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EP3347454A1 - Pooled nk cells from umbilical cord blood associated with antibodies and their uses for the treatment of disease - Google Patents

Pooled nk cells from umbilical cord blood associated with antibodies and their uses for the treatment of disease

Info

Publication number
EP3347454A1
EP3347454A1 EP16774876.3A EP16774876A EP3347454A1 EP 3347454 A1 EP3347454 A1 EP 3347454A1 EP 16774876 A EP16774876 A EP 16774876A EP 3347454 A1 EP3347454 A1 EP 3347454A1
Authority
EP
European Patent Office
Prior art keywords
cells
ucb
population
pooled
units
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
EP16774876.3A
Other languages
German (de)
French (fr)
Inventor
Patrick HENNO
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Emercell Sas
Original Assignee
Emercell Sas
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Emercell Sas filed Critical Emercell Sas
Priority claimed from PCT/EP2016/071470 external-priority patent/WO2017042393A1/en
Publication of EP3347454A1 publication Critical patent/EP3347454A1/en
Pending legal-status Critical Current

Links

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/46Cellular immunotherapy
    • A61K39/461Cellular immunotherapy characterised by the cell type used
    • A61K39/4613Natural-killer cells [NK or NK-T]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/46Cellular immunotherapy
    • A61K39/464Cellular immunotherapy characterised by the antigen targeted or presented
    • A61K39/4643Vertebrate antigens
    • A61K39/4644Cancer antigens
    • A61K39/464402Receptors, cell surface antigens or cell surface determinants
    • A61K39/464424CD20
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/2887Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against CD20
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/30Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells
    • C07K16/3069Reproductive system, e.g. ovaria, uterus, testes, prostate
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/06Animal cells or tissues; Human cells or tissues
    • C12N5/0602Vertebrate cells
    • C12N5/0634Cells from the blood or the immune system
    • C12N5/0646Natural killers cells [NK], NKT cells
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/20Immunoglobulins specific features characterized by taxonomic origin
    • C07K2317/24Immunoglobulins specific features characterized by taxonomic origin containing regions, domains or residues from different species, e.g. chimeric, humanized or veneered
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/70Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
    • C07K2317/73Inducing cell death, e.g. apoptosis, necrosis or inhibition of cell proliferation
    • C07K2317/732Antibody-dependent cellular cytotoxicity [ADCC]
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/90Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
    • C07K2317/92Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value

Definitions

  • the invention relates to the field of cell therapy, particularly NK cell mediated therapy associated with antibodies.
  • the present invention is directed to methods and compositions for increasing the efficiency of therapeutic natural killer cells (NK cells) and/or antibodies, wherein said methods or compositions comprise the use of pooled NK cells from umbilical cord blood units (UCBs), preferably alloreactive NK cells, in combination with a therapeutic antibody in order to enhance the efficiency of the treatment in human subjects, in particularly through an increase in antibody-dependent cell-mediated cytotoxicity (ADCC) mechanism.
  • the present invention relates to said composition as a pharmaceutical composition, preferably for its use for the treatment of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease.
  • the present invention is also directed to a method of treatment of a disease in a human subject in need thereof, comprising the administering to said subject said pooled NK cells from UCBs, preferably alloreactive, in combination with a therapeutic antibody which can be bound to said NK cells.
  • NK cell effector functions can be exploited for the treatment of some tumors through their ability to mediate ADCC.
  • NK cell recognition of an antibody-coated target cell particularly by recognizing the NK cell Fc receptor, CD 16 (FcyRIIIa), results in rapid NK cell activation and degranulation.
  • mAbs Monoclonal antibodies
  • Tumor-targeted mAbs that initiate NK cell ADCC have been used clinically.
  • CD20 such as Rituximab or Ublituximab
  • Her2/neu such as Trastuzumab or Pertuzumab
  • epidermal growth factor receptor EGFR
  • CD52 such as alemtuzumab
  • disaloganglioside GD2
  • NK Natural Killer
  • NK cell receptors and their ligands over the last two decades have shed light on the molecular mechanisms of NK cell activation by tumor cells.
  • MHC major histocompatibility complex
  • NK cells are responsible of the graft versus leukemia (GvL) effect with minimal
  • NK cell alloreactivity could have a large beneficial independently of NK cell source. Mismatched transplantation triggers alloreactivity mediated by NK cells, which is based upon "missing self recognition". Donor- versus- recipient NK cell alloreactions are generated between individuals who are mismatched for HLA-C allele groups, the HLA-Bw4 group and/or HLA-A3/11.
  • KIR ligand mismatching is a prerequisite for NK cell alloreactivity because in 20 donor-recipient pairs that were not KIR ligand mismatched in the graft-versus-host direction, no donor alloreactive NK clones were found.
  • HLA molecules self-identity molecules
  • NK cells Even if NK cells have a natural cytotoxic potential, their cytotoxic activity can be improved in vitro by different activation mechanisms, and most of these mechanisms are also able to amplify NK cells (with variable amplification factors) leading to more therapeutic cells, more efficient.
  • In vitro activation protocols include cytokines and growth factor use, such as IL-
  • IL-15 IL- 18, IL-21, SCF, Flt3-L
  • accessory cells such as peripheral blood mononuclear cells, tumoral cells or cell lines (see M. Villalba Gonzales et al., WO2009/141729).
  • accessory cells presenting a particular iKIR-HLA mismatch (4 major iKIR-HLA mismatch: HLA A3/A11 ; HLA Bw4; HLA CI ; HLA C2 and associated iKIR receptors).
  • Umbilical cord blood has been shown to be a good source of NK cells, with higher NK cells percentages and good in vivo expansion/activation (see M. Villalba Gonzales et al., WO2012/146702).
  • the depletion of cells bearing the antigen specifically recognized by the antibody can be mediated through the mechanism of ADCC, complement dependant lysis, and direct antitumor inhibition of tumor growth through signal given via the receptor targeted by the antibody.
  • rituximab alone or in combination with chemotherapy was shown to be effective in the treatment of certain Non-Hodgkin's Lymphoma (NHL) grades, a significant % of patients with low grade NHL can exhibit low clinical response using rituximab.
  • NDL Non-Hodgkin's Lymphoma
  • UCB unit can be used to provide the desired NK cells contained in one UCB unit . Nevertheless, and despite the possibility to amplify and activate the NK cells contained in one UCB unit with a good rate of amplification, it is will be desirable to provide these NK cells product, for clinical therapies, available, purity, with high expansion rates and activation state and exhibiting NK cells cytotoxic activity.
  • NK alloreactive natural killer
  • the Applicant succeeded in implementing a method allowing the enhance of the ADCC efficacy of a therapeutic antibody by combining said antibody with alloreactive human amplified and/or activated NK cells in which said amplified and/or activated NK cells have been obtained from a pooled UCB units.
  • the inventors demonstrate here that the efficiency of a therapeutic antibody can be greatly enhanced by the co- injection/administrating of selected, alloreactive amplifying/activating and pooling UCB NK cells from different donors and said therapeutic antibody.
  • the present invention relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a therapeutic antibody, which can be bound by a natural killer cells (NK cells), preferably by a Fc receptor, and a population of natural killer cells (NK cells), preferably alloreactive NK cells, wherein said cells population is obtained by a method comprising the steps of:
  • n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50;
  • said composition containing said therapeutic antibody and said NK cells population according to the present invention is a composition or a product as a combined preparation for simultaneous, separate or sequential use.
  • said therapeutic antibody of said composition according to the present invention is a monoclonal antibody or a fragment thereof capable to bind said NK cells Fc receptor, and wherein said monoclonal antibody, or fragment thereof, comprises at least the 6 complement determining regions (CDRs) of the heavy and the light chain of said antibody specific of the antigen of the subject cell which is desired to target.
  • CDRs complement determining regions
  • said NK cells Fc receptor of said composition according to the present invention is the FcyRIIIa receptor
  • said therapeutic antibody of said composition according to the present invention is an antibody whose mechanisms include NK cell- mediated ADCC, preferably selecting from the group consisting of an anti-CD20, an anti-Her2/neu, an anti-epidermal growth factor receptor (EGFR), and an anti- ganglioside GD2 antibody (anti-GD2).
  • NK cell- mediated ADCC preferably selecting from the group consisting of an anti-CD20, an anti-Her2/neu, an anti-epidermal growth factor receptor (EGFR), and an anti- ganglioside GD2 antibody (anti-GD2).
  • said therapeutic antibody of said composition according to the present invention is a human, humanized or chimeric antibody or a fragment thereof.
  • said therapeutic antibody of said composition according to the present invention is selected from the group of:
  • Cetuximab Futuximab, Imgatuzumab, Matuzumab, Necitumumab or Nimotuzumab;
  • therapeutic antibodies whose mechanisms include NK cell-mediated ADCC are well known by the skilled person and disclosed in the art, and is part of the present list of therapeutic antibodies and thus comprised in the present invention.
  • the therapeutic antibody is not coated at the surface of the NK cells before its administration.
  • the therapeutic antibody is binding at the surface of the NK cells via the binding between its Fc portion and the CD 16 receptor presents at the surface of the NK cells.
  • antibody or “antibodies” are used interchangeably in the broadest sense and include monoclonal antibodies (e.g., full length or intact monoclonal antibodies), polyclonal antibodies, multivalent antibodies or multispecific antibodies (e.g., bispecific antibodies so long as they exhibit the desired biological activity).
  • such molecule consists in a glycoprotein comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds.
  • Each heavy chain is comprised of a heavy chain variable region (or domain) (VH) and a heavy chain constant region.
  • the heavy chain constant region is comprised of three domains, CHI, CH2 and CH3.
  • Each light chain is comprised of a light chain variable region (VL) and a light chain constant region.
  • the light chain constant region is comprised of one domain, CL.
  • the VH and VL regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR).
  • CDR complementarity determining regions
  • Each VH and VL is composed of three CDRs and four FRs, arranged from amino- terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4.
  • the variable regions of the heavy and light chains contain a binding domain that interacts with an antigen.
  • the constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g. effector cells) and the first component (Clq) of the classical complement system.
  • the heavy chains of immunoglobulins can be divided into three functional regions: the Fd region, the hinge region, and the Fc region (crystallizable fragment).
  • the Fd region comprises the VH and CHI domains and, in combination with the light chain, forms Fab - the antigen-binding fragment.
  • the Fc fragment is responsible for the immunoglobulin effector functions, which includes, for example, complement fixation and binding to cognate Fc receptors of effector cells.
  • the hinge region found in IgG,
  • IgA, and IgD immunoglobulin classes acts as a flexible spacer that allows the Fab portion to move freely in space relative to the Fc region.
  • Monoclonal Antibody is used in accordance with its ordinary meaning to denote an antibody obtained from a population of substantially homogeneous antibodies, i.e. the individual antibodies comprising the population are identical except for possible naturally occurring mutations that may be present in minor amounts.
  • a monoclonal antibody consists in a homogenous antibody resulting from the proliferation of a single clone of cells (e.g., hybridoma cells, eukaryotic host cells transfected with DNA encoding the homogenous antibody, prokaryotic host cells transformed with DNA encoding the homogenous antibody, etc.), and which is generally characterized by heavy chains of a single class and subclass, and light chains of a single type.
  • Monoclonal antibodies are highly specific, being directed against a single antigen. Furthermore, in contrast to polyclonal antibodies preparations that typically include different antibodies directed against different determinants, or epitope, each monoclonal antibody is directed against a single determinant on the antigen.
  • said cells population of NK cells is obtained by a method further comprising the step of: (c) depleting the T cells contained in the pool obtained in step (b); or
  • said cells population of NK cells is obtained by a method comprising the step of depleting the T cells contained in each of the n UCB units before the step (b) of pooling.
  • said cells population of NK cells is obtained by a method wherein said n UCB units when pooled present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells.
  • said cells population of NK cells is obtained by a method wherein said major HLA class I group is selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL1.
  • said population of NK cells is obtained by a method comprising further a method of expanding said population of NK cells from cells contained in said n UCB units, and wherein, - optionally each UCB units has been preliminary and separately expanded for said NK cells before the step of pooling said at least n UCB units; and/or
  • said population of NK cells is an activated population of NK cells, obtained by a method further comprising a step of activating said population of NK cells.
  • said population of NK cells is an activated population of NK cells wherein:
  • each UCB units has been preliminary and separately expanded and activated for said NK cells before the step of pooling said at least n UCB units;
  • said population of NK cells is obtained by a method selected in the group of methods consisting of:
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • v) for each of the UCB units obtained in the preceding step separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days; and
  • nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells.
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • NK cells contained in one UCB unit separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • step ii) optionally red cell-/erythrocytes-depleting each UCB unit; iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • n UCB units or fraction thereof containing NK cells, with n > 2, 3 ⁇ n ⁇ 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • each UCB unit ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, or by a step of freezing and thawing;
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells;
  • said population of activated NK cells is obtained by a method wherein, said suitable medium suitable to expand and to activate the NK cells comprised accessory cells and/or at least one suitable NK activated factor.
  • the present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease.
  • the present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a cancer wherein this cancer is selected from lymphoma B-CLL and NHL.
  • the present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a disease in a human subject in need thereof, wherein said therapeutic antibody and said alloreactive NK cells are administered into said subject simultaneously.
  • the present invention also relates to a method of treatment of a disease in a human subject in need thereof, comprising:
  • the present invention is directed to method of increasing ADCC in a subject receiving therapeutic antibody treatment, wherein said antibody can be bound by CD16 and said method comprises administering to said subject prior to, simultaneously or after the administration of said therapeutic antibody an amount of alloreactive NK cells sufficient to increase ADCC, and wherein said alloreactive NK cells are obtained ), wherein said NK cells population is obtained by a method comprising the steps of:
  • n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50;
  • the pooled UCBs NK cells population is obtained by the preferred following methods or preferred embodiment as described below.
  • a method comprising the steps of:
  • n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 ⁇ n ⁇ 50;
  • 3 ⁇ n ⁇ 5 and 3 ⁇ n ⁇ 25 being the most preferred.
  • fraction of UCB unit containing said cells it is intended to designate a fraction of the UCB unit containing at least the population of cells or part of said population which is desired to be produced.
  • said method further comprising the step of:
  • step (c) depleting the T cells contained in the pool obtained in step (b).
  • said method comprises a step of depleting the T cells contained in each of the n UCB units before the step (b) of pooling.
  • the n UCB units which are pooled in step b) present the same pattern for major HLA class I groups genotype.
  • each UCB present in the pooled n UCB belongs to a HLA group which is recognized by the same inhibitory KIR.
  • KIR or “inhibitory KIR” has its general meaning in the art and includes but is not limited to KIR2DL1, KIR2DL2, KIR2DL3, KIR3DL1 and KIR3DL2.
  • the main/major inhibitory KIRs are KIR2DL1, KIR2DL2, KIR2DL3, KIR3DL1 and KIR3DL2.
  • KIR2DL1 recognizes HLA-C w4 and related, 'group2' alleles.
  • KIR2DL2 and KIR2DL3 recognize HLA-Cw3 and related, 'group 1 ' alleles.
  • KIR3DL1 is the receptor for HLA-B allotypes with Bw4 motifs.
  • KIR3DL2 is the receptor for HLA- A3/11.
  • said major HLA class I group is selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL1.
  • a preferred source of UCB units are human UCB units.
  • said source is a source of frozen human
  • the method for producing an expanded population of cells from cells contained in n UCB units comprising the step of:
  • each UCB units has been preliminary and separately expanded for said cells before step A) ;
  • step (B) expanding the desired cells obtained from the population of cells obtained in step (A) in a suitable medium to produce said expanded population of desired cells.
  • the step (B) can be an optionally step in case of each UCB units has been preliminary and separately expanded for said cells before the step b) of pooling in step A).
  • the method for producing a population of differentiated cells from desired cells contained in n UCB units comprising the step of:
  • each UCB units has been preliminary and separately differentiated for said cells before step A);
  • the step (B) of differentiating can be an optionally step in case of each UCB units has been preliminary and separately differentiated for said cells before the step b) of pooling in step A).
  • the method for producing a population of cells containing activated natural killer (NK) cells comprising:
  • step A producing a population of cells containing activated NK cells from at least n UCB units, or fraction thereof containing said NK cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately expanded for said NK cells before step A);
  • step (B) activating said NK cells obtained from the step (A) in a suitable medium to produce said population of cells containing activated NK cells;
  • the method for producing a population of expanded activated NK cells comprises:
  • step A producing a population of cells containing NK cells from at least n UCB units, or fraction thereof containing said NK cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately expanded and activated for said NK cells before step A);
  • the method for producing a population of expanded, optionally, activated NK cells from n UCB units comprises the step of:
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 2 ⁇ n ⁇ 100 or 3 ⁇ n ⁇ 50, more preferably 3 ⁇ n ⁇ 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • each UCB unit ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
  • density gradient separation more preferably by Ficoll-Paque® density gradient separation
  • HES Hetastarch
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • v) for each of the UCB units obtained in the preceding step separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
  • n UCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells pooling the n UCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells.
  • the method of producing a population of expanded and, optionally, activated NK cells from n UCB units comprises the step of:
  • NK cells contained in one UCB unit separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
  • step vi) of depleting the T cells contained in the pooled NK cells obtained after step v) is not an optionally step and is part of the claimed method.
  • step vi) of depleting the T cells contained in the pooled NK cells obtained after step v) is followed by a step of selecting the NK cells exhibiting the CD56+ biomarker, whether it is still desirable to eliminate remaining non-activated NK cells at this end of the process.
  • the method for producing a population of expanded and, optionally, activated NK cells from n UCB units comprises the step of:
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 2 ⁇ n ⁇ 100 or 3 ⁇ n ⁇ 50, more preferably 3 ⁇ n ⁇ 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • each UCB unit ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
  • density gradient separation more preferably by Ficoll-Paque® density gradient separation
  • HES Hetastarch
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • the method for producing a population of expanded, and, optionally, activated NK cells from n UCB units comprises the step of:
  • n UCB units or fraction thereof containing NK cells, with n > 2, preferably 2 ⁇ n ⁇ 100 or 3 ⁇ n ⁇ 50, more preferably 3 ⁇ n ⁇ 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
  • each UCB unit ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
  • density gradient separation more preferably by Ficoll-Paque® density gradient separation
  • HES Hetastarch
  • step iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
  • the amplification factor for NK cells after the expanding step(s) is at least 100, preferably, 200, 300 or 500 for an expanding/activation step(s) total duration comprised between 9 and 28 days.
  • activated/ expanded NK cells are particularly suitable for preparing activated NK cells, from pooled UCB units, with miss expression of one of the following KIRs: KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2. Consequently, in this case, the activated/expanded pooled NK cells as above prepared will be alloreactive toward cells from others which lack the corresponding KIR ligand and, conversely, will be tolerant of cells from another individual who has the same KIR ligands.
  • a collection, or a therapeutic cells bank of at least 2 different production lots, preferably 3, more preferably 4, of pooled activated/expanded NK-cells obtainable by a method for producing NK cells of the invention, or a collection of at least 2, 3 or 4 fractions of said production lots, and wherein each production lot exhibits a different miss expression of one of the major inhibitory KIRs, preferably selected from the group of KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2 inhibitory KIRs.
  • Such a collection of at least 2 different production lots, preferably 3, more preferably 4, of pooled activated/expanded NK-cells obtainable by a method for producing pooled activated/expanded NK-cells NK cells contained in the composition of the invention is comprised in the present invention.
  • said collection is a collection of storage containers comprises at least 2, 3 or 4 containers that each contains a pooled activated/expanded NK-cells, or fraction thereof, obtainable by a method for producing NK cells of the invention and exhibiting a particular miss expression of one of the major inhibitory KIRs.
  • one production lot, or fraction thereof which is needed in quantity for treating one patient, of the claimed collection can be used for transplantation in a patient in need thereof, preferably a patient exhibiting target cells that do not express the specific major KIR ligand which is recognized by the pooled activated/amplified NK cells production lot which will be transplanted.
  • HLA/KIRs genotyping/phenotyping of UCB/NK cells or patient target cells may be performed by any well-known standards methods.
  • said suitable medium suitable to expand and to activate the NK cells comprised accessory cells and/or at least one suitable NK activated factor.
  • said accessory cells are selected from the group of:
  • - mammals cells preferably human cell, more preferably from HLA-typed collection of cells and, optionally, irradiated cells, particularly gamma-, X- or UV- irradiated cells, gamma- irradiated cells being preferred;
  • said cells from HLA-typed collection of cells are from the PLH cell line, preferably selected from the group of ECACC N°. 88052047, IHW number 9047 and HOM-2, ID n°HC107505, IHW number 9005.
  • said accessory cell is a transformed mammal cell wherein the expression of one gene encoding for a KIR ligand has been inhibited and which further comprises the inhibition or the reduction of the MHC-I expression and/or the inhibition of the expression of the ERK5 gene.
  • the method for preparing such accessory cells is well known by the skilled person (see WO 2012/146702 published on
  • the inhibition or reduction of the MHC-I expression is said accessory cell may be performed by any method well known in the art.
  • said methods are exemplified in the international patent application publication WO2009141729A2.
  • said inhibition or reduction of MHC-I expression is performed by using inhibitor of beta-2-microglobulin gene expression.
  • said accessory cell will be presenting a negative ERK5 phenotype.
  • cell presenting a negative ERK5 phenotvpe means a cell having a reduction of at least 10%, preferably 25% to 90%, for example 25% to 50% or 50% to 75% in the level of expression or the quantity of ERK5 protein present in the cell, in particular in the mitochondrial fraction, compared with its level of expression.
  • the inhibition or reduction of the ERK5 gene expression is said cell may be performed by any method well known in the art.
  • said methods are exemplified in the international patent application publication WO2009141729A2.
  • said inhibition or reduction of gene ER 5 expression is performed by using inhibitor of ER 5 gene expression.
  • said accessory cells have been immortalized, preferably by Epstein Barr Virus (EBV) transformation.
  • EBV Epstein Barr Virus
  • said accessory cell will constitute a cell line that proliferate indefinitely in culture.
  • Methods for immortalizing cells are well known in the art, particularly using the "Epstein Barr virus” (“EBV”) process for immortalize human lymphocyte.
  • EBV Epstein Barr virus
  • said suitable medium comprised as suitable NK activated factor interleukin-2 (IL-2), IL-7 and/or IL- 12 and/or IL- 15, or with alpha- or beta- interferon, preferably human recombinant activated factor.
  • IL-2 NK activated factor interleukin-2
  • IL-7 IL-7 and/or IL- 12 and/or IL- 15, or with alpha- or beta- interferon, preferably human recombinant activated factor.
  • the activation can be carried out using the following possible medium containing NK cells activating factor:
  • DO-9 low molecular heparin + mix of cytokines (strong concentration) SCF, Flt3L, TPO, IL-7 and (low concentration) GM-CSF, G- CSF, IL-6 (CD34+ amplification)
  • J9- 14 low molecular heparin + mix of cytokines (strong concentration) SCF, Flt3L, IL-15, IL-7 and GM-CSF, G-CSF, IL-6 ( low concentration ,NK differentiation).
  • IL-18 and IFN alpha can be also used.
  • the step of depleting the T cells is carried out by a method comprising the step of:
  • the depleting antibody is preferably at least an antibody selected from the group consisting of an anti-CD3, an anti-CD 14, and an anti-CD 20 antibody, preferably an anti-CD3 antibody.
  • each UCB unit or the pooled n UCB units are red cell-/ erythrocytes depleted, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
  • density gradient separation more preferably by Ficoll-Paque® density gradient separation
  • HES Hetastarch
  • each UCB unit or the pooled n UCB units are red cell-depleted by a method comprising the lysis of the red blood cells, particularly by a method including a step of freezing and thawing the cells contained in each of the UCB unit or in the n UCB units pooled cells.
  • the UCB units used in step b) or in step i) are thawed UCB units from frozen stored UCB units.
  • Said pooled UCB units, or fraction thereof containing cells, obtained at the end of the method is preferably stored at a temperature below -70°C, preferably below - 80°C, more preferably in liquid nitrogen.
  • each UCB unit is preliminary diluted in a suitable culture medium, preferably in a RPMI medium before use; and/or
  • the collected cells are resuspended in a suitable culture medium, preferably in a RMPI medium, or in medium type X-VIVOTM (Lonza), AIM-VTM medium (Invitrogen) or CellGroTM (CellGenix), this medium optionally containing fetal bovine serum AB negative (FBS); and/or
  • a suitable culture medium preferably in a RMPI medium, or in medium type X-VIVOTM (Lonza), AIM-VTM medium (Invitrogen) or CellGroTM (CellGenix), this medium optionally containing fetal bovine serum AB negative (FBS); and/or
  • the collected cells from each red-cell depleted UCB unit or from the pooled red-cell depleted UCB units are stored frozen, the collected cells are resuspended in a suitable culture comprising a white cells cryoprotectant.
  • the ratio between the NK cells and the accessory cells present in the suitable medium for NK cells expansion/activation is comprised between 0.01 and 2, preferably between 0.05 and 1.0, more preferably between 0,1 and 0.5.
  • the accessory cells present in the suitable medium for NK cells expansion/activation and the NK cells to be expanded/activated are HLA-KIR mismatched.
  • the invention relates to a method for the production of a pooled, and activated and/or expanded NK cells according to the present invention, wherein said method further comprising a step of CD56+ NK cells enrichment.
  • a method for the production of at least 2, 3, preferably 4 distinct pools a population of expanded, optionally, activated NK cells from UCB units according to the present invention wherein the major HLA class I group recognized by NK cells for each pooled n UCB is different and selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL2.
  • HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3
  • HLA C group 2 which is recognized by KIR2DL2.
  • NK cells originated from at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 ⁇ n ⁇ 100 or 3 ⁇ n ⁇ 50, more preferably 3 ⁇ n ⁇ 25, and, preferably, wherein said n UCB units further present the same pattern for major HLA class I groups genotype, preferably wherein the major HLA class I group recognized by NK cells for each pooled n UCB is different and selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL2.
  • said population of cells obtainable by the above method further exhibiting for each pooled n UCB a miss expression of one of the KIRs selected from the group of KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2.
  • the invention also relates to a pharmaceutical composition according to the present invention further comprising a pharmaceutically acceptable carrier.
  • pharmaceutically acceptable carrier refers to a compound or a combination of compounds made part of a pharmaceutical composition that do not cause secondary reactions and that, for example, facilitate the administration of the active compounds, increase their lifespan and/or effectiveness in the body, increase their solubility in solution or improve their preservation.
  • Said pharmaceutically acceptable carriers are well known and will be adapted by those persons skilled in the art according to the nature and the mode of administration of the active compounds selected.
  • the invention is directed to a product or a composition
  • a product or a composition comprising a collection of storage containers for mammalian cells, preferably for human cells, wherein each of said storage containers contains a fraction of a production lot of a population of cells, preferably pooled UCBs NK cells obtainable or obtained by the above described method and a therapeutic antibody which can be bound by CD 16.
  • said collection of storage containers for mammalian cells according to the present invention contains expanded and/or activated NK cells.
  • said collection of storage containers for mammalian cells according to the present invention or said composition according to the present invention contains at least 10 7 , preferably 2 to 10. 10 7 or 10 to 100. 10 7 activated and/or expanded NK cells, depending of the weight of patient to be treated.
  • each of said storage containers collection according to the present invention, or said composition according to the present invention contains NK cells and being essentially free of CD3+ T cells, preferably less than 0.1 % or less than 0.01 ,.
  • said collection of storage containers for mammalian cells according to the present invention or said composition according to the present invention contains:
  • the invention is directed to a storage container of a collection of storage containers according to the present invention, or said composition according to the present invention, for its use for suppressing the proliferation of tumor cells, preferably for the prevention and/or the treatment of cancer or for the treatment of infection.
  • said tumor cells or cancer to be treated are selected from the group of hematologic malignancy tumor cells, solid tumor cells or carcinoma cells, preferably leukemia cells, acute T cell leukemia cells, chronic myeloid lymphoma
  • CML cells acute myelogenous leukemia cells, chronic myelogenous leukemia (CML) cells, multiple myeloma cells, or lung, colon, prostate, glyoblastoma cancer.
  • the pooled activated and/or expanded NK cells as prepared according to the invention or said composition according to the present invention may also useful for the treatment of infectious diseases or dysimmune/autoimmune diseases.
  • the cells contained in the storage container or the composition according to the present invention are administered to the subject by a systemic or local route, depending of the disease/pathology to be treated.
  • said compounds may be administered systemically by intramuscular, intradermal, intraperitoneal or subcutaneous route, or by oral route.
  • the composition comprising the antibodies according to the invention may be administered in several doses, spread out over time.
  • Figures 1-1 to 1-3 (sub-figures 1, 2 and 3 of Figure 1) is a schema illustrating anexample of a manufacture process of the present invention.
  • Figures 2 and 3 illustrate the NK proliferation obtained after or without CD3 depletion.
  • Figure 4 illustrates the NK proliferation obtained from pooled CD3-depleted UCB units.
  • Figure 5 illustrates the NK proliferation obtained from 5 pooled CD3-depleted UCB units.
  • Figure 6 illustrates the NK proliferation obtained from pooled UCB units without prior CD3-depletion.
  • Figure 7 illustrates the NK proliferation from pooled UCB units after 9 days of culture with CD3-non depleted UCBs.
  • Figure 8 illustrates the NK proliferation amplification factor obtained with 2 KIR-HLA matched UCBs and amplified with PLH accessory cells
  • Figure 9 illustrates the NK proliferation amplification factor obtained with 2 KIR-HLA mismatched UCBs amplified with PLH accessory cells.
  • FIG. 10A-10B illustrates Example 7, first experiment.
  • FIG. 11A-11B illustrates Example 7, second experiment.
  • Figures 12A-12C Percentage of patient cells lysis induced by the combination of NK cells + mAb for p45 B lymphoma patient cells (Fig.l2A) and for B-CLL p53 and p46 patient cells (Fig. 12B and 12C).
  • Figures 13A-13D Percentage of cell line cells lysis induced by the combination of NK cells + mAb for Daudi cell line (Fig.l3A), Raji cell line (Fig. 12B), Ri-1 cell line (Fig. 12C) and SUDHL4 cell line (Fig. 13D).
  • Figures 14A-14D Study of anti-CD20 dose effect (E:T 1/1) on cell lines.
  • PLH (Example 4): no HLA-C1, ECACC bank n°88052047, IHW number 9047
  • This cell line was obtained by EBV immortalization of B lymphocytes coming from a Scandinavian woman. This cell is completely HLA genotyped and have the particularity to express HLA Class I alleles from C group 2, A3/A11 and Bw4 types but not from C group 1 (complete informations on IMGT/HLA database).
  • This cell line is used as accessory cell for NK amplification/activation protocol because it allows to choose a specific HLA mismatch between accessory cell and UCBs (expressing HLA C group 1, and potentially the associated inhibitory receptor
  • HOM-2 (Example 4): no HLA-C2, ID n°HC107505, IHW number 9005
  • This cell line was obtained by EBV immortalization of B lymphocytes coming from a Canadian/North American woman. This cell is completely HLA genotyped and have the particularity to express HLA Class I alleles from C group 1, A3/A11 and Bw4 types but not from C group 2 (complete informations on EVIGT/HLA database).
  • This cell line is used as accessory cell for NK amplification/activation protocol because it allows to choose a specific HLA mismatch between accessory cell and UCBs (expressing HLA C group 2, and potentially the associated inhibitory receptor KIR2DL1). Being transformed by EBV infection increases its NK activation ability because of membrane expression of some viral induced ligands for NK activating receptors.
  • 1/Density gradient cell separation medium of Ficoll and sodium diatrizoate used for the separation of lymphocytes Histopaque- 1077 from Sigma Aldrich, Saint Louis, MO, USA
  • 3/Cellular culture medium RPMI 1640 Glutamax from Invitrogen, Carlsbad, CA, USA, purchased from France distributor Thermo Fisher Scientific
  • UCBs were processed by ficoll UCB mononuclear cells isolation before first freezing.
  • CD3 depletions were done with a manual magnetic depletion kit.
  • HLA A3/A11 recognized by KIR3DL2
  • HLA Bw4 recognized by KIR3DL1
  • HLA C group 1 recognized by KIR2DL2/3
  • HLA C group 2 recognized by KIR2DL1.
  • Pooled UCBs are activated with an accessory cell missing one of the HLA recognized by the expressed pooled UCBs iKIRs.
  • NK cells were amplified for 20-24 days.
  • Cytokines used are IL-2 (lOOIU/ml) and IL-15 (5ng/ml). These concentrations can be modified to obtain similar results.
  • Accessory cells are EBV-immortalized cell lines (cells expressing virus induced activating ligands) with specific HLA genotypes (one major HLA class I group missing).
  • Accessory cells can be irradiated by different ways with different irradiation doses (here we mainly used 20 seconds UV irradiation, but also 105Gy gamma irradiation for the last experiment, that showed better amplification results).
  • Irradiated accessory cells can be used with or without prior cryopreservation: freshly irradiated cells or as irradiated cryopreserved cells (irradiation just before freezing).
  • NK cells derived from pooled CD3-depleted UCBs represented already more than 90% of alive cells at the end of the process.
  • the CD56 selection step is not essential, but will probably improve NK purity and be preferable (and potentially totally required) for a pharmaceutical product.
  • UCBs will be processed differently before first freezing, using a GMP- compliant method such as HetastarchTM or PrepaCyte CBTM device (or other existing and clinically accepted method).
  • GMP- compliant method such as HetastarchTM or PrepaCyte CBTM device (or other existing and clinically accepted method).
  • - NK amplification culture duration can be optimized: from 14 to 28 days.
  • IL-2 and IL-15 concentrations can be optimized.
  • the CD3-depletion will be done with an automatic clinically accepted device such as cliniMACS.
  • the CD3-depletion can also be done just after erythrocyte elimination and volume reduction (maybe better results in term of NK recovery).
  • the preferentially CD3- depleted UCB units can be pooled at various moments of the process: before amplification culture, during amplification culture, or at the end of the amplification culture.
  • UCB mononuclear cells obtained by Ficoll separation were cryopreserved, then thawed and CD3-depleted using a stem cell kit for a part.
  • Three CD3-depleted or total UCBs with same the major HLA class 1 groups A3/A11+, Bw4+,C1+,C2+ genotype were pooled and cultured for 21-25 days with IL-2, IL-15 and irradiated accessory cells PLH (A3/Al l+,Bw4+,Cl-,C2+ genotype) added each 4 days.
  • UCB mononuclear cells obtained by Ficoll separation were cryopreserved, then thawed and CD3-depleted using a stem cell kit.
  • Three CD3-depleted UCBs with same the major HLA class 1 groups A3/Al l-,Bw4+,Cl-,C2+ genotype were pooled and cultured for 21-25 days with IL-2, IL-15 and irradiated accessory cells HOM-2
  • Alive NK cells were regularly counted using the MUSE Millipore system and flow cytometry characterization of cellular composition in the culture.
  • cytotoxicity was evaluated against well-known K562 target cells, and tumoral cells for experiment 2 and 3 (2h incubation with NK:K562 ratio 3: 1, NK:purified B lymphoma cells ratio 3: 1, NK:AML cells (in total PBMC sample of the patient) ratio 10: 1).
  • UCB 1 HLA Al l :01/A29:02, B35:01/B44:02, C04:01/C16/01 > HLA A3/A11+, Bw4+, C1+, C2+
  • UCB2 HLA Al l :01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2+
  • UCB3 HLA A2/A3, B 18/B51, C5/C14 > HLA A3/A11+, Bw4+, C1+, C2+ NK proliferation from isolated UCBs show better results after CD3-depletion because T lymphocytes are in competition with NK cells for proliferation with the cytokines used (and CD8-T lymphocytes directed against EBV antigen are also stimulated by accessory cells).
  • NK amplification factor is relatively low in this experiment due to technical issue.
  • Activating receptors are well expressed, and cytotoxicity against common target K562 of cultured NK cells is highly better than with un-activated NK cells.
  • UCB 1 HLA AO 1/02, B27:05/B40:02/C02:02/C15:02 > HLA A3/A11-, Bw4+, C1-, C2+
  • UCB2 HLA A2/A31, B50/B51, C06:02/15:02 > HLA A3/A11-, Bw4+, C1-, C2+
  • UCB 3 HLA A23/A24, B44/B44, C4/C5 > HLA A3/A11-, Bw4+, C1-, C2+
  • NK proliferation from pooled CD3-depleted UCBs with this new genotype is similar to NK proliferation with isolated CD3-depleted UCBs.
  • NK amplification factor is higher in this experiment (no technical issue), but can still be improved by protocol optimization specifically for the new accessory cell line.
  • Activating receptors are very well expressed. Cytotoxicity against common target K562 of cultured NK cells is highly better than with unactivated NK cells, and we observe a significant cytotoxicity against B lymphoma tumoral cells with a 2 hours incubation.
  • NK cells Pooling CD3-depleted UCBs with another major HLA groups genotype, and amplifiying NK cells with another iKIR-HLA mismatch and another accessory cell line is feasible. Amplified NK cells are well-activated.
  • UCBs HLA A3/A11-, Bw4+, C1+, C2- Table 3:
  • NK proliferation from 5 pooled CD3-depleted UCBs is good.
  • Activating receptors are very well expressed. Cytotoxicity against common target K562 of cultured NK cells is highly better than with unactivated NK cells, and we observe a small specific cytotoxicity against AML tumoral cells with a 2 hour incubation (but we could'nt observe cytotoxicity after 20h because at this time patient cells died because of thawing).
  • UCB 1 HLA A2:01/A68:01 ; B38:01/B57:01 ; C6:02/C12:03 > C1+, C2+, A3/A11-, Bw4+
  • UCB 2 HLA Al :01/A2:01 ; B52:01/B57:01 ; C6:02/C12:02 > C1+, C2+, A3/A11-, Bw4+
  • UCB 3 HLA A02/02; B 15:09/B50:02; C06/C07 > C1+, C2+, A3/A11-, Bw4- NK amplification can be similar in isolated or pooled UCBs without prior CD3- depletion.
  • UCB 1 HLA Al l:01/A29:02, B35:01/B44:02, C04:01/C16/01 > HLA A3/A11+, Bw4+, C1+, C2+
  • UCB2 HLA Al l:01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2+
  • UCB1 HLA A02:02/30:01, B42:01/B53:01, C04:01/17:01 > HLA A3/A11-, Bw4+, C1-, C2+
  • UCB2 HLA Al l:01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2 Table 5:
  • NK cells from CD3-non depleted iKIR-HLA mismatched pooled UCBs showed a lower amplification factor, and pooling these UCBs after 9 days amplification gave better NK amplification. They showed an in vitro similar good cytotoxicity against B lymphoma tumoral cells (overnight, ratio E:T 1: 1).
  • EXAMPLE 6 PERSPECTIVES
  • the manufacturing process of pooled activated/expanded NK cells according to the present invention will be adapted to the pharmaceutical regulatory obligations, and every step of the process adapted for the best quality guarantee.
  • acceptance criteria of UCB units must be set, such as more than 1.4 or 1.6 10 6 total nucleated cells (currently 1.85 10 6 total nucleated cells for our local UCB bank), with potentially a minimal threshold for the NK percentage such as 7% (3-15% NK generally observed in UCB total nucleated cells).
  • CD3-depletion of UCBMCs can be better adapted to regulatory compliances and/ or GMP process for pharmaceutical uses, for example with an adapted clinically upgradable material such as CliniMACSTM, and by determining the best step time for CD3-depletion whether it is needed, before or after first cryopreservation step for the best cell recovery and the best CD3-depletion quality.
  • an adapted clinically upgradable material such as CliniMACSTM
  • the freezing, cryopreservation and thawing procedures for UCBMC can be improved using authorized procedures for clinical applications after validation of the manufacturing process.
  • Adapted material for bag closed system can be used and cryopreservation conditions (media, cell concentration) can be easily optimized by the skilled person for the method of the present invention. These optimization steps only should certainly improve the total cell recovery after thawing.
  • the acceptance criteria for each thawed UCBMCs to go further into the manufacturing process according to pharmaceutical guidelines should be set.
  • HLA-genotyping and inhibitory KIR expression evaluation procedures should be validated to select the different UCB units allowed to be pooled for the amplification/activation step: selection criteria should be set for each lot.
  • GMP compliant upgradable accessory cells whether they will be included in the method of the invention, with a final screening on NK amplification:activation for clones selection.
  • Final accessory cells must be well- characterized for use in a therapeutic agent production procedure. This optimization step could also improve NK amplification/activation results.
  • irradiation procedure will be optimized and validated for the best amplification/activation results with clinically adapted quality parameters, and acceptance criteria of cryopreserved irradiated accessory cells lots will be set, including unproliferation evaluation, cells viability, EBV inactivation ...etc.
  • a dynamic culture closed system in bioreactors will be used for amplification/activation step with at least 5, preferably 10 pooled UCB units, such as the Wave systemTM (GE Healthcare) already tested for NK culture.
  • Wave systemTM GE Healthcare
  • culture medium used for the amplification/activation step using animal serum-free media such as X-VIVOTM media from Lonza, CellGro SCGMTM from Cellgenix or AIM VTM from Invitrogen (already tested for NK cultures) can be used.
  • animal serum-free media such as X-VIVOTM media from Lonza, CellGro SCGMTM from Cellgenix or AIM VTM from Invitrogen (already tested for NK cultures) can be used.
  • CD56 positive selection of amplified/activated NK cells using an adapted clinically upgradable material such as CliniMACSTM will be used.
  • a step of acceptance criteria of final amplified/activated products must be included in the process, including product identification steps (genetic stability, chimerism, phenotype) and a standard potency evaluation procedure.
  • NK cells before and after the process of the present invention will be checked, looking at their karyotype (for example by G- banded karyotyping or cytoscanHD microarray methods wel-known by the sfilled person), and the chimerism of the final pooled NK cells from the different donors must be defined (for example by standard multiplex PCR STR methods).
  • NKG2D NK phenotypical markers
  • NKG2C NKG2C
  • CD94 NKp44
  • NKp30 NKp46
  • CD158 NKp46
  • each product lot will be tested with a validated cytotoxicity assay against commonly used well-known target cells
  • the absence of contaminations such as bacteria, fungi, mycoplasma and viruses (particularly EBV) must be verified during or after the final step of the process, as the absence of endotoxins and cytokines used during the manufacturing process.
  • the population of cells obtained is frozen, kept in liquid nitrogen and thawed before their use
  • the 5 Ficoll/depleted nUCB units cells obtained in the preceding step are pooled.
  • the pooled NK cells obtained are thus expanding and activating by contacting the NK cells contained in the pool, in a suitable medium to produce said population of pooled expanded and activated NK cells as described before, for an expanding/activation step(s) total duration comprised between 9 and 28 days
  • Culture medium RPMI FBS 10% IL-2 100 IU/ml 1-15 5ng/ml;
  • Amplification factor at D21 256.6 ; 99,5% of NK cells, 100% CD69+, 84,6% CD16+ (directly used for cytotoxicity test).
  • lymphoma B tumor sample (97% tumoral cells) ;
  • B-CLL B-cell chronic lymphocytic leukemia
  • the patient cells sample are thawing and, l-2h after thawing, are used in cytotoxicity assay
  • 50,000 target cells/microwell 200 ⁇ 1 in final (96-well microplate conical bottom), RPMI medium FBS (Foetal bovine serum) 10%, IL-2 100 IU/ml, +/- rituximab
  • Fresh (not freezed- thawed) pooled UCBs NK cells are used (21 days after their production);
  • Ratio NK cells / tumoral cells as indicated in the figures 6A-6B.
  • the pooled UCBs NK cells mediate Antibody-Dependent Cell- mediated Cytotoxicity on cellules CD20+tumoral cells.
  • the pooled UCBs NK cells mediate Antibody-Dependent Cell- mediated Cytotoxicity on cellules CD20+tumoral cells.
  • EXAMPLE 8 Anti CD20 TG20 act as a synergic manner to increase ADCC involved by NK cells
  • TG20 (LFB S.A., Les Ulis, France, TG Therapeutics Inc., New York, N.Y.) to decrease progression or cure hematological cancers such as non-Hodgkin B-cell lymphoma or B-Cell chronic lymphocytic leukemia.
  • TG20 is also called TG-20, Ublituximab, LFB-R603, TG-1101 or TGTX-1 101.
  • TG-20 Ublituximab
  • LFB-R603 TG-1101
  • TGTX-1 101 TGTX-1 101.
  • TG20 (Ublituximab) is a chimeric recombinant IgGl monoclonal antibody directed against human CD20 with potential antineoplastic activity. Ublituximab specifically binds to the B cell- specific cell surface antigen CD20, thereby potentially inducing a B cell-directed complement dependent cytotoxicity (CDC) and antibody-dependent cell-mediated cytotoxicity (ADCC) against CD20-expressing B cells, leading to B cell apoptosis.
  • CD20 is a non- glycosylated cell surface phosphoprotein that is exclusively expressed on B cells during most stages of B cell development and is often overexpressed in B-cell malignancies.
  • Ublituximab has a specific glycosylation profile, with a low fucose content, that may enhance its ADCC response against malignant B cells.
  • NK cells are able to interact with cytotoxic monoclonal antibodies and lyse cells which are recognized by these monoclonal antibodies. This property is well known as "antibody dependent cellular cytotoxicity" (ADCC).
  • ADCC antibody dependent cellular cytotoxicity
  • This example demonstrates in vitro on clinical samples from patients that anti CD20 TG20 act as a synergic manner to increase ADCC involved by expansed and activated NK cells from pooled umbilical cord blood.
  • NK cells are produced regarding good manufacturing process (GMP) and characterized in order to have 99% of purity at day 21.
  • ADCC assays were performed on patient samples and also on 5 cell lines.
  • mAb concentration 10 ⁇ g/ml
  • TG20 is compared to gold standard Rituximab (Genentech, Roche) TG20 and Rituximab are pre-incubated 15 min at room temperature.
  • E:T ratio Variation of E:T ratio observed between assays is technically experience-dependent. Each sample of patient respond as an independent manner to the NK treatment alone. We observed for low E:T ratio 49%, 23% or 37% of lysis induced by NK cells alone for respectively p45, p46 and p53 patients. With a higher E:T ratio lysis induced by NK cells alone increased as 58% for p45 and 39% for p46.
  • NK cells and mAb increase dramatically percentage of target lysis in all cases. Compare to treatment of NK cells alone, we observe an increase of about 40% with the combination of NK cells + mAb in patient p45, an increase of 145 % for low E:T ratio and 50% for high E:T ratio in patient p46 and an increase of 29% for NK+TG20 ⁇ and 18% for NK+ Rituximab ⁇ in patient p53.
  • Daudi Bovine lymphoma, high CD20
  • Raji Burkitt lymphoma, low CD20
  • SUDHL4 DL-BCL GC (Diffuse Large B Cell Lymphoma Germinal Center)
  • Rl- 1 DL-BCL
  • ABC Active B-Cell
  • HL60 AML (Acute Myeloid Leukaemia)
  • mAb concentration 0.1 ; 1 ; 5 et 10 ⁇ g/ml
  • TG20 is compared to gold standard Rituximab (Genentech, Roche)
  • TG20 and Rituximab are pre-incubated 15 min at room temperature. After NK addition, incubate 4h at 37 °C before flow cytometry analysis

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Abstract

The invention relates to the field of cell therapy, particularly NK cell mediated therapy associated with antibodies. The present invention is directed to methods and compositions for increasing the efficiency of therapeutic natural killer cells (NK cells) and/or antibodies, wherein said methods or compositions comprise the use of pooled NK cells from umbilical cord blood units (UCBs), preferably alloreactive NK cells, in combination with a therapeutic antibody in order to enhance the efficiency of the treatment in human subjects, in particularly through an increase in antibody-dependent cell-mediated cytotoxicity (ADCC) mechanism. The present invention relates to said composition as a pharmaceutical composition, preferably for its use for the treatment of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease. Finally, the present invention is also directed to a method of treatment of a disease in a human subject in need thereof, comprising the administering to said subject said pooled NK cells from UCBs, preferably alloreactive, in combination with a therapeutic antibody which can be bound to said NK cells.

Description

POOLED NK CELLS FROM UMBILICAL CORD BLOOD ASSOCIATED WITH ANTIBODIES AND THEIR USES FOR THE TREATMENT OF DISEASE
The invention relates to the field of cell therapy, particularly NK cell mediated therapy associated with antibodies. The present invention is directed to methods and compositions for increasing the efficiency of therapeutic natural killer cells (NK cells) and/or antibodies, wherein said methods or compositions comprise the use of pooled NK cells from umbilical cord blood units (UCBs), preferably alloreactive NK cells, in combination with a therapeutic antibody in order to enhance the efficiency of the treatment in human subjects, in particularly through an increase in antibody-dependent cell-mediated cytotoxicity (ADCC) mechanism. The present invention relates to said composition as a pharmaceutical composition, preferably for its use for the treatment of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease. Finally, the present invention is also directed to a method of treatment of a disease in a human subject in need thereof, comprising the administering to said subject said pooled NK cells from UCBs, preferably alloreactive, in combination with a therapeutic antibody which can be bound to said NK cells.
NK cell effector functions can be exploited for the treatment of some tumors through their ability to mediate ADCC. NK cell recognition of an antibody-coated target cell, particularly by recognizing the NK cell Fc receptor, CD 16 (FcyRIIIa), results in rapid NK cell activation and degranulation.
Different therapeutic strategies based on the use of therapeutic antibodies have been developed to deplete target cells, particularly diseased cells such as virally- infected cells, tumor cells or other pathogenic cells. This includes, for instance, the use of therapeutic Monoclonal antibodies (mAbs) that specifically target tumor cells take advantage of the ADCC effector pathway to tip the balance of an interrogating NK cell in the favor of the activating receptors resulting in tumor cell destruction and an antitumor immune response (K.L. Anderson et al., Journal of Biomedicine and Biotechnology, Volume 2011 (2011), Article ID 379123, 7 pages). Tumor-targeted mAbs that initiate NK cell ADCC have been used clinically. Among these mAbs, we can cited here the antibodies targeting CD20 (such as Rituximab or Ublituximab), Her2/neu (such as Trastuzumab or Pertuzumab), epidermal growth factor receptor (EGFR) (such as Cetuximab or Matuzumab), CD52 (such as alemtuzumab) and disaloganglioside (GD2) (such as Dinutuximab) are examples of clinically successful or in clinal trial antibodies whose mechanisms include NK cell- mediated ADCC. Additional examples of therapeutic antibodies under development are disclosed in the art. Natural Killer (NK) cells are a fundamental component of the innate immune system. They are capable of recognizing and destroying tumor cells as well as cells that have been infected by viruses or bacteria (Lanier LL, 2008; Nat Immunol 9: 495-502).
Identification and characterization of NK cell receptors and their ligands over the last two decades have shed light on the molecular mechanisms of NK cell activation by tumor cells. The finding of inhibitory receptors supported the 'Missing self ' hypothesis proposed by Karre whose pioneering work showed that NK cells killed tumor cells that lacked major histocompatibility complex (MHC) class-I molecule. The inhibitory receptors recognize MHC class I molecules whereas, the activating receptors recognize a wide variety of ligands (P. A. Mathew, J Cell Sci Ther, Volume 3, Issue 7).
NK cells are responsible of the graft versus leukemia (GvL) effect with minimal
GvH (Graft versus Host) and HvG (Host versus Graft) effects, pointing attention to the development of immunotherapies involving NK cells. Data from several laboratories suggest that exploiting NK cell alloreactivity could have a large beneficial independently of NK cell source. Mismatched transplantation triggers alloreactivity mediated by NK cells, which is based upon "missing self recognition". Donor- versus- recipient NK cell alloreactions are generated between individuals who are mismatched for HLA-C allele groups, the HLA-Bw4 group and/or HLA-A3/11. KIR ligand mismatching is a prerequisite for NK cell alloreactivity because in 20 donor-recipient pairs that were not KIR ligand mismatched in the graft-versus-host direction, no donor alloreactive NK clones were found.
Another interesting point with NK cells is that even if NK cells also recognize the self-identity molecules (HLA molecules) mainly with their inhibitory receptors, they are activated through a complex equilibrium of activating signal and inhibiting signal and need the activating signal expressed only by infected, abnormal or tumoral cells to kill the cells. Then donor selection is easier because with NK cells alone donor and patient don't need to express quite exactly the same major HLA alleles (HLA match > 4/6 for total umbilical cord blood (UCB) graft for example). In contrast, NK expressing inhibitory receptors when the recipient doesn't express the corresponding HLA (absence of inhibitory signal = iKIR-HLA mismatch) lead to better tumor killing without leading to GvHD.
Even if NK cells have a natural cytotoxic potential, their cytotoxic activity can be improved in vitro by different activation mechanisms, and most of these mechanisms are also able to amplify NK cells (with variable amplification factors) leading to more therapeutic cells, more efficient.
Finding a good way to amplify/activate NK cells is important to improve the therapeutic potential of these cells (quantity and potency).
In vitro activation protocols include cytokines and growth factor use, such as IL-
2, IL-15, IL- 18, IL-21, SCF, Flt3-L (...) with or without accessory cells such as peripheral blood mononuclear cells, tumoral cells or cell lines (see M. Villalba Gonzales et al., WO2009/141729). Using accessory cells presenting a particular iKIR-HLA mismatch (4 major iKIR-HLA mismatch: HLA A3/A11 ; HLA Bw4; HLA CI ; HLA C2 and associated iKIR receptors).
Umbilical cord blood (UCB) has been shown to be a good source of NK cells, with higher NK cells percentages and good in vivo expansion/activation (see M. Villalba Gonzales et al., WO2012/146702). The depletion of cells bearing the antigen specifically recognized by the antibody can be mediated through the mechanism of ADCC, complement dependant lysis, and direct antitumor inhibition of tumor growth through signal given via the receptor targeted by the antibody. These antibodies which represent a novel efficient approach to human therapy, particularly for treatment of tumors, do not always exhibit alone a strong efficacy. For example, while rituximab, alone or in combination with chemotherapy was shown to be effective in the treatment of certain Non-Hodgkin's Lymphoma (NHL) grades, a significant % of patients with low grade NHL can exhibit low clinical response using rituximab.
There is therefore a need in the art for increasing the efficiency of the therapeutic antibodies. Novel approaches to enhance the efficacy of the therapeutic antibodies have been disclosed. Some of these approaches are based on the increase of the ADCC mechanism in vivo, when therapeutic antibodies are administrating in combination of alloreactive natural killer (NK) cells. For this approach, UCB unit can be used to provide the desired NK cells contained in one UCB unit . Nevertheless, and despite the possibility to amplify and activate the NK cells contained in one UCB unit with a good rate of amplification, it is will be desirable to provide these NK cells product, for clinical therapies, available, purity, with high expansion rates and activation state and exhibiting NK cells cytotoxic activity.
In addition, it would be desirable that such method based on the administrating of alloreactive natural killer (NK) cells from UCB unit in combination simultaneously, separatively or sequentially with therapeutic antibodies, can be carried out from a large quantity of cells, particularly activated NK cells, in a same batch (production lot), expected to treat at least more than 1, preferably, 50, more preferably around 100 patients, therapeutic agents needing to show less variability as possible for said cells.
To this end, it would be desirable to provide a method which offers the ability to obtain in a same lot of production, a large quantity of specific enriched cell populations, with a cell-manufacturing process which complies with the good manufacturing practice (cGMP), commercial-scale production and chemistry, manufacturing and controls standards of regulatory agencies.
This is the object of the present invention.
For the first time, and in a surprising manner, the Applicant succeeded in implementing a method allowing the enhance of the ADCC efficacy of a therapeutic antibody by combining said antibody with alloreactive human amplified and/or activated NK cells in which said amplified and/or activated NK cells have been obtained from a pooled UCB units.
The inventors demonstrate here that the efficiency of a therapeutic antibody can be greatly enhanced by the co- injection/administrating of selected, alloreactive amplifying/activating and pooling UCB NK cells from different donors and said therapeutic antibody.
According to a first embodiment, the present invention relates to a pharmaceutical composition comprising a therapeutic antibody, which can be bound by a natural killer cells (NK cells), preferably by a Fc receptor, and a population of natural killer cells (NK cells), preferably alloreactive NK cells, wherein said cells population is obtained by a method comprising the steps of:
(a) providing at least n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 < n < 50; and
(b) pooling said at least n UCB units, or fraction thereof containing said NK cells, to produce said population of NK cells.
In a preferred embodiment, said composition containing said therapeutic antibody and said NK cells population according to the present invention is a composition or a product as a combined preparation for simultaneous, separate or sequential use.
In a preferred embodiment, said therapeutic antibody of said composition according to the present invention is a monoclonal antibody or a fragment thereof capable to bind said NK cells Fc receptor, and wherein said monoclonal antibody, or fragment thereof, comprises at least the 6 complement determining regions (CDRs) of the heavy and the light chain of said antibody specific of the antigen of the subject cell which is desired to target.
In a preferred embodiment, said NK cells Fc receptor of said composition according to the present invention said NK cells Fc receptor is the FcyRIIIa receptor
(CD 16). In a preferred embodiment, said therapeutic antibody of said composition according to the present invention is an antibody whose mechanisms include NK cell- mediated ADCC, preferably selecting from the group consisting of an anti-CD20, an anti-Her2/neu, an anti-epidermal growth factor receptor (EGFR), and an anti- ganglioside GD2 antibody (anti-GD2).
In a preferred embodiment, said therapeutic antibody of said composition according to the present invention is a human, humanized or chimeric antibody or a fragment thereof.
In a preferred embodiment, said therapeutic antibody of said composition according to the present invention is selected from the group of:
• Anti-CD20
Rituximab, Ublituximab (also called TG20, TGR- 1101), Obinutuzumab, Ocaratuzumab, Ocrelizumab, Odulimomab , Ofatumumab, Tositumomab ; Veltuzumab, FBTA05 or Ibritumomab tiuxetan;
· Anti-HER2/Neu
Trastuzumab, Ertumaxomab or Pertuzumab;
• Anti-EGFR
Cetuximab, Futuximab, Imgatuzumab, Matuzumab, Necitumumab or Nimotuzumab;
• Anti-GD2
Dinutuximab; and
• Anti-CD52
Alemtuzumab.
Additional examples of therapeutic antibodies whose mechanisms include NK cell-mediated ADCC are well known by the skilled person and disclosed in the art, and is part of the present list of therapeutic antibodies and thus comprised in the present invention.
In a preferred embodiment the therapeutic antibody is not coated at the surface of the NK cells before its administration.
In another embodiment the therapeutic antibody is binding at the surface of the NK cells via the binding between its Fc portion and the CD 16 receptor presents at the surface of the NK cells.
The terms "antibody" or "antibodies" are used interchangeably in the broadest sense and include monoclonal antibodies (e.g., full length or intact monoclonal antibodies), polyclonal antibodies, multivalent antibodies or multispecific antibodies (e.g., bispecific antibodies so long as they exhibit the desired biological activity).
More particularly, such molecule consists in a glycoprotein comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds. Each heavy chain is comprised of a heavy chain variable region (or domain) (VH) and a heavy chain constant region. The heavy chain constant region is comprised of three domains, CHI, CH2 and CH3. Each light chain is comprised of a light chain variable region (VL) and a light chain constant region. The light chain constant region is comprised of one domain, CL. The VH and VL regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR). Each VH and VL is composed of three CDRs and four FRs, arranged from amino- terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4. The variable regions of the heavy and light chains contain a binding domain that interacts with an antigen. The constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g. effector cells) and the first component (Clq) of the classical complement system.
The heavy chains of immunoglobulins can be divided into three functional regions: the Fd region, the hinge region, and the Fc region (crystallizable fragment). The Fd region comprises the VH and CHI domains and, in combination with the light chain, forms Fab - the antigen-binding fragment. The Fc fragment is responsible for the immunoglobulin effector functions, which includes, for example, complement fixation and binding to cognate Fc receptors of effector cells. The hinge region, found in IgG,
IgA, and IgD immunoglobulin classes, acts as a flexible spacer that allows the Fab portion to move freely in space relative to the Fc region.
The term « Monoclonal Antibody » is used in accordance with its ordinary meaning to denote an antibody obtained from a population of substantially homogeneous antibodies, i.e. the individual antibodies comprising the population are identical except for possible naturally occurring mutations that may be present in minor amounts. In other words, a monoclonal antibody consists in a homogenous antibody resulting from the proliferation of a single clone of cells (e.g., hybridoma cells, eukaryotic host cells transfected with DNA encoding the homogenous antibody, prokaryotic host cells transformed with DNA encoding the homogenous antibody, etc.), and which is generally characterized by heavy chains of a single class and subclass, and light chains of a single type. Monoclonal antibodies are highly specific, being directed against a single antigen. Furthermore, in contrast to polyclonal antibodies preparations that typically include different antibodies directed against different determinants, or epitope, each monoclonal antibody is directed against a single determinant on the antigen.
In a second aspect, in the composition according to the present invention, i) said cells population of NK cells is obtained by a method further comprising the step of: (c) depleting the T cells contained in the pool obtained in step (b); or
ii) said cells population of NK cells is obtained by a method comprising the step of depleting the T cells contained in each of the n UCB units before the step (b) of pooling.
In a preferred embodiment, in the composition according to the present invention, said cells population of NK cells is obtained by a method wherein said n UCB units when pooled present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells.
In another preferred embodiment, in the composition according to the present invention, said cells population of NK cells is obtained by a method wherein said major HLA class I group is selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL1.
In another preferred embodiment, in the composition according to the present invention, said population of NK cells is obtained by a method comprising further a method of expanding said population of NK cells from cells contained in said n UCB units, and wherein, - optionally each UCB units has been preliminary and separately expanded for said NK cells before the step of pooling said at least n UCB units; and/or
- expanding the desired cells obtained from the population of cells obtained after the step of pooling said at least n UCB units in a suitable medium to produce said expanded population of desired cells.
In another preferred embodiment, in the composition according to the present invention, said population of NK cells is an activated population of NK cells, obtained by a method further comprising a step of activating said population of NK cells.
In another preferred embodiment, in the composition according to the present invention, said population of NK cells is an activated population of NK cells wherein:
- optionally each UCB units has been preliminary and separately expanded and activated for said NK cells before the step of pooling said at least n UCB units; and/or
- activating the desired cells obtained from the population of cells obtained after the step of pooling said at least n UCB units in a suitable medium to produce said activated population of desired cells.
In a third aspect, in the composition according to the present invention, said population of NK cells is obtained by a method selected in the group of methods consisting of:
A) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) depleting the T cells contained in each UCB unit;
v) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days; and
vi) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells.
B) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells; and
vi) depleting the T cells contained in the pooled NK cells obtained after step v).
C) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit; iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) depleting the T cells contained in each UCB unit;
v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells; and vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably the amplification factor for NK cells after the expanding step(s) is at least 100 or 300 for an expanding/activation step(s) total duration comprised between 9 and 28 days.
D) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, or by a step of freezing and thawing;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells;
v) depleting the T cells contained in the pooled NK cells obtained after step iv; and
vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably the amplification factor for NK cells after the expanding step(s) is at least 100 or 300 for an expanding/activation step(s) total duration comprised between 9 and 28 days In a fourth aspect, in the composition according to the present invention, said population of activated NK cells is obtained by a method wherein, said suitable medium suitable to expand and to activate the NK cells comprised accessory cells and/or at least one suitable NK activated factor.
The present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease.
The present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a cancer wherein this cancer is selected from lymphoma B-CLL and NHL.
The present invention is also directed to a composition according to the present invention, for its use for the treatment or the prevention of a disease in a human subject in need thereof, wherein said therapeutic antibody and said alloreactive NK cells are administered into said subject simultaneously.
The present invention also relates to a method of treatment of a disease in a human subject in need thereof, comprising:
a) administering to said subject alloreactive pooled UCB units NK cells as described herein and,
b) administering to said subject a therapeutic antibody which can be bound by CD16.
In another aspect, the present invention is directed to method of increasing ADCC in a subject receiving therapeutic antibody treatment, wherein said antibody can be bound by CD16 and said method comprises administering to said subject prior to, simultaneously or after the administration of said therapeutic antibody an amount of alloreactive NK cells sufficient to increase ADCC, and wherein said alloreactive NK cells are obtained ), wherein said NK cells population is obtained by a method comprising the steps of:
(a) providing at least n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 < n < 50; and
(b) pooling said at least n UCB units, or fraction thereof containing said NK cells, to produce said population of NK cells.
In a preferred embodiment of the composition or the method of the present invention, the pooled UCBs NK cells population is obtained by the preferred following methods or preferred embodiment as described below.
A method comprising the steps of:
(a) providing at least n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 < n < 50; and
(b) pooling said at least n UCB units, or fraction thereof containing said NK cells, to produce said population of NK cells.
More preferably, 3 < n < 5 and 3 < n < 25 being the most preferred.
In the context of the present invention, by "fraction of UCB unit containing said cells", it is intended to designate a fraction of the UCB unit containing at least the population of cells or part of said population which is desired to be produced.
In a preferred manner, said method further comprising the step of:
(c) depleting the T cells contained in the pool obtained in step (b).
According to another preferred embodiment, said method comprises a step of depleting the T cells contained in each of the n UCB units before the step (b) of pooling.
In a preferred embodiment, in said method, the n UCB units which are pooled in step b) present the same pattern for major HLA class I groups genotype.
In the present description, by "present the same pattern for major HLA class I groups genotype", it is intending to designate UCB units whose group of HLA molecules is recognized by the same inhibitory KIR or preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells. In another preferred embodiment of the method according each UCB present in the pooled n UCB belongs to a HLA group which is recognized by the same inhibitory KIR. As used herein the term "KIR" or "inhibitory KIR" has its general meaning in the art and includes but is not limited to KIR2DL1, KIR2DL2, KIR2DL3, KIR3DL1 and KIR3DL2.
The main/major inhibitory KIRs are KIR2DL1, KIR2DL2, KIR2DL3, KIR3DL1 and KIR3DL2.
KIR2DL1 recognizes HLA-C w4 and related, 'group2' alleles. KIR2DL2 and KIR2DL3 recognize HLA-Cw3 and related, 'group 1 ' alleles. KIR3DL1 is the receptor for HLA-B allotypes with Bw4 motifs. Finally, KIR3DL2 is the receptor for HLA- A3/11.
In another preferred embodiment, said major HLA class I group is selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL1. A preferred source of UCB units are human UCB units.
In a particularly preferred embodiment, said source, is a source of frozen human
UCB.
In a preferred embodiment, the method for producing an expanded population of cells from cells contained in n UCB units, comprising the step of:
(A) producing a population of cells from at least n UCB units, or fraction thereof containing said cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately expanded for said cells before step A) ; and
(B) expanding the desired cells obtained from the population of cells obtained in step (A) in a suitable medium to produce said expanded population of desired cells.
In the method for producing an expanded population of cells from cells contained in n UCB units, the step (B) can be an optionally step in case of each UCB units has been preliminary and separately expanded for said cells before the step b) of pooling in step A).
In another preferred aspect, the method for producing a population of differentiated cells from desired cells contained in n UCB units, comprising the step of:
(A) producing a population of cells from said n UCB units, or fraction thereof containing said desired cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately differentiated for said cells before step A); and
(B) differentiating the desired cells obtained from the preceding step in a suitable medium to produce said population of differentiated cells.
In the method of for producing a population of differentiated cells from cells contained in n UCB units, the step (B) of differentiating can be an optionally step in case of each UCB units has been preliminary and separately differentiated for said cells before the step b) of pooling in step A).
In another preferred aspect, the method for producing a population of cells containing activated natural killer (NK) cells, comprising:
(A) producing a population of cells containing activated NK cells from at least n UCB units, or fraction thereof containing said NK cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately expanded for said NK cells before step A);
(B) activating said NK cells obtained from the step (A) in a suitable medium to produce said population of cells containing activated NK cells;
C) optionally, recovering said activated NK cells from said population.
In another preferred aspect, the method for producing a population of expanded activated NK cells, comprises:
(A) producing a population of cells containing NK cells from at least n UCB units, or fraction thereof containing said NK cells, by the method for producing a population of cells according to the present invention, optionally each UCB units has been preliminary and separately expanded and activated for said NK cells before step A);
(B) expanding and activating said NK cells obtained from the step (A) in a suitable medium to produce said population of expanded activated NK cells; and (C) optionally, recovering said expanded activated NK cells.
In another preferred aspect, the method for producing a population of expanded, optionally, activated NK cells from n UCB units, comprises the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 < n < 100 or 3 < n < 50, more preferably 3 < n < 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) depleting the T cells contained in each UCB unit;
v) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
vi) pooling the n UCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells.
In another preferred aspect, the method of producing a population of expanded and, optionally, activated NK cells from n UCB units, comprises the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 < n < 100 or 3 < n < 50, more preferably 3 < n < 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells; ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation (type Ficoll-Paque PREMIUM®), by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing; iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells; and
vi) optionally, depleting the T cells contained in the pooled NK cells obtained after step v).
In a preferred embodiment, the step vi) of depleting the T cells contained in the pooled NK cells obtained after step v) is not an optionally step and is part of the claimed method.
In another preferred embodiment, the step vi) of depleting the T cells contained in the pooled NK cells obtained after step v) is followed by a step of selecting the NK cells exhibiting the CD56+ biomarker, whether it is still desirable to eliminate remaining non-activated NK cells at this end of the process.
In another preferred aspect, the method for producing a population of expanded and, optionally, activated NK cells from n UCB units, comprises the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 < n < 100 or 3 < n < 50, more preferably 3 < n < 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) optionally, or preferably, depleting the T cells contained in each UCB unit; v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells; and vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably during 1 to 5 weeks, preferably the amplification factor for NK cells after the expanding step(s) is at least 100, preferably, 200, 300 or 500 for an expanding/activation step(s) total duration comprised between 9 and 28 days.
In another preferred aspect, the method for producing a population of expanded, and, optionally, activated NK cells from n UCB units, comprises the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 < n < 100 or 3 < n < 50, more preferably 3 < n < 25, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells; v) optionally, or preferably depleting the T cells contained in the pooled NK cells obtained after step iv; and
vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably during 1 to 5 weeks, preferably the amplification factor for NK cells after the expanding step(s) is at least 100, preferably, 200, 300 or 500 for an expanding/activation step(s) total duration comprised between 9 and 28 days.
All the methods relative to the production of activated/ expanded NK cells are particularly suitable for preparing activated NK cells, from pooled UCB units, with miss expression of one of the following KIRs: KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2. Consequently, in this case, the activated/expanded pooled NK cells as above prepared will be alloreactive toward cells from others which lack the corresponding KIR ligand and, conversely, will be tolerant of cells from another individual who has the same KIR ligands.
Thus, by these methods, it can be produced a collection, or a therapeutic cells bank, of at least 2 different production lots, preferably 3, more preferably 4, of pooled activated/expanded NK-cells obtainable by a method for producing NK cells of the invention, or a collection of at least 2, 3 or 4 fractions of said production lots, and wherein each production lot exhibits a different miss expression of one of the major inhibitory KIRs, preferably selected from the group of KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2 inhibitory KIRs.
Such a collection of at least 2 different production lots, preferably 3, more preferably 4, of pooled activated/expanded NK-cells obtainable by a method for producing pooled activated/expanded NK-cells NK cells contained in the composition of the invention is comprised in the present invention.
In a preferred embodiment said collection, is a collection of storage containers comprises at least 2, 3 or 4 containers that each contains a pooled activated/expanded NK-cells, or fraction thereof, obtainable by a method for producing NK cells of the invention and exhibiting a particular miss expression of one of the major inhibitory KIRs.
According to the present invention, one production lot, or fraction thereof which is needed in quantity for treating one patient, of the claimed collection can be used for transplantation in a patient in need thereof, preferably a patient exhibiting target cells that do not express the specific major KIR ligand which is recognized by the pooled activated/amplified NK cells production lot which will be transplanted.
HLA/KIRs genotyping/phenotyping of UCB/NK cells or patient target cells may be performed by any well-known standards methods.
In a preferred embodiment, said suitable medium suitable to expand and to activate the NK cells comprised accessory cells and/or at least one suitable NK activated factor.
In a preferred embodiment, said accessory cells are selected from the group of:
- mammals cells, preferably human cell, more preferably from HLA-typed collection of cells and, optionally, irradiated cells, particularly gamma-, X- or UV- irradiated cells, gamma- irradiated cells being preferred;
- transformed mammals cells, preferably human cells, wherein in said cell, the expression of one gene encoding for a Killer-Cell Immunoglobulin-like Receptor(s)
(KIR) ligand has been inhibited.
In a preferred embodiment, said cells from HLA-typed collection of cells are from the PLH cell line, preferably selected from the group of ECACC N°. 88052047, IHW number 9047 and HOM-2, ID n°HC107505, IHW number 9005.
In a preferred embodiment, said accessory cell is a transformed mammal cell wherein the expression of one gene encoding for a KIR ligand has been inhibited and which further comprises the inhibition or the reduction of the MHC-I expression and/or the inhibition of the expression of the ERK5 gene. The method for preparing such accessory cells is well known by the skilled person (see WO 2012/146702 published on
November 1, 2012 which is incorporated herein by reference).
The inhibition or reduction of the MHC-I expression is said accessory cell may be performed by any method well known in the art. For example said methods are exemplified in the international patent application publication WO2009141729A2. Typically, said inhibition or reduction of MHC-I expression is performed by using inhibitor of beta-2-microglobulin gene expression.
As indicated above, said accessory cell will be presenting a negative ERK5 phenotype. The term "cell presenting a negative ERK5 phenotvpe" means a cell having a reduction of at least 10%, preferably 25% to 90%, for example 25% to 50% or 50% to 75% in the level of expression or the quantity of ERK5 protein present in the cell, in particular in the mitochondrial fraction, compared with its level of expression.
The inhibition or reduction of the ERK5 gene expression is said cell may be performed by any method well known in the art. For example said methods are exemplified in the international patent application publication WO2009141729A2. Typically, said inhibition or reduction of gene ER 5 expression is performed by using inhibitor of ER 5 gene expression.
In a preferred embodiment, said accessory cells have been immortalized, preferably by Epstein Barr Virus (EBV) transformation.
As a result said accessory cell will constitute a cell line that proliferate indefinitely in culture. Methods for immortalizing cells are well known in the art, particularly using the "Epstein Barr virus" ("EBV") process for immortalize human lymphocyte.
In a preferred embodiment, said suitable medium comprised as suitable NK activated factor interleukin-2 (IL-2), IL-7 and/or IL- 12 and/or IL- 15, or with alpha- or beta- interferon, preferably human recombinant activated factor.
When accessory cells are not used for activating the NK cells, the activation can be carried out using the following possible medium containing NK cells activating factor:
1/ IL-2 5 ng/ml +/- anti-CD3 50 ng/ml + IL-7 10 ng/ml + IL- 12 10 ng/ml, preferably after 7 days;
21 ML- 15 30ng/ml + hIL-21 30 ng/ml (PeproTech) + hydrocortisone 10"6 M > CD34+ 21 days of cultivation thus 21 days of cultivation for the maturation/activation of the NK Cells;
3/ IL-2 500U/ml + beads CD335 (NKp46) and CD2 ;
4/ Mix of cytokines IL-7, SCF, IL-2, IL- 15 (strong concentration) and GM-CSF, G-CSF, IL-6 (low concentration) for NK cells expansion from D14 to D42, in bioreactor,fromCD34+ amplification; DO-9 = low molecular heparin + mix of cytokines (strong concentration) SCF, Flt3L, TPO, IL-7 and (low concentration) GM-CSF, G- CSF, IL-6 (CD34+ amplification); J9- 14 = low molecular heparin + mix of cytokines (strong concentration) SCF, Flt3L, IL-15, IL-7 and GM-CSF, G-CSF, IL-6 ( low concentration ,NK differentiation).
(IL-18 and IFN alpha can be also used).
- Activation and expanding in presence of accessory cells:
1/ IL-2 500U/ml + autologous/allogenic irradiated feeder PBMC (25Gy) ou EBV-LCL (lOOGy), ratio feeder cells:NK 20: 1 (or 10: lfor UCB unit scale-up ) at DO
21 IL-2 200U/ml + mitomycin treated feeder (PBMC+K562 ratios 1 : 1) ratio feeder cells:NK 8: 1
3/ IL-2 500U/ml + allogenic irradiated feeder PBMC (5 000 rad) at DO and D7 ratio feeder cells:total 10: 1 + OKT3 (anti-CD3) 30ng/ml in the culture medium or pre- incubated with feeder cells
4/ IL-2 500U/ml + irradiated feeder Jurkat-KLl (300Gy) at DO
5/ IL-2 500U/ml + autologous irradiated feeder PBMC (2000 rad, + OKT3 lOng/ml at the beginning for stimulate the T lymphocytes of the feeders cells (depleted din the non-irradiated faction)) ratio feeder cells :NK 5: 1 JO
6/ IL-2 + IL- 15 + feeder irradiated feeder K562-mbl5-41BBL (lOOGy)
In another preferred embodiment, in this method for the obtention of the pooled UCBs NK cells population, the step of depleting the T cells is carried out by a method comprising the step of:
- contacting the cells with a depleting antibody; and
- removing the cells detected by said depleting antibody.
The depleting antibody is preferably at least an antibody selected from the group consisting of an anti-CD3, an anti-CD 14, and an anti-CD 20 antibody, preferably an anti-CD3 antibody.
In the population of depleted cells obtained, less than 0.5 % or even less than 0.1 % or even less than 0.001 % are CD3 positive cells.
In another preferred embodiment, in this method, each UCB unit or the pooled n UCB units are red cell-/ erythrocytes depleted, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, by the Hetastarch (Hydroxyethyl Starch; HES) method, by using the PrepaCyte® CB device or by a step of freezing and thawing;
In another preferred embodiment, in this method, each UCB unit or the pooled n UCB units are red cell-depleted by a method comprising the lysis of the red blood cells, particularly by a method including a step of freezing and thawing the cells contained in each of the UCB unit or in the n UCB units pooled cells.
In another preferred embodiment, the UCB units used in step b) or in step i) are thawed UCB units from frozen stored UCB units.
Said pooled UCB units, or fraction thereof containing cells, obtained at the end of the method is preferably stored at a temperature below -70°C, preferably below - 80°C, more preferably in liquid nitrogen.
In another preferred embodiment of this method,
- each UCB unit is preliminary diluted in a suitable culture medium, preferably in a RPMI medium before use; and/or
- after the red-cell/ erythrocytes depletion of each UCB unit or of the pooled n UCB units, the collected cells are resuspended in a suitable culture medium, preferably in a RMPI medium, or in medium type X-VIVO™ (Lonza), AIM-V™ medium (Invitrogen) or CellGro™ (CellGenix), this medium optionally containing fetal bovine serum AB negative (FBS); and/or
- if the collected cells from each red-cell depleted UCB unit or from the pooled red-cell depleted UCB units are stored frozen, the collected cells are resuspended in a suitable culture comprising a white cells cryoprotectant.
More preferably, the ratio between the NK cells and the accessory cells present in the suitable medium for NK cells expansion/activation is comprised between 0.01 and 2, preferably between 0.05 and 1.0, more preferably between 0,1 and 0.5.
More preferably, the accessory cells present in the suitable medium for NK cells expansion/activation and the NK cells to be expanded/activated are HLA-KIR mismatched.
According to another preferred embodiment, the invention relates to a method for the production of a pooled, and activated and/or expanded NK cells according to the present invention, wherein said method further comprising a step of CD56+ NK cells enrichment.
According to another preferred embodiment, it is described a method for the production of at least two distinct pools a population of expanded, optionally, activated NK cells from UCB units, wherein the major HLA class I group recognized by NK cells for each pooled n UCB is different, and wherein each pool of a population of expanded, optionally, activated NK cells from n UCB units is produced by a method for producing a pooled activated and/or expanded NK cells according to the present invention.
More particularly, it is disclosed a method for the production of at least 2, 3, preferably 4 distinct pools a population of expanded, optionally, activated NK cells from UCB units according to the present invention, wherein the major HLA class I group recognized by NK cells for each pooled n UCB is different and selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL2. According to another embodiment, it is also disclosed a population of cells:
-obtained by the method according to the present invention, or
- obtainable by the method according to the present invention and wherein said "obtainable" population of cells contains cells, preferably NK cells originated from at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 2 < n < 100 or 3 < n < 50, more preferably 3 < n < 25, and, preferably, wherein said n UCB units further present the same pattern for major HLA class I groups genotype, preferably wherein the major HLA class I group recognized by NK cells for each pooled n UCB is different and selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL2.
More preferably, said population of cells obtainable by the above method further exhibiting for each pooled n UCB a miss expression of one of the KIRs selected from the group of KIR2DL2 and KIR2DL3, KIR2DL1, KIR3DL1 and KIR3DL2.
The invention also relates to a pharmaceutical composition according to the present invention further comprising a pharmaceutically acceptable carrier.
In the present description, "pharmaceutically acceptable carrier" refers to a compound or a combination of compounds made part of a pharmaceutical composition that do not cause secondary reactions and that, for example, facilitate the administration of the active compounds, increase their lifespan and/or effectiveness in the body, increase their solubility in solution or improve their preservation. Said pharmaceutically acceptable carriers are well known and will be adapted by those persons skilled in the art according to the nature and the mode of administration of the active compounds selected.
According to another aspect, the invention is directed to a product or a composition comprising a collection of storage containers for mammalian cells, preferably for human cells, wherein each of said storage containers contains a fraction of a production lot of a population of cells, preferably pooled UCBs NK cells obtainable or obtained by the above described method and a therapeutic antibody which can be bound by CD 16.
Preferably, said collection of storage containers for mammalian cells according to the present invention contains expanded and/or activated NK cells. Preferably, said collection of storage containers for mammalian cells according to the present invention or said composition according to the present invention, contains at least 107, preferably 2 to 10. 107 or 10 to 100. 107 activated and/or expanded NK cells, depending of the weight of patient to be treated.
Preferably, each of said storage containers collection according to the present invention, or said composition according to the present invention, contains NK cells and being essentially free of CD3+ T cells, preferably less than 0.1 % or less than 0.01 ,.
Preferably, said collection of storage containers for mammalian cells according to the present invention or said composition according to the present invention, contains:
- at least 75 , preferably over 85 or 90 % of NK cells exhibiting the marker the marker CD56+ ; and/or
- at least 75 , preferably over 80 % of NK cells exhibiting CD45RAdim..
According to another aspect, the invention is directed to a storage container of a collection of storage containers according to the present invention, or said composition according to the present invention, for its use for suppressing the proliferation of tumor cells, preferably for the prevention and/or the treatment of cancer or for the treatment of infection.
In a preferred embodiment, said tumor cells or cancer to be treated are selected from the group of hematologic malignancy tumor cells, solid tumor cells or carcinoma cells, preferably leukemia cells, acute T cell leukemia cells, chronic myeloid lymphoma
(CML) cells, acute myelogenous leukemia cells, chronic myelogenous leukemia (CML) cells, multiple myeloma cells, or lung, colon, prostate, glyoblastoma cancer.
According to the present invention, the pooled activated and/or expanded NK cells as prepared according to the invention or said composition according to the present invention, may also useful for the treatment of infectious diseases or dysimmune/autoimmune diseases. In a preferred embodiment, the cells contained in the storage container or the composition according to the present invention, are administered to the subject by a systemic or local route, depending of the disease/pathology to be treated. Preferably, said compounds may be administered systemically by intramuscular, intradermal, intraperitoneal or subcutaneous route, or by oral route. The composition comprising the antibodies according to the invention may be administered in several doses, spread out over time.
Their optimal modes of administration, dosing schedules and galenic forms may be determined according to criteria generally considered in the establishment of a treatment adapted to a patient such as, for example, the age or the weight of the patient, the seriousness of the patient's general health, tolerance to the treatment and side effects noted.
The invention will be further illustrated by the following figures and examples. However, these examples and figures should not be interpreted in any way as limiting the scope of the present invention.
Description of figures:
Figures 1-1 to 1-3 (sub-figures 1, 2 and 3 of Figure 1) is a schema illustrating anexample of a manufacture process of the present invention.
Figures 2 and 3 illustrate the NK proliferation obtained after or without CD3 depletion. Figure 4 illustrates the NK proliferation obtained from pooled CD3-depleted UCB units.
Figure 5 illustrates the NK proliferation obtained from 5 pooled CD3-depleted UCB units.
Figure 6 illustrates the NK proliferation obtained from pooled UCB units without prior CD3-depletion.
Figure 7 illustrates the NK proliferation from pooled UCB units after 9 days of culture with CD3-non depleted UCBs.
Figure 8 illustrates the NK proliferation amplification factor obtained with 2 KIR-HLA matched UCBs and amplified with PLH accessory cells
Figure 9 illustrates the NK proliferation amplification factor obtained with 2 KIR-HLA mismatched UCBs amplified with PLH accessory cells.
Figure 10A-10B illustrates Example 7, first experiment.
Figure 11A-11B illustrates Example 7, second experiment.
Figures 12A-12C: Percentage of patient cells lysis induced by the combination of NK cells + mAb for p45 B lymphoma patient cells (Fig.l2A) and for B-CLL p53 and p46 patient cells (Fig. 12B and 12C).
Figures 13A-13D: Percentage of cell line cells lysis induced by the combination of NK cells + mAb for Daudi cell line (Fig.l3A), Raji cell line (Fig. 12B), Ri-1 cell line (Fig. 12C) and SUDHL4 cell line (Fig. 13D).
Figures 14A-14D: Study of anti-CD20 dose effect (E:T 1/1) on cell lines.
Percentage of cell line cells lysis induced by the Anti-CD20 mAb or the combination of NK cells + mAb for Daudi cell line (Fig.l4A), Raji cell line (Fig. 14B), Ri-1 cell line (Fig. 14C) and SUDHL4 cell line (Fig. 14D).
EXAMPLE 1: Materials and Methods
A) Cells:
PLH (Example 4): no HLA-C1, ECACC bank n°88052047, IHW number 9047
This cell line was obtained by EBV immortalization of B lymphocytes coming from a Scandinavian woman. This cell is completely HLA genotyped and have the particularity to express HLA Class I alleles from C group 2, A3/A11 and Bw4 types but not from C group 1 (complete informations on IMGT/HLA database).
This cell line is used as accessory cell for NK amplification/activation protocol because it allows to choose a specific HLA mismatch between accessory cell and UCBs (expressing HLA C group 1, and potentially the associated inhibitory receptor
KIR2DL2/3). Being transformed by EBV infection increases its NK activation ability because of membranary expression of some viral induced ligands for NK activating receptors. HOM-2 (Example 4): no HLA-C2, ID n°HC107505, IHW number 9005
This cell line was obtained by EBV immortalization of B lymphocytes coming from a Canadian/North American woman. This cell is completely HLA genotyped and have the particularity to express HLA Class I alleles from C group 1, A3/A11 and Bw4 types but not from C group 2 (complete informations on EVIGT/HLA database).
This cell line is used as accessory cell for NK amplification/activation protocol because it allows to choose a specific HLA mismatch between accessory cell and UCBs (expressing HLA C group 2, and potentially the associated inhibitory receptor KIR2DL1). Being transformed by EBV infection increases its NK activation ability because of membrane expression of some viral induced ligands for NK activating receptors. B) Media, buffers and cytokines:
1/Density gradient cell separation medium of Ficoll and sodium diatrizoate used for the separation of lymphocytes: Histopaque- 1077 from Sigma Aldrich, Saint Louis, MO, USA
2/Kit for counting cells and looking at their viability with the Muse machine, labelling the cells with 7AAD and a fluorescent DNA probe: count and viability kit from Millipore, Darmstadt, Germany
3/Cellular culture medium: RPMI 1640 Glutamax from Invitrogen, Carlsbad, CA, USA, purchased from France distributor Thermo Fisher Scientific
4/Nutrient source in cellular culture medium: Foetal Bovine Serum from Invitrogen, Carlsbad, CA, USA, purchased from France distributor Thermo Fisher Scientific
5/Organic solvent for cells freezing: dimethyl sulfoxyde, DMSO from B. Braun, Melsungen, Germany
6/Buffer for flow cytometry labelling: PBS from Invitrogen, Carlsbad, CA, USA, purchased from France distributor Thermo Fisher Scientific
7/Cytokine for NK amplification/activation: recombinant human rhIL-2 from ebioscience, San Diego, CA, USA
8/Cytokine for NK amplification/activation: recombinant human rh-IL15 from Miltenyi, Bergisch Gladbach, Germany EXAMPLE 2: Example of manufacturing process
Process details: see Figures 1-1 to 1-3
UCBs were processed by ficoll UCB mononuclear cells isolation before first freezing.
CD3 depletions were done with a manual magnetic depletion kit.
Pooled UCBs present the same pattern for major HLA class I groups genotype (each HLA group is recognized by a major inhibitory KIR by NK cells): HLA A3/A11, recognized by KIR3DL2; HLA Bw4, recognized by KIR3DL1; HLA C group 1, recognized by KIR2DL2/3; HLA C group 2 recognized by KIR2DL1.
Pooled UCBs are activated with an accessory cell missing one of the HLA recognized by the expressed pooled UCBs iKIRs.
NK cells were amplified for 20-24 days.
Cytokines used are IL-2 (lOOIU/ml) and IL-15 (5ng/ml). These concentrations can be modified to obtain similar results.
Accessory cells are EBV-immortalized cell lines (cells expressing virus induced activating ligands) with specific HLA genotypes (one major HLA class I group missing).
Accessory cells can be irradiated by different ways with different irradiation doses (here we mainly used 20 seconds UV irradiation, but also 105Gy gamma irradiation for the last experiment, that showed better amplification results).
Irradiated accessory cells can be used with or without prior cryopreservation: freshly irradiated cells or as irradiated cryopreserved cells (irradiation just before freezing).
- For the 3 last experiments, irradiated accessory cells were added to the
UCB cells at NK:accessory cell ratio 1:4, each 3-4 days (days 0;4;8;12;+/-15;+/-18). Some results (previous and other not shown results) were obtained using ratio 1:2, or ratio total cells accessory cells from 1: 1 to 1:3, with addition frequencies from 3 days to 7 days. This parameter can be changed, still obtaining similar amplification/activation results.
In the experiments shown we didn't perform the CD56+ selection at the end of the process because NK cells derived from pooled CD3-depleted UCBs represented already more than 90% of alive cells at the end of the process. The CD56 selection step is not essential, but will probably improve NK purity and be preferable (and potentially totally required) for a pharmaceutical product. Some steps of the process can be changed:
UCBs will be processed differently before first freezing, using a GMP- compliant method such as Hetastarch™ or PrepaCyte CB™ device (or other existing and clinically accepted method).
Even if current preclinical and clinical knowledge show that a iKIR-HLA mismatch gives better results than iKIR-HLA match, it is still possible that in our case iKIR-HLA has different influence in clinical outcome. So for the moment, the literature knowledge-based development should be with a process using NK/accessory cell mismatch and NK/patient same mismatch. Future preclinical and clinical data could change this parameter if unnecessary.
- NK amplification culture duration can be optimized: from 14 to 28 days.
IL-2 and IL-15 concentrations can be optimized.
The CD3-depletion will be done with an automatic clinically accepted device such as cliniMACS.
The CD3-depletion can also be done just after erythrocyte elimination and volume reduction (maybe better results in term of NK recovery).
One of the results demonstrates that in some undefined cases, the CD3- depletion is not necessary for UCB pooled NK cells good amplification/activation.
To obtain an important quantity of activated multi-donors -derived NK cells characterized in a unique pharmaceutically defined lot, the preferentially CD3- depleted UCB units can be pooled at various moments of the process: before amplification culture, during amplification culture, or at the end of the amplification culture.
EXAMPLE 3: OBJECTIVES
1. First experiment
Because it is known that T lymphocytes from different donors will kill each other by HLA differences recognition, and because NK cells need activator signal to be cytotoxic, we asked whether it is possible to pool CD3-depleted UCBs expressing the same major HLA groups (depending their recognition by inhibitory KIR's) but not the same HLA alleles. Total mononuclear cells and CD3-depleted mononuclear cells from 3 UCBs were pooled to verify if CD3-depletion was essential.
2. Second experiment
Because we want to produce 4 class of NK cells presenting an iKIR-HLA mismatch for each major iKIR/HLA pair, we needed to investigate if success of pooling UCBs was only due to the first particular HLA genotyping used previously or could be reproduced with another HLA genotyping of UCBs: We asked whether another accessory cell line using another iKIR-HLA mismatch will allow NK amplification/activation from a pool of 3 CD3-depleted UCBs expressing the same HLA groups.
3. Third experiment
Because to treat around 100 patients we will need to pool 10 UCBs, we asked whether a pool of 5 UCBs (half) expressing the same HLA groups allow the same NK amplification/activation.
EXAMPLE 4: Experiments carried out
1. First experiment
UCB mononuclear cells obtained by Ficoll separation were cryopreserved, then thawed and CD3-depleted using a stem cell kit for a part. Three CD3-depleted or total UCBs with same the major HLA class 1 groups A3/A11+, Bw4+,C1+,C2+ genotype were pooled and cultured for 21-25 days with IL-2, IL-15 and irradiated accessory cells PLH (A3/Al l+,Bw4+,Cl-,C2+ genotype) added each 4 days.
2. Second experiment
UCB mononuclear cells obtained by Ficoll separation were cryopreserved, then thawed and CD3-depleted using a stem cell kit. Three CD3-depleted UCBs with same the major HLA class 1 groups A3/Al l-,Bw4+,Cl-,C2+ genotype were pooled and cultured for 21-25 days with IL-2, IL-15 and irradiated accessory cells HOM-2
(A3/Al l+,Bw4+,Cl+,C2- genotype) added each 4 days.
3. Third experiment UCB mononuclear cells obtained by Ficoll separation were cryopreserved, then thawed and CD3-depleted using a stem cell kit. Five CD3-depleted UCBs with same the major HLA class 1 groups A3/Al l-,Bw4+,Cl+,C2- genotype were pooled and cultured for 21 days with IL-2, IL-15 and irradiated accessory cells PLH (A3/Al l+,Bw4+,Cl- ,C2+ genotype) added each 4 days.
4. Evaluated parameters
Alive NK cells were regularly counted using the MUSE Millipore system and flow cytometry characterization of cellular composition in the culture.
Expression of activating markers of NK cells was regularly evaluated by flow cytometry (CD 16 for potent synergistic effect with monoclonal antibody therapies; CD69 as common activating receptor).
At day 20 of culture, cytotoxicity was evaluated against well-known K562 target cells, and tumoral cells for experiment 2 and 3 (2h incubation with NK:K562 ratio 3: 1, NK:purified B lymphoma cells ratio 3: 1, NK:AML cells (in total PBMC sample of the patient) ratio 10: 1).
EXAMPLE 5: Results
1. First experiment (see figures 2 and 3)
UCB 1 : HLA Al l :01/A29:02, B35:01/B44:02, C04:01/C16/01 > HLA A3/A11+, Bw4+, C1+, C2+
UCB2: HLA Al l :01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2+
UCB3: HLA A2/A3, B 18/B51, C5/C14 > HLA A3/A11+, Bw4+, C1+, C2+ NK proliferation from isolated UCBs show better results after CD3-depletion because T lymphocytes are in competition with NK cells for proliferation with the cytokines used (and CD8-T lymphocytes directed against EBV antigen are also stimulated by accessory cells).
NK from pooled CD3-depleted UCBs proliferate similarly than from isolated UCBs, but if UCBs are not CD3-depleted, T lymphocytes from the different donors are cytotoxic for the other one and NK cells cannot proliferate. Table 1:
NK amplification factor is relatively low in this experiment due to technical issue.
Activating receptors are well expressed, and cytotoxicity against common target K562 of cultured NK cells is highly better than with un-activated NK cells.
This experiment showed that pooling UCB with same major HLA groups genotyping for NK amplification is feasible but require prior CD3-depletion. Amplified NK cells are well-activated.
2. Second experiment (see Figure 4)
UCB 1 : HLA AO 1/02, B27:05/B40:02/C02:02/C15:02 > HLA A3/A11-, Bw4+, C1-, C2+
UCB2: HLA A2/A31, B50/B51, C06:02/15:02 > HLA A3/A11-, Bw4+, C1-, C2+ UCB 3: HLA A23/A24, B44/B44, C4/C5 > HLA A3/A11-, Bw4+, C1-, C2+
NK proliferation from pooled CD3-depleted UCBs with this new genotype is similar to NK proliferation with isolated CD3-depleted UCBs. Table 2:
NK amplification factor is higher in this experiment (no technical issue), but can still be improved by protocol optimization specifically for the new accessory cell line.
Activating receptors are very well expressed. Cytotoxicity against common target K562 of cultured NK cells is highly better than with unactivated NK cells, and we observe a significant cytotoxicity against B lymphoma tumoral cells with a 2 hours incubation.
Pooling CD3-depleted UCBs with another major HLA groups genotype, and amplifiying NK cells with another iKIR-HLA mismatch and another accessory cell line is feasible. Amplified NK cells are well-activated.
3. Third experiment (see Figure 5)
UCBs : HLA A3/A11-, Bw4+, C1+, C2- Table 3:
NK proliferation from 5 pooled CD3-depleted UCBs is good.
NK amplification factor is higher in this experiment.
Activating receptors are very well expressed. Cytotoxicity against common target K562 of cultured NK cells is highly better than with unactivated NK cells, and we observe a small specific cytotoxicity against AML tumoral cells with a 2 hour incubation (but we could'nt observe cytotoxicity after 20h because at this time patient cells died because of thawing).
Pooling 5 CD3-depleted UCBs and amplifying NK cells with an important amplification factor is feasible with our manufacturing process. Amplified NK cells are well-activated. 4. Complementary results
Experiment showing good amplification of NK cells from pooled UCBs without prior CD3-depletion (no reproducibility assay): (see Figure 6)
3 iKIR-HLA mismatch UCBs amplified with PLH:
UCB 1 : HLA A2:01/A68:01 ; B38:01/B57:01 ; C6:02/C12:03 > C1+, C2+, A3/A11-, Bw4+
UCB 2: HLA Al :01/A2:01 ; B52:01/B57:01 ; C6:02/C12:02 > C1+, C2+, A3/A11-, Bw4+
UCB 3: HLA A02/02; B 15:09/B50:02; C06/C07 > C1+, C2+, A3/A11-, Bw4- NK amplification can be similar in isolated or pooled UCBs without prior CD3- depletion.
Experiments showing possibility of pooling after 9 days culture (with CD3-non depleted UCBs):
1/ same previous experiment (see Figure 7)
Table 4:
It is possible to pool 9 days activated NK cells (here without prior CD3- depletion) keeping a significant but lower NK amplification.
2/ Experiment with 2 iKIR-HLA matched UCBs amplified with PLH: (see Figure 8)
UCB 1: HLA Al l:01/A29:02, B35:01/B44:02, C04:01/C16/01 > HLA A3/A11+, Bw4+, C1+, C2+
UCB2: HLA Al l:01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2+
When NK didn't amplify properly in CD3-non depleted, pooling UCBs after 9 days amplification (increasing NK and NK activation status, but still with high T lymphocytes %) seemed to overcome the problem. They showed an in vitro similar good cytotoxicity against B lymphoma tumoral cells (overnight, ratio E:T 1: 1).
3/ Experiment with 2 iKIR-HLA mismatched UCBs amplified with PLH: (see Figure 9)
UCB1: HLA A02:02/30:01, B42:01/B53:01, C04:01/17:01 > HLA A3/A11-, Bw4+, C1-, C2+
UCB2: HLA Al l:01/A23:01, B35:02/B49:01, C04:01/07:01 > HLA A3/A11+, Bw4+, C1+, C2 Table 5:
NK cells from CD3-non depleted iKIR-HLA mismatched pooled UCBs showed a lower amplification factor, and pooling these UCBs after 9 days amplification gave better NK amplification. They showed an in vitro similar good cytotoxicity against B lymphoma tumoral cells (overnight, ratio E:T 1: 1). EXAMPLE 6: PERSPECTIVES
1. Process optimization
Preferably, the manufacturing process of pooled activated/expanded NK cells according to the present invention will be adapted to the pharmaceutical regulatory obligations, and every step of the process adapted for the best quality guarantee.
- First, and for example, acceptance criteria of UCB units must be set, such as more than 1.4 or 1.6 106 total nucleated cells (currently 1.85 106 total nucleated cells for our local UCB bank), with potentially a minimal threshold for the NK percentage such as 7% (3-15% NK generally observed in UCB total nucleated cells).
- The "Ficoll" method used in the above examples for UCB mononuclear cells (UCBMC) isolation can be easily
replaced by well-adapted standard and well-known method for clinical application, and pharmaceutical conditions, for example using a closed sterile single use system with bags, using adapted procedures such as HES 6% and centrifugations erythrocytes elimination and volume reduction, or Prepacyte CB isolation system. These systems certainly improve the total nucleted cell recovery in the first step.
- Preferably, CD3-depletion of UCBMCs can be better adapted to regulatory compliances and/ or GMP process for pharmaceutical uses, for example with an adapted clinically upgradable material such as CliniMACS™, and by determining the best step time for CD3-depletion whether it is needed, before or after first cryopreservation step for the best cell recovery and the best CD3-depletion quality.
- Preferably, the freezing, cryopreservation and thawing procedures for UCBMC can be improved using authorized procedures for clinical applications after validation of the manufacturing process. Adapted material for bag closed system can be used and cryopreservation conditions (media, cell concentration) can be easily optimized by the skilled person for the method of the present invention. These optimization steps only should certainly improve the total cell recovery after thawing. In the same time, the acceptance criteria for each thawed UCBMCs to go further into the manufacturing process according to pharmaceutical guidelines should be set.
- Preferably, HLA-genotyping and inhibitory KIR expression evaluation procedures should be validated to select the different UCB units allowed to be pooled for the amplification/activation step: selection criteria should be set for each lot.
- Preferably, GMP compliant upgradable accessory cells, whether they will be included in the method of the invention, with a final screening on NK amplification:activation for clones selection. Final accessory cells must be well- characterized for use in a therapeutic agent production procedure. This optimization step could also improve NK amplification/activation results.
- Preferably, irradiation procedure will be optimized and validated for the best amplification/activation results with clinically adapted quality parameters, and acceptance criteria of cryopreserved irradiated accessory cells lots will be set, including unproliferation evaluation, cells viability, EBV inactivation ...etc.
- Irradiated accessory cells exact addition procedure will be optimized for the final clones used in the process including accessory cells.
- Preferably, a dynamic culture closed system in bioreactors will be used for amplification/activation step with at least 5, preferably 10 pooled UCB units, such as the Wave system™ (GE Healthcare) already tested for NK culture.
- Preferably, culture medium used for the amplification/activation step, using animal serum-free media such as X-VIVO™ media from Lonza, CellGro SCGM™ from Cellgenix or AIM V™ from Invitrogen (already tested for NK cultures) can be used.
- Preferably, CD56 positive selection of amplified/activated NK cells using an adapted clinically upgradable material such as CliniMACS™, will be used. 2. Pharmaceutical development: final product characterization and acceptance criteria
Preferably, a step of acceptance criteria of final amplified/activated products must will be included in the process, including product identification steps (genetic stability, chimerism, phenotype) and a standard potency evaluation procedure.
- Preferably, the genetic stability of NK cells before and after the process of the present invention will be be checked, looking at their karyotype ( for example by G- banded karyotyping or cytoscanHD microarray methods wel-known by the sfilled person), and the chimerism of the final pooled NK cells from the different donors must be defined (for example by standard multiplex PCR STR methods).
- Preferably and to better identify and characterize the final product and to define acceptance criteria, the expression of more NK phenotypical markers (NKG2D, NKG2C, CD94, NKp44, NKp30, NKp46, CD158...) will be evaluated (for example by flow cytometry).
- Preferably, each product lot will be tested with a validated cytotoxicity assay against commonly used well-known target cells
- Preferably, the absence of contaminations such as bacteria, fungi, mycoplasma and viruses (particularly EBV) must be verified during or after the final step of the process, as the absence of endotoxins and cytokines used during the manufacturing process.
EXAMPLE 7: Pooled UCBs NK cells cytotoxicity associated with anti-CD20 Antibodies
Material and Methods:
UCBs:
HLA A3/A11+, HLA Bw4+, HLA Cgl+ et HLA Cg2- ;
Activated in presence of PLH (HLA Cgl-) and thus, no inhibition via their KIR2DL2 et KIR2DL3
Alloreactivity of the NK HLA Cgl+ KIR2DL2/KIR2DL3+ against the tumoral cells
(HLA Cgl-) UCBs treatment:
Production of a population of expanded and activated NK cells from 5 UCB units:
From the 5 UCB units exhibiting preferably the same pattern for major HLA class I groups genotype
Erythrocytes-depleting each UCB unit by density gradient separation, by Ficoll-Paque® density gradient separation;
Optionally (see second experiement), the population of cells obtained is frozen, kept in liquid nitrogen and thawed before their use
The 5 Ficoll/depleted nUCB units cells obtained in the preceding step are pooled.
The pooled NK cells obtained are thus expanding and activating by contacting the NK cells contained in the pool, in a suitable medium to produce said population of pooled expanded and activated NK cells as described before, for an expanding/activation step(s) total duration comprised between 9 and 28 days
Irradiated PLH at DO, D5, D8, D12;
Culture medium : RPMI FBS 10% IL-2 100 IU/ml 1-15 5ng/ml;
Amplification factor at D21 : 256.6 ; 99,5% of NK cells, 100% CD69+, 84,6% CD16+ (directly used for cytotoxicity test).
After freezing/Thawing, we obtained 44,9% of CD 16+.
Patient p45: lymphoma B tumor sample (97% tumoral cells) ;
Patient p46 : B-cell chronic lymphocytic leukemia (B-CLL) (91% tumoral cells)
For these two cases, the patient cells sample are thawing and, l-2h after thawing, are used in cytotoxicity assay
50,000 target cells/microwell, 200μ1 in final (96-well microplate conical bottom), RPMI medium FBS (Foetal bovine serum) 10%, IL-2 100 IU/ml, +/- rituximab
ΙΟμ^πύ, incubation at 37°C, 5%C02. First experiment (see figures 10A-10B)
Fresh (not freezed- thawed) pooled UCBs NK cells are used (21 days after their production);
Overnight (18h) incubation
Ratio NK cells / tumoral cells as indicated in the figures 6A-6B.
Results:
No cytotoxicity is observed on non NK (CD56-) and non B (CD 19-) cells even when the ratio used is the strongest one;
In presence of rituximab, the pooled UCBs NK cells mediate Antibody-Dependent Cell- mediated Cytotoxicity on cellules CD20+tumoral cells.
2nd Experiment (see figures 11 A- 1 IB)
Same Lot of pooled UCB units NK cells as the first experiment but freezed at D21 et thawed at the day of cytotoxicity test ;
Incubation 24h with the ratio indicated in the figures 11A- 11B (we can note that the ratios at the end of the cytotoxicity test are lower than at the beginning (death of part of the NK cells after 24h following the thawing (6 in place of 10 and 3,5-4 in place of 5). Results:
In presence of rituximab, the pooled UCBs NK cells mediate Antibody-Dependent Cell- mediated Cytotoxicity on cellules CD20+tumoral cells.
EXAMPLE 8: Anti CD20 TG20 act as a synergic manner to increase ADCC involved by NK cells
A) Chimeric Anti-CD20 antibody TG20
In order to increase NK cells infusion treatment efficiency, the therapy will be combined with the use of anti CD20 monoclonal antibody: TG20 (LFB S.A., Les Ulis, France, TG Therapeutics Inc., New York, N.Y.) to decrease progression or cure hematological cancers such as non-Hodgkin B-cell lymphoma or B-Cell chronic lymphocytic leukemia.
TG20 is also called TG-20, Ublituximab, LFB-R603, TG-1101 or TGTX-1 101. For more details of the structure of the chimeric anti-CD20 antibody TG20, see the patent application WO2012/175874 (published on December 27, 2012).
According to the National Cancer Institute drug dictionary, TG20 (Ublituximab) is a chimeric recombinant IgGl monoclonal antibody directed against human CD20 with potential antineoplastic activity. Ublituximab specifically binds to the B cell- specific cell surface antigen CD20, thereby potentially inducing a B cell-directed complement dependent cytotoxicity (CDC) and antibody-dependent cell-mediated cytotoxicity (ADCC) against CD20-expressing B cells, leading to B cell apoptosis. CD20 is a non- glycosylated cell surface phosphoprotein that is exclusively expressed on B cells during most stages of B cell development and is often overexpressed in B-cell malignancies. Ublituximab has a specific glycosylation profile, with a low fucose content, that may enhance its ADCC response against malignant B cells. NK cells are able to interact with cytotoxic monoclonal antibodies and lyse cells which are recognized by these monoclonal antibodies. This property is well known as "antibody dependent cellular cytotoxicity" (ADCC).
This example demonstrates in vitro on clinical samples from patients that anti CD20 TG20 act as a synergic manner to increase ADCC involved by expansed and activated NK cells from pooled umbilical cord blood.
NK cells are produced regarding good manufacturing process (GMP) and characterized in order to have 99% of purity at day 21.
ADCC assays were performed on patient samples and also on 5 cell lines. B) Antibody Dependent Cellular Cytotoxicity Assay
a) On patient samples
Patient samples are coming from CHU, Montpellier, France.
Ratio E:T « Effector (NK cells) : Target (= patient cells) » are 5 : 1, 15 : 1
As 50 000 target cells for 250 000 or 750 000 NK cells
Monoclonal Antibody (mAb) concentration: 10 μg/ml
TG20) is compared to gold standard Rituximab (Genentech, Roche) TG20 and Rituximab are pre-incubated 15 min at room temperature.
After NK addition, incubate 24h at 37 °C before flow cytometry analysis
Results: (see Figures 12A, 12B and 12C)
At this time, we have tested one B-lymphoma (p45) and two B-CLL (B-cell Chronic Lymphocytic Leukemia) (p46, p53) patients.
Variation of E:T ratio observed between assays is technically experience-dependent. Each sample of patient respond as an independent manner to the NK treatment alone. We observed for low E:T ratio 49%, 23% or 37% of lysis induced by NK cells alone for respectively p45, p46 and p53 patients. With a higher E:T ratio lysis induced by NK cells alone increased as 58% for p45 and 39% for p46.
MAb (TG20 or Rituximab) treatment alone is poorly efficient.
Association of NK cells and mAb increase dramatically percentage of target lysis in all cases. Compare to treatment of NK cells alone, we observe an increase of about 40% with the combination of NK cells + mAb in patient p45, an increase of 145 % for low E:T ratio and 50% for high E:T ratio in patient p46 and an increase of 29% for NK+TG20 ΙΟμ^πύ and 18% for NK+ Rituximab ΙΟμ^πύ in patient p53.
For instance we do not observe any significant difference between efficiency of TG20 and Rituximab. Moreover each response to combination of NK+mAb is patient dependent. b) On cell lines
Cell lines:
Daudi (Burkitt lymphoma, high CD20), Raji (Burkitt lymphoma, low CD20), SUDHL4 (DL-BCL GC (Diffuse Large B Cell Lymphoma Germinal Center)), Rl- 1 (DL-BCL
ABC (Activated B-Cell)) and HL60 (AML (Acute Myeloid Leukaemia)).
Ratio E:T « Effector (NK cells) : Target (= cell line cells) » are 1 : 1, 2: 1 and 3: 1
As 50 000 target cells for 50 000, 100 000 or 150 000 NK cells
Monoclonal Antibody (mAb) concentration: 0.1 ; 1 ; 5 et 10 μg/ml
TG20 is compared to gold standard Rituximab (Genentech, Roche)
TG20 and Rituximab are pre-incubated 15 min at room temperature. After NK addition, incubate 4h at 37 °C before flow cytometry analysis
- Results: ADCC and synergic action of mAb and NK cells on cell lines (see Figures 13A, 13B and 13C) and anti-CD20 dose effect (ratio E:T: 1/1) ((see Figures 14A, 14B, 13C and 14C)
1 : 1 E:T ratio is more appropriate to study ADCC and synergic action of mAb and NK cells . To evaluate dose effect of mAb we should start at 5μg/ml of mAb as a minimal dose.
On AML HL60 cell line we do not observe a real synergic action of mAb and NK which is a normal result as HL60 cells do not exhibit CD20 on surface (data not shown). At this time, TG20 seems to be as efficient as Rituximab. Furthermore, we observe on SUDHL4 cell line better results of synergic action between TG20-NK cells than Rituximab-NK cells.
Binding of TG20 and Rituximab were also tested on Daudi and Raji cell lines and no significate results were observed (data not shown). On Daudi cells: TG20 EC50=75.6 ng/ml; Rituximab EC50=105ng/ml. On Raji cells: TG20 EC50=229 ng/ml; Rituximab EC50=230ng/ml. (EC50 is concentration of mAb to obtain 50% of binding).
Inhibition of CD20 after mAb binding was also analyzed on Daudi and Raji cells (data not shown). On Daudi cells we observed: TG20 EC50= 4 μg/ml; Rituximab EC50= 3,4 μg/ml. On Raji cells we observed: TG20 EC50= 5 μg/ml; Rituximab EC50=3,7 μg/ml. The differences observed for both mAb on each cell line are not significant. EC50 is concentration of mAb to obtain 50% of CD20 inhibition.
Finally, we have performed complement dependent cytotoxicity on the 5 cell lines and we did not observe any difference between lysis induced by complement with TG20 or Rituximab (data not shown).

Claims

1. A pharmaceutical composition comprising a therapeutic antibody, which can be bound by a natural killer cells (NK cells) Fc receptor, and a population of alloreactive natural killer cells (NK cells), wherein said cells population is obtained by a method comprising the steps of:
(a) providing at least n umbilical cord blood units (UCB units), or fraction thereof containing said NK cells, with n > 2, preferably 3 < n < 50; and
(b) pooling said at least n UCB units, or fraction thereof containing said NK cells, to produce said population of NK cells.
2. The composition of claim 1 containing said therapeutic antibody and said NK cells population as a combined preparation for simultaneous, separate or sequential use.
3. The composition according to claim 1 or 2, wherein said therapeutic antibody is a monoclonal antibody or a fragment thereof capable to bind said NK cells Fc receptor, and wherein said monoclonal antibody, or fragment thereof, comprises at least the 6 complement determining regions (CDRs) of the heavy and the light chain of said antibody specific of the antigen of the subject cell which is desired to target.
4. The composition of anyone of claims 1 to 3, wherein said NK cells Fc receptor is the FcyRIIIa receptor (CD 16).
5. The composition of anyone of claims 1 to 4, wherein said therapeutic antibody is an antibody whose mechanisms include NK cell-mediated ADCC, preferably selecting from the group consisting of an anti-CD20, an anti-Her2/neu, an anti- epidermal growth factor receptor (EGFR), and an anti-ganglioside GD2 antibody (anti- GD2).
6. The composition of anyone of claims 1 to 5, wherein said therapeutic antibody is a human, humanized or chimeric antibody or a fragment thereof.
7. The composition according to claim 6, wherein said therapeutic antibody is selected from the group of:
• Anti-CD20
Rituximab, Ublituximab, Obinutuzumab, Ocaratuzumab, Ocrelizumab, Odulimomab , Ofatumumab, Tositumomab ; Veltuzumab, FBTA05 or Ibritumomab tiuxetan;
• Anti-HER2/Neu
Trastuzumab, Ertumaxomab or Pertuzumab;
• Anti-EGFR
Cetuximab, Futuximab, Imgatuzumab, Matuzumab, Necitumumab or Nimotuzumab; · Anti-GD2
Dinutuximab; and
• Anti-CD52
Alemtuzumab.
8. The composition of anyone of claims 1 to 7, wherein
i) said cells population of NK cells is obtained by a method further comprising the step of: (c) depleting the T cells contained in the pool obtained in step (b); or
ii) said method comprising the step of depleting the T cells contained in each of the n UCB units before the step (b) of pooling.
9. The composition of anyone of claims 1 to 8, wherein said n UCB units when pooled present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells.
10. The composition of anyone of claims 1 to 9, wherein said major HLA class I group is selected from the group consisting of HLA A3/A11 which is recognized by KIR3DL2, HLA Bw4, which recognized by KIR3DL1, HLA C group 1 which is recognized by KIR2DL2/3 and HLA C group 2 which is recognized by KIR2DL1.
11. The composition of anyone of claims 1 to 10, wherein said population of NK cells is obtained by a method comprising further a method of expanding said population of NK cells from cells contained in said n UCB units, and wherein,
- optionally each UCB units has been preliminary and separately expanded for said NK cells before the step of pooling said at least n UCB units ; and/or
- expanding the desired cells obtained from the population of cells obtained after the step of pooling said at least n UCB units in a suitable medium to produce said expanded population of desired cells.
12. The composition of anyone of claims 1 to 11 wherein said population of NK cells is an activated population of NK cells, obtained by a method further comprising a step of activating said population of NK cells.
13. The composition of claim 11 or 12, wherein said population of NK cells is an activated population of NK cells wherein:
- optionally each UCB units has been preliminary and separately expanded and activated for said NK cells before the step of pooling said at least n UCB units ; and/or
- activating the desired cells obtained from the population of cells obtained after the step of pooling said at least n UCB units in a suitable medium to produce said activated population of desired cells.
14. The composition of anyone of claims 1 to 13, wherein said population of NK cells is obtained by a method selected in the group of methods consisting of:
A) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) depleting the T cells contained in each UCB unit;
v) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days; and
vi) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells.
B) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) for each of the UCB units obtained in the preceding step, separately expand and, optionally, activate the NK cells contained in one UCB unit by contacting the NK cells contained in the UCB unit, or fraction thereof containing NK cells, in a suitable medium to produce said expanded population and, optionally, activated NK cells for each UCB unit, preferably during 3 to 28 days;
v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled expanded and, optionally, activated NK cells; and
vi) depleting the T cells contained in the pooled NK cells obtained after step v).
C) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, preferably 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) depleting the T cells contained in each UCB unit;
v) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells; and vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably the amplification factor for NK cells after the expanding step(s) is at least 100 or 300 for an expanding/activation step(s) total duration comprised between 9 and 28 days. D) the method comprising the step of:
i) providing at least n UCB units, or fraction thereof containing NK cells, with n > 2, 3 < n < 50, and wherein said at least n UCB units present the same pattern for major HLA class I groups genotype, preferably wherein each HLA group present in the pooled n UCB is recognized by the same major inhibitory KIR by NK cells;
ii) optionally red cell-/erythrocytes-depleting each UCB unit, preferably by density gradient separation, more preferably by Ficoll-Paque® density gradient separation, or by a step of freezing and thawing;
iii) optionally, the population of cells obtained in step i) or ii) is frozen, kept in liquid nitrogen and thawed before step iv);
iv) pooling the nUCB units cells obtained in the preceding step UCB units, or fraction thereof containing NK cells, to produce a population of pooled NK cells;
v) depleting the T cells contained in the pooled NK cells obtained after step iv; and
vi) expanding and, optionally, activating the pooled NK cells obtained in the preceding step by contacting the NK cells contained in the pool, or fraction thereof containing NK cells, in a suitable medium to produce said population of pooled expanded and, optionally, activated NK cells, preferably the amplification factor for NK cells after the expanding step(s) is at least 100 or 300 for an expanding/activation step(s) total duration comprised between 9 and 28 days
15. The composition of anyone of claims 12 to 14 wherein said population of NK cells is obtained by a method wherein, said suitable medium suitable to expand and to activate the NK cells comprised accessory cells and/or at least one suitable NK activated factor.
16. The composition of anyone of claims 1 to 15 for its for its use for the treatment or the prevention of a disease in a human subject in need thereof, preferably wherein said disease is a cancer, infectious or immune disease.
EP16774876.3A 2015-09-11 2016-09-12 Pooled nk cells from umbilical cord blood associated with antibodies and their uses for the treatment of disease Pending EP3347454A1 (en)

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