PromKappa V2.0 generates Objective Digital Stains (also called DNA patterns in the past). This is the second version of the application and it is made in Visual Basic 6.0 (VB6).
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Updated
Nov 20, 2022 - HTML
PromKappa V2.0 generates Objective Digital Stains (also called DNA patterns in the past). This is the second version of the application and it is made in Visual Basic 6.0 (VB6).
PromKappa 3.0 is a complete application made in Visual Basic 6.0 (VB6) that generates Objective Digital Stains (aka DNA patterns). The main output of the application consists of a series of images that are saved in the 'chart' (or 'chart_comp') folder and which can be later analyzed using different methods.
This is an application that shows the informational structure of DNA sequences. The objective digital stain (ODS) is represented by a distribution of points on a two-dimensional image, which reflects the information structure inside a DNA/RNA sequence.
A 3D Objective Digital Stain is able to show the information structure of a DNA or RNA sequence in a graphical manner. In this case, the ODS is computed using the local frequency of the symbols from a sliding window. In the 3D version, the overlapping values (similar sliding windows) are represented by a gradient from black to red.
Simple JS implementation of Objective Digital Stain (ODS) produces ODS images from DNA sequences. On ODSs, the information content (IC) is represented vertically on the y-axis and the frequency of different letters is represented horizontally on the x-axis.
A 3D Objective Digital Stain is able to show the information structure of a DNA or RNA sequence in a graphical manner. In this case, the ODS uses the global frequency of symbols (A, T/U, C, G) from the input sequence to calculate the local frequency of these symbols from a sliding window.
A 2D Objective Digital Stain is able to show the information structure of a DNA or RNA sequence in a graphical manner. In this case, the ODS is computed using the local frequency of the symbols from a sliding window.
O projeto inclui uma apresentação que explora os ODS e demonstra habilidades como comunicação eficaz e a capacidade de engajar o público com temas de impacto global.
ODS to HTML is an online tool that converts ODS (Operational Data Store) files into HTML (HyperText Markup Language) files.
ODS to XLSX is an online tool that converts ODS (Operational Data Store) files into XLSX (Microsoft Excel Spreadsheet XML) files.
O projeto inclui uma apresentação que explora os ODS e demonstra habilidades como comunicação eficaz e a capacidade de engajar o público com temas de impacto global.
CSV to ODS is an online tool that converts CSV files (data in a tabular format) into ODS (Operational Data Store) files.
ODS to XLS is an online tool that converts ODS (Operational Data Store) files into XLS (Microsoft Excel Spreadsheet) files.
ODS to PDF is an online tool that converts ODS (Operational Data Store) files into PDF (Portable Document Format) files.
ODS to CSV is an online tool that converts ODS (Operational Data Store) files into CSV (Comma-Separated Values) files.
XLSX to ODS is an online tool that converts documents created in Microsoft Excel(XLS/XLSX) or other spreadsheet processing formats into ODS (Operational Data Store) files.
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