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Simin He 0001
Person information
- affiliation: Chinese Academy of Sciences (CAS), Key Lab of Intelligent Information Processing, Beijing, China
Other persons with the same name
- Simin He — disambiguation page
- Simin He 0002 — Wuhan University of Technology, School of Information Engineering, China
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Journal Articles
- 2019
- [j15]Hao Yang, Hao Chi, Wen-Feng Zeng, Wen-Jing Zhou
, Si-Min He:
pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework. Bioinform. 35(14): i183-i190 (2019) - 2015
- [j14]Kun Zhang, Yan Fu, Wen-Feng Zeng, Kun He, Hao Chi, Chao Liu, Yan-Chang Li, Yuan Gao, Ping Xu, Si-Min He:
A note on the false discovery rate of novel peptides in proteogenomics. Bioinform. 31(20): 3249-3253 (2015) - 2010
- [j13]Ding Ye, Yan Fu, Ruixiang Sun, Haipeng Wang, Zuofei Yuan
Open MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate. Bioinform. 26(12): 399-406 (2010) - [j12]Chen Zhou, Hao Chi, Leheng Wang, You Li, Yan-Jie Wu, Yan Fu, Ruixiang Sun, Si-Min He:
Speeding up tandem mass spectrometry-based database searching by longest common prefix. BMC Bioinform. 11: 577 (2010) - 2009
- [j11]Yan Fu, Wei Jia, Zhuang Lu, Haipeng Wang, Zuofei Yuan
Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences. BMC Bioinform. 10(S-1) (2009) - 2008
- [j10]Xiang Chen, Simin He, Dongbo Bu, Fa Zhang, Zhiyong Wang, Runsheng Chen
FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space. Bioinform. 24(18): 1994-2001 (2008) - [j9]Simin He, Shutao Sun, Hong-Tao Guan, Qiang Zheng, Youjian Zhao, Wen Gao:
On guaranteed smooth switching for buffered crossbar switches. IEEE/ACM Trans. Netw. 16(3): 718-731 (2008) - 2006
- [j8]Dequan Li, Wen Gao, Charles X. Ling, Xiaobiao Wang, Ruixiang Sun, Simin He:
IndexToolkit: an open source toolbox to index protein databases for high-throughput proteomics. Bioinform. 22(20): 2572-2573 (2006) - [j7]Shutao Sun, Simin He, Wen Gao:
Throughput analysis of a buffered crossbar switch with multiple input queues under burst traffic. IEEE Commun. Lett. 10(4): 305-307 (2006) - 2005
- [j6]Dequan Li, Yan Fu, Ruixiang Sun, Charles X. Ling, Yonggang Wei, Hu Zhou, Rong Zeng, Qiang Yang, Simin He, Wen Gao:
pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry. Bioinform. 21(13): 3049-3050 (2005) - [j5]Kui Gao, Wen Gao, Simin He, Yuan Zhang:
Real-time smoothing for network adaptive video streaming. J. Vis. Commun. Image Represent. 16(4-5): 512-526 (2005) - [j4]Jingfen Zhang, Wen Gao, Jinjin Cai, Simin He, Rong Zeng, Runsheng Chen:
Predicting Molecular Formulas of Fragment Ions with Isotope Patterns in Tandem Mass Spectra. IEEE ACM Trans. Comput. Biol. Bioinform. 2(3): 217-230 (2005) - 2004
- [j3]Kui Gao, Wen Gao, Simin He, Yuan Zhang:
Real-time scheduling based on imprecise computation for scalable streaming media system over the Internet. Real Time Imaging 10(5): 307-313 (2004) - [j2]Yan Fu, Ruixiang Sun, Qiang Yang, Simin He, Chunli Wang, Haipeng Wang, Shiguang Shan, Junfa Liu, Wen Gao:
A block-based support vector machine approach to the protein homology prediction task in KDD Cup 2004. SIGKDD Explor. 6(2): 120-124 (2004) - 1999
- [j1]Simin He, Bo Zhang:
Solving SAT by algorithm transform of Wu's method. J. Comput. Sci. Technol. 14(5): 468-480 (1999)
Conference and Workshop Papers
- 2012
- [c17]Wenli Zhang, Hao Chi, Yuanzheng Lu, Yuqing Huang, Xiaofang Zhao, Simin He:
Preliminary Search Engine for Open Protein Identification. PDCAT 2012: 410-415 - 2007
- [c16]Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, Wen Gao:
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots. BIBE 2007: 411-417 - [c15]Yi Wang, Simin He, Youjian Zhao, Qiang Zheng, Wen Gao:
Practical Algorithms of Bandwidth Regulation for Rate-Based Switching. GLOBECOM 2007: 2483-2487 - [c14]Yan Fu, Wen Gao, Simin He, Ruixiang Sun, Hu Zhou, Rong Zeng:
Mining Tandem Mass Spectral Data to Develop a More Accurate Mass Error Model for Peptide Identification. Pacific Symposium on Biocomputing 2007: 421-432 - 2006
- [c13]Qiang Zheng, Simin He, Shutao Sun, Yanfeng Zheng, Wen Gao:
Switch Simulations Based on Workload Pattern Generation and Smoothed Periodic Input. ICCCN 2006: 163-168 - [c12]Haipeng Wang, Yan Fu, Ruixiang Sun, Simin He, Rong Zeng, Wen Gao:
An SVM Scorer for More Sensitive and Reliable Peptide Identification via Tandem Mass Spectrometry. Pacific Symposium on Biocomputing 2006: 303-314 - 2005
- [c11]Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao:
Scheduling Algorithms for Input Queued Switches Using Local Search Technique. ICN (1) 2005: 865-872 - [c10]Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao:
Parallelized scheduling algorithm for input queued switches using local search technique. IPCCC 2005: 43-48 - [c9]Simin He, Shutao Sun, Wei Zhao, Yanfeng Zheng, Wen Gao:
Smooth switching problem in buffered crossbar switches. SIGMETRICS 2005: 386-387 - 2004
- [c8]Shutao Sun, Youjian Zhao, Simin He, Yanfeng Zheng, Wen Gao:
Distributed load adaptive scheduling for high speed input queued switch. GLOBECOM 2004: 1197-1201 - [c7]Shutao Sun, Simin He, Yanfeng Zheng, Wen Gao:
Multiple-threshold based scheduling algorithm for high performance input queued switches. ICON 2004: 755-759 - [c6]Yan Fu, Qiang Yang, Charles X. Ling, Haipeng Wang, Dequan Li, Ruixiang Sun, Hu Zhou, Rong Zeng, Yiqiang Chen, Simin He, Wen Gao:
A Kernel-Based Case Retrieval Algorithm with Application to Bioinformatics. PRICAI 2004: 544-553 - [c5]Kui Gao, Wen Gao, Simin He, Yuan Zhang:
Online smoothing for scalable media stream delivery. VCIP 2004 - 2003
- [c4]Kui Gao, Wen Gao, Simin He, Peng Gao, Yuan Zhang:
Real-time scheduling on scalable media stream delivery. ISCAS (2) 2003: 824-827 - [c3]Shutao Sun, Simin He, Wen Gao, Bin Pang:
Multiscale load adaptive scheduling for energy efficient transmission over wireless networks. PIMRC 2003: 275-279 - [c2]Kui Gao, Yuan Zhang, Wen Gao, Simin He:
Real-time scheduling supporting VCR functionality for scalable video streaming. PIMRC 2003: 2711-2715 - [c1]Kui Gao, Wen Gao, Simin He, Yuan Zhang:
Real-time scheduling and online resource allocation on scalable streaming media server. VCIP 2003: 544-551
Coauthor Index
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