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Florian Markowetz
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2020 – today
- 2021
- [j21]Edith M. Ross
, Kerstin Haase, Peter Van Loo, Florian Markowetz
Allele-specific multi-sample copy number segmentation in ASCAT. Bioinform. 37(13): 1909-1911 (2021) - [c4]Paula Martin-Gonzalez, Mireia Crispin-Ortuzar, Florian Markowetz:
Predictive Modelling of Highly Multiplexed Tumour Tissue Images by Graph Neural Networks. iMIMIC/TDA4MedicalData@MICCAI 2021: 98-107 - 2020
- [j20]Leonardo Rundo
Tissue-specific and interpretable sub-segmentation of whole tumour burden on CT images by unsupervised fuzzy clustering. Comput. Biol. Medicine 120: 103751 (2020) - [j19]Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj, Julian M. Hess, Randi Istrup Juul, Ziao Lin, Lars Feuerbach, Radhakrishnan Sabarinathan, Tobias Madsen, Jaegil Kim, Loris Mularoni, Shimin Shuai, Andrés Lanzós, Carl Herrmann
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nat. 578(7793): 102-111 (2020) - [j18]Moritz Gerstung
The evolutionary history of 2,658 cancers. Nat. 578(7793): 122-128 (2020)
2010 – 2019
- 2019
- [j17]Sayed-Rzgar Hosseini
Estimating the predictability of cancer evolution. Bioinform. 35(14): i389-i397 (2019) - 2017
- [j16]Martin Pirkl
Inferring modulators of genetic interactions with epistatic nested effects models. PLoS Comput. Biol. 13(4) (2017) - 2015
- [j15]Florian Markowetz
You Are Not Working for Me; I Am Working with You. PLoS Comput. Biol. 11(9) (2015) - 2014
- [j14]Roland F. Schwarz
Phylogenetic Quantification of Intra-tumour Heterogeneity. PLoS Comput. Biol. 10(4) (2014) - [j13]Alex J. Cornish
SANTA: Quantifying the Functional Content of Molecular Networks. PLoS Comput. Biol. 10(9) (2014) - 2012
- [j12]Xin Wang
Posterior Association Networks and Functional Modules Inferred from Rich Phenotypes of Gene Perturbations. PLoS Comput. Biol. 8(6) (2012) - [j11]Yinyin Yuan
A Sparse Regulatory Network of Copy-Number Driven Gene Expression Reveals Putative Breast Cancer Oncogenes. IEEE ACM Trans. Comput. Biol. Bioinform. 9(4): 947-954 (2012) - 2011
- [j10]Xin Wang
HTSanalyzeR: an R/Bioconductor package for integrated network analysis of high-throughput screens. Bioinform. 27(6): 879-880 (2011) - [j9]Yinyin Yuan
Penalized regression elucidates aberration hotspots mediating subtype-specific transcriptional responses in breast cancer. Bioinform. 27(19): 2679-2685 (2011) - [j8]Ewa Szczurek
Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation data. BMC Bioinform. 12: 249 (2011) - [j7]Gokmen Altay, Mohammad Asim, Florian Markowetz
Differential C3NET reveals disease networks of direct physical interactions. BMC Bioinform. 12: 296 (2011) - [j6]Yinyin Yuan
Patient-Specific Data Fusion Defines Prognostic Cancer Subtypes. PLoS Comput. Biol. 7(10) (2011) - 2010
- [j5]Florian Markowetz
How to Understand the Cell by Breaking It: Network Analysis of Gene Perturbation Screens. PLoS Comput. Biol. 6(2) (2010) - [j4]Florian Markowetz
Mapping Dynamic Histone Acetylation Patterns to Gene Expression in Nanog-Depleted Murine Embryonic Stem Cells. PLoS Comput. Biol. 6(12) (2010) - [c3]Yinyin Yuan, Christina Curtis
A sparse regulatory network of copy-number driven expression reveals putative breast cancer oncogenes. BIBM 2010: 473-478
2000 – 2009
- 2008
- [j3]Holger Fröhlich
Analyzing gene perturbation screens with nested effects models in R and bioconductor. Bioinform. 24(21): 2549-2550 (2008) - 2007
- [j2]Florian Markowetz
Inferring cellular networks - a review. BMC Bioinform. 8(S-6) (2007) - [c2]Florian Markowetz, Dennis Kostka, Olga G. Troyanskaya
Nested effects models for high-dimensional phenotyping screens. ISMB/ECCB (Supplement of Bioinformatics) 2007: 305-312 - 2006
- [b1]Florian Markowetz:
Probabilistic Models for Gene Silencing Data (Probabilistische Modelle für RNA-Interferenz-Daten). FU Berlin, Germany, 2006 - 2005
- [j1]Florian Markowetz, Jacques Bloch
Non-transcriptional pathway features reconstructed from secondary effects of RNA interference. Bioinform. 21(21): 4026-4032 (2005) - [c1]Florian Markowetz, Steffen Grossmann, Rainer Spang:
Probabilistic Soft Interventions in Conditional Gaussian Networks. AISTATS 2005: 214-221
Coauthor Index
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