carbonitrile
Figure US07282507-20071016-C00174
To a suspension of 2-[2-(tert-butyl-dimethyl-silanyloxy)-1-hydroxy-1-methyl-ethyl]-1-methanesulfonyl-6-trifluoromethyl-1H-indole-5-carbonitrile (9.22 g, 0.01935 mole) in methanol (150 mL), a solution of NaOH (4.64 g 0.1161 mole) in water (25 mL) was added. The resulting mixture was heated in an oil-bath at 50° C. for 4 hr and tthen stirred at room temperature overnight. To the reaction mixture was then added 1 N HCl until the pH was 3. The aqueous mixture was extracted with EtOAc, the organic layer was washed with water, brine, then dried over MgSO4. The solvent was stripped off, the residue was triturated with DCM, and the resulting solid collected by filtration to yield the title compound as a light grey solid.
MS m/z (M−H) 283
1H NMR (300 Hz, DMSO d6). δ1.50 (s. 3H), 2.50 (d, J=1.8 Hz 2H), 4.96 (t, J=5.8 Hz, 1H), 5.50 (s, 1H), 6.55 (s, 1H), 7.87 (s, 1H), 8.29 (s, 1H).
EXAMPLE 91 2-[2-(4-Cyano-phenoxy)-1-hydroxy-1-methyl-ethyl]-6-trifluoromethyl-1H -indole-5-carbonitrile (Compound #426)
Figure US07282507-20071016-C00175
To a solution of 2-(1,2-dihydroxy-1-methyl-ethyl)-6-trifluoromethyl-1-H -indole-5-carbonitrile (209.6 mg, 0.7374 mmol) in dry DMF (4 ml) was added NaH (60 mg, 1.4749 mmol, 60% in mineral oil). After the reaction mixture was stirred at room temperature for 30 min., 4-fluorobenzonitrile (98.15 mg, 0.8115 mmol) was added, and the reaction mixture stirred at room temperature. After HPLC indicated the consumption of starting material, the reaction mixture was poured onto water and extracted with ethyl acetate. The organic layer was washed with 10% LiCl, brine and dried over MgSO4. Column chromatography (EtOAc/Hexanes 50%-100%) yielded the title product as a light yellow powder.
MS: no molecular ion.
1H NMR (400 Hz, MeOD). δ1.77 (s. 3H), 4.85 (s, 2H), 6.66 (s, 1H), 7.09 (d, J=9 Hz, 2H), 7.62 (d, J=9 Hz, 2H), 7.87 (s, 1H), 8.13 (s, 1H).
2-[1-Hydroxy-1-methyl-2-(3-nitro-phenoxy)-ethyl]-6-trifluoromethyl-1H -indole-5-carbonitrile, Compound #428
Figure US07282507-20071016-C00176
was similarly prepared according to the procedure described in Example 91, to yield the product as a brown-yellow solid.
MS: no molecular ion
1H NMR (400 Hz, DMSO d6). δ1.69 (s. 3H), 4.26 (d, J=9.7 Hz, 2H), 4.33 (d, J=9.6 Hz, 2H), 6.06 (s, 1H), 6.65 (s, 1H), 7.11 (m, 1H), 7.37-7.39 (m, 1H), 7.62 (t, J=1 Hz, 1H), 7.83-7.86 (m, 1H), 7.88 (s, 1H), 8.33 (s, 1H), 12.08 (s, 1H).
2-[2-(4-Cyano-3-trifluoromethyl-phenoxy)-1-hydroxy-1-methyl-ethyl]-6-trifluoromethyl-1H-indole-5-carbonitrile, Compound #429,
Figure US07282507-20071016-C00177
was similarly prepared according to the procedure described in Example 91, to yield the product as an off-white solid.
MS m/z (M−H) 452
1H NMR (300 Hz, DMSO d6). δ1.68 (s. 3H), 4.36 (s, 2H), 6.10 (s, 1H), 6.67 (s, 1H), 7.44 (m, 1H), 7.49 (d, J=2.4 Hz, 1H), 7.87 (s, 1H), 8.05 (d, J=8.5 Hz, 1H), 8.32 (s, 1H).
EXAMPLE 92 In Vitro Assay—Androgen Receptor Filtration Binding Assay (PANVERA)
The assay was run on a 96 well plate with each well filled with a total reaction volume 150 μL, of a solution containing 5 pmol androgen receptor LBD (Panvera) or 30 μL of freshly prepared rat cytosol, 0.5 nM [3H] R1881 tracer (NEN), 1.5 μL (10 μM) test compound or vehicle (diluted in 30% DMSO, final concentration of DMSO 0.75%) and 150 μL of TED buffer. (TED buffer contains 10 mM Tris.HCl pH 7.4, 1 mM sodium molybdate, 1.5 mM EDTA, 1 mM DTT and 10% (v/v) glycerol.)
On day one, the solution containing receptor, tracer and TED buffer was distributed into a 96 well plate. Diluted test compound or control vehicle was then added to individual wells and the plate incubated at 4° C. overnight.
On day two, to each well was then added 20 μL human γ-globulin (ICN 823102), prepared at 25 mg/ml in TE pH 8.0, and 55 μL 40% polyethylene glycol 8000 (J T Baker U222-08), prepared in TE pH 8.0. The plate was incubated at 4° C. for 60 minutes. During incubation, the harvester was rinsed with 10% PEG 8000, prepared in TE pH 8.0, and a GF/C Unifilter-96 was pre-wet with 10% PEG. The binding reaction was filtered, the retentate was washed three times with 10% PEG and dried under vacuum for a couple of minutes, then dried at 50° C. for 5 min and the plate was bottom sealed. Next, 25 μL of Microscint-20 (Packard) was added to the filter wells and the plate was top sealed. The plate wells were then counted on a TopCount (Packard).
IC50s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 μM) in the binding assay. Counts per well were measured and IC50s determined by linear regression.
Representative compounds of the present invention were tested for binding to the androgen receptor according to the procedure described above with results as listed in Table A. For compounds tested more than once, each result is listed separately in the Table below.
TABLE A
Androgen Receptor Binding (Panvera)
ID No. IC50 (nM)
1 14000
2 53000
3 26000
4 7600
5 39000
8 2650
12 39000
19 >100000
20 23500
21 >10200
22 >7700
22 >9600
23 54000
25 8800
52 150
53 1967
54 465
54 220
55 715
55 635
56 485
56 610
57 141
57 480
58 455
59 4100
60 6750
61 440
62 325
63 1550
64 815
65 945
66 2600
67 3000
68 19000
69 1200
70 750
75 9100
76 1244
77 1107
78 3556
79 >9500
80 6400
81 15000
82 185
82 200
83 160
83 545
84 180
85 460
86 1250
87 350
87 1650
88 5150
89 >9600
90 >9000
91 1285
92 37000
93 23000
94 15000
95 3000
96 1710
96 820
97 7400
98 8500
99 5750
100 1155
101 3850
102 665
103 1650
104 930
105 105
106 225
107 9400
108 7000
109 2600
110 7700
112 4100
113 5100
114 4900
115 7700
116 1750
117 2000
253 335
254 1025
254 920
255 1255
255 3050
256 2650
257 5150
258 2450
259 915
260 2050
261 1457
262 >10000
EXAMPLE 93 Androgen Receptor Binding Using Rat Ventral Prostate Cytosol
Rat Prostate Cytosol Preparation:
Male Sprague Dawley or Wistar rats (Charles River, 200-300 g) were used for each preparation. The day before preparing the cytosol, the rats were castrated using standard surgical procedures.
The rats were euthanized by carbon dioxide asphyxiation. The rat prostates were quickly removed and placed on ice in pre-chilled, pre-weighed 50 mL plastic tubes. No more than five prostates were placed into one tube. The tubes were then weighed and the prostate tissue wet weights calculated.
To the chilled prostate tissue was then added 1 mL/mg tissue of chilled homogenization buffer. The homogenization buffer was freshly prepared by mixing 10 mM Tris.HCl, pH 7.4, 1 mM sodium molybdate, 1.5 mM EDTA, 1 mM dithiothreitol, 10% (v/v) glycerol and 1% protease inhibitor cocktail (Sigma P 8340).
The prostate tissue was homogenized in a cold room using a pre-chilled Polytron PT3000 homogenizer (Brinkmann). Homogenization was performed at a speed setting of 20, three times for 10 sec bursts. The tubes containing the prostate tissue was kept on ice while homogenizing. The homogenate was allowed to rest on ice for 20 sec between bursts.
The homogenate was then placed into pre-chilled 3 mL polycarbonate ultracentrifuge tubes and centrifuged in the TLA-100 rotor of a TL-100 ultracentrifuge for 12 min at 100,000 rpm at 4° C. The resulting supernatant was stored in 1 mL aliquots at −80° C. until needed.
Binding to the androgen receptor was determined according to the protocol described in Example 86 using the above prepared rat cytosol.
% Inhibition was determined by testing dilutions of the test compound (usually duplicates of 10 μM) in the binding assay. Counts per well were measured and percents of inhibition determined. Androgen receptor binding IC50s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 μM) in the binding assay. Counts per well were measured and IC50s determined by linear regression.
Representative compounds of the present invention were tested for binding to the androgen receptor according to the procedure described above with results as listed in Table B. For compounds tested more than once, each result is listed separately in the Table below.
TABLE B
Androgen Receptor Binding (Rat Cytosol)
ID No. % Inhibition Concentration IC50 (nM)
1 22 1000 nM
2 2.5 1000 nM
3 6.6 1000 nM
4 10.75 1000 nM
5 5.5 1000 nM
8 −2 1000 nM
12 47.5 1000 nM
18 38 3000 nM
17 88 3000 nM
19 −55 1000 nM
20 −28.5 1000 nM
21 −41.5 1000 nM
22 5.325 1000 nM
22 −12.2 1000 nM >7700
23 −1.5 1000 nM 6000
24 2 1000 nM
25 −83.5 1000 nM
26 21 1000 nM
27 14 1000 nM 3100
28 −3.4 1000 nM 7000
29 −1.8 1000 nM 4700
30 −7.7 1000 nM 4100
31 20 1000 nM 4050
32 34 1000 nM 43000
33 11 1000 nM 29000
34 18 1000 nM 5700
35 −19 1000 nM 4200
36 −34 1000 nM >100000
37 25 1000 nM 3600
38 16 1000 nM 8800
39 6 1000 nM >6100
40 −2.5 1000 nM 3800
41 20 1000 nM 2300
42 23 1000 nM 7100
43 5.8 1000 nM 9100
47 81 3000 nM
49 48 3000 nM
52 94.5 1000 nM 79
53 9.75 1000 nM
54 5.5 1000 nM
55 180
55 5.5 1000 nM
56 38.5 1000 nM
57 100
57 78.5 1000 nM
58 79.5 1000 nM
59 67.5 1000 nM 220
60 44.5 1000 nM >10000
61 73 1000 nM
62 69 1000 nM
63 47.5 1000 nM
64 61.5 1000 nM
65 47.5 1000 nM
66 −12 1000 nM
67 25.5 1000 nM
68 36 1000 nM
69 31 1000 nM
70 33.65 1000 nM
75 13.15 1000 nM
76 −30.5 1000 nM
77 −9.25 1000 nM
78 16.56 1000 nM
79 48.5 1000 nM
80 −24.95 1000 nM
81 5.2 1000 nM
82 69.75 1000 nM 640
82 83 1000 nM
83 69 1000 nM
83 120
84 86 1000 nM 240
85 78.5 1000 nM 110
85 89 1000 nM
86 72.5 1000 nM 240
87 85 1000 nM
87 61.5 1000 nM 120
88 −17.45 1000 nM
90 −2.5 1000 nM
91 36 1000 nM
92 14.68 1000 nM
93 35 1000 nM
94 21.8 1000 nM
95 56.5 1000 nM
96 74 1000 nM
96 59 1000 nM
97 25 1000 nM
98 −31 1000 nM
99 8.5 1000 nM
100 80 1000 nM
101 −24.94 1000 nM
102 73.5 1000 nM 140
104 94.5 1000 nM
104 110 3000 nM
105 61.5 1000 nM 98
106 63 1000 nM 300
107 1.5 1000 nM
108 17.5 1000 nM
109 49 1000 nM
110 58.5 1000 nM
112 39.5 1000 nM
113 −17.5 1000 nM
113 75.5 1000 nM
114 61 1000 nM
115 54.5 1000 nM 1300
116 28.4 1000 nM
117 32.5 1000 nM
118 80.5 3000 nM
120 130 3000 nM
121 86 3000 nM
122 83.5 3000 nM
123 77 3000 nM
123 15 3000 nM
124 66.5 3000 nM
124 4.4 3000 nM
125 21 3000 nM
126 −30 3000 nM
127 −35 3000 nM
127 36 3000 nM
128 25 3000 nM
129 39.5 3000 nM
130 32.55 3000 nM
131 120 3000 nM
132 64.5 3000 nM
133 54 3000 nM
135 130 3000 nM
136 38 3000 nM
137 57.5 3000 nM
138 110 3000 nM
139 87.5 3000 nM
139 31.5 3000 nM
140 47 3000 nM
141 −4.5 3000 nM
142 92 3000 nM
143 14 3000 nM
144 79 3000 nM
145 58 3000 nM
147 68 3000 nM
148 94 3000 nM
149 94 3000 nM
149 77 3000 nM
150 120 3000 nM
151 100 3000 nM
152 97 3000 nM
154 29 3000 nM
155 −6.1 3000 nM
156 66 3000 nM
156 67 3000 nM
158 52 3000 nM
159 93 3000 nM
160 65 3000 nM
161 39 3000 nM
162 0.69 3000 nM
164 52 3000 nM
165 52 3000 nM
168 41 3000 nM
169 62 3000 nM
170 80 3000 nM
171 18 3000 nM
171 320
173 32 3000 nM
176 90 3000 nM
253 33.5 1000 nM
254 670
254 41 1000 nM
255 26 1000 nM
258 35.4 1000 nM
261 14.05 1000 nM
262 −8.4 1000 nM
265 93.5 3000 nM
266 12.4 3000 nM
267 79 3000 nM
267 28 3000 nM
268 −3.3 3000 nM
EXAMPLE 94 COS-7 Whole-Cell Androgen Receptor Binding Assay, Adenovirus Transduction
Day One:
COS-7 cells were plated in 96-well plates at 20,000 cells per well, in a solution of DMEM/F12 (GIBCO) containing 10% (v/v) charcoal-treated fetal bovine serum (Hyclone) and lacking phenol red. The cells were then incubated overnight at 37° C. in 5% (v/v) humidified CO2.
Day Two:
Test compound solutions were prepared by diluting the test compound in 100% (v/v) DMSO, if necessary. Each dilution yielded a solution which was 625× the final desired test concentration.
Next, 1 mL of DMEM/F12 lacking phenol red was pipetted into each of the wells of a 2-mL 96-well assay block. Then 4 μL of the 625× test compound dilutions were pipetted into each well of the assay block. The wells were carefully mixed by pipette.
In a 15 mL or 50 mL sterile centrifuge tube, a 2.5 nM dilution of tritiated methyl-trienolone in DMEM/F12 lacking phenol red ([3H]R1881; Perkin-Elmer) was prepared.
In a 15 mL or 50 mL sterile centrifuge tube, a dilution in DMEM/F12 of the adenovirus AdEasy+rAR at a moi of 1:50 per well was prepared.
The medium was removed from the 96-well plates by inversion and the plates dried very briefly, inverted, on a sterile towel. As soon as possible after medium removal, 40 μL of the diluted test compound was added to each well, in duplicate. To each well was then added 40 μL of the 2.5 nM [3H]R1881 and 20 μL of the diluted adenovirus. The plates were then incubated for 48 hours at 37° C. in 5% (v/v) humidified CO2.
Day Four:
The medium was removed from the above incubated plates by inversion and dried. Each well was then washed with 0.35 mL of 1× PBS. The PBS was then removed from the plates by inversion and the plates dried.
To each well was then added 50 μL of 0.5% (v/v) Triton X-100 (Sigma) in 1× PBS and the plates placed on a rotary shaker for 5 min. The contents of each well were then transferred to an OptiPlate-96 (Packard) scintillation plate. To each well was then added 0.2 mL of Microscint-20 (Packard) and the wells counted on a TopCount (Packard).
Percent inhibition was determined by testing dilutions of the test compound (usually duplicates of 10 μM) in the binding assay. Counts per well were measured and percents of inhibition determined. Androgen receptor binding IC50s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 μM) in the binding assay. Counts per well were measured and IC50s determined by linear regression.
Representative compounds of the present invention were tested for binding to the androgen receptor according to the procedure described above with results as listed in Table C. Unless otherwise noted, COS binding % inhibition was determined using a concentration of 3000 nM. For compounds tested more than once, each result is listed separately in the Table below.
TABLE C
COS Binding
ID No. % Inhibition IC50 (nM)
10 >3000
11 >3000
17 >1500
47 78 >1000
49 30 >3000
50 7
51 54
104 94 1000
118 >1500
118 62 >1300
120 86 205
121 72 >1800
122 66 >1600
123 82 >1800
123 32 >3000
124 54 >880
124 11 >3000
125 30
126 29
127 41
127 74 >1200
128 21 >1500
129 10
130 −8
131 84 >1600
132 8.7 >3000
133 65 >1500
134 >10000
135 98 320
136 4.8 526.7
137 73 >1500
138 78 317
139 94 63
139 97 252.5
140 51.5 >1500
141 42
141 >3000
142 90 220
143 68 >1500
144 375
145 84.7 36.7
147 6.1 >3000
148 32 >2400
149 63 780
149 78 >790
150 81 165
150 74 626.5
151 >970
151 55 2185.5
152 39 108
154 50
155 35
156 42 >1000
156 52 >1000
158 62 160
158 56 550
159 90 240
160 84 250
161 20
162 56
164 68 >1000
165 69 >3000
166 3000
167 >3000
168 60 >3000
169 90 48
170 67 >3000
171 92 145
171 94
173 17 >3000
175 >3000
176 75 1500
177 90 88
180 24
185 92 61
189 100 280
190 100 292
191 65 840
192 86 82
194 80 320
196 53
197 86 >3000
198 55
199 82 310
200 97 1000
201 86 340
202 50
206 −40
207 −35
207 39
208 −26
208 −22
209 61 1843.3
211 43
212 86 98
213 71 >600
214 >3000
217 792.4
217 38 >3000
217 61 493.1
217 69 149.1
219 6.2
220 34
222 42 1584
225 82 141.6
230 49
231 73 665
231 78 >3000
233 95 45.6
233 81
234 71 539.4
235 78 519.7
236 83 105
240 48
241 48
242 92 305.1
244 32
245 47
246 70 616.2
247 90 60.7
248 24
250 79
251 85 220
252 68 >3000
265 86 585
266 38
267 75 264
267 79 89.6
268 42
EXAMPLE 95 L929 Androgen Receptor Functional Assay, Adenovirus Transduction
Day One:
L929 cells were plated in 96-well plates at 20,000 cells per well, in DMEM/F12 (GIBCO) containing 10% (v/v) charcoal-treated fetal bovine serum (Hyclone) and lacking phenol red. The plates were then incubated overnight at 37° C. in 5% (v/v) humidified CO2.
Day Two:
Test compound dilutions were prepared in 100% (v/v) DMSO, if necessary. Each dilution was made to 1250× the final desired assay concentration.
First, 2 mL of DMEM/F12 lacking phenol red was pipetted into the wells of a 2-mL 96-well assay block. Next, 4 μL of the 1250× test compound dilutions were pipetted into each well of the assay block. The mixtures within the well were then carefully mixed by pipette.
In a 15 mL or 50 mL sterile centrifuge tube, a 2.5 nM (2.5×) dilution of R1881 (methyl-trienolone) in DMEM/F12 lacking phenol red was prepared.
In a second 15 mL or 50 mL centrifuge tube a solution containing an equal volume of DMEM to the first and an equal volume of 100% (v/v) DMSO to the volume of R1881 used in the first tube was prepared.
In a 15 mL or 50 mL sterile centrifuge tube, a dilution in DMEM/F12 of the adenovirus AdEasy+rAR at an moi of 1:500 per well was prepared.
The medium was removed from the 96-well plates by inversion and dried, inverted, very briefly. As soon as possible after medium removal, 40 μL of the diluted unlabeled test compound was added to each well, in duplicate. To each well designated for antagonist testing was added 40 μL of the 2.5 nM R1881 dilution to the wells for antagonist testing. To each well designated for agonist testing was added 40 μL of the DMSO dilution. Then 20 μL of the diluted adenovirus were added to all wells. The plates were incubated for 48 hours at 37° C. in 5% (v/v) humidified CO2.
Day Four:
To each well was added 100 μL of Steady-Glo luciferase assay substrate (Promega) and the plates were placed on a rotary shaker for 1 min. The plates were then incubated at room temperature in the dark for one hour. The contents of each well were then transferred to a white microtiter plate (Packard) and read on a Luminoskan Ascent (Thermo Lab Systems).
L929 AR percent activity was determined by testing dilutions of the test compound using a concentration of 3000 nM unless otherwise noted. L929 percent inhibition was determined by testing dilutions of the test compound using a concentration of 3000 nM. EC50s and IC50s were determined by testing serial dilutions of the test compound (usually duplicate ten half-log dilutions starting at 10 μM). Luciferase activity per well were measured and EC50s and IC50s determined by linear regression.
Representative compounds of the present invention were tested for functional activity at the androgen receptor according to the procedure described above with results as listed in Table D. For compounds tested more than once, each result is listed separately in the Table below.
TABLE D
L929 ANDROGEN RECEPTOR FUNCTIONAL ASSAY
ID No. % Activity % Inhibition EC50 (nM) IC50 (nM)
47 2 75
49 2 8
50 2 36
51 2 −39
104 9 18
118 −2 @ 8000 nM 63 >8000 3067.5
120 −5 44
121 −4 54
122 10 35
123 −4 1
123   1 @ 8000 nM 30
124 −4 20
124 −4 99
125 −5 28
126 −5 25
127 −5 66
127 −5 32
128 −4 44
129 −5 −8
130 −5 46
131 −5 −4
132 −5 48
133 −4 19
135 0 40
136 0 75
137 0 77
138 0 19
139 0 43
139 1 91
140 0 78
141 0 42
142 0 78
143 0 67
144 0 82
145 1 94
147 0 43
148 0 77
149 2 77
150   0 @ 8000 nM >8000 303.4
151 −1 @ 8000 nM >8000 533.4
154 2 7
155 2 −2
156 2 35
156 2 23
158 3 21
158 2 29
159 2 82
160 1 76
161 2 24
162 2 64
164 2 71
165 1 100
168 3 26
169 2 98
170 2 67
171 −1 @ 8000 nM 101 >8000 366
171 11 70
173 2 40
176 3 81
177 2 89
180 2 −11
185 2 97
189 3 85
190 1 97
191 2 −6
192 8 89
194 2 40
196 13 −119
197 2 −26
198 7 24
199 2 59
200 1 96
201 2 83
202 1 21
206 5 88
207 1 101
207 −1 101 >8000 492.2
208 1 24
209 −3 @ 8000 nM 87 >8000 372.4
211 −1 88
212 −3 101
213 −1 @ 8000 nM 92 >8000 371.8
217   0 @ 8000 nM 87 >8000 969.4
217 414.7
217 5 80 810
218 0 62
219 −3 103
220 −3 103
221 −1 23
222   0 @ 8000 nM 61 >8000 2406.7
223   0 @ 8000 nM 100 >8000 277.4
225 1 97 228.9
230 0 45
231 0 75 3184.4
231 −1 37
233 0 97 69.2
234 −1 99 214.6
235 3 95 1842.7
236 2 103 821.3
240 0 47
251 −1 90 200
252 1 65 3100
265 −1 65
266 −4 65
267 −5 −13
267 0 19
268 9 83
EXAMPLE 96 Ventral Prostate and Seminal Vesicle Weight in vivo Assay
Immature (approximately 50 g) castrated male Sprague Dawley rats (Charles River) were treated once daily for five days with test compound (usually given orally at 40 mg/kg in a volume of 0.3 mL, in 30% cyclodextrin or 0.5% methylcellulose vehicle) and with testosterone propionate (given subcutaneously by injection at the nape of the neck at 2 mg/kg, in a volume of 0.1 mL in sesame oil). On the sixth day, the rats were euthanized by asphyxiation in carbon dioxide. Ventral prosatates and seminal vesicles were removed and their wet weights determined. Test compound activity was determined as the percent inhibition of testosterone-enhanced tissue weights, with a vehicle-treated control group set to zero percent and a testosterone alone-treated control group set to 100%.
A test compound was said to be “active” if the non weight adjusted prostate weight was ≦40 mg or the % Inhibition prostate weight, body weight adjusted was ≧40% @ 2 mg/day dosage. ID50's, if determined, of ≦15 mg/day also indicated an “active” compound.
Compounds #136, 139, 140, 142, 143, 159, 165, 167, 169, 170, 171, 171, 175, 176, 177, 181, 185, 190, 191, 192, 202, 205, 206, 207, 208, 209, 212, 213, 217, 222, 223, 224, 225, 230, 231, 232, 233, 236, 237, 243, 244, 250, 251, 252, 275, 276, 277, 278, 284, 288, 289, 291, 319, 327, 329, 330, 331, 332, 333, 334, 335, 344, 345, 347, 349, 354, 357 and 404 were tested according to the procedure described above and determined to be “active”.
Compounds #6, 7, 9, 10, 11, 13, 14, 15, 17, 18, 47, 49, 50, 51, 85, 104, 113, 118, 123, 124, 126, 127, 129, 131, 133, 134, 135, 137, 138, 141, 146, 152, 153, 155, 156, 158, 160, 161, 162, 164, 166, 168, 173, 180, 189, 194, 196, 197, 198, 199, 200, 201, 204, 218, 219, 220, 221, 228, 234, 235, 240, 241, 242, 245, 247, 266, 267, 268, 269, 270, 273, 274, 279, 280, 281, 282, 285, 285, 287, 290, 294, 295, 317, 318, 322, 323, 324, 325, 326, 353, 397, 403, 405, 407, 408, 410, 411, 412, 413, 414, 415, 426, 428, 429, 445 and 446 were tested according to the procedure described above and determined to be “inactive”. Note that while certain of these compounds may or may not have shown an effect on prostate and/or vesical weight, they are listed herein as “inactive” as they did not meet the specified criteria defined above.
EXAMPLE 97
As a specific embodiment of an oral composition, 50 mg of Compound #222 prepared as described above is formulated with sufficient finely divided lactose to provide a total amount of 580 to 590 mg to fill a size O hard gel capsule.
While the foregoing specification teaches the principles of the present invention, with examples provided for the purpose of illustration, it will be understood that the practice of the invention encompasses all of the usual variations, adaptations and/or modifications as come within the scope of the following claims and their equivalents.

Claims (5)

1. A compound of formula (II)
Figure US07282507-20071016-C00178
wherein:
X is NR1;
R1 is selected from the group consisting of hydrogen and —SO2-(lower alkyl);
R4 is hydrogen;
a is 2;
R5 is selected from the group consisting of halogen, cyano, nitro and trifluoromethyl;
b is 0;
c is 0;
R7 is hydrogen;
Figure US07282507-20071016-C00179
is a six membered saturated ring structure containing one to two heteroatoms selected from O, N or S; wherein the five to six membered saturated ring structure is optionally substituted with a substituent selected from aralkyl (wherein the aralkyl is optionally substituted with one to two substituents independently selected from halogen, lower alkyl, lower alkoxy, trifluoromethyl or (lower alkyl)-sulfonyl)), aryl-carbonyl (wherein the aryl is optionally substituted with a halogen) and aralkyloxy-carbonyl;
or a pharmaceutically acceptable salt thereof.
2. A compound as in claim 1 wherein:
X is NR1;
R1 is selected from the group consisting of hydrogen and methyl-sulfonyl;
R4 is hydrogen;
a is 2;
R5 is selected from the group consisting of chloro, cyano, nitro and trifluoromethyl;
b is 0;
c is 0;
R7 is hydrogen;
Figure US07282507-20071016-C00180
is selected from the group consisting of tetrahydro-thien-3-yl, tetrahydro-thiopyran-4-yl, 4-piperidinyl, 4-(1-benzyloxy-carbonyl-piperidinyl), 4-(1-(4-chlorophenyl)-carbonyl-piperidinyl), 4-(1-benzyl-piperidinyl), 4-(1-(4-trifluoromethyl -benzyl)-piperidinyl), 4-(1-(4-methyl-benzyl)-piperidinyl), 4-(1-(4-t-butyl-benzyl) -piperiinyl), 4-(1-(4-fluoro-benzyl)-piperidinyl), 4-(1-(4-chloro-benzyl)-piperidinyl), 4-(1-(3,4-dichloro-benzyl)-piperidinyl), 4-(1-(3-methoxy-benzyl)-piperidinyl), 4-(1-(4-methoxy-benzyl)-piperidinyl) and 4-(1-(4-methylsulfonyl-benzyl)-piperidinyl);
or a pharmaceutically acceptable salt thereof.
3. A pharmaceutical composition comprising a pharmaceutically acceptable carrier and a compound of claim 1.
4. A pharmaceutical composition made by mixing a compound of claim 1 and a pharmaceutically acceptable carrier.
5. A process for making a pharmaceutical composition comprising mixing a compound of claim 1 and a pharmaceutically acceptable carrier.
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EP1753749B1 (en) 2014-07-30
TW200606146A (en) 2006-02-16
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CA2564952A1 (en) 2005-11-24
JP5070042B2 (en) 2012-11-07
US20050245485A1 (en) 2005-11-03
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AR048643A1 (en) 2006-05-10

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