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Volume 43, Issue 5June, 2013
Reflects downloads up to 30 Sep 2024Bibliometrics
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article
Accurate computation of traveling wavefronts in a biological hydrodynamic model

This paper concerns a hyperbolic-elliptic system of partial differential equations for the biological cell density and cell velocity. This system appears as a mathematical model for describing the dynamics of cell motion. Traveling wavefront solutions ...

article
Prediction of pre-miRNA with multiple stem-loops using pruning algorithm

In addition to experimental identification of pre-miRNAs, the computational prediction method is also becoming a hot research spot. Most existing prediction methods are usually excluding those pre-miRNAs with multiple loops. But as more and more miRNA ...

article
Computational study of particle size effects on selective binding of nanoparticles in arterial stenosis

In order to elucidate particle size and wall shear effects on the selective binding of nanoparticles to vessel wall, particle binding to the wall of arterial stenosis was computationally analyzed using a transport and reaction model. The attachment rate ...

article
Improved wavelet entropy calculation with window functions and its preliminary application to study intracranial pressure

The wavelet entropy is a novel way to measure the signal regularity, and its calculation is based on the energy distribution in wavelet sub-bands. However, wavelet entropy will be largely influenced by the noise usually existed in signals, especially in ...

article
Integration testing through reusing representative unit test cases for high-confidence medical software

As medical software is getting larger-sized, complex, and connected with other devices, finding faults in integrated software modules gets more difficult and time consuming. Existing integration testing typically takes a black-box approach, which treats ...

article
Formal specification and analysis of intelligent agents for model-based medicine usage management

A model-based agent system model for medicine usage management is presented and formally analysed. The model incorporates an intelligent ambient agent model that has an explicit representation of a dynamical system model to estimate the medicine level ...

article
A robust medical image segmentation method using KL distance and local neighborhood information

In this paper, we propose an improved Chan-Vese (CV) model that uses Kullback-Leibler (KL) distances and local neighborhood information (LNI). Due to the effects of heterogeneity and complex constructions, the performance of level set segmentation is ...

article
An algorithm for rapid computational construction of metabolic networks: A cholesterol biosynthesis example

Alternative pathways of metabolic networks represent the escape routes that can reduce drug efficacy and can cause severe adverse effects. In this paper we introduce a mathematical algorithm and a coding system for rapid computational construction of ...

article
PMBC: Pattern mining from biological sequences with wildcard constraints

Patterns/subsequences frequently appearing in sequences provide essential knowledge for domain experts, such as molecular biologists, to discover rules or patterns hidden behind the data. Due to the inherent complex nature of the biological data, ...

article
Results on mining NHANES data: A case study in evidence-based medicine

The National Health and Nutrition Examination Survey (NHANES), administered annually by the National Center for Health Statistics, is designed to assess the general health and nutritional status of adults and children in the United States. Given to ...

article
Estimation of saline-mixed tissue conductivity and ablation lesion size

In radiofrequency ablation (RFA), saline infusion is beneficial for enhancing electrical conductivity, which allows more energy dissipation into target tissue, resulting in increased lesion size. Computational simulation has been a popular method to ...

article
A semi-automated computer tool for the analysis of retinal vessel diameter dynamics

Retinal vessels are directly accessible to clinical observation. This has numerous potential interests for medical investigations. Using the Retinal Vessel Analyzer, a dedicated eye fundus camera enabling dynamic, video-rate recording of micrometric ...

article
Automatic removal of sonomotor waves from auditory brainstem responses

We have developed a computerized technique for automatic detection and removal of sonomotor waves (SMWs) from auditory brainstem responses (ABRs). Our approach is based on adaptive decomposition using a redundant set of Gaussian and 1-cycle-limited ...

article
SVM-based feature selection to optimize sensitivity-specificity balance applied to weaning

Classification algorithms with unbalanced datasets tend to produce high predictive accuracy over the majority class, but poor predictive accuracy over the minority class. This problem is very common in biomedical data mining. This paper introduces a ...

article
A novel method for retinal vessel tracking using particle filters

Extraction of a proper map from the vessel paths in the retinal images is a prerequisite for many applications such as identification. In this paper, we present a new approach based on particle filtering to determine and locally track the vessel paths ...

article
Modelling medical care usage under medical insurance scheme for urban non-working residents

This research investigates and evaluates China's urban medical care usage for non-working residents using microsimulation techniques. It focuses on modelling medical services usage and simulating medical expenses on hospitalization treatments as well as ...

article
Parameterization of the distribution of white and grey matter in MRI using the α-stable distribution

This work presents a study of the distribution of the grey matter (GM) and white matter (WM) in brain magnetic resonance imaging (MRI). The distribution of GM and WM is characterized using a mixture of @a-stable distributions. A Bayesian @a-stable ...

article
A supervised orthogonal discriminant projection for tumor classification using gene expression data

An important application of gene expression data is tumor classification. Dimensionality reduction is a key step of tumor classification, as gene expression data is of high dimensionality and small sample size (SSS) and it contains a large number of ...

article
Classification of EMG signals using PSO optimized SVM for diagnosis of neuromuscular disorders

Support vector machine (SVM) is an extensively used machine learning method with many biomedical signal classification applications. In this study, a novel PSO-SVM model has been proposed that hybridized the particle swarm optimization (PSO) and SVM to ...

article
Automatic vessel network features quantification using local vessel pattern operator

Automatic measurement and quantification of blood vessels' features and detection of vessel landmarks are key steps in the computer-aided diagnosis and diseases monitoring. This work proposes a novel and robust method for detecting vessel landmarks, ...

article
Effect of genetic regions on the correlation between single point mutation variability and morbidity

Cross-species sequence comparisons have suggested that cross-species sequence variability is correlated with functionality. The goal of this study was to extend this observation at different genetic regions, focusing on the morbidity of Single ...

article
Approach for streamlining measurement of complex physiological phenotypes of upper airway collapsibility

The critical closing pressure (P"C"R"I"T), a quantitative assessment of upper airway collapsibility", is derived from pressure flow relationship during sleep. The analytic generation of the pressure flow relationships are non-standardized due to various ...

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