Siegert Lab
- 4 followers
- Am Campus 1, Klosterneuburg, Austria
- https://ist.ac.at/en/research/siegert-group/
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morphOMICs
morphOMICs PublicmorphOMICs is a topological data analysis approach which combines the Topological Morphology Descriptor (TMD) with bootstrapping approach, dimensionality reduction strategies to visualize microglia…
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MorphOMICs_legacy
MorphOMICs_legacy Public archiveTopological data analysis tool to map microglia morphology along sex- and brain-region-specific spectra
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Kilosort3
Kilosort3 PublicForked from MouseLand/Kilosort
Fast spike sorting with drift correction for up to a thousand channels
MATLAB
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ripser
ripser PublicForked from Ripser/ripser
Ripser: efficient computation of Vietoris–Rips persistence barcodes
C++
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TMD
TMD PublicForked from BlueBrain/TMD
A python package for the topological analysis of neurons.
Python
Repositories
- morphOMICs Public
morphOMICs is a topological data analysis approach which combines the Topological Morphology Descriptor (TMD) with bootstrapping approach, dimensionality reduction strategies to visualize microglial morphological signatures and their relationships across different biological conditions.
siegert-lab/morphOMICs’s past year of commit activity - RGC-Quant Public Forked from AminAlam/RGC-Quant
Retinal Ganglion Cell (RGC) automatic counting in 3D confocal images using Deep Learning
siegert-lab/RGC-Quant’s past year of commit activity - MorphOMICs_legacy Public archive
Topological data analysis tool to map microglia morphology along sex- and brain-region-specific spectra
siegert-lab/MorphOMICs_legacy’s past year of commit activity - Data-Manager Public
A web application which could efficiently store and search data, whilst also incorporating annotation features
siegert-lab/Data-Manager’s past year of commit activity - RHD_Electrophysiology Public Forked from AminAlam/ElecPhys
Scripts and codes for conversion, preprocessing, and postprocessing of electrophysiology data recorded using RHD devices
siegert-lab/RHD_Electrophysiology’s past year of commit activity - Electrophysiology Public
siegert-lab/Electrophysiology’s past year of commit activity - Kilosort3 Public Forked from MouseLand/Kilosort
Fast spike sorting with drift correction for up to a thousand channels
siegert-lab/Kilosort3’s past year of commit activity - scvi-tools Public Forked from scverse/scvi-tools
Deep probabilistic analysis of single-cell omics data
siegert-lab/scvi-tools’s past year of commit activity
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