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William D. Duncan
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2020 – today
- 2024
- [j18]William D. Duncan, Matthew Diller, Damion M. Dooley, William R. Hogan, John Beverley
:
Concretizing plan specifications as realizables within the OBO foundry. J. Biomed. Semant. 15(1): 15 (2024) - [j17]Sabrina Toro, Anna V. Anagnostopoulos, Susan M. Bello, Kai Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris, Marcin P. Joachimiak, Leila Kiani, Tiago Lubiana, Monica C. Munoz-Torres, Shawn T. O'Neil, David Osumi-Sutherland, Aleix Puig-Barbe, Justin T. Reese, Leonore Reiser, Sofia M. C. Robb, Troy Ruemping, James Seager, Eric Sid, Raymund Stefancsik, Magalie Weber, Valerie Wood, Melissa A. Haendel, Christopher J. Mungall:
Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI). J. Biomed. Semant. 15(1): 19 (2024) - [j16]Alexander Bartnik, Lucas M. Serra, Mackenzie T. Smith, William D. Duncan, Lauren Wishnie, Alan Ruttenberg, Michael G. Dwyer, Alexander D. Diehl:
MRIO: the Magnetic Resonance Imaging Acquisition and Analysis Ontology. Neuroinformatics 22(3): 269-283 (2024) - [e2]Alexander D. Diehl, William D. Duncan, Yongqun Oliver He:
Proceedings of the International Conference on Biomedical Ontology 2022 (ICBO), Ann Arbor, Michigan, USA, September 25 - 28, 2022. CEUR Workshop Proceedings 3805, CEUR-WS.org 2024 [contents] - [i4]John Beverley, Robin McGill, Sam Smith, Jie Zheng, Giacomo De Colle, Finn Wilson, Matthew Diller, William D. Duncan, William R. Hogan, Yongqun He:
Credentials in the Occupation Ontology. CoRR abs/2405.00186 (2024) - 2023
- [j15]Lauren E. Chan, Anne E. Thessen, William D. Duncan, Nicolas Matentzoglu
The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond. J. Biomed. Semant. 14(1): 3 (2023) - [c21]John Beverley, Sam Smith, Matthew Diller, William D. Duncan, Jie Zheng, John W. Judkins, William R. Hogan, Robin McGill, Damion M. Dooley, Yongqun He:
The Occupation Ontology (OccO): Building a Bridge between Global Occupational Standards. JOWO 2023 - [i3]Sabrina Toro, Anna V. Anagnostopoulos, Sue Bello, Kai Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris
Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI). CoRR abs/2312.10904 (2023) - 2022
- [j14]Nicolas Matentzoglu
A Simple Standard for Sharing Ontological Mappings (SSSOM). Database J. Biol. Databases Curation 2022(2022) (2022) - [j13]Nicolas Matentzoglu
Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies. Database J. Biol. Databases Curation 2022(2022) (2022) - [j12]Yongqun He, Hong Yu, Anthony Huffman, Asiyah Yu Lin, Darren A. Natale
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology. J. Biomed. Semant. 13(1): 25 (2022) - [c20]Alexander Bartnik, Lucas M. Serra, Mackenzie T. Smith, William D. Duncan, Alan Ruttenberg, Michael G. Dwyer, Alexander D. Diehl:
Development of an Image Data Set Class: Its Role in Biomedical Imaging and Neuroimaging Research. ICBO 2022: 1-9 - [c19]James A. Overton, Rebecca C. Jackson, Nicolas Matentzoglu, William D. Duncan, Randi Vita, Nomi L. Harris, Christopher J. Mungall, Bjoern Peters:
COB: A Core Ontology for Biology and Biomedicine. ICBO 2022: 1 - [i2]Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris
Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies. CoRR abs/2207.02056 (2022) - 2021
- [j11]Rebecca C. Jackson
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database J. Biol. Databases Curation 2021 (2021) - [j10]Bin Hu
Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale. Frontiers Bioinform. 1 (2021) - [c18]Lauren E. Chan, Nicole A. Vasilevsky, Anne E. Thessen, Nicolas Matentzoglu, William D. Duncan, Christopher J. Mungall, Melissa A. Haendel:
A Semantic Model Leveraging Pattern-based Ontology Terms to Bridge Environmental Exposures and Health Outcomes. ICBO 2021: 48-55 - [c17]Asiyah Yu Lin, Yuki Yamagata, William D. Duncan, Leigh C. Carmody, Tatsuya Kushida, Hiroshi Masuya, John Beverley, Biswanath Dutta, Michael DeBellis, Zoë May Pendlington, Paola Roncaglia, Yongqun He:
A Community Effort for COVID-19 Ontology Harmonization. ICBO 2021: 122-127 - [c16]Marcin P. Joachimiak, Harshad Hegde, William D. Duncan, Justin T. Reese, Luca Cappelletti, Anne E. Thessen, Christopher J. Mungall:
KG-Microbe: A Reference Knowledge-Graph and Platform for Harmonized Microbial Information. ICBO 2021: 131-133 - [c15]William D. Duncan, Faiza Ahmed, Fnu Anubhav, Jeffrey Baumes, Jonathan Beezley, Mark Borkum, Lisa M. Bramer, Shane Canon, Patrick S. G. Chain, Danielle Christianson, Yuri Corilo, Karen Davenport, Brandon Davis, Meghan Drake, Kjiersten Fagnan, Mark Flynn, David Hays, Bin Hu, Marcel Huntemann, Julia Kelliher, Sofya Lebedeva, Po-E Li, Mary Lipton, Chien-Chi Lo, Douglas Mans, Stanton Martin, Lee Ann McCue, David Millard, Kayd Miller, Nigel Mouncey, Paul D. Piehowski, Elais Player Jackson, Anastasiya Prymolenna, Samuel O. Purvine, T. B. K. Reddy, Rachel Richardson, Migun Shakya, Montana Smith, Jagadish Chandrabose Sundaramurthi, Mark A. Miller, Deepak R. Unni, Pajau Vangay, Bruce Wilson, Donald Winston, Elisha M. Wood-Charlson, Yan Xu, Emiley A. Eloe-Fadrosh, Christopher J. Mungall:
Leveraging Ontologies within the National Microbiome Data Collaborative. ICBO 2021: 141-143 - [c14]Sierra A. T. Moxon, Harold Solbrig, Deepak R. Unni, Dazhi Jiao, Richard M. Bruskiewich, James P. Balhoff, Gaurav Vaidya, William D. Duncan, Harshad Hegde, Mark Miller, Matthew H. Brush, Nomi L. Harris, Melissa A. Haendel, Christopher J. Mungall:
The Linked Data Modeling Language (LinkML): A General-Purpose Data Modeling Framework Grounded in Machine-Readable Semantics. ICBO 2021: 148-151 - [e1]Alexander D. Diehl, William D. Duncan, Gloria Sanso:
Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019), Buffalo, New York, USA, July 30 - August 2, 2019. CEUR Workshop Proceedings 2931, CEUR-WS.org 2021 [contents] - [i1]Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall:
A Simple Standard for Sharing Ontological Mappings (SSSOM). CoRR abs/2112.07051 (2021) - 2020
- [j9]Thankam Paul Thyvalikakath
Leveraging Electronic Dental Record Data for Clinical Research in the National Dental PBRN Practices. Appl. Clin. Inform. 11(02): 305-314 (2020) - [j8]William D. Duncan
Structuring, reuse and analysis of electronic dental data using the Oral Health and Disease Ontology. J. Biomed. Semant. 11(1): 8 (2020) - [c13]Yongqun He, Hong Yu, Edison Ong, Yang Wang, Yingtong Liu, Anthony Huffman, Hsin-Hui Huang, John Beverley, Asiyah Yu Lin, William D. Duncan, Sivaram Arabandi, Jiangan Xie, Junguk Hur, Xiaolin Yang, Luonan Chen, Gilbert S. Omenn, Brian D. Athey, Barry Smith:
CIDO: The Community-Based Coronavirus Infectious Disease Ontology. ICBO/ODLS 2020: 1-10
2010 – 2019
- 2019
- [j7]Lucas M. Serra, William D. Duncan, Alexander D. Diehl:
An ontology for representing hematologic malignancies: the cancer cell ontology. BMC Bioinform. 20-S(5): 231-236 (2019) - [j6]Yongqun He
OSCI: standardized stem cell ontology representation and use cases for stem cell investigation. BMC Bioinform. 20-S(5): 237-247 (2019) - [c12]Lucas M. Serra, Michael G. Dwyer, William D. Duncan, Alexander D. Diehl:
Early steps of an Ontology for Magnetic Resonance Imaging: MRIO. ICBO 2019: 1-5 - [c11]Mackenzie T. Smith, Lauren M. Wishnie, William D. Duncan, Mark Jensen, Alexander D. Diehl:
Tripartite Term Enrichment Analysis of Multiple Sclerosis Patient Reported Outcomes. ICBO 2019: 1 - 2018
- [c10]William D. Duncan, Thankam Thyvalikakath, Zasim Azhar Siddiqui, Michelle LaPradd, Chen Wen, Jim Zheng, Anna Roberts, Daniel Hood, Aparna Manimangala, Donald Rindal, Mark Jurkovich, Tracy Shea, David Bogacz, Terrence Yu, Jeffry Fellows, Valerie Gordan, Gregg H. Gilbert:
Using the Oral Health and Disease Ontology to Study Dental Outcomes in National Dental PBRN Practices. ICBO 2018 - [c9]William D. Duncan, Philip Whalen, Aditya Muralidharan, Jonathan Kiddy:
Enhancing Semantic Analysis of Pathology Reports. ICBO 2018 - [c8]J. Neil Otte, Cooper Stansbury, Jonathan Vajda, Frank J. Manion, Elizabeth Umberfield, Yongqun He, Marcelline R. Harris, Jihad S. Obeid, Mathias Brochhausen, William D. Duncan, Cui Tao:
Coordinated Evolution of Ontologies of Informed Consent. ICBO 2018 - 2017
- [j5]William D. Duncan:
Ontological distinctions between hardware and software. Appl. Ontology 12(1): 5-32 (2017) - [j4]Darren A. Natale
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities. Nucleic Acids Res. 45(Database-Issue): D339-D346 (2017) - [c7]William D. Duncan, Carmelo Gaudioso, Alexander D. Diehl:
Towards an Ontology for Representing Malignant Neoplasms. ICBO 2017 - 2016
- [j3]Patrick L. Ray, Alexander P. Cox, Mark Jensen, Travis Allen, William D. Duncan, Alexander D. Diehl
Representing vision and blindness. J. Biomed. Semant. 7: 15 (2016) - [c6]William D. Duncan, Travis Allen, Jonathan P. Bona, Olivia Helfer, Barry Smith, Alan Ruttenberg, Alexander D. Diehl:
The ImmPort Antibody Ontology. ICBO/BioCreative 2016 - 2014
- [c5]Mark Jensen, Alexander P. Cox, Jonathan P. Bona, William D. Duncan, Patrick L. Ray, Alexander D. Diehl:
Applications of OBI 'assay'. ICBO 2014: 96-98 - [c4]Erik Thomsen, Frederick Reed, William D. Duncan, Tatanya Malyuta, Barry Smith:
Ontological Support for Living Plan Specification, Execution and Evaluation. STIDS 2014: 10-17 - 2013
- [j2]Mark Jensen, Alexander P. Cox, Naveed Chaudhry, Marcus Ng, Donat Sule, William D. Duncan, Patrick Ray, Bianca Weinstock-Guttman, Barry Smith
The neurological disease ontology. J. Biomed. Semant. 4: 42 (2013) - [c3]William D. Duncan, Titus Schleyer, Alan Ruttenberg:
Representing Intracoronal Tooth Restorations in the Ontology for Oral Health and Disease. ICBO 2013: 109-112 - 2010
- [c2]Rouhshi Low
Protecting the protectors: Legal liabilities from the use of Web 2.0 for Australian disaster response. ISTAS 2010: 411-418
2000 – 2009
- 2007
- [c1]Mark Burdon
Access Control in Federated Databases: How Legal Issues Shape Security. EGOV 2007: 228-239 - 2006
- [j1]Martin P. Betts, Peter Black, Sharon Christensen, Ed Dawson, Rong Du, William D. Duncan, Ernest Foo, Juan Manuel González Nieto:
Towards Secure and Legal E-Tendering. J. Inf. Technol. Constr. 11: 89-102 (2006)
Coauthor Index
Chris Mungall
aka: Christopher J. Mungall
aka: Christopher J. Mungall
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last updated on 2024-11-08 21:32 CET by the dblp team
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