R package for comparison of synteny conservation at the genome-wide scale.

oxford dot plots

A genome visualization python package for comparative genomics

Gmove is a gene prediction tool

ancestry

Graphical user interface for exploring space, time, and taxa in the PBDB

Shiny app that plots NCBI genomes size versus protein count

Python library for the symbolic manipulation of phoneme representations

Data and scripts for producing a Baysian phylogenetic tree sample of for the Indo-European family which is "good enough", using data from IELex (Dunn et al. 2011).

A complete pipeline for metagenomic analysis

A parser for Google Scholar, written in Python

Transcript assembly and quantification for RNA-Seq

GenomeTools genome analysis system.

An analysis and visualization platform for 'omics data

COPSE reloaded public release

Extensive de-novo TE Annotator

Get, parse, and extract information from the SRA metadata files

Make Interactive Complex Heatmaps

Check and score C/C++ software quality

A simple code complexity analyser without caring about the C/C++ header files or Java imports, supports most of the popular languages.

An accurate GFF3/GTF lift over pipeline

A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.

Python programs for processing GFF3 files

"Unravelling the Evolution of Animals" following a Bioinformatics pipeline

Bring data to life with SVG, Canvas and HTML. 📊📈🎉

orthology assignment using phylogenetic and network analyses

A JBrowse plugin for plotting multiple bigwig subtracks

Bioinformatics code libraries and scripts

Tutorials on phylogenetic and phylogenomic inference