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An interactive medical image segmentation framework using iterative refinement

Published: 01 April 2017 Publication History

Abstract

Segmentation is often performed on medical images for identifying diseases in clinical evaluation. Hence it has become one of the major research areas. Conventional image segmentation techniques are unable to provide satisfactory segmentation results for medical images as they contain irregularities. They need to be pre-processed before segmentation. In order to obtain the most suitable method for medical image segmentation, we propose MIST (Medical Image Segmentation Tool), a two stage algorithm. The first stage automatically generates a binary marker image of the region of interest using mathematical morphology. This marker serves as the mask image for the second stage which uses GrabCut to yield an efficient segmented result. The obtained result can be further refined by user interaction, which can be done using the proposed Graphical User Interface (GUI). Experimental results show that the proposed method is accurate and provides satisfactory segmentation results with minimum user interaction on medical as well as natural images. Graphical abstractDisplay Omitted

References

[1]
P. Karasev, I. Kolesov, K. Fritscher, P. Vela, P. Mitchell, A. Tannenbaum, Interactive medical image segmentation using pde control of active contours, IEEE Trans. Med. Imaging, 32 (2013) 2127-2139.
[2]
F. Zhao, X. Xie, An overview of interactive medical image segmentation, Ann. BMVA, 2013 (2013) 1-22.
[3]
S.P. Dakua, J. Abi-Nahed, Patient oriented graph-based image segmentation, Biomed. Signal Process. Control, 8 (2013) 325-332.
[4]
W. Khan, Image segmentation techniques: a survey, J. Image Graph., 1 (2013) 166-170.
[5]
D.D. Patil, S.G. Deore, Medical image segmentation: a review, Int. J. Comput. Sci. Mob. Comput., 2 (2013) 22-27.
[6]
E.-S.A. El-Dahshan, H.M. Mohsen, K. Revett, A.-B.M. Salem, Computer-aided diagnosis of human brain tumor through mri: A survey and a new algorithm, Expert Syst. Appl., 41 (2014) 5526-5545.
[7]
J. Stawiaski, E. Decenciere, F. Bidault, Interactive liver tumor segmentation using graph-cuts and watershed, in: Workshop on 3D Segmentation in the Clinic: A Grand Challenge II. Liver Tumor Segmentation Challenge. MICCAI, New York, USA, 2008.
[8]
B. Peng, L. Zhang, D. Zhang, A survey of graph theoretical approaches to image segmentation, Pattern Recognit., 46 (2013) 1020-1038.
[9]
Z. Yu, M. Xu, Z. Gao, Biomedical image segmentation via constrained graph cuts and pre-segmentation, in: Engineering in Medicine and Biology Society, EMBC, 2011 Annual International Conference of the IEEE, 2011, pp. 57145717.
[10]
Raw data. (n.d.) Medical Dictionary, http://medical-dictionary.thefreedictionary.com/raw+data (2009).
[11]
R.C. Gonzalez, R.E. Woods, Digital Image Processing, Prentice Hall, 2008.
[12]
L.M. Lifshitz, S.M. Pizer, A Multiresolution Hierarchical Approach to Image Segmentation Based on Intensity Extrema, in: Information Processing in Medical Imaging, Springer, 1988.
[13]
C. Rother, V. Kolmogorov, A. Blake, Grabcut: Interactive foreground extraction using iterated graph cuts, in: ACM transactions on graphics (TOG), vol. 23, ACM, 2004, pp. 309314.
[14]
P. Mildenberger, M. Eichelberg, E. Martin, Introduction to the DICOM standard, Eur. Radiol., 12 (2002) 920-927.
[15]
V. Gulshan, C. Rother, A. Criminisi, A. Blake, A. Zisserman, Geodesic star convexity for interactive image segmentation, in: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010.
[16]
D.L. Pham, C. Xu, J.L. Prince, Current methods in medical image segmentation 1, Annu. Rev. Biomed. Eng., 2 (2000) 315-337.
[17]
P.R. Bai, Q.Y. Liu, L. Li, S.H. Teng, J. Li, M.Y. Cao, A novel region-based level set method initialized with mean shift clustering for automated medical image segmentation, Comput. Biol. Med., 43 (2013) 1827-1832.
[18]
C. Li, C. Xu, C. Gui, M.D. Fox, Distance regularized level set evolution and its application to image segmentation, IEEE Trans. Image Process., 19 (2010) 3243-3254.
[19]
C. Li, C. Xu, C. Gui, M.D. Fox, Distance regularized level set evolution and its application to image segmentation, IEEE Trans. Image Process., 19 (2010) 3243-3254.
[20]
C. Li, C. Xu, C. Gui, M. D. Fox, Level set evolution without re-initialization: a new variational formulation, in: Computer Vision and Pattern Recognition, 2005. CVPR 2005. IEEE Computer Society Conference on, vol. 1, IEEE, 2005, pp. 430436.
[21]
Y. Y. Boykov, M.-P. Jolly, Interactive graph cuts for optimal boundary &region segmentation of objects in ND images, in: ICCV 2001. Proceedings. Eighth IEEE International Conference on Computer Vision, vol. 1, IEEE, 2001, pp. 105112.
[22]
Source Code, http://home.iitj.ac.in/chiranjoy/research/medimage.html (2016).

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  1. An interactive medical image segmentation framework using iterative refinement

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    Information & Contributors

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    Published In

    cover image Computers in Biology and Medicine
    Computers in Biology and Medicine  Volume 83, Issue C
    April 2017
    182 pages

    Publisher

    Pergamon Press, Inc.

    United States

    Publication History

    Published: 01 April 2017

    Author Tags

    1. Interactive
    2. MRI
    3. Medical image
    4. Morphology
    5. Segmentation
    6. X-ray

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    • (2021)-Score-Based Secure Biomedical Model for Effective Skin Lesion Segmentation Over eHealth CloudACM Transactions on Multimedia Computing, Communications, and Applications10.1145/343080617:2s(1-19)Online publication date: 14-Jun-2021
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