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Pattern Discovery in Biomolecular Data, 1999

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Jason Tsong-Li Wang, Bruce A. Shapiro, Dennis E. Shasha:
Pattern Discovery in Biomolecular Data: Tools, Techniques and Applications. Oxford University Press 1999, ISBN 0-19-511940-1

Part I: Finding Patterns in Sequences

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Aleksandar Milosavljevic:
Discovering Patterns in DNA Sequences by the Algorithmic Significance Method. Pattern Discovery in Biomolecular Data 1999: 3-23
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Jorja G. Henikoff:
Assembling Blocks. Pattern Discovery in Biomolecular Data 1999: 24-29
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Timothy L. Bailey, Michael E. Baker, Charles Elkan, William Noble Grundy:
MEME, MAST, and Meta-MEME: New Tools for Motif Discovery in Protein Sequences. Pattern Discovery in Biomolecular Data 1999: 30-54
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Jason Tsong-Li Wang, Thomas G. Marr, Steve Rozen, Dennis E. Shasha:
Pattern Discovery and Classification in Biosequences. Pattern Discovery in Biomolecular Data 1999: 55-74

Part II: Finding Patterns in 3D Structures

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Janice I. Glasgow, Evan W. Steeg, Suzanne Fortier:
Motif Discovery in Protein Structure Databases. Pattern Discovery in Biomolecular Data 1999: 77-96
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Kentaro Tomii, Minoru Kanehisa:
Systematic Detection of Protein Structural Motifs. Pattern Discovery in Biomolecular Data 1999: 97-110
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Isidore Rigoutsos, Daniel E. Platt, Andrea Califano, B. David Silverman:
Representation and Matching of Small Flexible Molecules in Large Databases of 3D Molecular Information. Pattern Discovery in Biomolecular Data 1999: 111-129

Part III: System Components for Discovery

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Bin Li, Dennis E. Shasha, Jason Tsong-Li Wang:
A Framework for Biological Pattern Discovery on Networks of Workstations. Pattern Discovery in Biomolecular Data 1999: 133-144
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Diane J. Cook, Lawrence B. Holder, Gehad Galal:
Discovering Concepts in Structural Data. Pattern Discovery in Biomolecular Data 1999: 145-159
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David P. Yee, Judith Bayard Cushing, Tim Hunkapiller, Elizabeth Kutter:
Overview: A System for Tracking and Managing the Results from Sequence Comparison Programs. Pattern Discovery in Biomolecular Data 1999: 160-182
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Bruce A. Shapiro, Wojciech Kasprzak, Jin Chu Wu, Kathleen M. Currey:
RNA Structure Analysis: A Multifaceted Approach. Pattern Discovery in Biomolecular Data 1999: 183-215

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