default search action
Chengkun Wu
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
- [j31]Yishui Li
, Wei Wang
Pre-training molecular representation model with spatial geometry for property prediction. Comput. Biol. Chem. 109: 108023 (2024) - [j30]Jun Zhan
HFN: Heterogeneous feature network for multivariate time series anomaly detection. Inf. Sci. 670: 120626 (2024) - 2023
- [j29]Leyun Wu, Guangpu Wang, Liping Zhou, Mengxia Mo, Yulong Shi, Bo Li
Molecular dynamics study on the behavior and binding mechanism of target protein Transgelin-2 with its agonist TSG12 for anti-asthma drug discovery. Comput. Biol. Medicine 153: 106515 (2023) - [j28]Zhe Li
Free energy perturbation-based large-scale virtual screening for effective drug discovery against COVID-19. Int. J. High Perform. Comput. Appl. 37(1): 45-57 (2023) - [j27]Yishui Li, Runduo Liu, Jie Liu, Haibin Luo, Chengkun Wu, Zhe Li
An Open Source Graph-Based Weighted Cycle Closure Method for Relative Binding Free Energy Calculations. J. Chem. Inf. Model. 63(2): 561-570 (2023) - [c26]Yanlong Qiu
DrugProtKGE: Weakly Supervised Knowledge Graph Embedding for Highly-Effective Drug-Protein Interaction Representation. BIBM 2023: 1386-1393 - [c25]Jing-Lun Ma, Yanlong Qiu
BioNet+: A Comprehensive Interaction Model of Finding Therapeutics for Diseases with Graph Deep Learning. HPCC/DSS/SmartCity/DependSys 2023: 369-376 - 2022
- [j26]Xi Yang, Wei Wang, Jing-Lun Ma, Yan-Long Qiu
BioNet: a large-scale and heterogeneous biological network model for interaction prediction with graph convolution. Briefings Bioinform. 23(1) (2022) - [j25]Xiao-Chen Zhang
ABC-Net: a divide-and-conquer based deep learning architecture for SMILES recognition from molecular images. Briefings Bioinform. 23(2) (2022) - [j24]Zongren Li
DeepKG: an end-to-end deep learning-based workflow for biomedical knowledge graph extraction, optimization and applications. Bioinform. 38(5): 1477-1479 (2022) - [j23]Jia-Cai Yi
MICER: a pre-trained encoder-decoder architecture for molecular image captioning. Bioinform. 38(19): 4562-4572 (2022) - [j22]Yan-Long Qiu
A risk factor attention-based model for cardiovascular disease prediction. BMC Bioinform. 23-S(8): 425 (2022) - [j21]Lihuan Yuan
ParaCopasi: A package for parallel biochemical simulation and analysis. J. Comput. Chem. 43(2): 144-154 (2022) - [j20]Liping Zhou, Tingting Liu, Mengxia Mo, Yulong Shi, Leyun Wu, Yishui Li, Qiuping Qin
Exploring the Binding Affinity and Mechanism between ACE2 and the Trimers of Delta and Omicron Spike Proteins by Molecular Dynamics Simulation and Bioassay. J. Chem. Inf. Model. 62(18): 4512-4522 (2022) - [j19]Guo-Li Xiong
DDInter: an online drug-drug interaction database towards improving clinical decision-making and patient safety. Nucleic Acids Res. 50(D1): 1200-1207 (2022) - [c24]Guang Yu
Deep Anomaly Discovery from Unlabeled Videos via Normality Advantage and Self-Paced Refinement. CVPR 2022: 13967-13978 - [c23]Jun Zhan, Siqi Wang, Xiandong Ma, Chengkun Wu, Canqun Yang, Detian Zeng, Shilin Wang:
Stgat-Mad : Spatial-Temporal Graph Attention Network For Multivariate Time Series Anomaly Detection. ICASSP 2022: 3568-3572 - [c22]Qiucheng Miao
An Unsupervised Short- and Long-Term Mask Representation for Multivariate Time Series Anomaly Detection. ICONIP (6) 2022: 504-516 - [c21]Guang Yu
Effective Video Abnormal Event Detection by Learning A Consistency-Aware High-Level Feature Extractor. ACM Multimedia 2022: 6337-6346 - [i2]Qiucheng Miao
An Unsupervised Short- and Long-Term Mask Representation for Multivariate Time Series Anomaly Detection. CoRR abs/2208.09240 (2022) - [i1]Jun Zhan, Chengkun Wu, Canqun Yang, Qiucheng Miao
HFN: Heterogeneous Feature Network for Multivariate Time Series Anomaly Detection. CoRR abs/2211.00277 (2022) - 2021
- [j18]Chengkun Wu, Xiao-Chen Zhang, Zhi-Jiang Yang, Ai-Ping Lu, Tingjun Hou
Learning to SMILES: BAN-based strategies to improve latent representation learning from molecules. Briefings Bioinform. 22(6) (2021) - [j17]Xiao-Chen Zhang, Chengkun Wu
MG-BERT: leveraging unsupervised atomic representation learning for molecular property prediction. Briefings Bioinform. 22(6) (2021) - [j16]Chengkun Wu, Xinyi Xiao, Canqun Yang, Jinxiang Chen, Jiacai Yi, Yanlong Qiu
Mining microbe-disease interactions from literature via a transfer learning model. BMC Bioinform. 22(1): 432 (2021) - [j15]Xi Yang, Chengkun Wu, Goran Nenadic, Wei Wang, Kai Lu:
Correction to: Mining a stroke knowledge graph from literature. BMC Bioinform. 22(1): 585 (2021) - [j14]Xi Yang, Chengkun Wu
Mining a stroke knowledge graph from literature. BMC Bioinform. 22-S(10): 387 (2021) - [j13]Guo-Li Xiong
ADMETlab 2.0: an integrated online platform for accurate and comprehensive predictions of ADMET properties. Nucleic Acids Res. 49(Webserver-Issue): 5-14 (2021) - [c20]Chengkun Wu, Wei Wang, Xi Yang, Canqun Yang:
Drug-drug interaction extraction from biomedical texts based on multi-attention mechanism. ICBRA 2021: 49-55 - [c19]Kaifan Hu, Chengkun Wu, En Zhu:
Efficient Distributed Stochastic Gradient Descent Through Gaussian Averaging. ICAIS (1) 2021: 41-52 - [c18]Xurui Ma, Xiang Zhang, Chengkun Wu, Chuanfu Xu, Jie Liu, Zhigang Luo:
Joint motion context and clip augmentation for spatio-temporal action detection. ICMV 2021: 120840T - [c17]Dong Zhu, Chengkun Wu
AA-LSTM: An Adversarial Autoencoder Joint Model for Prediction of Equipment Remaining Useful Life. PAKDD (1) 2021: 290-301 - 2020
- [j12]Wei Wang, Xi Yang, Chengkun Wu
CGINet: graph convolutional network-based model for identifying chemical-gene interaction in an integrated multi-relational graph. BMC Bioinform. 21(1): 544 (2020)
2010 – 2019
- 2019
- [c16]Anyao Tang, Chengkun Wu
Parallel Computing for Large-Scale Author Name Disambiguation in MEDLINE. HPCC/SmartCity/DSS 2019: 1580-1586 - 2018
- [j11]Xi Yang, Zhuo Song, Chengkun Wu
Constructing a database for the relations between CNV and human genetic diseases via systematic text mining. BMC Bioinform. 19-S(19): 125-134 (2018) - [j10]Yuewei Ming
Distributed and asynchronous Stochastic Gradient Descent with variance reduction. Neurocomputing 281: 27-36 (2018) - [j9]Yingbo Cui
mSNP: A Massively Parallel Algorithm for Large-Scale SNP Detection. IEEE Trans. Parallel Distributed Syst. 29(11): 2557-2567 (2018) - [c15]Xiang Zhang, Guohua Dong, Yimo Du, Chengkun Wu, Zhigang Luo, Canqun Yang:
Collaborative Subspace Graph Hashing for Cross-modal Retrieval. ICMR 2018: 213-221 - 2017
- [j8]Wei Wang, Xi Yang, Canqun Yang, Xiaowei Guo, Xiang Zhang, Chengkun Wu:
Dependency-based long short term memory network for drug-drug interaction extraction. BMC Bioinform. 18(16): 99-109 (2017) - [j7]Yuting Xing, Gen Li, Zhenguo Wang, Bolun Feng, Zhuo Song, Chengkun Wu:
GTZ: a fast compression and cloud transmission tool optimized for FASTQ files. BMC Bioinform. 18(16): 233-242 (2017) - [j6]Shaoliang Peng
P-Hint-Hunt: a deep parallelized whole genome DNA methylation detection tool. BMC Genom. 18(S2) (2017) - [c14]Xi Yang, Jianbin Fang
High Performance Coordinate Descent Matrix Factorization for Recommender Systems. Conf. Computing Frontiers 2017: 117-126 - [c13]Erxue Min, Yawei Zhao, Jun Long, Chengkun Wu, Kuan Li, Jianping Yin:
SVRG with adaptive epoch size. IJCNN 2017: 2935-2942 - 2016
- [j5]Lili Zhao, Kuan Li, Mao Wang, Jianping Yin, En Zhu, Chengkun Wu
Automatic cytoplasm and nuclei segmentation for color cervical smear image using an efficient gap-search MRF. Comput. Biol. Medicine 71: 46-56 (2016) - [c12]Qing Liao, Naiyang Guan, Chengkun Wu, Qian Zhang
Predicting Unknown Interactions Between Known Drugs and Targets via Matrix Completion. PAKDD (1) 2016: 591-604 - 2015
- [j4]Ettore Murabito, Riccardo Colombo, Chengkun Wu, Malkhey Verma, Samrina Rehman
SupraBiology 2014: Promoting UK-China collaboration on Systems Biology and High Performance Computing. Quant. Biol. 3(1): 46-53 (2015) - [j3]Xiangke Liao, Shaoliang Peng
Neo-hetergeneous Programming and Parallelized Optimization of a Human Genome Re-sequencing Analysis Software Pipeline on TH-2 Supercomputer. Supercomput. Front. Innov. 2(1): 73-83 (2015) - [c11]Xin Liu, Shaoliang Peng
mAMBER: Accelerating Explicit Solvent Molecular Dynamic with Intel Xeon Phi Many-Integrated Core Coprocessors. CCGRID 2015: 729-732 - [c10]Haiqiang Wang, Shaoliang Peng
A Method to Accelerate GROMACS in Offload Mode on Tianhe-2 Supercomputer. CCGRID 2015: 781-784 - [c9]Shaoliang Peng
The Challenge of Scaling Genome Big Data Analysis Software on TH-2 Supercomputer. CCGRID 2015: 823-828 - [c8]Yingbo Cui, Xiangke Liao, Shaoliang Peng
Large-Scale Neo-Heterogeneous Programming and Optimization of SNP Detection on Tianhe-2. ISC 2015: 74-86 - [c7]Heng Wang, Shaoliang Peng
BWTCP: A Parallel Method for Constructing BWT in Large Collection of Genomic Reads. ISC 2015: 171-178 - 2014
- [j2]Mengyi Sun, Bingyu Yan
Meeting report on YBPW 2014 (the 3rd Young Bioinformatics PIs Workshop). Quant. Biol. 2(2): 80-84 (2014) - 2013
- [j1]Chengkun Wu, Jean-Marc Schwartz
PathNER: a tool for systematic identification of biological pathway mentions in the literature. BMC Syst. Biol. 7(S-3): S2 (2013) - 2011
- [c6]Yingjie Xia, Chengkun Wu, Qing-Jie Kong, Zhenyu Shan, Li Kuang:
A Parallel Fusion Method for Heterogeneous Multi-sensor Transportation Data. MDAI 2011: 31-42
2000 – 2009
- 2009
- [c5]Chengkun Wu, Jianping Yin, Zhiping Cai, En Zhu, Jieren Cheng:
A Hybrid Parallel Signature Matching Model for Network Security Applications Using SIMD GPU. APPT 2009: 191-204 - [c4]Jieren Cheng, Jianping Yin, Yun Liu, Zhiping Cai, Chengkun Wu:
Detecting Distributed Denial of Service Attack Based on Multi-feature Fusion. FGIT-SecTech 2009: 132-139 - [c3]Chengkun Wu, Jianping Yin, Zhiping Cai, En Zhu, Jieren Cheng:
An Efficient Pre-filtering Mechanism for Parallel Intrusion Detection Based on Many-Core GPU. FGIT-SecTech 2009: 298-305 - [c2]Jieren Cheng, Jianping Yin, Chengkun Wu, Boyun Zhang, Yun Liu:
DDoS Attack Detection Method Based on Linear Prediction Model. ICIC (1) 2009: 1004-1013 - [c1]Jieren Cheng, Jianping Yin, Yun Liu, Zhiping Cai, Chengkun Wu:
DDoS Attack Detection Using IP Address Feature Interaction. INCoS 2009: 113-118
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:17 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: