Article

Grid-based management of biomedical data using an XML-based distributed data management system

Authors:

Shannon Hastings,

Stephen Langella,

Umit Catalyurek,

Joel SaltzAuthors Info & Claims

SAC '05: Proceedings of the 2005 ACM symposium on Applied computing

Pages 105 - 109

https://doi.org/10.1145/1066677.1066707

Published: 13 March 2005 Publication History

Abstract

This paper presents the application of a generic, XML-based distributed data management system for Grid-enabled management and integration of biomedical data, including image, molecular, and outcome data. We discuss the use of this system in three inter-related application scenarios: Management of large-scale image data, access to data from Internet-based bioinformatic data repositories, and integrating clinical data stored in an enterprise information warehouse into translational research.

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Cited By

Thurk FKampusch SKaniusas E(2015)Strategic framework for management of hybrid biosignals from study design to statistics2015 IEEE Sensors Applications Symposium (SAS)10.1109/SAS.2015.7133580(1-5)Online publication date: Apr-2015
https://doi.org/10.1109/SAS.2015.7133580
Slaymaker MPower DRussell DWilson GSimpson AWainwright RHaddad H(2008)Accessing and aggregating legacy data sources for healthcare research, delivery and trainingProceedings of the 2008 ACM symposium on Applied computing10.1145/1363686.1363994(1317-1324)Online publication date: 16-Mar-2008
https://dl.acm.org/doi/10.1145/1363686.1363994
Ahmed WLenz DLiu JRobinson JGhafoor A(2008)XML-Based Data Model and Architecture for a Knowledge-Based Grid-Enabled Problem-Solving Environment for High-Throughput Biological ImagingIEEE Transactions on Information Technology in Biomedicine10.1109/TITB.2007.90415312:2(226-240)Online publication date: 1-Mar-2008
https://dl.acm.org/doi/10.1109/TITB.2007.904153
Show More Cited By

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Information

Published In

cover image ACM Conferences

SAC '05: Proceedings of the 2005 ACM symposium on Applied computing

March 2005

1814 pages

ISBN:1581139640

DOI:10.1145/1066677

Conference Chair:
Hisham M. Haddad
Kennesaw State University
,
Editor:
Lorie M. Liebrock
New Mexico Institute of Mining and Technology, Socorro, NM
,
Program Chairs:
Andrea Omicini
Alma Mater Studiorum, Universita di Bologna, Italy
,
Roger L. Wainwright
Univerity of Tulsa, OK

Copyright © 2005 ACM.

Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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Publication History

Published: 13 March 2005

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SAC05: The 2005 ACM Symposium on Applied Computing

March 13 - 17, 2005

New Mexico, Santa Fe

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Cited By

Thurk FKampusch SKaniusas E(2015)Strategic framework for management of hybrid biosignals from study design to statistics2015 IEEE Sensors Applications Symposium (SAS)10.1109/SAS.2015.7133580(1-5)Online publication date: Apr-2015
https://doi.org/10.1109/SAS.2015.7133580
Slaymaker MPower DRussell DWilson GSimpson AWainwright RHaddad H(2008)Accessing and aggregating legacy data sources for healthcare research, delivery and trainingProceedings of the 2008 ACM symposium on Applied computing10.1145/1363686.1363994(1317-1324)Online publication date: 16-Mar-2008
https://dl.acm.org/doi/10.1145/1363686.1363994
Ahmed WLenz DLiu JRobinson JGhafoor A(2008)XML-Based Data Model and Architecture for a Knowledge-Based Grid-Enabled Problem-Solving Environment for High-Throughput Biological ImagingIEEE Transactions on Information Technology in Biomedicine10.1109/TITB.2007.90415312:2(226-240)Online publication date: 1-Mar-2008
https://dl.acm.org/doi/10.1109/TITB.2007.904153
Moretto EDe Carvalho Alegro MHira ADe Mello AKondo MCamanho PLeitão AZuffo M(2007)A Web-based system for the consolidation of hospital-based cancer registries in BrazilJournal of Telemedicine and Telecare10.1258/13576330778324737413:3_suppl(65-67)Online publication date: 1-Dec-2007
https://doi.org/10.1258/135763307783247374
Hastings SOster SLangella SErvin DKurc TSaltz J(2007)Introduce: An Open Source Toolkit for Rapid Development of Strongly Typed Grid ServicesJournal of Grid Computing10.1007/s10723-007-9074-85:4(407-427)Online publication date: 9-Mar-2007
https://doi.org/10.1007/s10723-007-9074-8
Sun YJensen SPallickara SPlale B(2006)Personal Workspace for Large-Scale Data-Driven Computational ExperimentProceedings of the 7th IEEE/ACM International Conference on Grid Computing10.1109/ICGRID.2006.311005(112-119)Online publication date: 28-Sep-2006
https://dl.acm.org/doi/10.1109/ICGRID.2006.311005
Wang FLiu PPearson JAzar FMadlmayr G(2006)Experiment Management with Metadata-based Integration for Collaborative Scientific ResearchProceedings of the 22nd International Conference on Data Engineering10.1109/ICDE.2006.65Online publication date: 3-Apr-2006
https://dl.acm.org/doi/10.1109/ICDE.2006.65

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