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1. KoslickiLab/fmh-funprofiler KoslickiLab/fmh-funprofiler Public

   A functional profiler for metagenomes using FracMinHash

   Python 18 2

2. KoslickiLab/frac-kmc KoslickiLab/frac-kmc Public

   Fast FracMinHash sketch generator

   C++ 3 1

3. KoslickiLab/YACHT KoslickiLab/YACHT Public

   A mathematically characterized hypothesis test for organism presence/absence in a metagenome

   C++ 33 9

4. KoslickiLab/sourmash_alternate_implementations KoslickiLab/sourmash_alternate_implementations Public

   Implement prefetch in cpp to investigate potential speedups

   Standard ML 3

5. KoslickiLab/mutation-rate-ci-calculator KoslickiLab/mutation-rate-ci-calculator Public

   This software calculates a confidence interval for the mutation rate from a set of observed containment indices under a simple nucleotide mutation process.

   Python 7 1

6. KoslickiLab/estimate_rates_using_mutation_model KoslickiLab/estimate_rates_using_mutation_model Public

   This repository computes insertion, deletion, and substitution rates simultaneously under a non-simple mutation model using k-mers

   Python 2 1