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Computers in Biology and Medicine, Volume 171
Volume 171, 2024
- Chenyu Zhang, Jiaxin Liu, Lisong Bian, Sishi Xiang, Jun Liu, Wenxue Guan
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FMB: Dual-view fusion and registration of 2D DSA images and 3D MRA images for neurointerventional-based procedures. 107987 - Jieming Zhang
BCSwinReg: A cross-modal attention network for CBCT-to-CT multimodal image registration. 107990 - Wang Zhang
ETUNet:Exploring efficient transformer enhanced UNet for 3D brain tumor segmentation. 108005 - Dario Bertazioli, Marco Piazza
An integrated computational pipeline for machine learning-driven diagnosis based on Raman spectra of saliva samples. 108028 - Lea Christierson
Validation of fluid-structure interaction simulations of the opening phase of phantom mitral heart valves under physiologically inspired conditions. 108033 - Cheng Cao, Hao Wang, Jin-Rong Yang, Qiang Chen, Ya-Min Guo, Jian-Zhong Chen
MCPNET: Development of an interpretable deep learning model based on multiple conformations of the compound for predicting developmental toxicity. 108037 - Jie Xing, Chengye Li, Peiliang Wu, Xueding Cai, Jinsheng Ouyang:
Optimized fuzzy K-nearest neighbor approach for accurate lung cancer prediction based on radial endobronchial ultrasonography. 108038 - Ricardo M. Rosales
Experimentally-guided in silico design of engineered heart tissues to improve cardiac electrical function after myocardial infarction. 108044 - Peilun Song
Identifying frequency-dependent imaging genetic associations via hypergraph-structured multi-task sparse canonical correlation analysis. 108051 - Na Li, Jinjie Xiao
Joint learning of multi-level dynamic brain networks for autism spectrum disorder diagnosis. 108054 - Shizheng Qiu, Yige Sun, Jiahe Guo
Genome-wide analysis reveals extensive genetic overlap between childhood phenotypes and later-life type 2 diabetes. 108065 - Naima Vahab, Tarun Bonu, Levin Kuhlmann
Uncovering co-regulatory modules and gene regulatory networks in the heart through machine learning-based analysis of large-scale epigenomic data. 108068 - Jingyu Liu
Effective hyper-connectivity network construction and learning: Application to major depressive disorder identification. 108069 - Pengfei Liu
GIT-Mol: A multi-modal large language model for molecular science with graph, image, and text. 108073 - Shijie Sun, Kai Wang, Deyu Guo, Haotian Zheng, Yong Liu, Hongchang Shen, Jiajun Du
Identification of the key DNA damage response genes for predicting immunotherapy and chemotherapy efficacy in lung adenocarcinoma based on bulk, single-cell RNA sequencing, and spatial transcriptomics. 108078 - Qiaoli Zhou
RIHANet: A Residual-based Inception with Hybrid-Attention Network for Seizure Detection using EEG signals. 108086 - Jian Wang
Thyroid ultrasound diagnosis improvement via multi-view self-supervised learning and two-stage pre-training. 108087 - Xiaoxuan Liu, James Reigle
Artificial intelligence image-based prediction models in IBD exhibit high risk of bias: A systematic review. 108093 - Cemile Bagkur
A fractional-order model for nosocomial infection caused by Pseudomonas aeruginosa in Northern Cyprus. 108094 - Zhengyang Lan
Towards a diagnostic tool for neurological gait disorders in childhood combining 3D gait kinematics and deep learning. 108095 - Frank C. Bennis
The added value of temporal data and the best way to handle it: A use-case for atrial fibrillation using general practitioner data. 108097 - Anas Bilal
NIMEQ-SACNet: A novel self-attention precision medicine model for vision-threatening diabetic retinopathy using image data. 108099 - Yiyang Zhao, Kangla Liao, Yineng Zheng, Xiaoli Zhou, Xingming Guo
Boundary attention with multi-task consistency constraints for semi-supervised 2D echocardiography segmentation. 108100 - Michele Boldo
On the reliability of single-camera markerless systems for overground gait monitoring. 108101 - Jianran Ren, Jingyi Che, Peicong Gong, Xiaojun Wang, Xiangning Li, Anan Li
Cross comparison representation learning for semi-supervised segmentation of cellular nuclei in immunofluorescence staining. 108102 - Shiyao Sun, Chong Fu
GLFNet: Global-local fusion network for the segmentation in ultrasound images. 108103 - Jinhang Wei
Enhancing drug-food interaction prediction with precision representations through multilevel self-supervised learning. 108104 - Angelina Thomas Villikudathil
Exploring metformin monotherapy response in Type-2 diabetes: Computational insights through clinical, genomic, and proteomic markers using machine learning algorithms. 108106 - Yixin Liu
Computational identification of DNA damage-relevant lncRNAs for predicting therapeutic efficacy and clinical outcomes in cancer. 108107 - Tao Wang
postGWAS: A web server for deciphering the causality post the genome-wide association studies. 108108 - Chaokai Zhang, Lara M. Bartels
A computational pipeline towards large-scale and multiscale modeling of traumatic axonal injury. 108109 - Lihong Peng
Identifying potential ligand-receptor interactions based on gradient boosted neural network and interpretable boosting machine for intercellular communication analysis. 108110 - Ran Zhou
JoCoRank: Joint correlation learning with ranking similarity regularization for imbalanced fetal brain age regression. 108111 - Ju Zhang, Weiwei Gong, Lieli Ye, Fanghong Wang, Zhibo Shangguan, Yun Cheng:
A Review of deep learning methods for denoising of medical low-dose CT images. 108112 - Mengsha Tong, Shijie Luo
SIMarker: Cellular similarity detection and its application to diagnosis and prognosis of liver cancer. 108113 - Isha Arora
mtx-COBRA: Subcellular localization prediction for bacterial proteins. 108114 - Yao Lin, Jiazheng Wang
CFANet: Context fusing attentional network for preoperative CT image segmentation in robotic surgery. 108115 - Uttam Khatri
Diagnosis of Alzheimer's disease via optimized lightweight convolution-attention and structural MRI. 108116 - Ribot Fleury T. Ceskoutsé
Sub-clustering based recommendation system for stroke patient: Identification of a specific drug class for a given patient. 108117 - Xin Liu
GrMoNAS: A granularity-based multi-objective NAS framework for efficient medical diagnosis. 108118 - Michele Marro
A numerical model for quantifying exposure to natural and artificial light in human health research. 108119 - Shuchao Chen
LD-UNet: A long-distance perceptual model for segmentation of blurred boundaries in medical images. 108120 - Junde Chen, Yuxin Wen
Multi-modal learning for inpatient length of stay prediction. 108121 - Eric V. Strobl, Thomas A. Lasko
Mitigating pathogenesis for target discovery and disease subtyping. 108122 - Emily Louise Manchester
Aortic valve neocuspidization and bioprosthetic valves: Evaluating turbulence haemodynamics. 108123 - Lucas Salgado Rezende de Mendonça
Evidence for the druggability of aldosterone targets in heart failure: A bioinformatics and data science-driven decision-making approach. 108124 - Qi Miao, Xuechun Wang, Jingjing Cui, Haoxin Zheng, Yan Xie, Kexin Zhu, Ruimei Chai, Yuanxi Jiang, Dongli Feng, Xin Zhang, Feng Shi, Xiaodong Tan, Guoguang Fan, Keke Liang:
Artificial intelligence to predict T4 stage of pancreatic ductal adenocarcinoma using CT imaging. 108125 - Joel Nyholm
Prediction of dementia based on older adults' sleep disturbances using machine learning. 108126 - Zhuo Huang, Qiu Xiao, Tuo Xiong, Wanwan Shi
Predicting Drug-Protein Interactions through Branch-Chain Mining and multi-dimensional attention network. 108127 - Xin Tian
Enhanced in-stent luminal visualization and restenosis diagnosis in coronary computed tomography angiography via coronary stent decomposition algorithm from dual-energy image. 108128 - Zheyu Zhou, Cuilin Xiao, Jinfen Yin, Jiayi She, Hao Duan, Chunling Liu, Xiuhao Fu, Feifei Cui, Qi Qi, Zilong Zhang
PSAC-6mA: 6mA site identifier using self-attention capsule network based on sequence-positioning. 108129 - Camille Franchet
Bias reduction using combined stain normalization and augmentation for AI-based classification of histological images. 108130 - Jinsha Chen
SFE-Net: Spatial-Frequency Enhancement Network for robust nuclei segmentation in histopathology images. 108131 - Jiayi Xie, Hongfeng Li
Quantitative analysis of molecular transport in the extracellular space using physics-informed neural network. 108133 - Avishka Wickramarachchi
Flow characterization of Maquet and Bio-Medicus multi-stage drainage cannulae during venoarterial extracorporeal membrane oxygenation. 108135 - Yige Sun, Jirui Guo, Yang Liu, Nan Wang, Yanwei Xu, Fei Wu, Jianxin Xiao, Yingpu Li, Xinxin Wang, Yang Hu, Yang Zhou:
METnet: A novel deep learning model predicting MET dysregulation in non-small-cell lung cancer on computed tomography images. 108136 - Van Manh
An efficient framework for lesion segmentation in ultrasound images using global adversarial learning and region-invariant loss. 108137 - Sebastiaan Lootens
Directed Graph Mapping exceeds Phase Mapping for the detection of simulated 2D meandering rotors in fibrotic tissue with added noise. 108138 - Viktor Wase, Sophie Wuyckens
The proton arc therapy treatment planning problem is NP-Hard. 108139 - Claire L. Walsh
Reconstructing microvascular network skeletons from 3D images: What is the ground truth? 108140 - Yilin Yang, Boram Gu, Xiao Yun Xu
In silico study of combination thrombolytic therapy with alteplase and mutant pro-urokinase for fibrinolysis in ischemic stroke. 108141 - Siyi Wei, Jinhui Zhang
Design and hierarchical analysis of magnetic actuated robot: A governing equation based approach. 108142 - Jing Fang
SeqCorr-EUNet: A sequence correction dual-flow network for segmentation and quantification of anterior segment OCT image. 108143 - Xiaoying Pan, Yaya Mu, Chenyang Ma, Qiqi He:
TFCNet: A texture-aware and fine-grained feature compensated polyp detection network. 108144 - Zhengwei Ou
PNMC: Four-dimensional conebeam CT reconstruction combining prior network and motion compensation. 108145 - Xiaona Yang, Bo Ding, Jian Qin, Luyao Guo, Jing Zhao, Yongjun He
HVS-Unsup: Unsupervised cervical cell instance segmentation method based on human visual simulation. 108147 - Xinlei Wang
Graph kernel of brain networks considering functional similarity measures. 108148 - Mengke Huo, Siyuan He
Mechano-driven intervertebral bone bridging via oriented mechanical stimulus in a twist metamaterial cage: An in silico study. 108149 - Fei Jiang
Multi-scale simulations of pulmonary airflow based on a coupled 3D-1D-0D model. 108150 - Hongbi Li
Multi-level feature extraction and reconstruction for 3D MRI image super-resolution. 108151 - Ming Fang, Minghan Fu
Deep integrated fusion of local and global features for cervical cell classification. 108153 - Muhammad Ibrahim
An ensemble machine learning approach for the detection of unannounced meals to enhance postprandial glucose control. 108154 - Qingfeng Tang, Shiping Liu, Chao Tao, Jue Wang, Huanhuan Zhao, Guangjun Wang, Xu Zhao, Qun Ren, Liangliang Zhang, Benyue Su
A new method for vascular age estimation based on relative risk difference in vascular aging. 108155 - Ana Isabel Avilés-Alía
The Discovery of inhibitors of the SARS-CoV-2 S protein through computational drug repurposing. 108163 - Kadabagere Narayanaswamy Hemavathi
Computational screening of potential anti-inflammatory leads from Jeevaneeya Rasayana plants targeting COX-2 and 5- LOX by molecular docking and dynamic simulation approaches. 108164 - Tao Shen
Deep reinforcement learning enables better bias control in benchmark for virtual screening. 108165 - Zhaomin Yao, Fei Li, Weiming Xie, Jiaming Chen, Jiezhang Wu, Ying Zhan, Xiaodan Wu, Zhiguo Wang
DeepSF-4mC: A deep learning model for predicting DNA cytosine 4mC methylation sites leveraging sequence features. 108166 - Abdulrahman Alkojak Almansi, Sima Sugarova, Abdulrahman Alsanosi, Fida Almuhawas, Louis Hofmeyr, Franca Wagner, Emerencia Kedves, Kiran K. Sriperumbudur, Anandhan Dhanasingh, Andras Kedves:
A novel radiological software prototype for automatically detecting the inner ear and classifying normal from malformed anatomy. 108168 - Xinran Cui
Long-read sequencing unveils novel somatic variants and methylation patterns in the genetic information system of early lung cancer. 108174 - Hehe Wu, Xiaojian Liu, Yi Fang, Yang Yang, Yan Huang, Xiaoyong Pan
Decoding protein binding landscape on circular RNAs with base-resolution transformer models. 108175 - Wentao Li
Semi-supervised segmentation of orbit in CT images with paired copy-paste strategy. 108176 - Shu-Hao Wang
RFEM: A framework for essential microRNA identification in mice based on rotation forest and multiple feature fusion. 108177 - Nouman Javed
Flight traits of dengue-infected Aedes aegypti mosquitoes. 108178 - Min Yan, Ruixin Wu, Han Fu, Chao Hu, Yanan Hao, Jie Zeng, Tong Chen, Yingming Wang, Yingying Wang, Jing Hu
Integrated analysis of single-cell and bulk RNA sequencing data reveals the association between hypoxic tumor cells and exhausted T cells in predicting immune therapy response. 108179 - Dong Huang, Xiucai Ye
Multi-party collaborative drug discovery via federated learning. 108181 - Lixin Ren
SpecLoop predicts cell type-specific chromatin loop via transcription factor cooperation. 108182 - Bo Hao, Huixing Dong, Rui Xiong, Congkuan Song, Chenzhen Xu, Ning Li, Qing Geng
Identification of SLC2A1 as a predictive biomarker for survival and response to immunotherapy in lung squamous cell carcinoma. 108183 - Yanlin He, Yugen Yi
BGF-Net: Boundary guided filter network for medical image segmentation. 108184 - Yunxiao Ren
Predicting hosts and cross-species transmission of Streptococcus agalactiae by interpretable machine learning. 108185 - Huafeng Wang
Unveiling camouflaged and partially occluded colorectal polyps: Introducing CPSNet for accurate colon polyp segmentation. 108186 - Hongli Lai, Mengyuan Lyu, Hongxia Ruan
Large-scale analysis reveals splicing biomarkers for tuberculosis progression and prognosis. 108187 - Israt Jahan, Md. Tahmid Rahman Laskar, Chun Peng
A comprehensive evaluation of large Language models on benchmark biomedical text processing tasks. 108189 - Abdelkrim Semmad, Mohammed Bahoura
Comparative study of respiratory sounds classification methods based on cepstral analysis and artificial neural networks. 108190 - Jevgeni Jevsikov
Automated mitral inflow Doppler peak velocity measurement using deep learning. 108192 - Daniele Spoladore
A Knowledge-based Decision Support System for recommending safe recipes to individuals with dysphagia. 108193 - Maria Eleonora Minissi
Biosignal comparison for autism assessment using machine learning models and virtual reality. 108194 - Han Gong, Zhaolong Liu, Chunhui Yuan
Identification of cuproptosis-related lncRNAs with the significance in prognosis and immunotherapy of oral squamous cell carcinoma. 108198 - Fatima Saad
Deformable 3D/3D CT-to-digital-tomosynthesis image registration in image-guided bronchoscopy interventions. 108199 - Qiuhan Xu, Sisi Jiang, Ruiqing Kang, Yiling Wang, Baorong Zhang, Jun Tian:
Deciphering the molecular pathways underlying dopaminergic neuronal damage in Parkinson's disease associated with SARS-CoV-2 infection. 108200 - Hai Tang, Xin Luo
Lysosome-related biomarkers in preeclampsia and cancers: Machine learning and bioinformatics analysis. 108201 - Zhi Wang
CRMEFNet: A coupled refinement, multiscale exploration and fusion network for medical image segmentation. 108202 - Boon Peng Yap
Coarse-to-fine visual representation learning for medical images via class activation maps. 108203 - Elisabeth R. M. Heremans
U-PASS: An uncertainty-guided deep learning pipeline for automated sleep staging. 108205 - Ningqi Wang, Yarong Li, Shuwen Han, Yaozhong Zhang, Jun Yang, Zheng Yin, Cong Deng, Zijing Liu, Yinhang Wu, Wei Wu, Wei Xue, Tianjie Yang, Yangchun Xu, Qirong Shen, Gaofei Jiang, Zhong Wei:
CFViSA: A comprehensive and free platform for visualization and statistics in omics-data. 108206 - Weimin Wen, Hongyi Zhang
Enhanced multi-label cardiology diagnosis with channel-wise recurrent fusion. 108210 - Hongsong Feng, Sean Cottrell, Yuta Hozumi
Multiscale differential geometry learning of networks with applications to single-cell RNA sequencing data. 108211 - Zijia Liu, Jing Han, Jiannan Liu, Zhicheng Li
Neighborhood evaluator for efficient super-resolution reconstruction of 2D medical images. 108212 - Xun Deng
Analysis and design of antithetic proportional-integral-derivative biocontrol-systems with species dilution. 108213 - Teng Lu, Zhongwei Sun, Huanhuan Xia, Jie Qing, Abdul Rashad
Comparing the osteogenesis outcomes of different lumbar interbody fusions (A/O/X/T/PLIF) by evaluating their mechano-driven fusion processes. 108215 - Nuno M. Rodrigues
Analysis of domain shift in whole prostate gland, zonal and lesions segmentation and detection, using multicentric retrospective data. 108216 - Dechao Tang
ECPC-IDS: A benchmark endometrial cancer PET/CT image dataset for evaluation of semantic segmentation and detection of hypermetabolic regions. 108217 - Debao Guan
Using LDDMM and a kinematic cardiac growth model to quantify growth and remodelling in rat hearts under PAH. 108218 - Wen-Yuan Zhang
Critical roles of S100A12, MMP9, and PRTN3 in sepsis diagnosis: Insights from multiple microarray data analyses. 108222 - Sida Hao
Development of a prognostic model for muscle-invasive bladder cancer using glutamine metabolism. 108223 - Lejun Gong, Xiong Cui, Yang Liu, Cai Lin, Zhihong Gao:
SinCWIm: An imputation method for single-cell RNA sequence dropouts using weighted alternating least squares. 108225 - Huihui Zhou
Unsupervised domain adaptation for histopathology image segmentation with incomplete labels. 108226 - Zhuo Kuang
Weakly supervised learning for multi-class medical image segmentation via feature decomposition. 108228 - Hong Ju, Yanyan Cui, Qiaosen Su, Liran Juan, Balachandran Manavalan
CODENET: A deep learning model for COVID-19 detection. 108229 - Meiqin Gong, Yun Yu, Zixuan Wang, Junming Zhang, Xiongyi Wang, Cheng Fu, Yongqing Zhang
scAuto as a comprehensive framework for single-cell chromatin accessibility data analysis. 108230 - Jari Claes
The influence of resolution on the predictive power of spatial heterogeneity measures as biomarkers of liver fibrosis. 108231 - Golnaz Taheri, Mahnaz Habibi
Uncovering driver genes in breast cancer through an innovative machine learning mutational analysis method. 108234 - Yingdi Zhang
LumVertCancNet: A novel 3D lumbar vertebral body cancellous bone location and segmentation method based on hybrid Swin-transformer. 108237 - Yichi Zhang
Segment anything model for medical image segmentation: Current applications and future directions. 108238
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