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Enhancing Metadata Transfer Efficiency: Unlocking the Potential of DAOS in the ADIOS context

Published: 12 November 2023 Publication History

Abstract

In HPC, data movement between applications is typically facilitated by I/O middleware, such as the Adaptable I/O System (ADIOS). This middleware leverages the capabilities of the underlying storage services, to facilitate data movement and distribution. A recent storage system, Intel DAOS, promises to deliver new capabilities for achieving performance and scalability on emerging memory/storage systems. DAOS has already deployed in University of Cambridge, TACC, and the upcoming Aurora supercomputer. This paper investigates the performance tradeoffs associated with mapping ADIOS over one of the many different DAOS interfaces and data models, and makes recommendations for their efficient use.

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MP4 File
Recording of "Enhancing Metadata Transfer Efficiency: Unlocking the Potential of DAOS in the ADIOS context" presentation at PDSW 2023.

References

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Sadaf R Alam, Hussein N El-Harake, Kristopher Howard, Neil Stringfellow, and Fabio Verzelloni. 2011. Parallel I/O and the metadata wall. In Proceedings of the sixth workshop on Parallel Data Storage. 13–18.
[2]
Michael Hennecke. 2020. Daos: A scale-out high performance storage stack for storage class memory. Supercomputing frontiers (2020), 40.
[3]
Jialin Liu, Quincey Koziol, Gregory F. Butler, Neil Fortner, Mohamad Chaarawi, Houjun Tang, Suren Byna, Glenn K. Lockwood, Ravi Cheema, Kristy A. Kallback-Rose, Damian Hazen, and Mr Prabhat. 2018. Evaluation of HPC Application I/O on Object Storage Systems. In 2018 IEEE/ACM 3rd International Workshop on Parallel Data Storage and Data Intensive Scalable Computing Systems (PDSW-DISCS). 24–34. https://doi.org/10.1109/PDSW-DISCS.2018.00005
[4]
Qing Liu, Jeremy Logan, Yuan Tian, Hasan Abbasi, Norbert Podhorszki, Jong Youl Choi, Scott Klasky, Roselyne Tchoua, Jay Lofstead, Ron Oldfield, 2014. Hello ADIOS: the challenges and lessons of developing leadership class I/O frameworks. Concurrency and Computation: Practice and Experience 26, 7 (2014), 1453–1473.
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Ricardo Macedo, Mariana Miranda, Yusuke Tanimura, Jason Haga, Amit Ruhela, Stephen Lien Harrell, Richard Todd Evans, José Pereira, and Joao Paulo. 2023. Taming Metadata-intensive HPC Jobs Through Dynamic, Application-agnostic QoS Control. In 23nd IEEE International Symposium on Cluster, Cloud and Internet Computing (CCGrid). IEEE.
[6]
Jerome Soumagne, Jordan Henderson, Mohamad Chaarawi, Neil Fortner, Scot Breitenfeld, Songyu Lu, Dana Robinson, Elena Pourmal, and Johann Lombardi. 2021. Accelerating hdf5 i/o for exascale using daos. IEEE Transactions on Parallel and Distributed Systems 33, 4 (2021), 903–914.
[7]
Ranjan Sarpangala Venkatesh, Tony Mason, Pradeep Fernando, Greg Eisenhauer, and Ada Gavrilovska. 2021. Scheduling HPC Workflows with Intel Optane Persistent Memory. In 2021 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW). IEEE, 56–65.

Cited By

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  • (2024)Reducing the Impact of I/O Contention in Numerical Weather Prediction Workflows at Scale Using DAOSProceedings of the Platform for Advanced Scientific Computing Conference10.1145/3659914.3659926(1-12)Online publication date: 3-Jun-2024

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Published In

cover image ACM Other conferences
SC-W '23: Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis
November 2023
2180 pages
ISBN:9798400707858
DOI:10.1145/3624062
Publication rights licensed to ACM. ACM acknowledges that this contribution was authored or co-authored by an employee, contractor or affiliate of the United States government. As such, the Government retains a nonexclusive, royalty-free right to publish or reproduce this article, or to allow others to do so, for Government purposes only.

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Association for Computing Machinery

New York, NY, United States

Publication History

Published: 12 November 2023

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Author Tags

  1. ADIOS
  2. DAOS
  3. Data management
  4. HPC metadata
  5. I/O middleware

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  • (2024)Reducing the Impact of I/O Contention in Numerical Weather Prediction Workflows at Scale Using DAOSProceedings of the Platform for Advanced Scientific Computing Conference10.1145/3659914.3659926(1-12)Online publication date: 3-Jun-2024

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