CN115248197A - A three-dimensional imaging device and imaging method - Google Patents
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Abstract
Description
技术领域technical field
本发明实施例涉及成像技术领域,尤其涉及一种三维成像装置和成像方法。Embodiments of the present invention relate to the field of imaging technologies, and in particular, to a three-dimensional imaging device and an imaging method.
背景技术Background technique
通过成像方式获取样品的三维结构信息是生物学和医学研究和检测的重要技术之一。在短时间内通过成像获得更多图像像素,以提取样品的更多信息是三维成像技术发展的重要方向。Obtaining the three-dimensional structure information of samples by imaging is one of the important technologies for biological and medical research and detection. Obtaining more image pixels through imaging in a short time to extract more information about samples is an important direction for the development of 3D imaging technology.
为了特异性识别生物学与医学样品中不同部位的特异性信号,通常可采用荧光分子标记等方式使样品内的不同分子可以在特定激光的照明下产生特异性的荧光信号。以全覆盖的方式收集样品内所有区域的这些信号,可以重构生成样品的三维结构。三维样品成像通量取决于采用何种全覆盖方式来覆盖所有样品区域。In order to specifically identify specific signals from different parts of biological and medical samples, fluorescent molecular markers are usually used to enable different molecules in the sample to generate specific fluorescent signals under the illumination of a specific laser. Collecting these signals from all regions within the sample in full coverage allows the reconstruction of the resulting three-dimensional structure of the sample. 3D sample imaging throughput depends on which full coverage method is used to cover all sample areas.
现有的成像技术通常先获得样品检测区域内的平面成像,再对相互平行的样品平面进行成像,再将这些相互平行的平面进行叠加从而重建样品的三维图像。以扫描共聚焦成像或光切片成像为例,现有成像技术通常采用的成像方案为:首先对与成像方向(即检测光路的主轴z方向)垂直的一个平面逐点成像(共聚焦成像),或者对部分整个视野同时成像(光切片成像);然后在z方向上根据分辨率要求进行平移,到达一个新的平面,对新平面成像;重复以上运动与成像,直到在z方向上覆盖样品,完成一个视野内的三维成像。由于在z方向平移运动的同时进行成像容易产生运动模糊,通常是仅在样品在目标位置静止时进行曝光成像。由于样品在相邻的z位置之间运动所花费的时间通常远大于曝光时间,这些无效成像时间降低了成像通量。Existing imaging techniques usually obtain the plane imaging in the sample detection area first, then image the parallel sample planes, and then superimpose these mutually parallel planes to reconstruct the three-dimensional image of the sample. Taking scanning confocal imaging or optical slice imaging as an example, the imaging scheme usually adopted by the existing imaging technology is as follows: first, point-by-point imaging (confocal imaging) of a plane perpendicular to the imaging direction (ie, the z direction of the main axis of the detection optical path), Or image part of the entire field of view at the same time (optical slice imaging); then translate in the z direction according to the resolution requirements, reach a new plane, and image the new plane; repeat the above movement and imaging until the sample is covered in the z direction, Complete three-dimensional imaging within a field of view. Because imaging while translational in the z-direction is prone to motion blur, exposure imaging is typically performed only when the sample is stationary at the target position. Since the time it takes for the sample to move between adjacent z-positions is typically much greater than the exposure time, these ineffective imaging times reduce imaging throughput.
在多角度光切片成像技术中,采用样品转动一定角度,然后停顿开始扫描完成一个层面的成像,完成后接着再转动一定角度停顿后再扫描成像,通过多个角度(通常不超过8个不同角度)的多视角成像,可以对样品进行三维重构。但是在不同角度之间旋转的过程中,也包含了大量的中断成像的过程。每次转动以及等待启动、停止引起的振动耗散后,才能开始继续成像,从而产生长时间的成像中断,增加了成像时间和成像的工作量,降低了成像通量。In the multi-angle optical slice imaging technology, the sample is rotated at a certain angle, and then stops to start scanning to complete the imaging of a layer, and then rotates at a certain angle to stop before scanning and imaging through multiple angles (usually no more than 8 different angles) ) multi-view imaging, which can perform three-dimensional reconstruction of the sample. However, the process of rotating between different angles also includes a large number of interrupted imaging processes. Imaging can only be continued after each rotation and waiting for the vibration caused by starting and stopping to dissipate, resulting in long-term imaging interruptions, increasing imaging time and imaging workload, and reducing imaging throughput.
发明内容SUMMARY OF THE INVENTION
本发明提供一种三维成像装置和成像方法,以实现在三维成像过程中多视角连续成像,并减少不必要的成像中断,提高成像速度和成像效率。The invention provides a three-dimensional imaging device and an imaging method to realize multi-view continuous imaging during the three-dimensional imaging process, reduce unnecessary imaging interruptions, and improve imaging speed and imaging efficiency.
第一方面,本发明提供了一种三维成像装置,该装置包括:In a first aspect, the present invention provides a three-dimensional imaging device, the device comprising:
至少一个照明装置,包含照明光源和照明光路,用于对待测样品进行照明或激发;At least one illuminating device, including an illuminating light source and an illuminating light path, for illuminating or exciting the sample to be tested;
至少一个检测装置,包含检测器和检测光路,用于检测所述待测样品在待测区域内被所述照明装置激发产生的信号;At least one detection device, including a detector and a detection optical path, used to detect the signal generated by the sample to be tested excited by the illumination device in the area to be tested;
至少一个转动机构,用于使所述待测样品在成像过程中,与所述照明装置和所述检测装置产生相对转动;at least one rotating mechanism, used to make the sample under test rotate relative to the illuminating device and the detecting device during the imaging process;
其中,所述照明光路将照明光源以扫描光束的形式激发所述待测样品;所述检测光路的主轴与所述照明光路的主轴相交且夹角不为零;所述照明光路的主轴与所述检测光路的主轴所在平面,与所述转动机构的转轴重合、平行或垂直。Wherein, the illumination light path excites the sample to be measured by the illumination light source in the form of a scanning beam; the main axis of the detection optical path intersects with the main axis of the illumination optical path and the included angle is not zero; the main axis of the illumination optical path and the The plane where the main axis of the detection optical path is located coincides with, is parallel to or perpendicular to the rotation axis of the rotation mechanism.
可选的,在所述照明装置中包含至少一个扫描机构,用于连续移动照明光源形成扫描光束。Optionally, at least one scanning mechanism is included in the illuminating device, which is used to continuously move the illuminating light source to form a scanning light beam.
可选的,所述扫描机构包含一个或多个扫描振镜、共振扫描镜、旋转多面镜或声光调制器。Optionally, the scanning mechanism includes one or more scanning galvanometers, resonant scanning mirrors, rotating polygonal mirrors or acousto-optic modulators.
可选的,所述照明装置包含一个或多个激光器、发光二极管或X射线发生器。Optionally, the illuminating device includes one or more lasers, light emitting diodes or X-ray generators.
可选的,所述待测样品被所述照明装置激发产生的信号为荧光、弹性散射光、拉曼散射、二次谐波信号、三次谐波信号或激拉曼散射信号中的一种或多种。Optionally, the signal generated by the sample to be tested excited by the illumination device is one of fluorescence, elastic scattered light, Raman scattering, second harmonic signal, third harmonic signal or Exciting Raman scattering signal or Various.
可选的,所述检测装置与所述照明装置同步工作。Optionally, the detection device works synchronously with the lighting device.
可选的,所述检测器以电荷耦合元件或互补式金属氧化物半导体阵列作为成像器件。Optionally, the detector uses a charge-coupled element or a complementary metal-oxide-semiconductor array as an imaging device.
可选的,所述转动机构包括至少一个旋转装置,或旋转装置与直线运动装置的组合装置。Optionally, the rotating mechanism includes at least one rotating device, or a combined device of a rotating device and a linear motion device.
可选的,所述转动机构还包括至少一个控制装置,用于控制所述旋转装置和所述直线运动装置的运动。Optionally, the rotation mechanism further includes at least one control device for controlling the movement of the rotation device and the linear motion device.
第二方面,本发明实施例还提供了一种三维成像方法,该方法包括:In a second aspect, the embodiment of the present invention also provides a three-dimensional imaging method, the method comprising:
控制至少一个照明装置,沿照明光路的主轴方向在样品检测区域内激发待测样品产生被检测的信号;Controlling at least one lighting device to excite the sample to be tested in the sample detection area along the main axis direction of the illumination light path to generate a detected signal;
控制至少一个检测装置,沿检测光路的主轴方向检测所述样品检测区域内产生的信号;Controlling at least one detection device to detect signals generated in the sample detection area along the main axis of the detection optical path;
控制至少一个转动机构,使所述待测样品在成像过程中,与所述照明装置和所述检测装置产生相对转动,并通过所述至少一个检测装置采集所述待测样品在不同待测区域产生的信号;Controlling at least one rotating mechanism, so that the sample to be tested rotates relative to the illumination device and the detection device during the imaging process, and the sample to be tested is collected in different regions to be tested by the at least one detection device the signal generated;
将采集到的信号转为数字信号;Convert the collected signal into a digital signal;
基于所述数字信号进行图像重建得到所述待测样本的三维图像;performing image reconstruction based on the digital signal to obtain a three-dimensional image of the sample to be tested;
其中,所述照明光路将照明光源以扫描光束的形式激发所述待测样品;所述检测光路的主轴与所述照明光路的主轴相交;所述转动机构沿与由所述照明光路的主轴和所述检测光路的主轴所在平面相平行或垂直的转轴转动;所述扫描光束的扫描方向与所述转轴方向平行或垂直。Wherein, the illumination light path excites the sample to be measured by the illumination light source in the form of a scanning beam; the main axis of the detection optical path intersects with the main axis of the illumination light path; The plane where the main axis of the detection optical path is located rotates parallel to or perpendicular to the rotation axis; the scanning direction of the scanning light beam is parallel to or perpendicular to the direction of the rotation axis.
可选的,所述控制至少一个转动机构,使所述待测样品在成像过程中,与所述照明装置和所述检测装置产生相对转动,包括:Optionally, the controlling at least one rotating mechanism to cause the sample to be tested to rotate relative to the illuminating device and the detecting device during the imaging process includes:
控制至少一个转动机构,使所述待测样品在成像过程中连续转动,或者,直线运动及旋转运动组合的方式连续运动,与所述照明装置和所述检测装置产生相对转动。At least one rotating mechanism is controlled so that the sample to be tested rotates continuously during the imaging process, or continuously moves in a combination of linear motion and rotary motion, and generates relative rotation with the illumination device and the detection device.
可选的,所述待测样品在预设时间内被所述照明装置激发;其中,在所述预设时间内,所述待测样品在所述相对转动过程中产生的位移分别小于或等于三维成像装置的纵向分辨率和横向分辨率。Optionally, the sample to be tested is excited by the lighting device within a preset time; wherein, within the preset time, the displacements of the sample to be tested during the relative rotation are less than or equal to Longitudinal resolution and lateral resolution of 3D imaging device.
本发明实施例的技术方案,通过在检测样品信号的过程中使样品与照明装置、检测装置进行匀速相对运动,即在样品转动的同时进行连续的信号采集,解决了三维成像过程中成像中断时间长,成像效率低的问题,提高成像通量;可以减少三维成像过程中的成像中断,消除现有三维成像技术中成像时样品转动引起的模糊并改善像差。The technical solution of the embodiment of the present invention solves the problem of imaging interruption time in the three-dimensional imaging process by making the sample, the illumination device and the detection device move relative to each other at a uniform speed during the process of detecting the sample signal, that is, performing continuous signal acquisition while the sample is rotating. Long, low imaging efficiency, improve imaging throughput; can reduce imaging interruption in the process of three-dimensional imaging, eliminate blur caused by sample rotation during imaging in existing three-dimensional imaging technology, and improve aberrations.
附图说明Description of drawings
图1是本发明实施例一所提供的一种三维成像装置的结构示意图;FIG. 1 is a schematic structural diagram of a three-dimensional imaging device provided by
图2是本发明实施例一所提供的一种样品转动机构的三维结构示意图;Fig. 2 is a three-dimensional structural schematic diagram of a sample rotating mechanism provided by
图3是本发明实施例一所提供的一种三维成像扫描过程的示意图;Fig. 3 is a schematic diagram of a three-dimensional imaging scanning process provided by
图4是本发明实施例一所提供的一种成像扫描示意图;FIG. 4 is a schematic diagram of an imaging scan provided by
图5是本发明实施例一所提供的一种连续扫描消除成像运动模糊原理示意图;Fig. 5 is a schematic diagram of the principle of continuous scanning to eliminate motion blur in imaging provided by
图6是本发明实施例一所提供的一种小鼠大脑荧光成像实例示意图;6 is a schematic diagram of a mouse brain fluorescence imaging example provided by
图7是本发明实施例一所提供的一种获取成像信号过程中成像样品移动轨迹的示意图;Fig. 7 is a schematic diagram of the moving track of an imaging sample in the process of acquiring imaging signals provided by
图8是本发明实施例一所提供的一种获取成像信号过程中成像样品移动轨迹的示意图;Fig. 8 is a schematic diagram of the moving track of an imaging sample in the process of acquiring imaging signals provided by
图9是本发明实施例一所提供的一种获取成像信号过程中成像样品移动轨迹的示意图;FIG. 9 is a schematic diagram of the moving track of an imaging sample in the process of acquiring imaging signals provided by
图10是本发明实施例一所提供的一种成像样品的三维成像效果示意图。FIG. 10 is a schematic diagram of a three-dimensional imaging effect of an imaging sample provided by
具体实施方式Detailed ways
下面结合附图和实施例对本发明作进一步的详细说明。可以理解的是,此处所描述的具体实施例仅仅用于解释本发明,而非对本发明的限定。另外还需要说明的是,为了便于描述,附图中仅示出了与本发明相关的部分而非全部结构。The present invention will be further described in detail below in conjunction with the accompanying drawings and embodiments. It should be understood that the specific embodiments described here are only used to explain the present invention, but not to limit the present invention. In addition, it should be noted that, for the convenience of description, only some structures related to the present invention are shown in the drawings but not all structures.
实施例一Example 1
图1为本发明实施例一提供的三维成像装置的结构示意图,本实施例可适用于利用该装置进行三维成像的情况,特别是对生物学与医学样品进行三维成像。FIG. 1 is a schematic structural diagram of a three-dimensional imaging device provided by
如图1所示,三维成像装置具体包括:至少一个照明装置1,至少一个检测装置2;至少一个转动机构3。其中,照明装置1中由照明光源和照明光路组成,照明光源以波长488纳米的激光器4为例,照明光路中包括以扫描振镜5为例的扫描机构、中继透镜9,扫描振镜5以扫描光束的形式激发待测样品;其中,检测装置2由检测器和检测光路组成,检测器以互补金属氧化物半导体(CMOS)阵列相机6为例,检测光路包含物镜7和镜筒透镜8;其中,照明光路的主轴与检测光路的主轴以不为零的夹角相交,此处以垂直相交为例。As shown in FIG. 1 , the three-dimensional imaging device specifically includes: at least one
其中,样品检测区域位于转动机构3中,可参考图2所示的转动机构的三维示意图所示的检测区域。其中,由照明光路的主轴与检测光路的主轴二者所在平面,与所述转动机构的转轴平行或垂直,此处以垂直布置为例;其中,转动机构中设置一个旋转电机和一个直线运动电机为例,用于使样品在成像过程中,与所述照明装置和所述检测装置产生相对转动,获取样品的不同待测区域;其中,旋转电机和直线运动电机为匀速运动。Wherein, the sample detection area is located in the rotating mechanism 3 , and reference may be made to the detection area shown in the three-dimensional schematic diagram of the rotating mechanism shown in FIG. 2 . Wherein, the plane where the main shaft of the illumination optical path and the main shaft of the detection optical path are located is parallel or perpendicular to the rotating shaft of the rotating mechanism, and the vertical arrangement is taken as an example here; wherein, a rotating motor and a linear motion motor are arranged in the rotating mechanism as For example, it is used to cause the sample to rotate relative to the illumination device and the detection device during the imaging process to obtain different regions of the sample to be measured; wherein, the rotating motor and the linear motion motor move at a uniform speed.
这里需要说明的是,在图1中仅示出了一个照明装置1、一个检测装置2以及一个转动机构3。以照明装置1为例,当三维成像装置包含多个照明装置1时,各照明装置1的激发光源是不一样的,不同波长的激发光源可以针对不同的待测样品进行照明与激发。在进行成像的过程中,可以根据需要的激发光的波长范围选择相应的照明装置1。It should be noted here that only one
三维成像过程可参考图3所示。在图3中,分别示出了在成像过程中,样品检测区域的俯视图、前视图与左视图。俯视图中的箭头表示样品旋转过程中的运动方向,点或不同灰度值的线条表示被照明采样的样品单元。样品与成像装置间保持连续的顺时针、匀速螺旋向上的转动,相对转动的轴方向分别与所述照明光路的主轴方向、所述检测光路的主轴方向垂直。前视图的成像面中的箭头表示通过振镜扫描调制的激光光束扫描方向。通过三维成像装置连续采集的两个图像对应的样品区域不共面。在一种优选的实施方式中,可以通过转动机构控制样品的移动速度,使成像面调制一个周期时,样品在所述相对转动的转轴方向上移动一个视场的距离。其中,成像面调制一个周期是指成像面沿着相对转动的转轴方向转动一周,与起始位置的成像面在同一个平面上。The three-dimensional imaging process can be referred to as shown in Figure 3. In FIG. 3 , the top view, front view and left view of the sample detection area during the imaging process are respectively shown. Arrows in the top view indicate the direction of motion during sample rotation, and dots or lines of different gray values indicate sample units that are sampled by illumination. The sample and the imaging device keep a continuous clockwise and spiral upward rotation at a constant speed, and the directions of the relative rotation axes are respectively perpendicular to the main axis direction of the illumination optical path and the main axis direction of the detection optical path. The arrows in the imaging plane of the front view indicate the scanning direction of the laser beam modulated by the galvanometer scan. The sample areas corresponding to the two images continuously collected by the three-dimensional imaging device are not coplanar. In a preferred embodiment, the moving speed of the sample can be controlled by the rotating mechanism, so that when the imaging surface is modulated for one period, the sample moves a distance of one field of view in the direction of the relative rotation axis. Wherein, one period of modulation of the imaging surface means that the imaging surface rotates one cycle along the direction of the relative rotation axis, and is on the same plane as the imaging surface at the initial position.
因为在成像样品转动的同时基本不间断的采集信号进行成像,且相对转动具有匀速、基本不停顿的特征,所以减少了不必要的成像中断。当在所述检测装置的有效检测区域中,成像的样品单元在特定时间内被所述照明装置激发时(限制激发时间),运动引起的模糊可以忽略不计,即可以消除了速度变化或启动、停顿引起的不规则抖动。其中,在所述特定时间内,由所述相对转动产生的位移不大于所述三维成像装置的分辨率。若仍然存在的运动引起的模糊,可以通过去卷积等方法计算消除运动模糊。Since the imaging sample is rotated while collecting signals for imaging, and the relative rotation has a uniform speed and basically no pause, unnecessary interruption of imaging is reduced. When in the effective detection area of the detection device, the imaged sample unit is excited by the illumination device for a certain time (limited excitation time), the blurring caused by motion is negligible, that is, speed changes or start-up, Irregular jitters caused by pauses. Wherein, within the specified time, the displacement generated by the relative rotation is not greater than the resolution of the three-dimensional imaging device. If the blur caused by motion still exists, it can be calculated and eliminated by methods such as deconvolution.
进一步地,限制激发时间可以通过脉宽适当的脉冲光源实现,或者连续光源也可以通过适当的开关调制用来照明。但更高效的,连续光源也可以通过扫描方式实现对点的短时间激发,一种具体扫描方式如图4所示,即连续光束在相机感光元件上快速扫描,扫描到的感光元件此时开始曝光并记录,扫描和曝光同步直到完成一帧画面。一种实现方式如图5所示为例,显微镜视野,以成像相机为参考,宽度d为2000像素。相应的,线形的激发光宽度约为10像素。当激发光在0.01秒内扫过整个视野时,每一像素实际被激发的时间仅约为0.01秒除以2000乘以10即50微秒。为实现转动扫描和成像的同步,消除成像过程中转动引起的运动模糊。相机像素数2000×2000,像素尺寸6.5×6.5微米,全幅帧率100Hz即10毫秒每帧。振镜6以单向10毫秒的锯齿波同步扫描。样品转动的最大线速度小于100微米/秒即1微米/帧。运动引起的模糊小于1/200,可以忽略。同时为消除转动时匀速移动引起的运动模糊,转一圈的时间等于沿转动轴匀速移动一个成像宽度的时间,即πd/ω=w/υ(成像宽度d,扫描高度w,转速为ω,竖直运动速度υ)。Further, limiting the excitation time can be achieved by a pulsed light source with an appropriate pulse width, or a continuous light source can also be used for illumination by proper on-off modulation. But more efficiently, the continuous light source can also achieve short-term excitation of the point by scanning. A specific scanning method is shown in Figure 4, that is, the continuous light beam quickly scans on the photosensitive element of the camera, and the scanned photosensitive element starts at this time. Expose and record, scanning and exposure are synchronized until a frame is completed. An implementation manner is shown in FIG. 5 as an example, the field of view of the microscope, taking the imaging camera as a reference, and the width d is 2000 pixels. Correspondingly, the width of the line-shaped excitation light is about 10 pixels. When the excitation light sweeps across the entire field of view within 0.01 second, the actual time for each pixel to be excited is only about 0.01 second divided by 2000 times 10 or 50 microseconds. In order to realize the synchronization of rotation scanning and imaging, the motion blur caused by rotation during imaging can be eliminated. The number of pixels of the camera is 2000×2000, the pixel size is 6.5×6.5 microns, and the full-frame frame rate is 100Hz, that is, each frame is 10 milliseconds. The vibrating
在一个具体的实例中,按照上述扫描成像的方法,成像所依赖的衬度为荧光,转动机构的转速为3.6秒/转,沿转动轴向0.2μm/ms匀速移动对小鼠脑荧光成像,成像结果可参考图6所示的内容。其中,图6所展示的为每隔200ms,旋转20°选取的成像图,但是成像和运动是连续的。In a specific example, according to the above scanning imaging method, the contrast on which the imaging depends is fluorescence, the rotation speed of the rotating mechanism is 3.6 seconds/rev, and the mouse brain fluorescence imaging is performed by moving at a constant speed of 0.2 μm/ms along the rotation axis, The imaging results can refer to the content shown in Figure 6. Among them, Fig. 6 shows the imaging images rotated by 20° every 200ms, but the imaging and motion are continuous.
在一种实施方式中,成像样品所在环境填充有透明物质,所述透明物质与所述样品的折射率差值小于预设值。即选择与成像样品折射率近似的透明物质,可以减少折射光,使更多的光线进入镜头,提高分辨率。In one embodiment, the environment where the imaging sample is located is filled with a transparent substance, and the difference in refractive index between the transparent substance and the sample is smaller than a preset value. That is, choosing a transparent material with a refractive index similar to that of the imaging sample can reduce refracted light, allow more light to enter the lens, and improve resolution.
在一种实施方式中,所述照明装置1的激发光源为一个或多个发光二极管、连续激光器、脉冲激光器、X射线发生器中的至少一种。In one embodiment, the excitation light source of the illuminating
在一种实施方式中,所述被检测的衬度可以是荧光、弹性散射光、拉曼散射、二次谐波信号、三次谐波信号或受激拉曼散射信号的一种或多种。In one embodiment, the detected contrast may be one or more of fluorescence, elastic scattered light, Raman scattering, second harmonic signal, third harmonic signal or stimulated Raman scattering signal.
在一种实施方式中,照明装置使用脉冲时间小于或等于所述特定时间的脉冲,相应的,所述检测检测装置以矩阵感光器件作为成像器件。在所述特定时间内,由所述相对转动产生的位移不大于所述三维成像装置的分辨率。脉冲光源可包含一个或多个脉冲激光器、脉冲工作的发光二极管或者是以不同方法调制的连续光源的组合。且脉冲光源可与成像器件同步工作。In one embodiment, the illumination device uses pulses with a pulse time less than or equal to the specified time, and correspondingly, the detection device uses a matrix photosensitive device as an imaging device. During the specified time, the displacement caused by the relative rotation is not greater than the resolution of the three-dimensional imaging device. The pulsed light source may comprise one or more pulsed lasers, pulsed light-emitting diodes or a combination of continuous light sources modulated in different ways. And the pulse light source can work synchronously with the imaging device.
在一种实施方式中,所述扫描机构包含一个或多个扫描振镜(galvanometerscanner)、共振扫描镜、旋转多面镜、声光调制器的组合。In one embodiment, the scanning mechanism includes a combination of one or more galvanometer scanners, resonant scanning mirrors, rotating polygonal mirrors, and acousto-optic modulators.
在一种实施方式中,所述检测装置是以矩阵感光器件如CCD、CMOS相机作为成像器件,所述成像器件与所述扫描机构同步工作。所述检测装置可以包含以阵列或矩阵感光器件如LED阵列、CCD、CMOS相机作为成像器件。In one embodiment, the detection device uses a matrix photosensitive device such as a CCD or a CMOS camera as an imaging device, and the imaging device works synchronously with the scanning mechanism. The detection device may include array or matrix photosensitive devices such as LED arrays, CCD, CMOS cameras as imaging devices.
在一种实施方式中,所述照明装置可包含一个光束分割机构,用于将一个照明光束分割成多个照明光束,照明或激发待测样品的子区域,缩短整个样品总成像时间。所述光束分割机构可包含一个或多个透镜阵列、反射镜阵列、半透半反镜阵列的组合,或包含固定或可调的相位滤波器或数字微镜阵列(DMD)。In one embodiment, the illuminating device may include a beam splitting mechanism for splitting one illuminating beam into multiple illuminating beams to illuminate or excite sub-regions of the sample to be tested, so as to shorten the total imaging time of the entire sample. The beam splitting mechanism may comprise a combination of one or more lens arrays, mirror arrays, half-mirror arrays, or a fixed or adjustable phase filter or a digital micromirror array (DMD).
在一种实施方式中,所述照明装置和所述检测装置可包含一对共轭小孔,构成扫描共聚焦成像的结构。In one embodiment, the illuminating device and the detecting device may include a pair of conjugated small holes, forming a scanning confocal imaging structure.
在一种实施方式中,所述照明装置可包含至少一个波前传感器和波前校正器,用于校正待测区域照明光波前畸变,提高成像质量。In one embodiment, the illuminating device may include at least one wavefront sensor and a wavefront corrector, which are used to correct wavefront distortion of illumination light in the area to be measured and improve imaging quality.
本实施例的技术方案,通过在检测样品信号的过程中使样品与照明装置、检测装置进行匀速的螺旋运动,即在样品转动的同时进行连续信号采集,解决了三维成像过程中成像中断时间长,成像效率低的问题;可以实现减少三维成像过程中的成像中断,消除现有三维成像技术中成像时样品转动引起的模糊并改善像差。The technical solution of this embodiment solves the problem of long imaging interruption time in the process of three-dimensional imaging by making the sample, the illumination device, and the detection device perform uniform spiral motion during the process of detecting the sample signal, that is, performing continuous signal acquisition while the sample is rotating. , the problem of low imaging efficiency; it can reduce the imaging interruption during the three-dimensional imaging process, eliminate the blur caused by the sample rotation during imaging in the existing three-dimensional imaging technology, and improve the aberration.
在一个具体的实施例中,图7示出了对成像样品进行成像扫描的过程,在这一过程中,通过转动机构的匀速转动、竖直方向匀速直线移动以及水平方向移动,将样品全高的不同截面连续置于激发待测区域,最内侧成像直径为2d圆柱,外侧依次成像厚度为2d的空心圆管,由内及外、或由外及内,直到覆盖整个样品。样品被激发后,便可以利用检测装置检测其被照明装置照明或激发产生的信号,最后得到大样品的三维图像。在一种优选的实施方式中,可以通过转动机构控制样品的竖直方向速度,使成像面调制一个周期时,样品在所述相对转动的转轴方向上移动距离为扫描高度w,其中,d和w同图5中的成像宽度d和扫描高度w。In a specific embodiment, FIG. 7 shows the process of imaging and scanning the imaging sample. In this process, through the uniform rotation of the rotating mechanism, the uniform linear movement in the vertical direction and the horizontal movement, the full height of the sample is Different sections are continuously placed in the area to be tested, the innermost imaging diameter is a 2d cylinder, and the outermost imaging is a hollow tube with a thickness of 2d, from inside to outside, or from outside to inside, until the entire sample is covered. After the sample is excited, the detection device can be used to detect the signal generated by its illumination or excitation by the illumination device, and finally a three-dimensional image of the large sample can be obtained. In a preferred embodiment, the vertical speed of the sample can be controlled by the rotating mechanism, so that when the imaging surface is modulated for one cycle, the sample moves a distance of the scanning height w in the direction of the relative rotation axis, where d and w is the same as the imaging width d and scanning height w in Fig. 5.
针对同一种成像样品,在成像过程中,还可以采取如图8所示的移动轨迹。在图8成像过程中,通过转动机构匀速转动、水平方向匀速直线运动,先以螺旋形方式得到成像高度为w的圆柱;然后通过竖直方向移动,依次增加高度,直到得到整个样品三维图像。在一种优选的实施方式中,可以通过转动机构控制样品的水平方向速度,使成像面调制一个周期时,样品在水平方向移动距离为成像视野宽度d。For the same imaging sample, during the imaging process, the moving trajectory as shown in FIG. 8 can also be adopted. In the imaging process in Figure 8, through the uniform rotation of the rotating mechanism and the uniform linear motion in the horizontal direction, the cylinder with the imaging height w is obtained in a spiral manner; then the height is increased sequentially by moving in the vertical direction until the three-dimensional image of the entire sample is obtained. In a preferred embodiment, the horizontal speed of the sample can be controlled by the rotating mechanism, so that when the imaging surface is modulated for one cycle, the sample moves in the horizontal direction at a distance d of the imaging field of view.
进一步的,在成像过程中,还可以采取如图9所示的移动轨迹。在图9成像过程中,通过转动机构匀速转动,同时在水平方向移动以及竖直方向移动,先成像高度为扫描高度w的圆柱,然后通过水平方向移动,依次成像视野宽度d的环形区域;然后通过竖直方向移动,依次增加高度后再重复前述扫描与成像过程,直到得到整个样品三维图像。在一种优选的实施方式中,当成像面调制一个周期时,然后将样品在所述水平方向和竖直方向移动距离为成像视野宽度d。Further, during the imaging process, a moving trajectory as shown in FIG. 9 may also be adopted. In the imaging process in Figure 9, the rotation mechanism rotates at a constant speed while moving in the horizontal direction and the vertical direction. First, the cylinder whose height is the scanning height w is imaged, and then the circular area with the field of view width d is sequentially imaged by moving in the horizontal direction; and then By moving in the vertical direction, the height is increased sequentially, and then the aforementioned scanning and imaging process is repeated until a three-dimensional image of the entire sample is obtained. In a preferred embodiment, when the imaging surface is modulated for one period, then the sample is moved in the horizontal direction and the vertical direction by a distance of imaging field width d.
在本实施例中,照明装置、转动机构和检测装置同步工作,利用转动机构使成像样品与照明装置和检测装置产生相对转动,且相对转动为匀速运动,相对转动的轴方向分别与照明光路的主轴方向、检测光路的主轴方向垂直。在成像样品匀速旋转转动的同时进行信号的检测,即边转动边成像,从而可以减少成像中断。In this embodiment, the illuminating device, the rotating mechanism and the detecting device work synchronously, and the rotating mechanism is used to make the imaging sample rotate relative to the illuminating device and the detecting device, and the relative rotation is a uniform motion. The main axis direction and the main axis direction of the detection optical path are vertical. Signal detection is performed while the imaging sample is rotating at a constant speed, that is, imaging is performed while rotating, thereby reducing imaging interruption.
在另一种实施方式中,还可以采取限制激发时间的方法抑制运动模糊,其要点是保证样品中每一点在激发时间内的运动相对分辨率的要求可以忽略,即,激发时间乘以运动速度显著小于最小分辨的尺度即可。如果分辨要求为1微米,运动速度为1毫米每秒,则要求激发时间小于1毫秒。脉宽适当的脉冲光源可以直接满足这一要求。连续光源也可以通过适当的开关调制用来照明,但更高效的,连续光源也可以通过扫描方式实现对点的短时间激发。当运动模糊可忽略的时候,可在将衬度信号转为数字信号后,直接根据数字信号进行重构得到三维图像。成像获得的所有图像按照其所对应的样品空间位置进行排列放置,可以重建出样品的三维图像,如图10所示。In another embodiment, the method of limiting the excitation time can also be used to suppress motion blur, the main point of which is to ensure that the relative resolution of the motion of each point in the sample within the excitation time can be ignored, that is, the excitation time multiplied by the motion speed Significantly smaller than the minimum resolution scale. If the resolution requirement is 1 micron and the motion speed is 1 mm/s, the excitation time is required to be less than 1 millisecond. A pulsed light source with an appropriate pulse width can directly meet this requirement. CW light sources can also be modulated by appropriate switches for lighting, but more efficiently, CW light sources can also be scanned to achieve short-term excitation of points. When the motion blur is negligible, after the contrast signal is converted into a digital signal, the 3D image can be obtained by directly reconstructing the digital signal. All images obtained by imaging are arranged according to their corresponding sample spatial positions, and a three-dimensional image of the sample can be reconstructed, as shown in Figure 10.
实施例二Embodiment 2
本发明实施例二提供了一种三维成像方法,本实施例可适用于三维成像的情况,特别是对生物学与医学样品进行三维成像。Embodiment 2 of the present invention provides a three-dimensional imaging method, and this embodiment is applicable to three-dimensional imaging, especially for three-dimensional imaging of biological and medical samples.
三维成像方法包括如下步骤:The three-dimensional imaging method includes the following steps:
S110、控制至少一个照明装置,沿照明光路的主轴方向在样品检测区域内激发待测样品产生被检测的信号。S110. Control at least one illuminating device to excite the sample to be tested in the sample detection area along the main axis of the illumination light path to generate a detected signal.
当照明装置的光源发出照射光之后,待测样品在预设时间内被照明装置激发;在预设时间内,待测样品在相对转动过程中产生的位移分别小于或等于三维成像装置的纵向分辨率和横向分辨率。After the light source of the lighting device emits light, the sample to be tested is excited by the lighting device within a preset time; within the preset time, the displacement of the sample to be tested during the relative rotation process is less than or equal to the longitudinal resolution of the three-dimensional imaging device rate and horizontal resolution.
S120、控制至少一个检测装置,沿检测光路的主轴方向检测所述样品检测区域内产生的信号。S120. Control at least one detection device to detect signals generated in the sample detection area along the main axis direction of the detection optical path.
S130、控制至少一个转动机构,使所述待测样品在成像过程中,与所述照明装置和所述检测装置产生相对转动,并通过所述至少一个检测装置采集所述待测样品在不同待测区域产生的信号。S130. Control at least one rotating mechanism so that the sample to be tested rotates relative to the illuminating device and the detection device during the imaging process, and collect the sample to be tested at different positions through the at least one detection device. Signals generated in the measurement area.
具体的,上述步骤是适用于上述任一实施例中所描述的三维成像装置的。照明光路将照明光源以扫描光束的形式激发待测样品(即成像样品);检测光路的主轴与照明光路的主轴相交;转动机构沿与由照明光路的主轴和检测光路的主轴所在平面相平行或垂直的转轴转动;扫描光束的扫描方向与转轴方向平行或垂直。Specifically, the above steps are applicable to the three-dimensional imaging device described in any of the above embodiments. The illuminating light path excites the illuminating light source in the form of scanning light beams to excite the sample to be measured (i.e. the imaging sample); the main axis of the detection optical path intersects with the main axis of the illuminating optical path; The vertical shaft rotates; the scanning direction of the scanning beam is parallel to or perpendicular to the direction of the shaft.
在采集成像信号的过程中,会控制至少一个转动机构,使待测样品在成像过程中,与所述照明装置和所述检测装置产生相对转动,即控制至少一个转动机构,使待测样品在成像过程中连续转动,或者,直线运动及旋转运动组合的方式连续运动,与所述照明装置和所述检测装置产生相对转动。In the process of collecting imaging signals, at least one rotating mechanism will be controlled so that the sample to be tested will rotate relative to the illumination device and the detection device during the imaging process, that is, at least one rotating mechanism will be controlled to make the sample to be tested rotate in the imaging process. The continuous rotation during the imaging process, or the continuous movement in the form of a combination of linear motion and rotary motion, produces relative rotation with the illumination device and the detection device.
三维成像装置的照明装置、转动机构和检测装置同步工作,利用转动机构使成像样品与照明装置和检测装置产生相对转动,且相对转动为匀速运动,相对转动的轴方向分别与照明光路的主轴方向、检测光路的主轴方向垂直。在成像样品匀速旋转转动的同时进行信号的检测,即边转动边成像,从而可以减少成像中断。即在成像样品转动的过程中,进行信号的采集,然后将采集到的信号作为三维图像重构的依据。The illuminating device, the rotating mechanism and the detecting device of the three-dimensional imaging device work synchronously, and the imaging sample is relatively rotated with the illuminating device and the detecting device by using the rotating mechanism, and the relative rotation is a uniform motion. , The direction of the main axis of the detection optical path is vertical. Signal detection is performed while the imaging sample is rotating at a constant speed, that is, imaging is performed while rotating, thereby reducing imaging interruption. That is, during the rotation of the imaging sample, the signal is collected, and then the collected signal is used as the basis for three-dimensional image reconstruction.
进一步的,通过为转动机构设置不同的运动参数,会使成像样品产生不同的运动轨迹(可参考图7、图8和图9),即获取不同的成像数据,以得到最终的成像结果。Furthermore, by setting different motion parameters for the rotating mechanism, different motion trajectories of the imaging sample (refer to FIG. 7, FIG. 8 and FIG. 9) will be generated, that is, different imaging data will be obtained to obtain the final imaging result.
S140、将采集到的信号转为数字信号。S140. Convert the collected signal into a digital signal.
采集到的信号为电信号,需要进一步的转化为数字信号,以用于图像重建。The collected signal is an electrical signal, which needs to be further converted into a digital signal for image reconstruction.
S150、基于所述数字信号进行图像重建得到所述待测样本的三维图像。S150. Perform image reconstruction based on the digital signal to obtain a three-dimensional image of the sample to be tested.
具体的根据数据信号进行图像重建的过程,可采用任一预设的可实现三维重建的算法。在一种优选的实施方式中,还会对数字信号进行去噪处理,以消除成像过程中产生的运动伪影,得到更加清晰的成像结果。In the specific process of image reconstruction based on the data signal, any preset algorithm capable of realizing three-dimensional reconstruction may be used. In a preferred implementation manner, denoising processing is also performed on the digital signal to eliminate motion artifacts generated during the imaging process and obtain clearer imaging results.
本实施例的技术方案,通过利用上述实施例中的三维成像装置,在检测样品信号的过程中使样品与照明装置、检测装置进行匀速的螺旋运动,即在样品转动的同时进行连续信号采集,解决了三维成像过程中成像中断时间长,成像效率低的问题;可以实现减少三维成像过程中的成像中断,消除现有三维成像技术中成像时样品转动引起的模糊并改善像差。In the technical solution of this embodiment, by using the three-dimensional imaging device in the above embodiment, the sample, the lighting device, and the detection device perform a uniform spiral motion during the process of detecting the sample signal, that is, continuous signal acquisition is performed while the sample is rotating, The problem of long imaging interruption time and low imaging efficiency in the three-dimensional imaging process is solved; the imaging interruption in the three-dimensional imaging process can be reduced, the blur caused by the sample rotation during imaging in the existing three-dimensional imaging technology can be eliminated, and the aberration can be improved.
注意,上述仅为本发明的较佳实施例及所运用技术原理。本领域技术人员会理解,本发明不限于这里所述的特定实施例,对本领域技术人员来说能够进行各种明显的变化、重新调整和替代而不会脱离本发明的保护范围。因此,虽然通过以上实施例对本发明进行了较为详细的说明,但是本发明不仅仅限于以上实施例,在不脱离本发明构思的情况下,还可以包括更多其他等效实施例,而本发明的范围由所附的权利要求范围决定。Note that the above are only preferred embodiments of the present invention and applied technical principles. Those skilled in the art will understand that the present invention is not limited to the specific embodiments described herein, and that various obvious changes, readjustments and substitutions can be made by those skilled in the art without departing from the protection scope of the present invention. Therefore, although the present invention has been described in detail through the above embodiments, the present invention is not limited to the above embodiments, and can also include more other equivalent embodiments without departing from the concept of the present invention, and the present invention The scope is determined by the scope of the appended claims.
本领域普通技术人员应该明白,上述的本发明的各模块或各步骤可以用通用的计算装置来实现,它们可以集中在单个计算装置上,或者分布在多个计算装置所组成的网络上,可选地,他们可以用计算机装置可执行的程序代码来实现,从而可以将它们存储在存储装置中由计算装置来执行,或者将它们分别制作成各个集成电路模块,或者将它们中的多个模块或步骤制作成单个集成电路模块来实现。这样,本发明不限制于任何特定的硬件和软件的结合。Those of ordinary skill in the art should understand that each module or each step of the present invention described above can be realized by a general-purpose computing device, and they can be concentrated on a single computing device, or distributed on a network formed by multiple computing devices. Optionally, they can be implemented with executable program codes of computer devices, so that they can be stored in storage devices and executed by computing devices, or they can be made into individual integrated circuit modules, or a plurality of modules in them Or the steps are fabricated into a single integrated circuit module to realize. As such, the present invention is not limited to any specific combination of hardware and software.
注意,上述仅为本发明的较佳实施例及所运用技术原理。本领域技术人员会理解,本发明不限于这里所述的特定实施例,对本领域技术人员来说能够进行各种明显的变化、重新调整和替代而不会脱离本发明的保护范围。因此,虽然通过以上实施例对本发明进行了较为详细的说明,但是本发明不仅仅限于以上实施例,在不脱离本发明构思的情况下,还可以包括更多其他等效实施例,而本发明的范围由所附的权利要求范围决定。Note that the above are only preferred embodiments of the present invention and applied technical principles. Those skilled in the art will understand that the present invention is not limited to the specific embodiments described herein, and that various obvious changes, readjustments and substitutions can be made by those skilled in the art without departing from the protection scope of the present invention. Therefore, although the present invention has been described in detail through the above embodiments, the present invention is not limited to the above embodiments, and can also include more other equivalent embodiments without departing from the concept of the present invention, and the present invention The scope is determined by the scope of the appended claims.
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