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Owen White
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- affiliation: University of Maryland, Baltimore, MA, USA
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2020 – today
- 2023
- [j18]Seth A. Ament
, Ricky S. Adkins, Robert Carter
The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 51(D1): 1075-1085 (2023) - 2022
- [c3]Michelle G. Giglio, Suvarna Nadendla, Arthur Brady, Amanda Charbonneau, Karl Czajkowski, Jeremy Yang, Tom Gillespie, Philippe Rocca-Serra, Jeffrey S. Grethe, Raja Mazumder, Bernard de Bono, Jonathan C. Silverstein, Daniel Clark, Mark A. Musen, Owen White:
Data Harmonization through Use of Community Standards in the Common Fund Data Ecosystem. ICBO 2022: 1-7 - 2021
- [j17]Heather Huot Creasy
HMPDACC: a Human Microbiome Project Multi-omic data resource. Nucleic Acids Res. 49(Database-Issue): D734-D742 (2021)
2010 – 2019
- 2014
- [j16]Marcus C. Chibucos
Standardized description of scientific evidence using the Evidence Ontology (ECO). Database J. Biol. Databases Curation 2014 (2014) - [j15]Jonathan Crabtree, Sonia Agrawal
Circleator: flexible circular visualization of genome-associated data with BioPerl and SVG. Bioinform. 30(21): 3125-3127 (2014) - [j14]Katherine Huang, Arthur Brady
MetaRef: a pan-genomic database for comparative and community microbial genomics. Nucleic Acids Res. 42(Database-Issue): 617-624 (2014) - 2012
- [j13]Sahar Abubucker, Nicola Segata
Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome. PLoS Comput. Biol. 8(6) (2012) - 2011
- [j12]Pascale Gaudet, Amos Bairoch
Towards BioDBcore: a community-defined information specification for biological databases. Database J. Biol. Databases Curation 2011 (2011) - [j11]Samuel V. Angiuoli
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing. BMC Bioinform. 12: 356 (2011) - [j10]Pascale Gaudet, Amos Bairoch
Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res. 39(Database-Issue): 7-10 (2011) - 2010
- [j9]Joshua Orvis, Jonathan Crabtree, Kevin Galens, Aaron Gussman, Jason M. Inman, Eduardo Lee, Sreenath Nampally, David R. Riley, Jaideep P. Sundaram, Victor Felix, Brett Whitty
Ergatis: a web interface and scalable software system for bioinformatics workflows. Bioinform. 26(12): 1488-1492 (2010) - [j8]Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Robert Montgomery, Nikhat Zafar, Qi Yang, Ramana Madupu, Phil Goetz, Kevin Galinsky, Owen White, Granger G. Sutton:
The comprehensive microbial resource. Nucleic Acids Res. 38(Database-Issue): 340-345 (2010) - [j7]Lauren M. Brinkac, Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Elisabet Caler, Robert J. Dodson, A. Scott Durkin, Derek M. Harkins, Hernan Lorenzi
Pathema: a clade-specific bioinformatics resource center for pathogen research. Nucleic Acids Res. 38(Database-Issue): 408-414 (2010) - [j6]Lynn M. Schriml
GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database. Nucleic Acids Res. 38(Database-Issue): 754-764 (2010)
2000 – 2009
- 2007
- [j5]Jeremy D. Selengut, Daniel H. Haft
TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes. Nucleic Acids Res. 35(Database-Issue): 260-264 (2007) - [c2]Lynn M. Schriml, Aaron Gussman, Kathy Phillippy, Samuel V. Angiuoli, Kumar Hari, Alan Goates, Ravi Jain, Tanja Davidsen, Anurhada Ganapathy, Elodie Ghedin
Gemina: A Web-Based Epidemiology and Genomic Metadata System Designed to Identify Infectious Agents. BioSurveillance 2007: 228-229 - 2005
- [j4]Daniel H. Haft
Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics. Bioinform. 21(3): 293-306 (2005) - 2003
- [j3]Daniel H. Haft
The TIGRFAMs database of protein families. Nucleic Acids Res. 31(1): 371-373 (2003) - [c1]Owen White:
Bacterial Annotation Tools. German Conference on Bioinformatics 2003: 187 - 2001
- [j2]Daniel H. Haft, Brendan J. Loftus
TIGRFAMs: a protein family resource for the functional identification of proteins. Nucleic Acids Res. 29(1): 41-43 (2001) - [j1]Jeremy D. Peterson, Lowell A. Umayam, Tanja Dickinson, Erin K. Hickey, Owen White:
The Comprehensive Microbial Resource. Nucleic Acids Res. 29(1): 123-125 (2001)
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