CN102604948B - Separation and application of salicylic acid-induced citrus sinensis osbeck promoter GSTU19P - Google Patents
Separation and application of salicylic acid-induced citrus sinensis osbeck promoter GSTU19P Download PDFInfo
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Abstract
Description
技术领域 technical field
本发明属于植物基因工程技术领域。具体涉及一个红肉脐橙中水杨酸(SA)诱导型启动子,GSTU19基因启动子的克隆及空间表达。该启动子的分离为农业生产和生物学研究提供一个可控的表达调控元件。所述的诱导型启动子在植物抵抗胁迫和次级代谢等生理过程中发挥着重要作用。The invention belongs to the technical field of plant genetic engineering. It specifically relates to the cloning and spatial expression of a salicylic acid (SA)-inducible promoter and a GSTU19 gene promoter in navel orange. The isolation of the promoter provides a controllable expression regulatory element for agricultural production and biological research. The inducible promoter plays an important role in physiological processes such as plant resistance to stress and secondary metabolism.
背景技术 Background technique
农业是一个国家的基础产业,在世界人口不断增长的情况下,粮食的供给变得尤为重要。传统农业增产主要靠施肥和施用农药除草除虫,这样不仅增加了农产品的成本,还给环境带来很大的负担。现在农作物品质的改良越来越依赖于不断发展的分子生物学技术。许多基因资源都已成为转基因技术改良作物品种的重要武器,但是这些基因在转基因植株中多使用组成型的启动子驱动其表达,这种表达方式由于违背了植物的自然生理活动规律,不仅达不到转基因的预期目的,甚至可能对转基因植物自身的生理活动造成极大伤害。如抗病基因Pto在西红柿中的超量表达(Li,et al.2002)和拟南芥中抗病相关基因NPR1基因的超量表达(Blanco,et al.2005)都对转基因植物的生长造成了副作用,出现了假病斑以及植物矮小等现象。基于转基因对植物生长的影响及安全性的考虑,人们希望在转基因的同时可以有足够的安全保障,于是利用诱导型的以及不在食用部位表达的启动子驱动外源基因的表达成为最佳选择。Agriculture is a country's basic industry, and the supply of food has become particularly important as the world's population continues to grow. Traditional agricultural production mainly depends on fertilization and pesticide weeding and pest control, which not only increases the cost of agricultural products, but also brings a great burden to the environment. The improvement of crop quality is now more and more dependent on the continuous development of molecular biology techniques. Many genetic resources have become an important weapon for the improvement of crop varieties by transgenic technology, but these genes are often expressed by constitutive promoters in transgenic plants. This expression method violates the natural physiological activity rules of plants and not only fails to achieve the desired results. If the intended purpose of the transgene is reached, it may even cause great harm to the physiological activities of the transgenic plant itself. For example, the overexpression of the disease resistance gene Pto in tomato (Li, et al.2002) and the overexpression of the disease resistance-related gene NPR1 in Arabidopsis (Blanco, et al.2005) both have adverse effects on the growth of transgenic plants. There are side effects, such as false lesions and short plants. Based on the impact of transgenes on plant growth and safety considerations, people hope to have sufficient safety guarantees while transgenic, so it is the best choice to use inducible promoters and promoters that are not expressed in edible parts to drive the expression of foreign genes.
基因成功转录,需要启动子、RNA聚合酶、转录因子等一系列因素一起参与。真核生物中的TATA和CAAT框,它们决定了转录的起始位点和效率,负责和RNA聚合酶结合,启动基本转录过程。而其它的驱动基因在特定的时间和空间表达的组成元件被称为顺式作用元件。驱动特异性表达的顺式元件的结构由于功能的不同而各不相同,无法给出一个统一的结构,这些元件的结构可能有其自身的特点,它们对基因的特异性表达起到了决定性的作用。这些特异性元件的存在给特异性启动子的分离带来了一定的难度,但正是这些功能区决定了启动子的特异性。The successful transcription of genes requires the participation of a series of factors such as promoters, RNA polymerases, and transcription factors. The TATA and CAAT boxes in eukaryotes determine the initiation site and efficiency of transcription, and are responsible for binding to RNA polymerase to initiate the basic transcription process. Other components that drive gene expression in specific time and space are called cis-acting elements. The structures of cis-elements driving specific expression vary due to different functions, and a unified structure cannot be given. The structures of these elements may have their own characteristics, and they play a decisive role in the specific expression of genes . The existence of these specific elements brings certain difficulties to the isolation of specific promoters, but it is these functional regions that determine the specificity of the promoter.
谷胱甘肽转移酶(GSTs)是生物体内广泛存在的一类可溶性蛋白,它们由一个庞大的基因家族编码。根据它们的基因序列特征可以把GSTs分为七大类:Phi、Tau、Theta、Zeta、Lambda、DHAR(脱氢抗坏血酸)和TCHQD(四氯对苯二酚脱卤素酶)。其中Tau类GSTs(GSTU)是植物特有的,并且在抵抗胁迫和次级代谢等生理过程中发挥着重要作用。前人研究发现GST是受多种因素诱导的,水杨酸就是其中之一。水杨酸(salicylic acid,SA)是植物体内含量较低的一种内源酚类小分子化合物(Raskin 1992),单子叶植物体内的含量较双子叶植物的高(Raskin,et al.1990)。SA在植物中具有重要的生理作用,包括影响气孔开闭、种子萌发、果实产量、离子吸收、产热、开花、性别分化和抑制乙烯的生物合成等,因而SA及其盐类被认为是一类具有重要应用价值的植物激素。SA能诱导多种植物对病毒、真菌及细菌病害产生抗性(范志金,et al.2004)。SA也是诱发系统获得性抗性(systemic acquired resistance,SAR)的信号分子之一(Yalpani andRaskin 1993),涉及并参与植物的过敏反应(hypersensitive reaction,HR)和SAR反应,在植物的SAR信号转导中起着关键作用。SA作为植物激素和信号分子,直接或间接调控植物体发育过程中相关基因的表达。Glutathione transferases (GSTs) are a class of soluble proteins that exist widely in organisms, and they are encoded by a large gene family. According to their gene sequence characteristics, GSTs can be divided into seven categories: Phi, Tau, Theta, Zeta, Lambda, DHAR (dehydroascorbic acid) and TCHQD (tetrachlorohydroquinone dehalogenase). Among them, Tau-like GSTs (GSTU) are unique to plants and play important roles in physiological processes such as stress resistance and secondary metabolism. Previous studies have found that GST is induced by many factors, and salicylic acid is one of them. Salicylic acid (SA) is an endogenous phenolic small molecule compound with low content in plants (Raskin 1992), and the content in monocotyledonous plants is higher than that in dicotyledonous plants (Raskin, et al.1990) . SA has important physiological functions in plants, including affecting the opening and closing of stomata, seed germination, fruit production, ion absorption, heat production, flowering, sex differentiation and inhibition of ethylene biosynthesis, etc. Therefore, SA and its salts are considered to be a Plant hormones with important application value. SA can induce a variety of plants to develop resistance to viruses, fungi and bacterial diseases (Fan Zhijin, et al.2004). SA is also one of the signaling molecules that induce systemic acquired resistance (SAR) (Yalpani and Raskin 1993), and is involved in and involved in plant hypersensitive response (hypersensitive reaction, HR) and SAR response, and in plant SAR signal transduction plays a key role in. As a plant hormone and signaling molecule, SA directly or indirectly regulates the expression of related genes during plant development.
从以上的研究结果可知GSTs基因在抵抗胁迫和次级代谢等生理过程中发挥着重要作用,SA可诱导GSTs基因早期启动和表达,目前已经分离出几个受SA间接调控的顺式作用元件。同时水杨酸是植物体内的一类小分子物质,被认为是一种新的植物激素。从生物安全性角度考虑,此类启动子被用于大田使用的前景乐观。本发明以红肉脐橙为材料,用水杨酸对叶片进行处理,分离克隆上调表达的GSTU19基因,采用染色体步移的方法分离其启动子。通过启动子元件分析软件扫描,确定该启动子序列中诱导表达相关的调控元件,进而构建该启动子的3个缺失序列表达载体,采用农杆菌介导的真空渗透法、原生质体瞬时表达进行功能验证,得出GSTU19基因启动子在-700bp至-300bp序列内含有水杨酸诱导相关元件,其启动子为SA诱导的诱导型启动子。From the above research results, it can be seen that GSTs genes play an important role in physiological processes such as resistance to stress and secondary metabolism. SA can induce the early activation and expression of GSTs genes. Several cis-acting elements indirectly regulated by SA have been isolated. At the same time, salicylic acid is a class of small molecular substances in plants, and is considered to be a new plant hormone. From the perspective of biosafety, the prospect of such promoters being used in field is optimistic. In the invention, the navel orange is used as the material, the leaves are treated with salicylic acid, the up-regulated GSTU19 gene is isolated and cloned, and its promoter is isolated by a chromosome walking method. Through the scanning of the promoter element analysis software, the regulatory elements related to the induction of expression in the promoter sequence were determined, and then the expression vector of the three deletion sequences of the promoter was constructed, and the function was performed by vacuum infiltration method mediated by Agrobacterium and transient expression in protoplasts After verification, it was concluded that the promoter of GSTU19 gene contained salicylic acid-inducible related elements in the -700bp to -300bp sequence, and its promoter was an inducible promoter induced by SA.
发明内容 Contents of the invention
本发明目的就是从红肉脐橙中分离出受水杨酸(SA)诱导调控的诱导型启动子。从而进一步为作物的品种改良、提高植物的抗逆性提供有用的基因资源。用水杨酸处理红肉脐橙叶片后,GSTU19基因上调表达显著,继而分离该基因的启动子(GSTU19P),通过构建载体转化拟南芥,拟南芥原生质体都能够诱导其表达,因此该启动子有可能在大田农作物上取得重要的应用。The purpose of the present invention is to isolate an inducible promoter regulated by salicylic acid (SA) from red navel orange. In this way, useful gene resources are further provided for crop variety improvement and plant stress resistance. After salicylic acid was used to treat navel orange leaves, the expression of the GSTU19 gene was significantly up-regulated, and then the promoter of the gene (GSTU19P) was isolated and transformed into Arabidopsis by constructing a vector. Arabidopsis protoplasts could induce its expression, so the promoter There is potential for important applications in field crops.
本发明通过以下技术方案实现:The present invention is realized through the following technical solutions:
申请人通过基因克隆技术从脐橙中分离得到一个水杨酸诱导后表达上调的GSTU19基因的启动子,其核苷酸序列如序列表SEQ NO:1所示,序列长度为2072bp。申请人将这个启动子命名为GSTU19P。The applicant isolated a promoter of the GSTU19 gene whose expression was upregulated after being induced by salicylic acid from navel orange by gene cloning technology. Its nucleotide sequence is shown in the sequence table SEQ NO: 1, and the sequence length is 2072bp. Applicants named this promoter GSTU19P.
本发明所述启动子GSTU19P受水杨酸诱导表达。红肉脐橙GSTU19基因受水杨酸的诱导表达,因此使用染色体步移的方法克隆了GSTU19基因的启动子GSTU19P,通过生物信息学分析发现GSTU19P启动子中存在着多种与水杨酸诱导相关的元件,如被WRKY转录因子所结合的W-box、能被bZIP类蛋白所识别的ACGT元件以及ARR1结合元件等。该启动子在拟南芥原生质体中的瞬时表达和水杨酸诱导处理实验结果也显示,GSTU19P启动子不论是驱动GFP还是GUS的表达都受水杨酸诱导影响。表明本发明的GSTU19P为水杨酸诱导型启动子。The promoter GSTU19P of the present invention is induced to express by salicylic acid. The expression of GSTU19 gene in red navel orange is induced by salicylic acid, so the promoter GSTU19P of GSTU19 gene was cloned by chromosome walking method. Through bioinformatics analysis, it was found that there were a variety of genes related to salicylic acid induction in the GSTU19P promoter. Elements, such as W-box bound by WRKY transcription factors, ACGT elements recognized by bZIP-like proteins, and ARR1 binding elements. The transient expression of this promoter in Arabidopsis protoplasts and the results of salicylic acid-induced treatment experiments also showed that whether the GSTU19P promoter drives the expression of GFP or GUS is affected by salicylic acid induction. It shows that GSTU19P of the present invention is a salicylic acid-inducible promoter.
获得本发明所示启动子的主要步骤如下:The main steps for obtaining the promoter shown in the present invention are as follows:
(1)设置水杨酸(SA)处理浓度的梯度,选择合适的SA浓度处理红肉脐橙叶片。(1) Set the gradient of salicylic acid (SA) treatment concentration, and select the appropriate SA concentration to treat the leaves of navel orange.
(2)通过荧光定量PCR筛选上调基因。(2) Screen up-regulated genes by fluorescent quantitative PCR.
(3)利用染色体步移技术克隆GSTU19P启动子的核苷酸序列。(3) The nucleotide sequence of GSTU19P promoter was cloned by chromosome walking technique.
(2)利用生物信息学方法分析该启动子结构。(2) Analyze the structure of the promoter using bioinformatics methods.
(4)构建GSTU19P表达载体并转化拟南芥。(4) Construct GSTU19P expression vector and transform Arabidopsis.
(5)对转基因拟南芥进行抗性筛选及移栽。(5) Resistance screening and transplanting of transgenic Arabidopsis thaliana.
(6)对阳性植株进行GUS活性检测。(6) GUS activity detection was carried out on the positive plants.
(7)对拟南芥的原生质体进行瞬时表达转化。(7) Transient expression transformation of Arabidopsis protoplasts.
本发明克隆的GSTU19P启动子可进一步为植物的品遗传改良,提高植物的抗逆性提供有用的基因资源。本发明启动子应用还包括通过对水杨酸的响应调控红肉脐橙抵抗胁迫或次级代谢。The GSTU19P promoter cloned in the invention can further provide useful gene resources for genetic improvement of plant strains and improvement of stress resistance of plants. The application of the promoter of the present invention also includes regulating the resistance of navel orange to stress or secondary metabolism through the response to salicylic acid.
更详细的技术发明细节由以下实施例给出,但并不是限制该发明的保护范围:More detailed technical details of the invention are provided by the following examples, but are not intended to limit the protection scope of the invention:
附图说明 Description of drawings
序列表SEQ ID NO:1是本发明分离克隆的GSTU19P启动子的核苷酸序列。Sequence listing SEQ ID NO: 1 is the nucleotide sequence of the GSTU19P promoter isolated and cloned in the present invention.
图1:本发明的技术路线图。Figure 1: The technical roadmap of the present invention.
图2:不同浓度水杨酸处理红肉脐橙叶片的形态(处理后7天的情况)。图中:CK,为对照,即纯水处理;1为10mmol/L SA处理;2为5mmol/L SA处理。Figure 2: Morphology of navel orange leaves treated with different concentrations of salicylic acid (7 days after treatment). In the figure: CK is the control, namely pure water treatment; 1 is 10mmol/L SA treatment; 2 is 5mmol/L SA treatment.
图3:实时定量PCR检测SA处理后GSTU19基因表达情况。图中:蓝色表示水处理组样品;紫色表示5mmol/LSA处理组样品;数字分别表示处理后再采样的时间点。Figure 3: Real-time quantitative PCR detection of GSTU19 gene expression after SA treatment. In the figure: blue indicates water treatment group samples; purple indicates 5mmol/LSA treatment group samples; numbers indicate time points of re-sampling after treatment.
图4:采用PLACE软件(公开使用软件)分析GSTU19P结构。Figure 4: Analysis of GSTU19P structure using PLACE software (open access software).
图5:构建缺失片段验证GSTU19P序列缺失片段示意图。Figure 5: Schematic diagram of constructing missing fragments to verify GSTU19P sequence missing fragments.
图6:本发明的表达载体pCAMBIA1391+GSTU19P和pCAMBIA1301+GSTU19P载体的构建示意图。Figure 6: Schematic diagram of the construction of the expression vectors pCAMBIA1391+GSTU19P and pCAMBIA1301+GSTU19P vectors of the present invention.
图7:本发明的表达载体pCAMBIA1302+GSTU19P载体的构建示意图。Figure 7: Schematic diagram of the construction of the expression vector pCAMBIA1302+GSTU19P vector of the present invention.
图8:启动子缺失载体连GFP转化拟南芥原生质体检测启动子响应SA活性。Figure 8: Protoplasts of Arabidopsis thaliana transformed with promoter-deleted vectors and GFP to detect promoter response to SA activity.
图9:启动子缺失载体连GUS转化拟南芥原生质体检测启动子响应SA活性。Figure 9: Protoplasts of Arabidopsis thaliana transformed with promoter-deleted vector and GUS to detect promoter response to SA activity.
具体实施方式 Detailed ways
实施例1水杨酸诱导候选基因的选择及分离Example 1 Selection and isolation of salicylic acid-induced candidate genes
本实施例使用0mmol/L、1mmol/L、5mmol/L、10mmol/L 4个浓度的水杨酸来处理成年期红肉脐橙(品种为”早红”,来自华中农业大学柑橘种植资源圃,该品种已经被授予中国植物品种权,品种权号为CN20060194.6,授权日:2008年5月1日)的新梢叶片。每两株为一个重复。处理时间在上午8时。每天观察,一周后观察叶片情况,研究确定了5mmol/L SA为处理红肉脐橙树体的浓度(见图2)。This embodiment uses 0mmol/L, 1mmol/L, 5mmol/L, 4 concentrations of 10mmol/L salicylic acid to process adult red navel orange (kind is " early red ", from Huazhong Agricultural University citrus planting resource nursery, This kind has been awarded the Chinese plant variety right, the variety right number is CN20060194.6, the date of authorization: on May 1, 2008). Every two plants constituted a replicate. Processing time is 8:00 am. Observe every day, observe the leaf situation after one week, research has determined that 5mmol/L SA is the concentration (seeing Fig. 2) that handles red navel orange tree body.
以GSTU为关键词搜索柑桔EST数据库(HarvEST:Citrus ver.0.51),得到5个相近序列,这些由DNAstar(公用软件)组成一个unigene,利用该序列用Primer Premier 5.0设计引物,用RT-PCR方法扩出全长。5mmol/L SA处理红肉脐橙叶片抽提RNA及反转录,所得的第一链cDNA用于扩增GSTU19基因全长。RNA抽提使用Trizol试剂盒(购自Invitrogen公司,按照该试剂盒提供的操作说明书操作),利用抽提的3μg总RNA样品经1U的DNaseI(Amplification Grade,购自Invitrogen公司)室温处理15分钟后,加入1μl EDTA(25mM),于65℃温育10分钟。第一链cDNA的合成用MBI反转录试剂盒(货号:K1621,购自Fermentas公司,按照试剂盒说明书操作)。扩增基因GSTU19引物对为:Forward,5’-TTCTGTCACAATGGCGGACG-3’;反向引物:5’-GGAATAAGCAGGCAGCACGA-3’。25μl的反应体系中包括100ng cDNA,1×缓冲液,2.5mM MgCl2,0.25mM dNTP,0.5U Taq聚合酶(前述缓冲液和Taq聚合酶购自Fermentas公司,Lithuania)加0.5μM上述引物。PCR反应在ABI 9700(Applied Biosystem)扩增仪上按以下程序完成:94℃,5分钟,94℃变性30秒,60℃退火50秒,72℃延伸90秒,35个循环;循环完成后72℃延伸15分钟。产生一条单一PCR条带产物,经1%的琼脂糖凝胶电泳后,用DNA凝胶回收试剂盒(购自Omega公司,美国)回收特异带,提取步骤参照使用说明。回收纯化的DNA溶液与pMD18-T载体(购自宝生物工程大连有限公司即TaKaRa公司)进行连接反应,按说明书操作,连接反应体系中插入GSTU19基因与pMD18-T载体的摩尔比为3∶1连接反应总体积是10μl,其中包括5μl的2×缓冲液(购自宝生物工程大连有限公司),4.5μl纯化的PCR产物,0.5μl T载体。16℃过夜连接。取10μl连接产物,采用热击法(Sambrook,et al.2002)转化大肠杆菌DH5α,在含有50mg/L氨苄霉素的LB固体平板中筛选阳性克隆,挑取5个克隆测序(由上海联合基因公司完成),测序结果表明,本发明克隆GSTU19基因全长为1060bp(见SEQ ID NO:2所示)。为分析GSTU19基因是否对水杨酸的处理响应,采用实时定量PCR分析该基因在水杨酸不同处理下的表达。结果表明,GSTU19表达量却在4小时内快速上升,且在8小时时达到最高点,是初始状态的9倍多(图3),表明它是一个水杨酸应答候选基因。Search the citrus EST database (HarvEST: Citrus ver.0.51) with GSTU as the keyword, and get 5 similar sequences, which are composed of DNAstar (public software) to form a unigene, use the sequence to design primers with Primer Premier 5.0, and use RT-PCR Method extends full-length. 5mmol/L SA treated navel orange leaves to extract RNA and reverse transcribe, and the obtained first-strand cDNA was used to amplify the full length of GSTU19 gene. RNA was extracted using a Trizol kit (purchased from Invitrogen, operated according to the operating instructions provided by the kit), and the extracted 3 μg total RNA sample was treated with 1 U of DNaseI (Amplification Grade, purchased from Invitrogen) for 15 minutes at room temperature. , add 1 μl EDTA (25 mM), and incubate at 65° C. for 10 minutes. The first-strand cDNA was synthesized using an MBI reverse transcription kit (product number: K1621, purchased from Fermentas, operated according to the instructions of the kit). Amplified gene GSTU19 primer pair: Forward, 5'-TTCTGTCACAATGGCGGACG-3'; Reverse primer: 5'-GGAATAAGCAGGCAGCACGA-3'. The 25 μl reaction system included 100 ng cDNA, 1× buffer, 2.5
实施例2GSTU19启动子的克隆和生物信息学分析Cloning and bioinformatics analysis of embodiment 2GSTU19 promoter
采用染色体步移方法获得GSTU19基因的启动子(GenomeWalkerTM Universal Kit,Clontech,USA),根据HarvEST-citrus数据库中柑橘的GSTU19cDNA序列,以其为模板设计两条反义引物:GSP1和GSP2,两条正义引物AP1和AP2(见表2),以GSP1和AP1为一对引物,按照表1的反应条件,进行第一轮PCR反应。PCR体系为:2.5μl 10×LA Taq Buffer,0.5μl 10mM dNTP,0.5μl 10μM GSP1和AP1引物,1U LA Taq酶,0.5μl DNA,加去离子水补至25μl。为增加反应的专一性,采用第一轮的PCR产物稀释50倍后为模板,以GSP2和AP2为引物对,采用巢式PCR进行第二轮的扩增。PCR反应体系为:2.5μl 10×LA Taq Buffer,0.5μl 10mM dNTP,0.5μl 10μM GSP2和AP2引物,1U LA Taq酶,0.5μl DNA,加去离子水补至25μl。The promoter of GSTU19 gene (GenomeWalkerTM Universal Kit, Clontech, USA) was obtained by chromosome walking method, and two antisense primers were designed according to the GSTU19 cDNA sequence of citrus in the HarvEST-citrus database: GSP1 and GSP2, and two sense primers Primers AP1 and AP2 (see Table 2), with GSP1 and AP1 as a pair of primers, according to the reaction conditions in Table 1, the first round of PCR reaction was performed. The PCR system is: 2.5μl 10×LA Taq Buffer, 0.5μl 10mM dNTP, 0.5μl 10μM GSP1 and AP1 primers, 1U LA Taq enzyme, 0.5μl DNA, add deionized water to make up to 25μl. In order to increase the specificity of the reaction, the PCR product of the first round was diluted 50 times as the template, and GSP2 and AP2 were used as the primer pair, and the second round of amplification was carried out by nested PCR. The PCR reaction system is: 2.5μl 10×LA Taq Buffer, 0.5μl 10mM dNTP, 0.5μl 10μM GSP2 and AP2 primers, 1U LA Taq enzyme, 0.5μl DNA, add deionized water to make up to 25μl.
表1PCR反应条件Table 1 PCR reaction conditions
PCR结束后,利用1%的琼脂糖凝胶电泳检测PCR产物,利用DNA凝胶回收试剂盒(购自Omega公司,美国)回收特异带,提取步骤参照使用说明。回收纯化的DNA溶液与pMD18-T载体(购自宝生物工程大连有限公司即TaKaRa公司)进行连接反应,按说明书操作,连接反应体系中回收片段与pMD18-T载体的摩尔比为3∶1连接反应总体积是10μl,其中包括5μl的2×缓冲液(购自宝生物工程大连有限公司),4.5μl纯化的PCR产物,0.5μl T载体。16℃过夜连接。取10μl连接产物,采用热击法(Sambrook,et al.2002)转化大肠杆菌DH5α,在含有50mg/L氨苄霉素的LB固体平板中筛选阳性克隆,挑取5个克隆测序(由上海联合基因公司完成)。本发明克隆GSTU19P全长序列为2072bp(见SEQ ID NO:1所示)。使用PLACE(http://www.dna.affrc.go.jp/PLACE/signalscan.html)在线软件(Higo,et al.1998)分析GSTU19P的2072bp的序列,发现靠近3’端具有许多TATA-box和CAAT-box元件,且在-200bp内有三个GATA-box(见图4)。在-300bp内存在一类诱导性元件——TGAC。TGAC是W-box的核心元件(见图4),W-box是WRKY转录因子所特异识别的结合位点,存在于许多胁迫诱导基因和病程相关蛋白(PR)的启动子中(Xie,et al.2005)。还有ocs元件(TGACG),是存在于许多GST启动子且与水杨酸诱导相关的诱导元件(Chen andSingh 1999)。在-1000bp以外的启动子远端还存在着许多诱导性的启动子元件(见图4),诸如ARR1-bindingelement、GTAC(GTAC是CuRE(铜响应元件)的核心序列)(Quinn,et al.2002)、TTATCC(一种糖效应元件(SRE))(Tatematsu,et al.2005)、还有许多MYB类蛋白的识别位点(见图4)。After PCR finishes, utilize 1% agarose gel electrophoresis to detect PCR product, utilize DNA gel recovery kit (purchased from Omega, USA) was used to recover specific bands, and the extraction steps refer to the instructions for use. The recovered and purified DNA solution was ligated with the pMD18-T vector (purchased from Treasure Bioengineering Dalian Co., Ltd., namely TaKaRa Company), and operated according to the instructions. In the ligation reaction system, the molar ratio of the recovered fragments to the pMD18-T vector was 3:1 The total reaction volume was 10 μl, including 5 μl of 2× buffer solution (purchased from Treasure Bioengineering Dalian Co., Ltd.), 4.5 μl of purified PCR product, and 0.5 μl of T vector. Ligate overnight at 16°
实施例3利用GSTU19P启动子对拟南芥进行遗传转化Embodiment 3 utilizes GSTU19P promoter to carry out genetic transformation to Arabidopsis
1)载体构建:为了验证GSTU19P的空间表达,根据pCAMBIA1391载体(从澳大利亚的CAMBIA实验室购买)的多克隆位点和GSTU19P序列,按照一般设计引物的原则用Primer Premier 5.0软件设计出扩增设计3个片段大小不同的载体(图5和图6)分别是329bp(编号为Del 1),702bp(编号为Del 2)、1856bp(编号为Full-length,)。Del1构建载体的引物为F1和R1,Del2构建载体的引物为F2和R1,Full-length构建载体的引物为F3和R1(见表2)。以红肉脐橙(品种为“早红”)的DNA为模板进行PCR扩增,DNA的提取方法按照程运江报道的方法(Cheng,et al.2003)。PCR扩增的退火温度为60℃。PCR反应条件为:95℃,5min;95℃,30s;56℃,30s;72℃,90s;72℃,10min。35个循环。双酶切体系:反应总体积为20μl,其中含有PCR的纯化产物10μl,10×G缓冲液(购自MBI公司)2μl,EcoR I及Sal1各1μl,双蒸水6μl。在37℃酶切过夜后纯化回收。pCAMBIA1391载体的双酶切体系:反应总体积为20μl,其中含有经过质粒提取获得的pCAMBIA1391载体DNA 8μl,10×G缓冲液(购自MBI公司)2μl,EcoR I及Sal1各1μl,加双蒸水8μl。于37℃酶切过夜后纯化回收。连接反应体系中插入GSTU19P的不同片段与载体pCAMBIA1391的摩尔比为3∶1,反应总体积为10μl,其中含有10×Buffer 1μl,T4DNA连接酶1μl,GSTU19P的双酶切回收产物4μl,pCAMBIA1391载体的双酶切回收产物2μl,双蒸水2μl。在16℃反应14-16小时。连接产物转化大肠杆菌菌株DH5α,在含有50mg/L卡那霉素的LB固体平板中筛选阳性克隆,抽提质粒进行酶切及PCR鉴定,测序确定没有突变,获得含有插入目的片段的重组克隆,将其命名为pCAMBIA1391-Full-length,pCAMBIA1391-Del1,pCAMBIA1391-Del2重组载体,应用冻融法(Sambrook,etal.2002)将重组载体pCAMBIA1391系列导入到农杆菌EHA105中。1) Vector construction: In order to verify the spatial expression of GSTU19P, according to the multiple cloning site and GSTU19P sequence of the pCAMBIA1391 vector (purchased from CAMBIA Laboratory in Australia), the amplification design was designed with Primer Premier 5.0 software according to the general principle of primer design 3 Vectors with different fragment sizes (Figure 5 and Figure 6) are 329bp (numbered as Del 1), 702bp (numbered as Del 2), and 1856bp (numbered as Full-length, respectively). The primers for the construction of the Del1 vector are F1 and R1, the primers for the construction of the Del2 vector are F2 and R1, and the primers for the construction of the Full-length vector are F3 and R1 (see Table 2). Carry out PCR amplification with the DNA of red meat navel orange (kind is " early red ") as template, and the extraction method of DNA is according to the method (Cheng, et al.2003) reported by Cheng Yunjiang. The annealing temperature for PCR amplification was 60°C. The PCR reaction conditions are: 95°C, 5min; 95°C, 30s; 56°C, 30s; 72°C, 90s; 72°C, 10min. 35 cycles. Double enzyme digestion system: the total reaction volume is 20 μl, which contains 10 μl of purified PCR product, 2 μl of 10×G buffer (purchased from MBI Company), 1 μl of EcoR I and Sal1, and 6 μl of double distilled water. Purify and recover after enzyme digestion at 37°C overnight. Double enzyme digestion system of pCAMBIA1391 vector: the total reaction volume is 20 μl, which contains 8 μl of pCAMBIA1391 vector DNA obtained through plasmid extraction, 2 μl of 10×G buffer (purchased from MBI Company), 1 μl of EcoR I and Sal1, and double distilled
2)拟南芥的转化:采用花序侵染法(Zhang,et al.2006)转化拟南芥:待拟南芥植株长至8~15cm出现较多花序时即可进行侵染。将带有目的片段(pCAMBIA1391-Full-length,pCAMBIA1391-Del1,pCAMBIA1391-Del2)的农杆菌(EH105),接种到3mL液体LB培养基中,28℃,250r/min,摇菌24h。接种1mL过夜培养液到250mL含100mL液体LB培养基中,28℃,250r/min,摇菌,直至对数生长期OD600=0.8~1.6。培养菌液分装至50mL离心管中,4000r/min,15min离心收集菌体。加入5%蔗糖重悬菌体,轻轻反复吸打将菌体分散成单个细胞,转化前加入0.05%Sillwet L-77。将拟南芥花序蘸到含农杆菌的菌液中30sec~2min,侵染后的拟南芥暗培养24h后,转入正常生长。待拟南芥种子成熟后即可分批采收,收获的种子放在2mL离心管中,4℃保存。首先加热溶解固体1/2MS培养基,待培养基温度降至60℃以下,加入50mg/mill羧苄青霉素和50mg/mL潮霉素B,使终浓度为75mg/L羧苄青霉素和75mg/L潮霉素B。混匀后铺在平皿上,在超净工作台上吹半小时以上。先用70%酒精浸泡拟南芥种子1min,再用2%次氯酸钠溶液消毒种子4~5min,无菌水洗涤3~4次,用灭过菌的0.1%琼脂悬浮培养拟南芥种子,用移液器反复吸打均匀播在抗性平板上。用Parafilm膜封口,在25℃的温度条件,相对湿度在75%至80%之间,每天16个小时的光照。当真叶长至4~5片时,洗掉根上残留培养基,移栽到培蕾基质中(浙江的培蕾公司),盖膜2d保湿,随后可根据实验需要进行后续实验。植株成熟后分株收获种子。Del1和Del2分别得到10株和15株经PCR鉴定的T1代转基因阳性苗,用相同的筛选方法筛选T2代抗性苗,用T2代阳性苗分析启动子表达模式。2) Transformation of Arabidopsis thaliana: Inflorescence infection method (Zhang, et al. 2006) was used to transform Arabidopsis thaliana: when the Arabidopsis plants grew to 8-15 cm and more inflorescences appeared, the infection could be carried out. Inoculate Agrobacterium (EH105) with the target fragment (pCAMBIA1391-Full-length, pCAMBIA1391-Del1, pCAMBIA1391-Del2) into 3 mL liquid LB medium, shake the bacteria for 24 hours at 28°C and 250 r/min.
3)结果分析:通过对阳性苗进行GUS组织染色。结果呈现出GUS基因在GSTU19P启动子的不同片段长度的驱动下在第一对叶片以及茎的底部表达较强,且各个片断都能对SA的诱导响应。其中Del 2阳性苗的成熟叶叶尖表达也很强。缺失启动子Del 1在处理前后表达都很强,说明-300bp的启动子片段就已经有很强的启动转录的功能。对于Del 2,虽然也有比较强的表达,可以看到Del 2的茎部没有GUS基因表达与Del 1和Full-length相比较,这个现象可能是因为在GSTU19P启动子序列的700bp-300bp之间存在着控制组织特异性表达的元件3) Result analysis: through GUS tissue staining of positive seedlings. The results showed that GUS gene was strongly expressed in the first pair of leaves and the bottom of the stem driven by different fragment lengths of the GSTU19P promoter, and each fragment could respond to the induction of SA. Among them, the mature leaf tips of
实施例4利用GSTU19P启动子对拟南芥叶肉原生质体转化瞬时表达Example 4 Transient expression of Arabidopsis mesophyll protoplast transformation using GSTU19P promoter
构建启动子载体:设计3个片段大小不同的片段分别是1856bp的(编号为Full-length)、702bp(编号为Del 2)、329bp(编号为Del 1),将上述片段分别装载到载体pCAMBIA1301和pCAMBIA1302(购自澳大利亚的CAMBIA实验室)上;将其命名为pCAMBIA1301-Full-length,pCAMBIA1301-Del1,pCAMBIA1301-Del2,pCAMBIA1302-Full-length,pCAMBIA1302-Del1,pCAMBIA1302-Del2(见图6和图7),本实施例中的pCAMBIA1301系列载体(Full-length,Del1和Del2)和pCAMBIA1302系列载体(Full-length,Del1和Del2)所用的引物、扩增条件、载体构建的技术程序和农杆菌的转化方法同实施例3所述。采用PEG-钙介导法(Yoo,et al.2007)转化拟南芥叶肉原生质体(图8)。具体方法是:选取生长至3-4周大生长健壮的拟南芥植株,取其第5至第7片真叶,用刀片在叶片中部切下0.5~1mm宽的组织,快速将切下的组织放入酶解液中,完全浸没。用真空干燥器(上海精宏实验设备有限公司DZF-6050,按说明书操作)真空渗透30min。室温下酶解反应3h以上。在显微镜下检测提取的原生质体的质量。然后用等体积的W5 Solution稀释酶解液,用75μm的血液尼龙膜过滤网过滤未酶解的叶片组织。100g室温下离心2min,去上清。用血球计数板计数原生质体数。用W5 Solution重悬浮,使得细胞浓度为2×105个/ml,在冰上放置30min。去上清,再用MMG Solution重悬浮,使得细胞浓度为2×105个/ml,得到拟南芥的叶肉原生质体,于室温下放置。将10μL质粒DNA(10-20ug)加入到2ml离心管,再加入100μL拟南芥叶肉原生质体(约2×104个),轻轻混匀。再加入110μl 30%聚乙烯醇(PEG)溶液,轻轻混匀。室温放置5~15min。用440μl W5 Solution稀释,颠倒混匀终止反应。室温下100g离心2min。去上清,将拟南芥叶肉原生质体加入含有1mL WI Solution的6孔培养板中,室温培养3-8h,转化后加入0.1mmol/L水杨酸,培养16h,于100g下离心2min收集转化后的原生质体。本实施例所有的药品配置和操作方法按照上述Yoo等报道的方法(Yoo,et al.2007)。Construction of the promoter vector: Design 3 fragments with different sizes, respectively 1856bp (numbered as Full-length), 702bp (numbered as Del 2), 329bp (numbered as Del 1), and load the above fragments into the vectors pCAMBIA1301 and On pCAMBIA1302 (purchased from the CAMBIA laboratory of Australia); it is named pCAMBIA1301-Full-length, pCAMBIA1301-Del1, pCAMBIA1301-Del2, pCAMBIA1302-Full-length, pCAMBIA1302-Del1, pCAMBIA1302-Del2 (see Fig. 6 and Fig. 7 ), the used primers of the pCAMBIA1301 series vectors (Full-length, Del1 and Del2) and pCAMBIA1302 series vectors (Full-length, Del1 and Del2) in the present embodiment, the technical procedures for amplification conditions, vector construction and the transformation of Agrobacterium Method is described with embodiment 3. Arabidopsis mesophyll protoplasts were transformed using the PEG-calcium-mediated method (Yoo, et al. 2007) (Fig. 8). The specific method is: select a robust Arabidopsis plant that has grown to 3-4 weeks old, take the 5th to 7th true leaves, cut off a 0.5-1mm wide tissue in the middle of the blade with a blade, and quickly remove the cut tissue. Put it into the enzymatic hydrolysis solution and submerge completely. Use a vacuum desiccator (Shanghai Jinghong Experimental Equipment Co., Ltd. DZF-6050, operate according to the instructions) to vacuum infiltrate for 30 minutes. Enzymolysis reaction at room temperature for more than 3 hours. The quality of the extracted protoplasts was examined under a microscope. Then dilute the enzymatic solution with an equal volume of W5 Solution, and filter the non-enzymolyzed leaf tissue with a 75 μm blood nylon membrane filter. Centrifuge at 100 g for 2 min at room temperature, and remove the supernatant. Count the number of protoplasts with a hemocytometer. Resuspend with W5 Solution to make the
将pCAMBIA1302系列转化的拟南芥叶肉原生质体用于GFP荧光观察,其结果如图8所示。由图8可知,利用pCAMBIA1302空载体转化的原生质体,荧光强度最强,说明GSTU19启动子虽然已经能够启动GFP基因的表达,但强度没有CaMV35S启动子的活性强。对比水杨酸处理和未处理的两组图片可以发现Del 1中对照的荧光强度要大于处理组的;而Del 2组中水杨酸处理后GFP则表达更强,说明-300bp的启动子片段已经具备了启动转录的功能;而在-700~-300bp之间可能存在着水杨酸诱导元件(图8)。The Arabidopsis thaliana mesophyll protoplasts transformed with pCAMBIA1302 series were used for GFP fluorescence observation, and the results are shown in FIG. 8 . It can be seen from Figure 8 that the protoplasts transformed with pCAMBIA1302 empty vector had the strongest fluorescence intensity, indicating that although the GSTU19 promoter has been able to activate the expression of the GFP gene, the intensity is not as strong as that of the CaMV35S promoter. Comparing the two groups of pictures treated with salicylic acid and untreated, it can be found that the fluorescence intensity of the control in
与此同时,本实施例还将pCAMBIA1301系列转化的拟南芥叶肉原生质体做平行的GUS活性定量分析,其转化的方法同pCAMBIA1302的转化方法。GUS活性的荧光定量测定参考Jefferson的方法(Jefferson,et al.1987),其结果如图9所示,由图9可知,在没有水杨酸处理的对照组,pCAMBIA1301空载体的GUS表达强度要强于其他三个重组载体,说明没有任何处理的情况下,GSTU19P启动子虽然已经能够启动基因表达,但强度没有CaMV35S启动子的活性强(pCAMBIA1301空载体由CaMV35S启动子启动GUS表达)。At the same time, in this example, the Arabidopsis thaliana mesophyll protoplasts transformed with pCAMBIA1301 series were used for quantitative analysis of GUS activity in parallel, and the transformation method was the same as that of pCAMBIA1302. The fluorescent quantitative determination of GUS activity refers to Jefferson's method (Jefferson, et al.1987), and its result is as shown in Figure 9, as can be seen from Figure 9, in the control group that does not have salicylic acid treatment, the GUS expression intensity of pCAMBIA1301 empty vector is stronger Compared with the other three recombinant vectors, it shows that the GSTU19P promoter can promote gene expression without any treatment, but the activity is not as strong as that of the CaMV35S promoter (pCAMBIA1301 empty vector is used to promote GUS expression by the CaMV35S promoter).
表2本发明设计的相关引物的核苷酸序列The nucleotide sequences of the related primers designed by the present invention in table 2
再比较对照组和处理组,在加有CaMV35S启动子为组成型表达的启动子的前提下,不论是否施用水杨酸,都不影响启动子活性(见图9中1301组)。在Del1的缺失组中,水杨酸处理后GUS表达略有升高;在Del 2缺失组中水杨酸处理后GUS表达变强,是未加水杨酸处理组的5倍;而在Full-length组中,其处理前后的GUS表达量都是一样的,表明本发明的GSTU19P启动子-300bp的启动子片段已经具备了启动转录的功能;而在-700~-300bp之间可能存在水杨酸诱导元件(图9)。Comparing the control group and the treatment group, under the premise that the CaMV35S promoter is a constitutively expressed promoter, no matter whether salicylic acid is administered or not, the promoter activity will not be affected (see
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