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Sergey Koren
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2020 – today
- 2020
- [j11]Chirag Jain, Arang Rhie, Haowen Zhang, Claudia Chu
, Brian Walenz, Sergey Koren
Weighted minimizer sampling improves long read mapping. Bioinform. 36(Supplement-1): i111-i118 (2020)
2010 – 2019
- 2019
- [j10]Nathan D. Olson
Metagenomic assembly through the lens of validation: recent advances in assessing and improving the quality of genomes assembled from metagenomes. Briefings Bioinform. 20(4): 1140-1150 (2019) - [j9]Alexander T. Dilthey
HLA*LA - HLA typing from linearly projected graph alignments. Bioinform. 35(21): 4394-4396 (2019) - [j8]Jay Ghurye
Integrating Hi-C links with assembly graphs for chromosome-scale assembly. PLoS Comput. Biol. 15(8) (2019) - 2018
- [j7]Chirag Jain, Sergey Koren
A fast adaptive algorithm for computing whole-genome homology maps. Bioinform. 34(17): i748-i756 (2018) - [j6]Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases. J. Comput. Biol. 25(7): 766-779 (2018) - 2017
- [c2]Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy:
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases. RECOMB 2017: 66-81 - 2014
- [j5]Sergey Koren
Automated ensemble assembly and validation of microbial genomes. BMC Bioinform. 15: 126 (2014) - 2013
- [c1]Christopher Michael Hill, Irina Astrovskaya, Howard Huang, Sergey Koren, Atif Memon, Todd J. Treangen, Mihai Pop
De novo likelihood-based measures for comparing metagenomic assemblies. BIBM 2013: 94-98 - 2012
- [b1]Sergey Koren:
Genome Assembly: Novel Applications by Harnessing Emerging Sequencing Technologies and Graph Algorithms. University of Maryland, College Park, MD, USA, 2012 - 2011
- [j4]Sergey Koren
Bambus 2: scaffolding metagenomes. Bioinform. 27(21): 2964-2971 (2011) - 2010
- [j3]Sergey Koren
An algorithm for automated closure during assembly. BMC Bioinform. 11: 457 (2010)
2000 – 2009
- 2009
- [j2]Tobias Rausch
A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads. Bioinform. 25(9): 1118-1124 (2009) - 2008
- [j1]Jason R. Miller
Aggressive assembly of pyrosequencing reads with mates. Bioinform. 24(24): 2818-2824 (2008)
Coauthor Index
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