Europe PMC requires Javascript to function effectively.
Either your web browser doesn't support Javascript or it is currently turned off. In the latter case, please
turn on Javascript support in your web browser and reload this page.
PMC full text: | - Copyright/LicenseRequest permission to reuse
Copyright © This is a U.S. government work and not under copyright protection in the U.S; foreign copyright protection may apply 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
| |
Fig. 4
Variants reported in assembly of SRR10541157 by SAUTE low for thoc5 protein. SAUTE produces correct variants using pairing information in reads for region A while the variant produced by both rnaSPAdes and Trinity is not supported by any paired read. Region B shows haplotyping achieved using reads alone as highlighted in yellow and additional haplotyping achieved using pairing information
Images in this article
Click on the image to see a larger version.