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Center for Computational Structural Biology

Docking and Mesoscale Modeling

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  1. Illustrate Illustrate Public

    Biomolecular Illustration Tool

    Fortran 119 23

  2. AutoDock-GPU AutoDock-GPU Public

    AutoDock for GPUs and other accelerators

    C++ 523 136

  3. ADCP ADCP Public

    AutoDock CrankPep for peptide and disordered protein docking

    C 51 10

  4. AutoDock-Vina AutoDock-Vina Public

    AutoDock Vina

    C++ 826 262

Repositories

Showing 10 of 11 repositories
  • AutoDock-Vina Public

    AutoDock Vina

    ccsb-scripps/AutoDock-Vina’s past year of commit activity
    C++ 826 Apache-2.0 262 64 9 Updated Oct 7, 2025
  • AutoDock-GPU Public

    AutoDock for GPUs and other accelerators

    ccsb-scripps/AutoDock-GPU’s past year of commit activity
    C++ 523 GPL-2.0 136 74 (2 issues need help) 7 Updated Sep 24, 2025
  • AutoGrid Public
    ccsb-scripps/AutoGrid’s past year of commit activity
    C++ 10 GPL-2.0 4 3 1 Updated Dec 8, 2024
  • Illustrate Public

    Biomolecular Illustration Tool

    ccsb-scripps/Illustrate’s past year of commit activity
    Fortran 119 Apache-2.0 23 1 0 Updated Aug 17, 2024
  • AutoDock4 Public
    ccsb-scripps/AutoDock4’s past year of commit activity
    C++ 4 GPL-2.0 5 0 0 Updated Feb 1, 2024
  • ModularNucleoid Public

    ModularNucleoid is used to generate models of the minimal genome bacterium JCVI-Syn3A, producing a series of models that test hypotheses about transcription, condensation, and overall distribution of the genome.

    ccsb-scripps/ModularNucleoid’s past year of commit activity
    Fortran 0 GPL-3.0 1 0 0 Updated Nov 3, 2023
  • virus_lesson Public

    A lesson about virus in Virtual reality

    ccsb-scripps/virus_lesson’s past year of commit activity
    1 GPL-3.0 0 0 0 Updated Jun 12, 2023
  • MycoplasmaGenitalium Public

    Modelling of Mycoplasma genitalium

    ccsb-scripps/MycoplasmaGenitalium’s past year of commit activity
    Fortran 61 MIT 10 0 0 Updated Jun 3, 2022
  • ISG Public

    Insulin Secretory Granule Model

    ccsb-scripps/ISG’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated May 25, 2022
  • ADCP Public

    AutoDock CrankPep for peptide and disordered protein docking

    ccsb-scripps/ADCP’s past year of commit activity
    C 51 10 9 0 Updated May 4, 2021

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C++ Fortran C

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