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Aron Marchler-Bauer
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2020 – today
- 2023
- [j47]Eric W. Sayers
, Evan E. Bolton
Database resources of the National Center for Biotechnology Information in 2023. Nucleic Acids Res. 51(D1): 29-38 (2023) - [j46]Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Noreen R. Gonzales, Marc Gwadz, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang, Dachuan Zhang, Chanjuan Zheng, Christopher J. Lanczycki, Aron Marchler-Bauer
The conserved domain database in 2023. Nucleic Acids Res. 51(D1): 384-388 (2023) - [j45]Typhaine Paysan-Lafosse
InterPro in 2022. Nucleic Acids Res. 51(D1): 418-427 (2023) - 2022
- [j44]Valérie de Crécy-Lagard
A roadmap for the functional annotation of protein families: a community perspective. Database J. Biol. Databases Curation 2022(2022) (2022) - [j43]Eric W. Sayers
Database resources of the national center for biotechnology information. Nucleic Acids Res. 50(D1): 20-26 (2022) - 2021
- [j42]Eric W. Sayers
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 49(Database-Issue): D10-D17 (2021) - [j41]Wenjun Li
RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation. Nucleic Acids Res. 49(Database-Issue): D1020-D1028 (2021) - [j40]Matthias Blum
The InterPro protein families and domains database: 20 years on. Nucleic Acids Res. 49(Database-Issue): D344-D354 (2021) - 2020
- [j39]Andrew F. Neuwald, Christopher J. Lanczycki, Theresa K. Hodges, Aron Marchler-Bauer:
Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments. Database J. Biol. Databases Curation 2020 (2020) - [j38]Jiyao Wang, Philippe Youkharibache, Dachuan Zhang, Christopher J. Lanczycki, Renata C. Geer, Thomas Madej, Lon Phan, Minghong Ward, Shennan Lu, Gabriele H. Marchler, Yanli Wang, Stephen H. Bryant, Lewis Y. Geer
iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures. Bioinform. 36(1): 131-135 (2020) - [j37]Shennan Lu, Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Mingzhang Yang
CDD/SPARCLE: the conserved domain database in 2020. Nucleic Acids Res. 48(Database-Issue): D265-D268 (2020)
2010 – 2019
- 2019
- [j36]Rezarta Islamaj Dogan
PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database. Database J. Biol. Databases Curation 2019: baz064 (2019) - [j35]Eric W. Sayers, Richa Agarwala
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 47(Database-Issue): D23-D28 (2019) - [j34]Alex L. Mitchell
InterPro in 2019: improving coverage, classification and access to protein sequence annotations. Nucleic Acids Res. 47(Database-Issue): D351-D360 (2019) - 2018
- [j33]Daniel H. Haft
RefSeq: an update on prokaryotic genome annotation and curation. Nucleic Acids Res. 46(Database-Issue): D851-D860 (2018) - 2017
- [j32]Robert D. Finn, Teresa K. Attwood
InterPro in 2017 - beyond protein family and domain annotations. Nucleic Acids Res. 45(Database-Issue): D190-D199 (2017) - [j31]Aron Marchler-Bauer
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures. Nucleic Acids Res. 45(Database-Issue): D200-D203 (2017) - 2015
- [j30]Myra K. Derbyshire, Noreen R. Gonzales, Shennan Lu, Jane He, Gabriele H. Marchler, Zhouxi Wang, Aron Marchler-Bauer
Improving the consistency of domain annotation within the Conserved Domain Database. Database J. Biol. Databases Curation 2015 (2015) - [j29]John H. Morris
cddApp: a Cytoscape app for accessing the NCBI conserved domain database. Bioinform. 31(1): 134-136 (2015) - [j28]Aron Marchler-Bauer
CDD: NCBI's conserved domain database. Nucleic Acids Res. 43(Database-Issue): 222-226 (2015) - 2014
- [j27]Thomas Madej, Christopher J. Lanczycki, Dachuan Zhang, Paul A. Thiessen, Renata C. Geer, Aron Marchler-Bauer
MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 42(Database-Issue): 297-303 (2014) - 2013
- [j26]Aron Marchler-Bauer
CDD: conserved domains and protein three-dimensional structure. Nucleic Acids Res. 41(Database-Issue): 348-352 (2013) - 2012
- [j25]Myra K. Derbyshire, Christopher J. Lanczycki, Stephen H. Bryant, Aron Marchler-Bauer
Annotation of functional sites with the Conserved Domain Database. Database J. Biol. Databases Curation 2012 (2012) - [j24]Andrew F. Neuwald, Christopher J. Lanczycki, Aron Marchler-Bauer
Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures. BMC Bioinform. 13: 144 (2012) - [j23]Eric W. Sayers, Tanya Barrett, Dennis A. Benson, Evan Bolton
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 40(Database-Issue): 13-25 (2012) - [j22]Thomas Madej, Kenneth J. Addess, Jessica H. Fong, Lewis Y. Geer
MMDB: 3D structures and macromolecular interactions. Nucleic Acids Res. 40(Database-Issue): 461-464 (2012) - [j21]Benjamin A. Shoemaker, Dachuan Zhang, Manoj Tyagi, Ratna R. Thangudu, Jessica H. Fong, Aron Marchler-Bauer
IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins. Nucleic Acids Res. 40(Database-Issue): 834-840 (2012) - 2011
- [j20]Viswanadham Sridhara
Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes. Database J. Biol. Databases Curation 2011 (2011) - [j19]Eric W. Sayers, Tanya Barrett, Dennis A. Benson, Evan Bolton, Stephen H. Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M. Church, Michael DiCuccio, Scott Federhen, Michael Feolo, Ian M. Fingerman, Lewis Y. Geer
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 39(Database-Issue): 38-51 (2011) - [j18]Aron Marchler-Bauer
CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 39(Database-Issue): 225-229 (2011) - 2010
- [j17]Eric W. Sayers, Tanya Barrett, Dennis A. Benson, Evan Bolton
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 38(Database-Issue): 5-16 (2010) - [j16]Lewis Y. Geer
The NCBI BioSystems database. Nucleic Acids Res. 38(Database-Issue): 492-496 (2010) - [j15]Benjamin A. Shoemaker, Dachuan Zhang, Ratna R. Thangudu, Manoj Tyagi, Jessica H. Fong, Aron Marchler-Bauer
Inferred Biomolecular Interaction Server - a web server to analyze and predict protein interacting partners and binding sites. Nucleic Acids Res. 38(Database-Issue): 518-524 (2010)
2000 – 2009
- 2009
- [j14]Mohamed Radhouene Aniba, Sophie Siguenza, Anne Friedrich, Frédéric Plewniak
Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis. Briefings Bioinform. 10(1): 11-23 (2009) - [j13]Jessica H. Fong, Aron Marchler-Bauer
CORAL: aligning conserved core regions across domain families. Bioinform. 25(15): 1862-1868 (2009) - [j12]Aron Marchler-Bauer
CDD: specific functional annotation with the Conserved Domain Database. Nucleic Acids Res. 37(Database-Issue): 205-210 (2009) - 2007
- [j11]Aron Marchler-Bauer
CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35(Database-Issue): 237-240 (2007) - [j10]Yanli Wang, Kenneth J. Addess, Jie Chen, Lewis Y. Geer
MMDB: annotating protein sequences with Entrez's 3D-structure database. Nucleic Acids Res. 35(Database-Issue): 298-300 (2007) - 2005
- [j9]Aron Marchler-Bauer
CDD: a Conserved Domain Database for protein classification. Nucleic Acids Res. 33(Database-Issue): 192-196 (2005) - 2004
- [j8]Aron Marchler-Bauer
CD-Search: protein domain annotations on the fly. Nucleic Acids Res. 32(Web-Server-Issue): 327-331 (2004) - 2003
- [j7]Aron Marchler-Bauer
CDD: a curated Entrez database of conserved domain alignments. Nucleic Acids Res. 31(1): 383-387 (2003) - [j6]Jie Chen, John B. Anderson, Carol DeWeese-Scott, Natalie D. Fedorova, Lewis Y. Geer
MMDB: Entrez's 3D-structure database. Nucleic Acids Res. 31(1): 474-477 (2003) - 2002
- [j5]Yanli Wang, John B. Anderson, Jie Chen, Lewis Y. Geer, Siqian He, David I. Hurwitz, Cynthia A. Liebert, Thomas Madej, Gabriele H. Marchler, Aron Marchler-Bauer, Anna R. Panchenko, Benjamin A. Shoemaker, James S. Song, Paul A. Thiessen, Roxanne A. Yamashita, Stephen H. Bryant:
MMDB: Entrez's 3D-structure database. Nucleic Acids Res. 30(1): 249-252 (2002) - [j4]Aron Marchler-Bauer, Anna R. Panchenko, Benjamin A. Shoemaker, Paul A. Thiessen, Lewis Y. Geer
CDD: a database of conserved domain alignments with links to domain three-dimensional structure. Nucleic Acids Res. 30(1): 281-283 (2002) - 2000
- [j3]Sarah J. Wheelan, Aron Marchler-Bauer, Stephen H. Bryant:
Domain size distributions can predict domain boundaries. Bioinform. 16(7): 613-618 (2000) - [j2]Yanli Wang, Kenneth J. Addess, Lewis Y. Geer, Thomas Madej, Aron Marchler-Bauer, Diane Zimmerman, Stephen H. Bryant:
MMDB: 3D structure data in Entrez. Nucleic Acids Res. 28(1): 243-245 (2000)
1990 – 1999
- 1999
- [j1]Aron Marchler-Bauer
MMDB: Entrez's 3D structure database. Nucleic Acids Res. 27(1): 240-243 (1999)
Coauthor Index
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last updated on 2024-10-07 22:07 CEST by the dblp team
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