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David Weese
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2010 – 2019
- 2017
- [p2]David Weese, Enrico Siragusa:
Full-Text Indexes for High-Throughput Sequencing. Algorithms for Next-Generation Sequencing Data 2017: 41-75 - [p1]David Weese, Marcel H. Schulz
, Hugues Richard:
DNA-Seq Error Correction Based on Substring Indices. Algorithms for Next-Generation Sequencing Data 2017: 147-166 - 2015
- [c6]Stefan Canzar, Sandro Andreotti, David Weese, Knut Reinert
CIDANE: Comprehensive Isoform Discovery and Abundance Estimation. RECOMB 2015: 60-61 - 2014
- [j9]Marcel H. Schulz
Fiona: a parallel and automatic strategy for read error correction. Bioinform. 30(17): 356-363 (2014) - [j8]René Rahn, David Weese, Knut Reinert
Journaled string tree - a scalable data structure for analyzing thousands of similar genomes on your laptop. Bioinform. 30(24): 3499-3505 (2014) - 2013
- [b1]David Weese:
Indices and Applications in High-Throughput Sequencing. Free University of Berlin, 2013 - [c5]Enrico Siragusa, David Weese, Knut Reinert
Scalable string similarity search/join with approximate seeds and multiple backtracking. EDBT/ICDT Workshops 2013: 370-374 - 2012
- [j7]Anne-Katrin Emde, Marcel H. Schulz
Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS. Bioinform. 28(5): 619-627 (2012) - [j6]David Weese, Manuel Holtgrewe, Knut Reinert
RazerS 3: Faster, fully sensitive read mapping. Bioinform. 28(20): 2592-2599 (2012) - [i1]Enrico Siragusa, David Weese, Knut Reinert:
Fast and sensitive read mapping with approximate seeds and multiple backtracking. CoRR abs/1208.4238 (2012) - 2011
- [j5]Manuel Holtgrewe
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping. BMC Bioinform. 12: 210 (2011) - [j4]Birte Kehr, David Weese, Knut Reinert
STELLAR: fast and exact local alignments. BMC Bioinform. 12(S-9): S15 (2011) - 2010
- [j3]Anne-Katrin Emde, Marcel Grunert
MicroRazerS: rapid alignment of small RNA reads. Bioinform. 26(1): 123-124 (2010)
2000 – 2009
- 2009
- [j2]Tobias Rausch
A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads. Bioinform. 25(9): 1118-1124 (2009) - 2008
- [j1]Andreas Döring
SeqAn An efficient, generic C++ library for sequence analysis. BMC Bioinform. 9 (2008) - [c4]Tobias Rausch
Segment-based multiple sequence alignment. ECCB 2008: 187-192 - [c3]David Weese, Marcel H. Schulz
Efficient String Mining under Constraints Via the Deferred Frequency Index. ICDM 2008: 374-388 - [c2]Marcel H. Schulz
Fast and Adaptive Variable Order Markov Chain Construction. WABI 2008: 306-317 - 2000
- [c1]Sebastian von Klinski, Claus Derz, David Weese, Thomas Tolxdorff:
Model-based image processing using snakes and mutual information. Image Processing 2000
Coauthor Index
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