CN111973271A - Preoperative ablation region simulation method and device for tumor thermal ablation - Google Patents
Preoperative ablation region simulation method and device for tumor thermal ablation Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及医学图像处理的技术领域,尤其涉及一种针对肿瘤热消融的术前消融区域模拟方法,以及针对肿瘤热消融的术前消融区域模拟装置,主要适用于基于深度学习引导的消融手术。The invention relates to the technical field of medical image processing, in particular to a preoperative ablation area simulation method for tumor thermal ablation, and a preoperative ablation area simulation device for tumor thermal ablation, which are mainly suitable for ablation operations based on deep learning guidance.
背景技术Background technique
微波消融手术过程中,医生将消融针经皮穿刺置入组织病灶位置处,消融针前极处发射微波,周围病灶组织受到微波辐射后温度上升,当周围病灶组织的热损伤超过一定限制,其蛋白质失活,产生消融区域,从而实现肿瘤的治疗。为了给医生提供不同病人对应的最佳消融方法,实现个体化适形消融,需要在术前规划阶段,根据术前影像提供的肿瘤以及重要组织血管的位置,设计入针的位置和方向,并在此基础上,模拟生成消融区域的范围。通过比较消融区域与肿瘤的位置大小关系,调整入针的位置和方向,从而最终确定适用于该病人的最佳消融方案,并指导后续术中真实消融,提高整体手术效率。因此,在术前规划中,根据消融针摆放位置方向,对消融区域大小形状的预测是设计最佳消融方案的基础。During the microwave ablation procedure, the doctor inserts the ablation needle percutaneously into the position of the tissue lesion, and the anterior pole of the ablation needle emits microwaves, and the temperature of the surrounding lesion tissue rises after being irradiated by the microwave. The protein is inactivated, creating a region of ablation, thereby enabling the treatment of the tumor. In order to provide doctors with the best ablation method corresponding to different patients and realize individualized conformal ablation, it is necessary to design the position and direction of the needle in the preoperative planning stage according to the tumor and the positions of important tissue and blood vessels provided by the preoperative image. On this basis, the simulation generates the extent of the ablation area. By comparing the position and size relationship between the ablation area and the tumor, the position and direction of the needle insertion can be adjusted, so as to finally determine the best ablation plan suitable for the patient, and guide the actual ablation during the subsequent operation, so as to improve the overall operation efficiency. Therefore, in preoperative planning, according to the position and direction of the ablation needle, the prediction of the size and shape of the ablation area is the basis for designing the optimal ablation plan.
消融区域成因复杂,其大小形状不仅与消融针的功率时间相关,同时也受周围血管的热沉效应、组织肿瘤组织特性等复杂因素影响。当前,使用的消融区域生成模型分为椭球模型和基于组织的比吸收率Specific Absorption Rate(SAR)分布模型。对于第一种模型,是将消融区域近似为椭球,椭球长轴方向为消融针入针方向,而长轴短轴的大小可由用户自定义或设定为经验数值。而SAR分布模型则体现了组织吸收微波后升高的温度,通过阿累尼乌斯方程计算热损伤,则可以确定消融针产生的消融区域范围。SAR分布模型与阿累尼乌斯热损伤方程包含了组织和血液的密度和比热,组织导热率以及血液灌注率等参数。因此相比椭球模型,SAR分布模型包含了影响消融区域生成的重要因素。但是,SAR模型在计算血管热沉效应时需要精确的血管分割结果,同时由于不同病人组织与血液的相关参数存在差异,并且这些参数的真实值很难获取,因此SAR分布模型求解的消融区域与真实消融效果依然有较大差异。这严重降低了术前规划对后续真实手术的临床指导意义。The cause of the ablation area is complex, and its size and shape are not only related to the power time of the ablation needle, but also affected by complex factors such as the heat sink effect of the surrounding blood vessels and the characteristics of the tissue and tumor tissue. Currently, the used ablation area generation models are divided into ellipsoid models and tissue-based Specific Absorption Rate (SAR) distribution models. For the first model, the ablation area is approximated as an ellipsoid, the direction of the long axis of the ellipsoid is the direction of needle insertion, and the size of the short axis of the long axis can be user-defined or set as an empirical value. The SAR distribution model reflects the increased temperature of the tissue after absorbing microwaves. By calculating the thermal damage through the Arrhenius equation, the range of the ablation area generated by the ablation needle can be determined. The SAR distribution model and the Arrhenius thermal damage equation include parameters such as tissue and blood density and specific heat, tissue thermal conductivity, and blood perfusion rate. Therefore, compared with the ellipsoid model, the SAR distribution model contains important factors that affect the generation of ablation regions. However, the SAR model needs accurate blood vessel segmentation results when calculating the vascular heat sink effect. At the same time, because the parameters related to different patient tissues and blood are different, and the real values of these parameters are difficult to obtain, the ablation area solved by the SAR distribution model is different from the The actual ablation effect is still quite different. This seriously reduces the clinical significance of preoperative planning for subsequent real operations.
发明内容SUMMARY OF THE INVENTION
为克服现有技术的缺陷,本发明要解决的技术问题是提供了一种针对肿瘤热消融的术前消融区域模拟方法,其不仅避免了大量复杂参数的获取以及血管等相关组织的分割,而且预测得到的消融区域更加接近真实消融效果,使术前规划对后续真实手术具有临床指导意义。In order to overcome the defects of the prior art, the technical problem to be solved by the present invention is to provide a preoperative ablation area simulation method for tumor thermal ablation, which not only avoids the acquisition of a large number of complex parameters and the segmentation of related tissues such as blood vessels, but also The predicted ablation area is closer to the real ablation effect, so that preoperative planning has clinical guiding significance for subsequent real operations.
本发明的技术方案是:这种针对肿瘤热消融的术前消融区域模拟方法,其包括以下步骤:The technical solution of the present invention is: this preoperative ablation area simulation method for tumor thermal ablation includes the following steps:
(1)选择适用于训练的数据,医生对术前术后影像进行标注,获得术前肝脏、术后消融区域以及针道;(1) Select the data suitable for training, and the doctor annotates the preoperative and postoperative images to obtain the preoperative liver, the postoperative ablation area and the needle track;
(2)将术后影像向术前影像配准,在配准过程中加入刚性限制,使得消融区域与针道区域不发生弹性形变,利用配准得到的形变场将针道信息与消融区域投影到术前图像上;(2) Register the postoperative image to the preoperative image, and add rigid constraints during the registration process to prevent elastic deformation between the ablation area and the needle track area, and use the deformation field obtained by registration to project the needle track information and the ablation area. onto the preoperative image;
(3)根据投影后的针道方向和位置信息以及对应的术中采用的功率时间生成理想热场分布图;(3) Generate an ideal thermal field distribution map according to the projected needle track direction and position information and the corresponding power time used in the operation;
(4)建立卷积神经网络,将理想热场分布图与术前图像根据术前肝脏掩模进行裁剪,将裁剪结果合并作为网络输入,以形变后的消融区域作为金标准进行学习,获得回归模型,在测试阶段实(4) Establish a convolutional neural network, crop the ideal heat field distribution map and the preoperative image according to the preoperative liver mask, combine the cropping results as the network input, and use the deformed ablation area as the gold standard for learning to obtain regression model, implemented in the testing phase
现对消融区域的预测。Prediction of the ablation area now.
本发明利用回顾性消融数据,在真实消融结果的基础上,通过深度学习,建立回归模型,对消融区域进行预测。不同于椭球与SAR分布模型预测方法,本发明以术后获得的真实消融区域作为金标准,以术前影像与消融针产生的理想热场作为输入,利用卷积神经网络建立回归模型,这不仅避免了大量复杂参数的获取以及血管等相关组织的分割,同时以真实消融区域为金标准,预测得到的消融区域更加接近真实消融效果,使术前规划对后续真实手术具有临床指导意义。The present invention utilizes retrospective ablation data, establishes a regression model through deep learning on the basis of real ablation results, and predicts the ablation area. Different from the ellipsoid and SAR distribution model prediction methods, the present invention takes the real ablation area obtained after surgery as the gold standard, takes the preoperative image and the ideal thermal field generated by the ablation needle as the input, and uses the convolutional neural network to establish a regression model. It not only avoids the acquisition of a large number of complex parameters and the segmentation of related tissues such as blood vessels, but also takes the real ablation area as the gold standard, and the predicted ablation area is closer to the real ablation effect, so that preoperative planning has clinical guiding significance for subsequent real operations.
还提供了针对肿瘤热消融的术前消融区域模拟装置,其包括:Also provided is a preoperative ablation area simulation device for thermal tumor ablation, including:
标注模块,其配置来选择适用于训练的数据,医生对术前术后影像进行标注,获得术前肝脏、术后消融区域以及针道;The labeling module is configured to select data suitable for training. The doctor labels the preoperative and postoperative images to obtain the preoperative liver, the postoperative ablation area and the needle track;
配准模块,其配置来将术后影像向术前影像配准,在配准过程中加入刚性限制,使得消融区域与针道区域不发生弹性形变,利用配准得到的形变场将针道信息与消融区域投影到术前图像上;The registration module is configured to register the postoperative image to the preoperative image. In the registration process, rigid constraints are added to prevent elastic deformation between the ablation area and the needle track area. Projecting the ablation area onto the preoperative image;
热场图生成模块,其配置来根据投影后的针道方向和位置信息以及对应的术中采用的功率时间生成理想热场分布图;a heat field map generation module, which is configured to generate an ideal heat field distribution map according to the projected needle track direction and position information and the corresponding power time used in the operation;
深度学习模块,其配置来建立卷积神经网络,将理想热场分布图与术前图像根据术前肝脏掩模进行裁剪,将裁剪结果合并作为网络输入,以形变后的消融区域作为金标准进行学习,获得回归模型,在测试阶段实现对消融区域的预测。The deep learning module is configured to build a convolutional neural network, crop the ideal heat field distribution map and the preoperative image according to the preoperative liver mask, merge the cropping results as the network input, and use the deformed ablation area as the gold standard. Learn, obtain a regression model, and achieve prediction of ablation regions in the testing phase.
附图说明Description of drawings
图1是根据本发明的针对肿瘤热消融的术前消融区域模拟方法的流程图。FIG. 1 is a flowchart of a preoperative ablation area simulation method for thermal tumor ablation according to the present invention.
具体实施方式Detailed ways
如图1所示,这种针对肿瘤热消融的术前消融区域模拟方法,其包括以下步骤:As shown in Figure 1, the preoperative ablation area simulation method for tumor thermal ablation includes the following steps:
(1)选择适用于训练的数据,医生对术前术后影像进行标注,获得术前肝脏、术后消融区域以及针道;(1) Select the data suitable for training, and the doctor annotates the preoperative and postoperative images to obtain the preoperative liver, the postoperative ablation area and the needle track;
(2)将术后影像向术前影像配准,在配准过程中加入刚性限制,使得消融区域与针道区域不发生弹性形变,利用配准得到的形变场将针道信息与消融区域投影到术前图像上;(2) Register the postoperative image to the preoperative image, and add rigid constraints during the registration process to prevent elastic deformation between the ablation area and the needle track area, and use the deformation field obtained by registration to project the needle track information and the ablation area. onto the preoperative image;
(3)根据投影后的针道方向和位置信息以及对应的术中采用的功率时间生成理想热场分布图;(3) Generate an ideal thermal field distribution map according to the projected needle track direction and position information and the corresponding power time used in the operation;
(4)建立卷积神经网络,将理想热场分布图与术前图像根据术前肝脏掩模进行裁剪,将裁剪结果合并作为网络输入,以形变后的消融区域作为金标准进行学习,获得回归模型,在测试阶段实现对消融区域的预测。(4) Establish a convolutional neural network, crop the ideal heat field distribution map and the preoperative image according to the preoperative liver mask, combine the cropping results as the network input, and use the deformed ablation area as the gold standard for learning to obtain regression A model that achieves prediction of ablation regions during the testing phase.
本发明利用回顾性消融数据,在真实消融结果的基础上,通过深度学习,建立回归模型,对消融区域进行预测。不同于椭球与SAR分布模型预测方法,本发明以术后获得的真实消融区域作为金标准,以术前影像与消融针产生的理想热场作为输入,利用卷积神经网络建立回归模型,这不仅避免了大量复杂参数的获取以及血管等相关组织的分割,同时以真实消融区域为金标准,预测得到的消融区域更加接近真实消融效果,使术前规划对后续真实手术具有临床指导意义。The present invention utilizes retrospective ablation data, establishes a regression model through deep learning on the basis of real ablation results, and predicts the ablation area. Different from the ellipsoid and SAR distribution model prediction methods, the present invention takes the real ablation area obtained after surgery as the gold standard, takes the preoperative image and the ideal thermal field generated by the ablation needle as the input, and uses the convolutional neural network to establish a regression model. It not only avoids the acquisition of a large number of complex parameters and the segmentation of related tissues such as blood vessels, but also takes the real ablation area as the gold standard, and the predicted ablation area is closer to the real ablation effect, so that preoperative planning has clinical guiding significance for subsequent real operations.
对于每个病人的消融数据包含术前术后MR影像以及术中采用的消融针功率、消融时间信息。优选地,所述步骤(1)中,为了使网络能学习到血管热沉效应的影响,医生对术前术后影像进行标注的及后续配准、预测训练的影像均处于静脉期,静脉期内肝脏血管相比其他期与肝脏的对比度更强;对于肝脏与消融区域标注时将它们的轮廓画出;针道的标注则是在术后影像上标记消融针的针尖点以及消融针与消融区域的交点世界坐标,由于消融针近乎于刚体,将其视为术后图像中的穿过两个标记点的射线,其中射线的顶点为针尖点。The ablation data for each patient includes preoperative and postoperative MR images, as well as the information of the ablation needle power and ablation time used during the operation. Preferably, in the step (1), in order to enable the network to learn the influence of the vascular heat sink effect, the images marked by the doctor on the preoperative and postoperative images and the images for subsequent registration and prediction training are all in the venous phase, and the venous phase Compared with other stages, the contrast between the internal liver blood vessels and the liver is stronger; the outlines of the liver and the ablation area are drawn; the needle track is marked by marking the needle point of the ablation needle and the ablation needle and ablation on the postoperative image. The world coordinate of the intersection point of the region. Since the ablation needle is nearly rigid, it is regarded as a ray passing through two marked points in the postoperative image, where the vertex of the ray is the needle tip point.
优选地,所述步骤(1)中,标注完成后,分别获得术前肝脏L与术后消融区域A掩模图像,以及消融针摆放位置、方向参数。Preferably, in the step (1), after the labeling is completed, the mask images of the preoperative liver L and the postoperative ablation area A, as well as the position and direction parameters of the ablation needle are obtained respectively.
术前术后影像中病人的位姿可能会存在差异,同时肝脏为弹性组织,由于呼吸影响,术前术后影像中肝脏发生非刚性形变,因此我们将采用两步配准的方式实现术前术后影像的匹配。优选地,所述步骤(2)包括以下分步骤:There may be differences in the patient's posture in the preoperative and postoperative images. At the same time, the liver is an elastic tissue. Due to the influence of breathing, the liver undergoes non-rigid deformation in the preoperative and postoperative images. Therefore, we will use a two-step registration method to achieve preoperative Matching of postoperative images. Preferably, the step (2) includes the following sub-steps:
(2.1)术后影像向术前影像进行刚性配准,通过刚性配准消除由病人位姿产生的平移、旋转的差异,刚性配准后获得形变矩阵;(2.1) Rigid registration of postoperative images to preoperative images is performed, and the differences in translation and rotation caused by the patient's pose are eliminated through rigid registration, and the deformation matrix is obtained after rigid registration;
(2.2)采用非刚性配准算法求解肝脏区域内形变场进一步减少术前术后影像间的差异。(2.2) The non-rigid registration algorithm was used to solve the deformation field in the liver region to further reduce the difference between preoperative and postoperative images.
优选地,所述步骤(2.2)中,为了避免消融区域与针道变形,在配准过程中保持消融区域与针道为刚体;对于消融区域,在配准过程中通过刚性限制项保持其刚体;对于消融针,由于标记点均在消融区域内,因此消融区域的刚性限制也使得消融针在配准过程中保持为刚体。Preferably, in the step (2.2), in order to avoid the deformation of the ablation region and the needle track, the ablation region and the needle track are kept as rigid bodies during the registration process; for the ablation region, the rigid body is maintained during the registration process through a rigid restriction term ; For the ablation needle, since the marked points are all within the ablation area, the rigidity of the ablation area also makes the ablation needle remain rigid during the registration process.
优选地,所述步骤(3)中,理想SAR模型产生的热场为以消融针为轴对称的分布,根据形变后消融针信息与理想SAR分布模型,获得热场图像。Preferably, in the step (3), the thermal field generated by the ideal SAR model is a symmetrical distribution with the ablation needle as the axis, and the thermal field image is obtained according to the deformed ablation needle information and the ideal SAR distribution model.
优选地,所述步骤(4)中,采用U-Net网络实现消融区域的预测,输入的数据为术前MR图像与热场图像的合并图像,形变后的消融区域掩模图像将作为金标准,术前静脉期影像提供重要的血管、肝脏肿瘤特性信息,而热场图像则提供重要的消融针特性信息。Preferably, in the step (4), the U-Net network is used to predict the ablation area, the input data is the combined image of the preoperative MR image and the thermal field image, and the deformed mask image of the ablation area will be used as the gold standard , the preoperative venous phase images provide important information on the characteristics of blood vessels and liver tumors, while the thermal field images provide important information on the characteristics of ablation needles.
优选地,所述步骤(4)中,利用标注好的肝脏掩膜对术前图像与热场图像进行剪裁,并且以预测的消融区域与真实消融区域之间的重叠率作为损失函数loss。通过学习,最终获得消融区域预测模型,对于输入测试数据,可以实现消融区域的快速精确预测。Preferably, in the step (4), the preoperative image and the thermal field image are cropped by using the marked liver mask, and the loss function loss is the overlap ratio between the predicted ablation area and the real ablation area. Through learning, the prediction model of the ablation area is finally obtained, and for the input test data, fast and accurate prediction of the ablation area can be achieved.
本领域普通技术人员可以理解,实现上述实施例方法中的全部或部分步骤是可以通过程序来指令相关的硬件来完成,所述的程序可以存储于一计算机可读取存储介质中,该程序在执行时,包括上述实施例方法的各步骤,而所述的存储介质可以是:ROM/RAM、磁碟、光盘、存储卡等。因此,与本发明的方法相对应的,本发明还同时包括一种针对肿瘤热消融的术前消融区域模拟装置,该装置通常以与方法各步骤相对应的功能模块的形式表示。该装置包括:Those of ordinary skill in the art can understand that all or part of the steps in the method of the above-mentioned embodiments can be completed by instructing the relevant hardware through a program, and the program can be stored in a computer-readable storage medium, and the program can be stored in a computer-readable storage medium. During execution, it includes each step of the method in the above embodiment, and the storage medium may be: ROM/RAM, magnetic disk, optical disk, memory card, and the like. Therefore, corresponding to the method of the present invention, the present invention also includes a preoperative ablation area simulation device for tumor thermal ablation, which is usually expressed in the form of functional modules corresponding to each step of the method. The device includes:
标注模块,其配置来选择适用于训练的数据,医生对术前术后影像进行标注,获得术前肝脏、术后消融区域以及针道;The labeling module is configured to select data suitable for training. The doctor labels the preoperative and postoperative images to obtain the preoperative liver, the postoperative ablation area and the needle track;
配准模块,其配置来将术后影像向术前影像配准,在配准过程中加入刚性限制,使得消融区域与针道区域不发生弹性形变,利用配准得到的形变场将针道信息与消融区域投影到术前图像上;The registration module is configured to register the postoperative image to the preoperative image. In the registration process, rigid constraints are added to prevent elastic deformation between the ablation area and the needle track area. Projecting the ablation area onto the preoperative image;
热场图生成模块,其配置来根据投影后的针道方向和位置信息以及对应的术中采用的功率时间生成理想热场分布图;a heat field map generation module, which is configured to generate an ideal heat field distribution map according to the projected needle track direction and position information and the corresponding power time used in the operation;
深度学习模块,其配置来建立卷积神经网络,将理想热场分布图与术前图像根据术前肝脏掩模进行裁剪,将裁剪结果合并作为网络输入,以形变后的消融区域作为金标准进行学习,获得回归模型,在测试阶段实现对消融区域的预测。The deep learning module is configured to build a convolutional neural network, crop the ideal heat field distribution map and the preoperative image according to the preoperative liver mask, merge the cropping results as the network input, and use the deformed ablation area as the gold standard. Learn, obtain a regression model, and achieve prediction of ablation regions in the testing phase.
以上所述,仅是本发明的较佳实施例,并非对本发明作任何形式上的限制,凡是依据本发明的技术实质对以上实施例所作的任何简单修改、等同变化与修饰,均仍属本发明技术方案的保护范围。The above are only preferred embodiments of the present invention, and do not limit the present invention in any form. Any simple modifications, equivalent changes and modifications made to the above embodiments according to the technical essence of the present invention still belong to the present invention The protection scope of the technical solution of the invention.
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