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Linkage-learning genetic algorithm application to the protein structure prediction problem

Published: 01 March 2001 Publication History
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References

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Brinkman, Donald J., Genetic Algorithms and Their Application to the Protein Folding Problem. MS Thesis, AFIT/GCS/ENG/93-D, School of Engineering, Air Force Institute of Technology (AETC), Wright-Patterson AFB, OH, December 1993.
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Brooks, Bernard; Bruccoleri, Robert, Olafson, Barry; States, David; Swaminathan S., Karplus, Martin. "CHARMM A Program for Macromolecular Energy, Minimization, and Dynamics Calculations" Journal of Computational Chemistry, Vol 4, No 2, John Wiley and Sons, INC. 1983, pg. 187-217.
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Committee on Physical, Mathematical, and Engineering Sciences. "Grand Challenges 1993: High Performance Computing and Communications." Office of Science and Technology Policy, 1992.
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Deerman, Karl R., Protein Structure Prediction Using Parallel Linkage Investigating Genetic Algorithms. AFIT/GCS/ENG/99M-03, School of Engineering, Air Force Institute of Technology (AETC), Wright-Patterson AFB, OH, March 1999.
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Gates, George Jr., Predicting Protein Structure Using Parallel Genetic Algorithms. MS Thesis, AFIT/GCS/ENG/95- D, School of Engineering, Air Force Institute of Technology (AETC), Wright-Patterson AFB, OH, December 1994.
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Harik, Georges R.; Goldberg, David E.; "Learning Linkage" Department of General Engineering, University of Illinois at Urbana-Champaign. August 1996
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Harik, Georges R., "Learning Gene Linkage to Efficiently Solve Problems of Bounded Difficulty Using Genetic Algorithms" Phd. Dissertation, The University of Michigan, Ann Arbor, MI, 1997.
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Kaiser, Charles Jr., Refined Genetic Algorithms for Polvpeptide Structure Prediction. AFIT/GCS/ENG/96D- 13, School of Engineering, Air Force Institute of Technology (AETC), Wright-Patterson AFB, OH, December 1996.
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Kaiser, Charles; Lamont, Gary; Merkle, Laurence; Gates, George; Pachter, Ruth; "Polypeptide Structure Prediction: Real-Value Versus Binary Hybrid Genetic Algorithms" ACM Symposium on Applied Computing, February 1997.
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Kaiser, Charles; Merkle, Laurence; Lamont, Gary; Gates, George; Pachter, Ruth; "Case Studies in Protein Structure Prediction with Real-Valued Genetic Algorithms" SIAM Conference on Parallel Processing for Scientific Computing, March 1997.
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Neumaier, Arnold; "Molecular Modeling of Proteins and Mathematical Prediction of Protein Structure" Society for Industrial and Applied Mathematics Review, volume 39, number 3, September 97.
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Cited By

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  • (2018)3D shape segmentation using multiple random walkersJournal of Computational and Applied Mathematics10.1016/j.cam.2017.03.025329:C(353-363)Online publication date: 1-Feb-2018
  • (2017)Hidden Markov model and Chapman Kolmogrov for protein structures prediction from imagesComputational Biology and Chemistry10.1016/j.compbiolchem.2017.04.00368:C(231-244)Online publication date: 1-Jun-2017
  • (2005)Mapping of Genetic Algorithms for Protein Folding onto Computational GridsTENCON 2005 - 2005 IEEE Region 10 Conference10.1109/TENCON.2005.301154(1-6)Online publication date: Nov-2005

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cover image ACM Conferences
SAC '01: Proceedings of the 2001 ACM symposium on Applied computing
March 2001
692 pages
ISBN:1581132875
DOI:10.1145/372202
Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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Published: 01 March 2001

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  1. genetic algorithms
  2. linkage-learning
  3. protein structure prediction

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View all
  • (2018)3D shape segmentation using multiple random walkersJournal of Computational and Applied Mathematics10.1016/j.cam.2017.03.025329:C(353-363)Online publication date: 1-Feb-2018
  • (2017)Hidden Markov model and Chapman Kolmogrov for protein structures prediction from imagesComputational Biology and Chemistry10.1016/j.compbiolchem.2017.04.00368:C(231-244)Online publication date: 1-Jun-2017
  • (2005)Mapping of Genetic Algorithms for Protein Folding onto Computational GridsTENCON 2005 - 2005 IEEE Region 10 Conference10.1109/TENCON.2005.301154(1-6)Online publication date: Nov-2005

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