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Artemis G. Hatzigeorgiou
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2020 – today
- 2024
- [c18]Stefanos Digenis, Dimitris Grigoriadis, Marios Miliotis, Artemis G. Hatzigeorgiou:
A Machine Learning algorithm for Predicting Translation Initiation Start Positions. CIBCB 2024: 1-5 - [c17]Steve Stavropoulos, Elissavet Zacharopoulou, Spiros V. Georgakopoulos, Sotiris K. Tasoulis, Vassilis P. Plagianakos, Artemis G. Hatzigeorgiou:
Leveraging Large Language Models for Information Extraction: Identifying microRNA - Gene Interactions in Biomedical Literature. CIBCB 2024: 1-7 - 2023
- [j36]Spyros Tastsoglou, Athanasios Alexiou, Dimitra Karagkouni, Giorgos Skoufos, Elissavet Zacharopoulou, Artemis G. Hatzigeorgiou
:
DIANA-microT 2023: including predicted targets of virally encoded miRNAs. Nucleic Acids Res. 51(W1): 148-153 (2023) - [j35]Spyros Tastsoglou, Giorgos Skoufos, Marios Miliotis, Dimitra Karagkouni, Ioannis Koutsoukos, Anna Karavangeli, Filippos S. Kardaras, Artemis G. Hatzigeorgiou
DIANA-miRPath v4.0: expanding target-based miRNA functional analysis in cell-type and tissue contexts. Nucleic Acids Res. 51(W1): 154-159 (2023) - 2022
- [j34]Dimitris Grigoriadis
DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data. BMC Bioinform. 23-S(2): 395 (2022) - [j33]Ioannis Kavakiotis, Athanasios Alexiou, Spyros Tastsoglou
DIANA-miTED: a microRNA tissue expression database. Nucleic Acids Res. 50(D1): 1055-1061 (2022) - 2021
- [j32]Giorgos Skoufos
Peryton: a manual collection of experimentally supported microbe-disease associations. Nucleic Acids Res. 49(Database-Issue): D1328-D1333 (2021) - [j31]Nikos Perdikopanis
DIANA-miRGen v4: indexing promoters and regulators for more than 1500 microRNAs. Nucleic Acids Res. 49(Database-Issue): D151-D159 (2021) - [j30]Blake A. Sweeney
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Res. 49(Database-Issue): D212-D220 (2021) - 2020
- [j29]Dimitra Karagkouni, Maria D. Paraskevopoulou, Spyros Tastsoglou
DIANA-LncBase v3: indexing experimentally supported miRNA targets on non-coding transcripts. Nucleic Acids Res. 48(Database-Issue): D101-D110 (2020) - [c16]Dimitris Grigoriadis, Nikos Perdikopanis
DiS-TSS: An Annotation Agnostic Algorithm for TSS Identification. IWBBIO 2020: 613-623
2010 – 2019
- 2018
- [j28]Artemis G. Hatzigeorgiou, Pantelis G. Bagos, Panayiotis V. Benos
ECCB 2018: The 17th European Conference on Computational Biology. Bioinform. 34(17): i595-i598 (2018) - [j27]Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos
DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions. Nucleic Acids Res. 46(Database-Issue): D239-D245 (2018) - 2016
- [j26]Georgios K. Georgakilas
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. Nucleic Acids Res. 44(Database-Issue): 190-195 (2016) - [j25]Maria D. Paraskevopoulou, Ioannis S. Vlachos
DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts. Nucleic Acids Res. 44(Database-Issue): 231-238 (2016) - [j24]Ioannis S. Vlachos, Thanasis Vergoulis
DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data. Nucleic Acids Res. 44(Webserver-Issue): W128-W134 (2016) - 2015
- [j23]Thanasis Vergoulis
mirPub: a database for searching microRNA publications. Bioinform. 31(9): 1502-1504 (2015) - [j22]Ioannis S. Vlachos
DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA: mRNA interactions. Nucleic Acids Res. 43(Database-Issue): 153-159 (2015) - [j21]Ioannis S. Vlachos
DIANA-miRPath v3.0: deciphering microRNA function with experimental support. Nucleic Acids Res. 43(Webserver-Issue): W460-W466 (2015) - [c15]Ilias Kanellos
MirPub v2: Towards Ranking and Refining miRNA Publication Search Results. TPDL 2015: 355-359 - [c14]Rodothea-Myrsini Tsoupidi
TarMiner: automatic extraction of miRNA targets from literature. SSDBM 2015: 12:1-12:5 - 2014
- [c13]Ilias Kanellos
MR-microT: a MapReduce-based MicroRNA target prediction method. SSDBM 2014: 47:1-47:4 - [c12]Katerina Gkirtzou, Thanasis Vergoulis, Artemis G. Hatzigeorgiou, Timos K. Sellis, Theodore Dalamagas:
Publishing Diachronic Life Science Linked Data. SWAT4LS 2014 - 2013
- [j20]Maria D. Paraskevopoulou, Georgios K. Georgakilas
DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. Nucleic Acids Res. 41(Database-Issue): 239-245 (2013) - [j19]Maria D. Paraskevopoulou, Georgios K. Georgakilas
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows. Nucleic Acids Res. 41(Webserver-Issue): 169-173 (2013) - 2012
- [j18]Martin Reczko
Functional microRNA targets in protein coding sequences. Bioinform. 28(6): 771-776 (2012) - [j17]Thanasis Vergoulis
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support. Nucleic Acids Res. 40(Database-Issue): 222-229 (2012) - [j16]Ioannis S. Vlachos
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways. Nucleic Acids Res. 40(Web-Server-Issue): 498-504 (2012) - [c11]Thanasis Vergoulis
TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction. SSDBM 2012: 628-633 - [c10]Theodore Dalamagas
Publishing life science data as linked open data: the case study of miRBase. WOD 2012: 70-77 - [i2]Theodore Dalamagas, Nikos Bikakis, George Papastefanatos, Yannis Stavrakas, Artemis G. Hatzigeorgiou:
Publishing Life Science Data as Linked Open Data: the Case Study of miRBase. CoRR abs/1205.2320 (2012) - 2011
- [j15]Manolis Maragkakis
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association. Nucleic Acids Res. 39(Web-Server-Issue): 145-148 (2011) - 2010
- [j14]Panagiotis Alexiou
miRGen 2.0: a database of microRNA genomic information and regulation. Nucleic Acids Res. 38(Database-Issue): 137-141 (2010) - [c9]Jan Grau, Daniel Arend, Ivo Grosse, Artemis G. Hatzigeorgiou, Jens Keilwagen, Manolis Maragkakis, Claus Weinholdt, Stefan Posch:
Predicting miRNA targets utilizing an Extended Profile HMM. GCB 2010: 81-91 - [c8]Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou:
FreePub: Collecting and Organizing Scientific Material Using Mindmaps. SWAT4LS 2010 - [i1]Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou:
FreePub: Collecting and Organizing Scientific Material Using Mindmaps. CoRR abs/1012.1623 (2010)
2000 – 2009
- 2009
- [j13]Giorgos L. Papadopoulos
DIANA-mirPath: Integrating human and mouse microRNAs in pathways. Bioinform. 25(15): 1991-1993 (2009) - [j12]Panagiotis Alexiou
Lost in translation: an assessment and perspective for computational microRNA target identification. Bioinform. 25(23): 3049-3055 (2009) - [j11]Manolis Maragkakis
Accurate microRNA target prediction correlates with protein repression levels. BMC Bioinform. 10: 295 (2009) - [j10]Giorgos L. Papadopoulos
The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res. 37(Database-Issue): 155-158 (2009) - [j9]Manolis Maragkakis
DIANA-microT web server: elucidating microRNA functions through target prediction. Nucleic Acids Res. 37(Web-Server-Issue): 273-276 (2009) - 2007
- [j8]Molly Megraw
miRGen: a database for the study of animal microRNA genomic organization and function. Nucleic Acids Res. 35(Database-Issue): 149-155 (2007) - [j7]Axel Bernal, Koby Crammer, Artemis G. Hatzigeorgiou, Fernando Pereira:
Global Discriminative Learning for Higher-Accuracy Computational Gene Prediction. PLoS Comput. Biol. 3(3) (2007) - 2006
- [c7]Hanno Hinsch, Artemis G. Hatzigeorgiou:
Simple Methods of Finding Short Protein Coding Sequences. BIOCOMP 2006: 17-23 - [c6]Karol Szafranski, Molly Megraw, Martin Reczko, Artemis G. Hatzigeorgiou:
Support Vector Machines for Predicting microRNA Hairpins. BIOCOMP 2006: 270-276 - 2005
- [c5]Praveen Sethupathy, Molly Megraw
Computational Identification of Regulatory Factors Involved in MicroRNA Transcription. Panhellenic Conference on Informatics 2005: 457-468 - 2002
- [j6]Artemis G. Hatzigeorgiou:
Translation initiation start prediction in human cDNAs with high accuracy. Bioinform. 18(2): 343-350 (2002) - [j5]Vladimir B. Bajic, Suisheng Tang, Hao Han, Vladimir Brusic, Artemis G. Hatzigeorgiou:
Artificial Neural Networks Based Systems for Recognition of Genomic Signals and Regions: A Review. Informatica (Slovenia) 26(4) (2002) - [c4]Martin Reczko, Petko Fiziev, Eike Staub, Artemis G. Hatzigeorgiou:
Finding Signal Peptides in Human Protein Sequences Using Recurrent Neural Networks. WABI 2002: 60-67 - 2001
- [j4]Artemis G. Hatzigeorgiou, Petko Fiziev, Martin Reczko
DIANA-EST: a statistical analysis. Bioinform. 17(10): 913-919 (2001) - 2000
- [j3]Christian Derst, Martin Reczko, Artemis G. Hatzigeorgiou:
Prediction of human transnational initiation sites using a multiple neural network approach. Int. J. Comput. Syst. Signals 1(2): 169-179 (2000) - [c3]Artemis G. Hatzigeorgiou:
Translation Initiation Site Prediction in Eucariotic MRNAs with High Accuracy. German Conference on Bioinformatics 2000: 35-44
1990 – 1999
- 1999
- [c2]Artemis G. Hatzigeorgiou, Martin Reczko:
Feature recognition on expressed sequence tags of human DNA. IJCNN 1999: 3490-3493 - 1996
- [j2]Philipp Bucher, James W. Fickett, Artemis G. Hatzigeorgiou:
Computational analysis of transcriptional regulatory elements: a field in flux. Comput. Appl. Biosci. 12(5): 361-362 (1996) - [c1]Niels Mache, Paul Levi, Artemis G. Hatzigeorgiou, Martin Reczko:
Detection of Eukaryotic POL II Promoters with Multi-State Time-Delay Neural Networks. German Conference on Bioinformatics 1996: 264-267 - 1995
- [j1]Martin Reczko, Artemis G. Hatzigeorgiou, Niels Mache, Andreas Zell, Sándor Suhai:
A parallel neural network simulator on the connection machine CM-5. Comput. Appl. Biosci. 11(3): 309-315 (1995)
Coauthor Index
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last updated on 2024-10-23 20:33 CEST by the dblp team
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