Quantitative Biology > Quantitative Methods
[Submitted on 13 Jul 2023]
Title:PatchSorter: A High Throughput Deep Learning Digital Pathology Tool for Object Labeling
View PDFAbstract:The discovery of patterns associated with diagnosis, prognosis, and therapy response in digital pathology images often requires intractable labeling of large quantities of histological objects. Here we release an open-source labeling tool, PatchSorter, which integrates deep learning with an intuitive web interface. Using >100,000 objects, we demonstrate a >7x improvement in labels per second over unaided labeling, with minimal impact on labeling accuracy, thus enabling high-throughput labeling of large datasets.
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