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Classification of Alzheimer's Disease via Vision Transformer: Classification of Alzheimer's Disease via Vision Transformer

Published: 11 July 2022 Publication History

Abstract

Deep models are powerful in capturing the complex and non-linear relationship buried in brain imaging data. However, the huge number of parameters in deep models can easily overfit given limited imaging data samples. In this work, we proposed a cross-domain transfer learning method to solve the insufficient data problem in brain imaging domain by leveraging the knowledge learned in natural image domain. Specifically, we employed ViT as the backbone and firstly pretrained it using ImageNet-21K dataset and then transferred to the brain imaging dataset. A slice-wise convolution embedding method was developed to improve the standard patch operation in vanilla ViT. Our method was evaluated based on AD/CN classification task. We also conducted extensive experiments to compare the transfer performance with different transfer strategies, models, and sample size. The results suggest that the proposed method can effectively transfer the knowledge learned in natural image domain to brain imaging area and may provide a promising way to take advantages of the pretrained model in data-intensive applications. Moreover, the proposed cross-domain transfer learning method can obtain comparable classification performance compared to most recent studies.

References

[1]
Lu Zhang, Li Wang, and Dajiang Zhu., 2020, Recovering Brain Structural Connectivity from Functional Connectivity via Multi-GCN Based Generative Adversarial Network. In Medical Image Computing and Computer Assisted Intervention – MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part VII. Springer-Verlag, Berlin, Heidelberg, 53–61. https://doi.org/10.1007/978-3-030-59728-3_6
[2]
Zhang, L., Wang, L., & Zhu, D., 2020, Jointly Analyzing Alzheimer's Disease Related Structure-Function Using Deep Cross-Model Attention Network. 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 563-567.
[3]
Zhang, L., Zaman, A., Wang, L., Yan, J. and Zhu, D., 2019, October. A Cascaded Multi-Modality Analysis in Mild Cognitive Impairment. In International Workshop on Machine Learning in Medical Imaging (pp. 557-565). Springer, Cham.
[4]
Zhang, L., Wang, L., Gao, J., Risacher, S.L., Yan, J., Li, G., Liu, T., Zhu, D. and Alzheimer's Disease Neuroimaging Initiative, 2021. Deep fusion of brain structure-function in mild cognitive impairment. Medical image analysis, 72, p.102082.
[5]
Wang, L., Zhang, L. and Zhu, D., 2020, April. Learning Latent Structure Over Deep Fusion Model of Mild Cognitive Impairment. In 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI) (pp. 1039-1043). IEEE.
[6]
Zaman, A., Zhang, L., Yan, J. and Zhu, D., 2019, October. Multi-modal Image Prediction via Spatial Hybrid U-Net. In International Workshop on Multiscale Multimodal Medical Imaging (pp. 1-9). Springer, Cham.Prokop, Emily. 2018. The Story Behind. Mango Publishing Group. Florida, USA.
[7]
Wang, L., Zhang, L. and Zhu, D., 2019, April. Accessing Latent Connectome of Mild Cognitive Impairment via Discriminant Structure Learning. In 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019) (pp. 164-168). IEEE
[8]
Hugo Touvron, Matthieu Cord, Matthijs Douze, Francisco Massa, Alexandre Sablayrolles, and Herve J ´ egou. Training ´ data-efficient image transformers & distillation through attention. arXiv preprint arXiv:2012.12877, 2020.
[9]
Pan, S.J. and Yang, Q., 2009. A survey on transfer learning. IEEE Transactions on knowledge and data engineering, 22(10), pp.1345-1359.
[10]
Wu, Haiping and Xiao, Bin and Codella, Noel and Liu, Mengchen and Dai, Xiyang and Yuan, Lu and Zhang, Lei. 2021. CvT: Introducing Convolutions to Vision Transformers, Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV), 22-31.
[11]
Tete Xiao and Piotr Dollar and Mannat Singh and Eric Mintun and Trevor Darrell and Ross Girshick, 2021, Early Convolutions Help Transformers See Better, Advances in Neural Information Processing Systems.
[12]
Alexey Dosovitskiy and Lucas Beyer and Alexander Kolesnikov and Dirk Weissenborn and Xiaohua Zhai and Thomas Unterthiner and Mostafa Dehghani and Matthias Minderer and Georg Heigold and Sylvain Gelly and Jakob Uszkoreit and Neil Houlsby, 2020, An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale, CoRR, abs/2010.11929
[13]
ADNI | Alzheimer's Disease Neuroimaging Initiative, http://adni.loni.usc.edu
[14]
Vaswani, Ashish and Shazeer, Noam and Parmar, Niki and Uszkoreit, Jakob and Jones, Llion and Gomez, Aidan N and Kaiser, L ukasz and Polosukhin, Illia, 2017, Attention is All you Need, Advances in Neural Information Processing Systems.
[15]
Kaiming He, Xiangyu Zhang, Shaoqing Ren, and Jian Sun. Deep residual learning for image recognition. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pages 770–778, 2016.
[16]
Jimmy Lei Ba, Jamie Ryan Kiros, and Geoffrey E Hinton. Layer normalization. arXiv preprint arXiv:1607.06450, 2016
[17]
He, Kaiming and Zhang, Xiangyu and Ren, Shaoqing and Sun, Jian, 2016, Deep Residual Learning for Image Recognition, Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2016, pp. 770-778
[18]
Liu M, Zhang J, Adeli E, Shen D. Joint Classification and Regression via Deep Multi-Task Multi-Channel Learning for Alzheimer's Disease Diagnosis. IEEE Trans Biomed Eng. 2019 May;66(5):1195-1206. Epub 2018 Sep 12. 30222548; PMCID: PMC6764421.
[19]
Basaia S, Agosta F, Wagner L, Canu E, Magnani G, Santangelo R, Filippi M; Alzheimer's Disease Neuroimaging Initiative. Automated classification of Alzheimer's disease and mild cognitive impairment using a single MRI and deep neural networks. Neuroimage Clin. 2019;21:101645. Epub 2018 Dec 18. 30584016; PMCID: PMC6413333.
[20]
C. Lian, M. Liu, J. Zhang and D. Shen, 2020, Hierarchical Fully Convolutional Network for Joint Atrophy Localization and Alzheimer's Disease Diagnosis Using Structural MRI, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 42, no. 4, pp. 880-893.

Cited By

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  • (2025)Hybrid-RViT: Hybridizing ResNet-50 and Vision Transformer for Enhanced Alzheimer’s disease detectionPLOS ONE10.1371/journal.pone.031899820:2(e0318998)Online publication date: 14-Feb-2025
  • (2024)DE-ViT: State-Of-The-Art Vision Transformer Model for Early Detection of Alzheimer's Disease2024 National Conference on Communications (NCC)10.1109/NCC60321.2024.10485683(1-6)Online publication date: 28-Feb-2024
  • (2024)Pvtad: Alzheimer’s Disease Diagnosis Using Pyramid Vision Transformer Applied to White Matter of T1-Weighted Structural Mri Data2024 IEEE International Symposium on Biomedical Imaging (ISBI)10.1109/ISBI56570.2024.10635541(1-4)Online publication date: 27-May-2024
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PETRA '22: Proceedings of the 15th International Conference on PErvasive Technologies Related to Assistive Environments
June 2022
704 pages
ISBN:9781450396318
DOI:10.1145/3529190
Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than the author(s) must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected].

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Published: 11 July 2022

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Cited By

View all
  • (2025)Hybrid-RViT: Hybridizing ResNet-50 and Vision Transformer for Enhanced Alzheimer’s disease detectionPLOS ONE10.1371/journal.pone.031899820:2(e0318998)Online publication date: 14-Feb-2025
  • (2024)DE-ViT: State-Of-The-Art Vision Transformer Model for Early Detection of Alzheimer's Disease2024 National Conference on Communications (NCC)10.1109/NCC60321.2024.10485683(1-6)Online publication date: 28-Feb-2024
  • (2024)Pvtad: Alzheimer’s Disease Diagnosis Using Pyramid Vision Transformer Applied to White Matter of T1-Weighted Structural Mri Data2024 IEEE International Symposium on Biomedical Imaging (ISBI)10.1109/ISBI56570.2024.10635541(1-4)Online publication date: 27-May-2024
  • (2024)VisTAD: A Vision Transformer Pipeline for the Classification of Alzheimer’s Disease2024 International Joint Conference on Neural Networks (IJCNN)10.1109/IJCNN60899.2024.10650975(1-8)Online publication date: 30-Jun-2024
  • (2024)Alzheimer’s disease detection and stage identification from magnetic resonance brain images using vision transformerMachine Learning: Science and Technology10.1088/2632-2153/ad5fdc5:3(035011)Online publication date: 16-Jul-2024
  • (2024)Joint transformer architecture in brain 3D MRI classification: its application in Alzheimer’s disease classificationScientific Reports10.1038/s41598-024-59578-314:1Online publication date: 18-Apr-2024
  • (2024)Investigating Deep Learning for Early Detection and Decision-Making in Alzheimer’s Disease: A Comprehensive ReviewNeural Processing Letters10.1007/s11063-024-11600-556:3Online publication date: 24-Apr-2024
  • (2024)A systematic review of vision transformers and convolutional neural networks for Alzheimer’s disease classification using 3D MRI imagesNeural Computing and Applications10.1007/s00521-024-10420-x36:35(21985-22012)Online publication date: 17-Sep-2024
  • (2024)Alzheimer’s Disease Classification Using Vision TransformerInnovations in Cybersecurity and Data Science10.1007/978-981-97-5791-6_41(561-583)Online publication date: 13-Dec-2024
  • (2024)EDoViT-Alz: Alzheimer’s Disease Identification with Vision Transformer Using Extremely Downscaled MRI DataAdvances on P2P, Parallel, Grid, Cloud and Internet Computing10.1007/978-3-031-76462-2_10(109-120)Online publication date: 17-Nov-2024
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