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Chuyang Ye
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2020 – today
- 2024
- [j25]Evi M. C. Huijben
, Maarten L. Terpstra, Arthur Jr Galapon, Suraj Pai, Adrian Thummerer, Peter Koopmans, Manya Afonso, Maureen A. J. M. van Eijnatten, Oliver J. Gurney-Champion, Zeli Chen, Yiwen Zhang, Kaiyi Zheng, Chuanpu Li, Haowen Pang
Generating synthetic computed tomography for radiotherapy: SynthRAD2023 challenge report. Medical Image Anal. 97: 103276 (2024) - [j24]Chundan Xu
SiMix: A domain generalization method for cross-site brain MRI harmonization via site mixing. NeuroImage 299: 120812 (2024) - [j23]Yuxing Li
Deep learning enables accurate brain tissue microstructure analysis based on clinically feasible diffusion magnetic resonance imaging. NeuroImage 300: 120858 (2024) - [j22]Ning Jiang, Gongshu Wang, Chuyang Ye
Multi-Task Collaborative Pre-Training and Adaptive Token Selection: A Unified Framework for Brain Representation Learning. IEEE J. Biomed. Health Informatics 28(9): 5528-5539 (2024) - [c41]Lujun Gui, Chuyang Ye, Tianyi Yan:
CAVM: Conditional Autoregressive Vision Model for Contrast-Enhanced Brain Tumor MRI Synthesis. MICCAI (7) 2024: 161-170 - [c40]Xinru Zhang, Ni Ou, Berke Doga Basaran, Marco Visentin, Mengyun Qiao, Renyang Gu, Cheng Ouyang, Yaou Liu, Paul M. Matthews, Chuyang Ye, Wenjia Bai:
A Foundation Model for Brain Lesion Segmentation with Mixture of Modality Experts. MICCAI (12) 2024: 379-389 - [i21]Ruizhi Zhu, Xinru Zhang, Haowen Pang, Chundan Xu
Advancing Brain Tumor Inpainting with Generative Models. CoRR abs/2402.01509 (2024) - [i20]Xinru Zhang, Ni Ou, Berke Doga Basaran, Marco Visentin, Mengyun Qiao, Renyang Gu, Cheng Ouyang, Yaou Liu, Paul M. Matthews, Chuyang Ye, Wenjia Bai:
A Foundation Model for Brain Lesion Segmentation with Mixture of Modality Experts. CoRR abs/2405.10246 (2024) - [i19]Qinting Jiang, Chuyang Ye, Dongyan Wei, Yuan Xue, Jingyan Jiang, Zhi Wang:
Discover Your Neighbors: Advanced Stable Test-Time Adaptation in Dynamic World. CoRR abs/2406.05413 (2024) - [i18]Lujun Gui, Chuyang Ye, Tianyi Yan:
CAVM: Conditional Autoregressive Vision Model for Contrast-Enhanced Brain Tumor MRI Synthesis. CoRR abs/2406.16074 (2024) - [i17]Chuyang Ye, Dongyan Wei, Zhendong Liu, Yuanyi Pang, Yixi Lin, Jiarong Liao, Qinting Jiang, Xianghua Fu, Qing Li, Jingyan Jiang:
DATTA: Towards Diversity Adaptive Test-Time Adaptation in Dynamic Wild World. CoRR abs/2408.08056 (2024) - 2023
- [j21]Tianshu Zheng, Guohui Yan, Haotian Li, Weihao Zheng
A microstructure estimation Transformer inspired by sparse representation for diffusion MRI. Medical Image Anal. 86: 102788 (2023) - [j20]Wan Liu
One-shot segmentation of novel white matter tracts via extensive data augmentation and adaptive knowledge transfer. Medical Image Anal. 90: 102968 (2023) - [j19]Xinru Zhang
CarveMix: A simple data augmentation method for brain lesion segmentation. NeuroImage 271: 120041 (2023) - [c39]Chuyang Ye, Zhizi Liu, Sihan Dong, Xueying Shao, Hongyu Chen, Honghai Zhu, Liang Zhang:
Measurements of Complexity in Vehicle Dashboards: Revision and Validation of the Perceived Visual Complexity Scale. HCI (1) 2023: 327-335 - [c38]Ziqi Wen
Source-Free Domain Adaptation for Medical Image Segmentation via Selectively Updated Mean Teacher. IPMI 2023: 225-236 - [c37]Wan Liu
Better Generalization of White Matter Tract Segmentation to Arbitrary Datasets with Scaled Residual Bootstrap. IPMI 2023: 629-640 - [c36]Huazhang Wang
ECGGAN: A Framework for Effective and Interpretable Electrocardiogram Anomaly Detection. KDD 2023: 5071-5081 - [c35]Tianshu Zheng, Ruicheng Ba, Xiaoli Wang, Chuyang Ye, Dan Wu:
AUA-dE: An Adaptive Uncertainty Guided Attention for Diffusion MRI Models Estimation. MICCAI (8) 2023: 142-151 - [c34]Ziqi Wen, Chuyang Ye:
A Robust Mean Teacher Framework for Semi-Supervised Cell Detection in Histopathology Images. MIDL 2023: 643-652 - [i16]Zipei Zhao, Fengqian Pang, Yaou Liu, Zhiwen Liu, Chuyang Ye:
Positive-unlabeled learning for binary and multi-class cell detection in histopathology images with incomplete annotations. CoRR abs/2302.08050 (2023) - [i15]Wan Liu, Qi Lu, Zhizheng Zhuo, Yaou Liu, Chuyang Ye:
One-Shot Segmentation of Novel White Matter Tracts via Extensive Data Augmentation. CoRR abs/2303.06852 (2023) - [i14]Wan Liu, Yuqian Chen, Chuyang Ye, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
Fiber Tract Shape Measures Inform Prediction of Non-Imaging Phenotypes. CoRR abs/2303.09124 (2023) - [i13]Xinru Zhang, Ni Ou, Chenghao Liu, Zhizheng Zhuo, Yaou Liu, Chuyang Ye:
Unsupervised Brain Tumor Segmentation with Image-based Prompts. CoRR abs/2304.01472 (2023) - [i12]Wan Liu, Chuyang Ye:
Better Generalization of White Matter Tract Segmentation to Arbitrary Datasets with Scaled Residual Bootstrap. CoRR abs/2309.13980 (2023) - 2022
- [j18]Qi Lu
A transfer learning approach to few-shot segmentation of novel white matter tracts. Medical Image Anal. 79: 102454 (2022) - [j17]Wan Liu, Qi Lu, Zhizheng Zhuo, Yuxing Li, Yunyun Duan, Pinnan Yu, Liying Qu, Chuyang Ye, Yaou Liu:
Volumetric segmentation of white matter tracts with label embedding. NeuroImage 250: 118934 (2022) - [c33]Shiyu Lu
Semi-supervised Intracranial Aneurysm Segmentation with Selected Unlabeled Data. BrainLes@MICCAI 2022: 115-123 - [c32]Yijia Zeng, Wan Liu, Zhiwen Liu, Chuyang Ye:
Improved White Matter Tract Segmentation for Unannotated Dataset. CSSE 2022: 388-392 - [c31]Wan Liu, Qi Lu, Zhizheng Zhuo, Yaou Liu, Chuyang Ye:
One-Shot Segmentation of Novel White Matter Tracts via Extensive Data Augmentation. MICCAI (1) 2022: 133-142 - [c30]Chundan Xu
Improved Domain Generalization for Cell Detection in Histopathology Images via Test-Time Stain Augmentation. MICCAI (2) 2022: 150-159 - [c29]Tianshu Zheng, Weihao Zheng, Yi Sun, Yi Zhang, Chuyang Ye, Dan Wu:
An Adaptive Network with Extragradient for Diffusion MRI-Based Microstructure Estimation. MICCAI (1) 2022: 153-162 - [i11]Tianshu Zheng, Cong Sun, Weihao Zheng, Wen Shi, Haotian Li, Yi Sun, Yi Zhang, Guangbin Wang, Chuyang Ye, Dan Wu:
A microstructure estimation Transformer inspired by sparse representation for diffusion MRI. CoRR abs/2205.06450 (2022) - 2021
- [j16]Yanlin Liu, Wenhui Cui
Knowledge transfer between brain lesion segmentation tasks with increased model capacity. Comput. Medical Imaging Graph. 88: 101842 (2021) - [j15]Yu Qin, Zhiwen Liu, Chenghao Liu, Yuxing Li, Xiangzhu Zeng, Chuyang Ye
Super-Resolved q-Space deep learning with uncertainty quantification. Medical Image Anal. 67: 101885 (2021) - [j14]Yu Qin, Yuxing Li, Zhizheng Zhuo, Zhiwen Liu, Yaou Liu, Chuyang Ye
Multimodal super-resolved q-space deep learning. Medical Image Anal. 71: 102085 (2021) - [j13]Qi Lu, Yuxing Li, Chuyang Ye
Volumetric white matter tract segmentation with nested self-supervised learning using sequential pretext tasks. Medical Image Anal. 72: 102094 (2021) - [c28]Qi Lu
Knowledge Transfer for Few-Shot Segmentation of Novel White Matter Tracts. IPMI 2021: 216-227 - [c27]Chenghao Liu, Xiangzhu Zeng, Kongming Liang, Yizhou Yu, Chuyang Ye:
Improved Brain Lesion Segmentation with Anatomical Priors from Healthy Subjects. MICCAI (1) 2021: 186-195 - [c26]Xinru Zhang, Chenghao Liu, Ni Ou
CarveMix: A Simple Data Augmentation Method for Brain Lesion Segmentation. MICCAI (1) 2021: 196-205 - [c25]Zipei Zhao, Fengqian Pang, Zhiwen Liu, Chuyang Ye:
Positive-Unlabeled Learning for Cell Detection in Histopathology Images with Incomplete Annotations. MICCAI (8) 2021: 509-518 - [i10]Qi Lu, Chuyang Ye:
Knowledge Transfer for Few-shot Segmentation of Novel White Matter Tracts. CoRR abs/2105.14513 (2021) - [i9]Zipei Zhao, Fengqian Pang, Zhiwen Liu, Chuyang Ye:
Positive-unlabeled Learning for Cell Detection in Histopathology Images with Incomplete Annotations. CoRR abs/2106.15918 (2021) - [i8]Xinru Zhang
CarveMix: A Simple Data Augmentation Method for Brain Lesion Segmentation. CoRR abs/2108.06883 (2021) - 2020
- [j12]Bin He, Zhengyi Yang, Lingzhong Fan, Bin Gao, Hai Li, Chuyang Ye, Bo You, Tianzi Jiang:
MonkeyCBP: A Toolbox for Connectivity-Based Parcellation of Monkey Brain. Frontiers Neuroinformatics 14: 14 (2020) - [j11]Chuyang Ye
An improved deep network for tissue microstructure estimation with uncertainty quantification. Medical Image Anal. 61: 101650 (2020) - [c24]Yanlin Liu, Xiangzhu Zeng, Chuyang Ye:
Volume Preserving Brain Lesion Segmentation. BrainLes@MICCAI (1) 2020: 60-69 - [c23]Chenghao Liu, Fengqian Pang, Yanlin Liu, Kongming Liang, Xiuli Li, Xiangzhu Zeng, Chuyang Ye:
Semi-Supervised Brain Lesion Segmentation Using Training Images with and Without Lesions. ISBI 2020: 279-282 - [c22]Shen Wang, Kongming Liang, Chengwei Pan, Chuyang Ye, Xiuli Li, Feng Liu, Yizhou Yu, Yizhou Wang:
Segmentation-Based Method Combined with Dynamic Programming for Brain Midline Delineation. ISBI 2020: 772-776 - [c21]Yu Qin, Yuxing Li, Zhiwen Liu, Chuyang Ye:
Knowledge Transfer Between Datasets for Learning-Based Tissue Microstructure Estimation. ISBI 2020: 1530-1533 - [c20]Zi Lin, Manli Zhong, Xiangzhu Zeng, Chuyang Ye:
Frequency-Selective Learning for CT to MR Synthesis. SASHIMI@MICCAI 2020: 101-109 - [c19]Qi Lu, Yuxing Li, Chuyang Ye:
White Matter Tract Segmentation with Self-supervised Learning. MICCAI (7) 2020: 270-279 - [i7]Shen Wang, Kongming Liang, Chengwei Pan, Chuyang Ye, Xiuli Li, Feng Liu, Yizhou Yu, Yizhou Wang:
Segmentation-based Method combined with Dynamic Programming for Brain Midline Delineation. CoRR abs/2002.11918 (2020)
2010 – 2019
- 2019
- [j10]Chuyang Ye, Xiuli Li, Jingnan Chen:
A deep network for tissue microstructure estimation using modified LSTM units. Medical Image Anal. 55: 49-64 (2019) - [c18]Wenhui Cui, Yanlin Liu, Yuxing Li, Menghao Guo, Yiming Li, Xiuli Li, Tianle Wang, Xiangzhu Zeng, Chuyang Ye:
Semi-supervised Brain Lesion Segmentation with an Adapted Mean Teacher Model. IPMI 2019: 554-565 - [c17]Chuyang Ye, Yu Qin, Chenghao Liu, Yuxing Li, Xiangzhu Zeng, Zhiwen Liu:
Super-Resolved q-Space Deep Learning. MICCAI (3) 2019: 582-589 - [i6]Wenhui Cui, Yanlin Liu, Yuxing Li, Menghao Guo, Yiming Li, Xiuli Li, Tianle Wang, Xiangzhu Zeng, Chuyang Ye:
Semi-Supervised Brain Lesion Segmentation with an Adapted Mean Teacher Model. CoRR abs/1903.01248 (2019) - [i5]Yu Qin, Yuxing Li, Zhiwen Liu, Chuyang Ye:
Knowledge Transfer between Datasets for Learning-based Tissue Microstructure Estimation. CoRR abs/1910.10930 (2019) - 2018
- [j9]Chuyang Ye, Jerry L. Prince:
Dictionary-based fiber orientation estimation with improved spatial consistency. Medical Image Anal. 44: 41-53 (2018) - 2017
- [j8]Chuyang Ye
Probabilistic tractography using Lasso bootstrap. Medical Image Anal. 35: 544-553 (2017) - [j7]Chuyang Ye:
Tissue microstructure estimation using a deep network inspired by a dictionary-based framework. Medical Image Anal. 42: 288-299 (2017) - [c16]Chuyang Ye:
Estimation of Tissue Microstructure Using a Deep Network Inspired by a Sparse Reconstruction Framework. IPMI 2017: 466-477 - [c15]Chuyang Ye, Jerry L. Prince:
Fiber Orientation Estimation Guided by a Deep Network. MICCAI (1) 2017: 575-583 - [c14]Chuyang Ye:
Learning-Based Ensemble Average Propagator Estimation. MICCAI (1) 2017: 593-601 - [i4]Chuyang Ye:
Estimation of Tissue Microstructure Using a Deep Network Inspired by a Sparse Reconstruction Framework. CoRR abs/1704.01246 (2017) - [i3]Chuyang Ye, Jerry L. Prince:
Fiber Orientation Estimation Guided by a Deep Network. CoRR abs/1705.06870 (2017) - [i2]Chuyang Ye:
Learning-based Ensemble Average Propagator Estimation. CoRR abs/1706.06258 (2017) - 2016
- [j6]Chuyang Ye, Jerry L. Prince:
A Bayesian approach to fiber orientation estimation guided by volumetric tract segmentation. Comput. Medical Imaging Graph. 54: 35-47 (2016) - [j5]Chuyang Ye
Estimation of fiber orientations using neighborhood information. Medical Image Anal. 32: 243-256 (2016) - [j4]Zhen Yang, Chuyang Ye, John A. Bogovic, Aaron Carass
Automated cerebellar lobule segmentation with application to cerebellar structural analysis in cerebellar disease. NeuroImage 127: 435-444 (2016) - [c13]Chuyang Ye:
Fiber Orientation Estimation Using Nonlocal and Local Information. MICCAI (1) 2016: 97-105 - [c12]Ke Li, Chuyang Ye, Zhen Yang, Aaron Carass
Quality assurance using outlier detection on an automatic segmentation method for the cerebellar peduncles. Medical Imaging: Image Processing 2016: 97841H - [i1]Chuyang Ye, Jiachen Zhuo, Rao P. Gullapalli, Jerry L. Prince:
Estimation of Fiber Orientations Using Neighborhood Information. CoRR abs/1601.04115 (2016) - 2015
- [j3]Chuyang Ye
A Bayesian approach to distinguishing interdigitated tongue muscles from limited diffusion magnetic resonance imaging. Comput. Medical Imaging Graph. 45: 63-74 (2015) - [j2]Chuyang Ye, Zhen Yang, Sarah H. Ying, Jerry L. Prince:
Segmentation of the Cerebellar Peduncles Using a Random Forest Classifier and a Multi-object Geometric Deformable Model: Application to Spinocerebellar Ataxia Type 6. Neuroinformatics 13(3): 367-381 (2015) - [c11]Chuyang Ye, Jeffrey Glaister, Jerry L. Prince:
Probabilistic fiber tracking using a modified Lasso bootstrap method. ISBI 2015: 943-946 - [c10]Fangxu Xing
Relating speech production to tongue muscle compressions using tagged and high-resolution magnetic resonance imaging. Medical Imaging: Image Processing 2015: 94131L - 2014
- [c9]Chuyang Ye, Aaron Carass, Emi Z. Murano, Maureen L. Stone, Jerry L. Prince:
A Bayesian Approach to Distinguishing Interdigitated Muscles in the Tongue from Limited Diffusion Weighted Imaging. BAMBI 2014: 13-24 - [c8]Chuyang Ye, Vivek Vaidya, Fei Zhao:
Improved mass detection in 3D automated breast ultrasound using region based features and multi-view information. EMBC 2014: 2865-2868 - [c7]Joshua V. Stough, Jeffrey Glaister, Chuyang Ye, Sarah H. Ying, Jerry L. Prince, Aaron Carass
Automatic Method for Thalamus Parcellation Using Multi-modal Feature Classification. MICCAI (3) 2014: 169-176 - 2013
- [c6]Chuyang Ye, John A. Bogovic, Sarah H. Ying, Jerry L. Prince:
Segmentation of the complete superior cerebellar peduncles using a multi-object geometric deformable model. ISBI 2013: 49-52 - [c5]Joshua V. Stough, Chuyang Ye, Sarah H. Ying, Jerry L. Prince:
Thalamic parcellation from multi-modal data using random forest learning. ISBI 2013: 852-855 - [c4]Chuyang Ye, John A. Bogovic, Sarah H. Ying, Jerry L. Prince:
Parcellation of the thalamus using diffusion tensor images and a multi-object geometric deformable model. Medical Imaging: Image Processing 2013: 866909 - 2012
- [c3]Chuyang Ye, John A. Bogovic, Pierre-Louis Bazin
Fully automatic segmentation of the dentate nucleus using diffusion weighted images. ISBI 2012: 1128-1131 - [c2]Chuyang Ye, Pierre-Louis Bazin
Labeling of the cerebellar peduncles using a supervised Gaussian classifier with volumetric tract segmentation. Medical Imaging: Image Processing 2012: 831447 - [c1]Chuyang Ye, Pierre-Louis Bazin
A fiber tracking method guided by volumetric tract segmentation. MMBIA 2012: 137-142 - 2011
- [j1]Pierre-Louis Bazin
Direct segmentation of the major white matter tracts in diffusion tensor images. NeuroImage 58(2): 458-468 (2011)
Coauthor Index
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