Stars
Accessible Metagenomics/viromics for public health and clinical domains. Focuses on automation, accessibility and a clear audit trail.
A minimalist tree plotting library using toyplot graphs
Cross-platform software to draw phylogenetic trees
baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
A Snakemake executor plugin for submitting jobs to a LSF cluster
Turn (almost) any Python command line program into a full GUI application with one line
Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionformatics tools to a user interface. It is usable on all major …
DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm
Iconic font aggregator, collection, & patcher. 3,600+ icons, 50+ patched fonts: Hack, Source Code Pro, more. Glyph collections: Font Awesome, Material Design Icons, Octicons, & more
All Algorithms implemented in Python
Slim(toolkit): Don't change anything in your container image and minify it by up to 30x (and for compiled languages even more) making it secure too! (free and open source)
MMseqs2: ultra fast and sensitive search and clustering suite
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
Streamlit — A faster way to build and share data apps.
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and …