Export Citations
Save this search
Please login to be able to save your searches and receive alerts for new content matching your search criteria.
- research-articleJanuary 2020
Convergence Rates of the Allen--Cahn Equation to Mean Curvature Flow: A Short Proof Based on Relative Entropies
SIAM Journal on Mathematical Analysis (SIMA), Volume 52, Issue 6Pages 6222–6233https://doi.org/10.1137/20M1322182We give a short and self-contained proof for rates of convergence of the Allen--Cahn equation towards mean curvature flow, assuming that a classical (smooth) solution to the latter exists and starting from well-prepared initial data. Our approach is based ...
- research-articleJanuary 2020
Dynamics of Time-Periodic Reaction-Diffusion Equations with Front-Like Initial Data on $\mathbb{R}$
SIAM Journal on Mathematical Analysis (SIMA), Volume 52, Issue 3Pages 2411–2462https://doi.org/10.1137/19M1268987This paper is concerned with the Cauchy problem $u_{t}=u_{xx}+f(t,u),x\in \mathbb{R} ,t>0$ with initial function $u(0,\cdot)=u_0 (\cdot)\in L^{\infty} (\mathbb{R})$, where $f$ is a rather general nonlinearity that is periodic in $t$, and satisfies $f(\...
- research-articleJanuary 2018
Reaction-Diffusion Problems on Time-Dependent Riemannian Manifolds: Stability of Periodic Solutions
SIAM Journal on Mathematical Analysis (SIMA), Volume 50, Issue 6Pages 6082–6099https://doi.org/10.1137/17M1161865We investigate the stability of time-periodic solutions of semilinear parabolic problems with Neumann boundary conditions, posed on a domain of a Riemannian manifold. On the domain we consider metrics that vary periodically in time. The discussion is based ...
- research-articleJanuary 2018
Multiscale Modeling and Numerical Simulation of Calcium Cycling in Cardiac Myocytes
Multiscale Modeling and Simulation (MMS), Volume 16, Issue 3Pages 1115–1145https://doi.org/10.1137/17M1121639Simulation of electrophysiology and intracellular ${Ca}^{2+}$ dynamics in cardiomyocytes comprises fast stochastic dynamics in tiny subcompartments, partial differential equations (PDEs) with stochastic source terms for concentration fields, and the ...
- research-articleJanuary 2017
Rattling in Spatially Discrete Diffusion Equations with Hysteresis
Multiscale Modeling and Simulation (MMS), Volume 15, Issue 3Pages 1176–1197https://doi.org/10.1137/16M106039XThe paper treats a reaction-diffusion equation with hysteretic nonlinearity on a one-dimensional lattice. It arises as a result of the spatial discretization of the corresponding continuous model with so-called nontransverse initial data and exhibits a ...
-
- research-articleJanuary 2016
Optimal Transport in Competition with Reaction: The Hellinger--Kantorovich Distance and Geodesic Curves
SIAM Journal on Mathematical Analysis (SIMA), Volume 48, Issue 4Pages 2869–2911https://doi.org/10.1137/15M1041420We discuss a new notion of distance on the space of finite and nonnegative measures on $\Omega \subset {\mathbb R}^d$, which we call the Hellinger--Kantorovich distance. It can be seen as an inf-convolution of the well-known Kantorovich--Wasserstein ...
- research-articleJanuary 2016
Global Existence of Solutions to Reaction-Diffusion Systems with Mass Transport Type Boundary Conditions
SIAM Journal on Mathematical Analysis (SIMA), Volume 48, Issue 6Pages 4202–4240https://doi.org/10.1137/15M1015145We consider a reaction-diffusion system where some components react and diffuse on the boundary of a region, while other components diffuse in the interior and react with those on the boundary through mass transport. We establish local well-posedness and ...
- research-articleJanuary 2015
Admissible speeds of transition fronts for nonautonomous monostable equations
SIAM Journal on Mathematical Analysis (SIMA), Volume 47, Issue 5Pages 3342–3392https://doi.org/10.1137/140995519We consider a reaction-diffusion equation with a nonlinear term of the Fisher-KPP-type, depending on time $t$ and admitting two limits as $t\to\pm\infty$. We derive the set of admissible asymptotic past and future speeds of transition fronts for such an ...
- research-articleJanuary 2014
Identification of Space-Time Distributed Parameters in the Gierer--Meinhardt Reaction-Diffusion System
SIAM Journal on Applied Mathematics (SJAM), Volume 74, Issue 1Pages 147–166https://doi.org/10.1137/120885784We consider parameter identification for the classic Gierer--Meinhardt reaction-diffusion system. The original Gierer--Meinhardt model [A. Gierer and H. Meinhardt, Kybernetik, 12 (1972), pp. 30--39] was formulated with constant parameters and has been used ...
- articleNovember 2013
Singularly perturbed reaction–diffusion equations in a circle with numerical applications
International Journal of Computer Mathematics (IJOCM), Volume 90, Issue 11Pages 2308–2325https://doi.org/10.1080/00207160.2013.772987The goal of this article is to study the boundary layers of reaction–diffusion equations in a circle and provide some numerical applications which utilize the so-called boundary layer elements. Via the boundary layer analysis, we obtain the valid ...
- articleMarch 2013
Contrast structures in the reaction-diffusion-advection equations in the case of balanced advection
Computational Mathematics and Mathematical Physics (CMMP), Volume 53, Issue 3Pages 273–283https://doi.org/10.1134/S096554251303007XFor a singularly perturbed parabolic equation termed in applications as the reaction-diffusion-advection equation, stationary solutions with internal transition layers (contrast structures) are studied. An arbitrary-order asymptotic approximation of ...
- research-articleJanuary 2012
A Singular Hamilton--Jacobi Equation Modeling the Tail Problem
SIAM Journal on Mathematical Analysis (SIMA), Volume 44, Issue 6Pages 4297–4319https://doi.org/10.1137/100819527We study the asymptotic (long-time/long-range) exponential behavior of the solutions to reaction-diffusion equations with negative square root--type reaction terms. In contrast to the classical cases, for example, KPP-type nonlinearities, the behavior is not ...
- articleJanuary 2012
New Resolution Strategy for Multiscale Reaction Waves using Time Operator Splitting, Space Adaptive Multiresolution, and Dedicated High Order Implicit/Explicit Time Integrators
- Max Duarte,
- Marc Massot,
- Stéphane Descombes,
- Christian Tenaud,
- Thierry Dumont,
- Violaine Louvet,
- Frédérique Laurent
SIAM Journal on Scientific Computing (SISC), Volume 34, Issue 1Pages 76–104https://doi.org/10.1137/100816869We tackle the numerical simulation of reaction-diffusion equations modeling multi-scale reaction waves. This type of problem induces peculiar difficulties and potentially large stiffness which stem from the broad spectrum of temporal scales in the ...
- articleDecember 2010
Relating PDEs in Cylindrical Coordinates and CTMCs with Levels of Concentration
Electronic Notes in Theoretical Computer Science (ENTCS) (ENTCS), Volume 268Pages 49–59https://doi.org/10.1016/j.entcs.2010.12.005We present the derivation of a CTMC with levels model of diffusion in cylindrical coordinates from the partial differential equation for Fick's law. The resulting model abstracts both molar concentration, by discrete levels, and spatial location, by ...
- ArticleApril 2010
A reaction-diffusion model of the human brain development
The anatomical variability of the human brain folds remains an unclear and challenging issue. Several hypotheses coexist for explaining the rapid development of cortical sulci and it is clear that understanding their variability would improve the ...
- articleOctober 2008
Multilevel Additive Schwarz Preconditioners for the Bidomain Reaction-Diffusion System
SIAM Journal on Scientific Computing (SISC), Volume 31, Issue 1Pages 420–443https://doi.org/10.1137/070706148Multilevel additive Schwarz methods are analyzed and studied numerically for the anisotropic cardiac Bidomain model in three dimensions. This is the most complete model to date of the bioelectrical activity of the heart tissue, consisting of a ...
- articleOctober 2008
Multigrid Algorithms for Inverse Problems with Linear Parabolic PDE Constraints
SIAM Journal on Scientific Computing (SISC), Volume 31, Issue 1Pages 369–397https://doi.org/10.1137/070687426We present a multigrid algorithm for the solution of source identification inverse problems constrained by variable-coefficient linear parabolic partial differential equations. We consider problems in which the inversion variable is a function of space ...
- articleMarch 2008
An A Posteriori-A Priori Analysis of Multiscale Operator Splitting
SIAM Journal on Numerical Analysis (SINUM), Volume 46, Issue 3Pages 1116–1146https://doi.org/10.1137/07068237XIn this paper, we analyze a multiscale operator splitting method for solving systems of ordinary differential equations such as those that result upon space discretization of a reaction-diffusion equation. Our goal is to analyze and accurately estimate ...
- research-articleJanuary 2006
Adaptivity in Space and Time for Reaction-Diffusion Systems in Electrocardiology
SIAM Journal on Scientific Computing (SISC), Volume 28, Issue 3Pages 942–962https://doi.org/10.1137/050634785The paper introduces and studies numerical methods that are fully adaptive in both three-dimensional (3D) space and time to challenging multiscale cardiac reaction-diffusion models. In these methods, temporal adaptivity comes via stepsize control in ...
- research-articleJanuary 2006
Spectral Methods for Partial Differential Equations in Irregular Domains: The Spectral Smoothed Boundary Method
SIAM Journal on Scientific Computing (SISC), Volume 28, Issue 3Pages 886–900https://doi.org/10.1137/040607575In this paper, we propose a numerical method to approximate the solution of partial differential equations in irregular domains with no-flux boundary conditions. The idea is to embed the domain into a box and use a smoothing term to encode the boundary ...