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Neri Niccolai
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2020 – today
- 2024
- [j8]Sara Marziali
, Giacomo Nunziati
SADIC v2: A modern implementation of the Simple Atom Depth Index Calculator. SoftwareX 27: 101803 (2024) - [c1]Sara Marziali
A Discrete Geometry Method for Atom Depth Computation in Complex Molecular Systems. DGMM 2024: 443-455 - 2022
- [j7]Pietro Bongini
Structural Bioinformatic Survey of Protein-Small Molecule Interfaces Delineates the Role of Glycine in Surface Pocket Formation. IEEE ACM Trans. Comput. Biol. Bioinform. 19(3): 1881-1886 (2022) - 2021
- [j6]Pietro Bongini
Structural bioinformatics survey on disease-inducing missense mutations. J. Bioinform. Comput. Biol. 19(3): 2150008:1-2150008:15 (2021) - 2020
- [j5]Anna Visibelli
A deep attention network for predicting amino acid signals in the formation of α-helices. J. Bioinform. Comput. Biol. 18(5): 2050028:1-2050028:17 (2020)
2010 – 2019
- 2019
- [j4]Pietro Bongini
Glycine-induced formation and druggability score prediction of protein surface pockets. J. Bioinform. Comput. Biol. 17(5): 1950026:1-1950026:18 (2019) - 2017
- [j3]Andrea Bernini
Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: Application to the homogentisate 1, 2-dioxygenase mutants at the base of rare disease Alkaptonuria. Comput. Biol. Chem. 70: 133-141 (2017) - 2013
- [j2]Silvia Bottini, Andrea Bernini
ProCoCoA: A quantitative approach for analyzing protein core composition. Comput. Biol. Chem. 43: 29-34 (2013)
2000 – 2009
- 2005
- [j1]Daniele Varrazzo, Andrea Bernini
Three-dimensional computation of atom depth in complex molecular structures. Bioinform. 21(12): 2856-2860 (2005)
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