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@daisybio

Data Science in Systems Biology

The research group Data Science in Systems Biology at the School of Life Sciences, Technical University of Munich

Popular repositories Loading

  1. OpenLabFramework OpenLabFramework Public archive

    A open source framework for research data management. DEMO at https://dockerhts.compbio.sdu.dk/OpenLabFramework/login/auth

    JavaScript 21 6

  2. data-leakage-ppi-prediction data-leakage-ppi-prediction Public

    Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'

    C++ 19 1

  3. TF-Prioritizer TF-Prioritizer Public

    Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data

    Java 13

  4. SPONGE SPONGE Public

    Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference

    R 11 9

  5. BiCoN BiCoN Public

    Network Constrained Biclustering PyPI package

    Python 10 2

  6. namco namco Public

    R 9 2

Repositories

Showing 10 of 84 repositories
  • daisybio/SPONGE-web-backend’s past year of commit activity
    Python 0 GPL-3.0 0 0 5 Updated Nov 24, 2024
  • daisybio/SPONGE-web-frontend’s past year of commit activity
    TypeScript 0 GPL-3.0 0 1 2 Updated Nov 23, 2024
  • DIGGER Public Forked from louadi/DIGGER

    Fork for developing Digger 2.0

    daisybio/DIGGER’s past year of commit activity
    Python 0 GPL-3.0 3 8 (1 issue needs help) 0 Updated Nov 23, 2024
  • easyLiftover Public

    This repository wraps the pyliftover package to provide an option for lifting over common bioinformatics file types.

    daisybio/easyLiftover’s past year of commit activity
    Python 0 GPL-3.0 0 2 2 Updated Nov 22, 2024
  • drevalpy Public

    DrEval is a toolkit that ensures drug response prediction evaluations are statistically sound, biologically meaningful, and reproducible.

    daisybio/drevalpy’s past year of commit activity
    Python 4 GPL-3.0 1 20 (1 issue needs help) 0 Updated Nov 21, 2024
  • namco Public
    daisybio/namco’s past year of commit activity
    R 9 GPL-3.0 2 21 0 Updated Nov 21, 2024
  • daisybio/teff-treg-satb1-analysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 13, 2024
  • IHEC-AS Public
    daisybio/IHEC-AS’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Nov 8, 2024
  • NeEDL Public
    daisybio/NeEDL’s past year of commit activity
    C++ 4 GPL-3.0 1 5 3 Updated Nov 7, 2024
  • cyanus Public

    A Systematic Comparison of Differential Analysis Methods for CyTOF Data & CYANUS App

    daisybio/cyanus’s past year of commit activity
    R 4 GPL-3.0 2 8 (1 issue needs help) 0 Updated Oct 23, 2024