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Gautier Stoll
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2020 – today
- 2021
- [j9]Anna Niarakis, Martin Kuiper, Marek Ostaszewski, Rahuman S. Malik-Sheriff, Cristina Casals-Casas, Denis Thieffry, Tom C. Freeman, Paul D. Thomas, Vasundra Touré, Vincent Noël, Gautier Stoll, Julio Saez-Rodriguez, Aurélien Naldi, Eugenia Oshurko, Ioannis Xenarios, Sylvain Soliman, Claudine Chaouiya, Tomás Helikar, Laurence Calzone:
Setting the basis of best practices and standards for curation and annotation of logical models in biology - highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop. Briefings Bioinform. 22(2): 1848-1859 (2021)
2010 – 2019
- 2019
- [j8]Gaëlle Letort, Arnau Montagud, Gautier Stoll, Randy W. Heiland, Emmanuel Barillot, Paul Macklin, Andrei Yu. Zinovyev, Laurence Calzone:
PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling. Bioinform. 35(7): 1188-1196 (2019) - 2017
- [j7]Gautier Stoll, Barthélémy Caron, Eric Viara, Aurélien Dugourd, Andrei Yu. Zinovyev, Aurélien Naldi, Guido Kroemer, Emmanuel Barillot, Laurence Calzone:
MaBoSS 2.0: an environment for stochastic Boolean modeling. Bioinform. 33(14): 2226-2228 (2017) - 2013
- [j6]Eric Bonnet, Laurence Calzone, Daniel Rovera, Gautier Stoll, Emmanuel Barillot, Andrei Yu. Zinovyev:
BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats. BMC Syst. Biol. 7: 18 (2013) - 2012
- [j5]Gautier Stoll, Eric Viara, Emmanuel Barillot, Laurence Calzone:
Continuous time boolean modeling for biological signaling: application of Gillespie algorithm. BMC Syst. Biol. 6: 116 (2012) - 2011
- [j4]Carito Guziolowski, Sylvain Blachon, Tatiana Baumuratova, Gautier Stoll, Ovidiu Radulescu, Anne Siegel:
Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling. IEEE ACM Trans. Comput. Biol. Bioinform. 8(5): 1223-1234 (2011) - 2010
- [j3]Gautier Stoll, Mirko Bischofberger, Jacques Rougemont, Felix Naef:
Stabilizing patterning in the Drosophila segment polarity network by selecting models in silico. Biosyst. 102(1): 3-10 (2010) - [j2]Tatiana Baumuratova, Didier Surdez, Bernard Delyon, Gautier Stoll, Olivier Delattre, Ovidiu Radulescu, Anne Siegel:
Localizing potentially active post-transcriptional regulations in the Ewing's sarcoma gene regulatory network. BMC Syst. Biol. 4: 146 (2010)
2000 – 2009
- 2009
- [c1]Sylvain Blachon, Gautier Stoll, Carito Guziolowski, Andrei Yu. Zinovyev, Emmanuel Barillot, Anne Siegel, Ovidiu Radulescu:
Method for Relating Inter-patient Gene Copy Numbers Variations with Gene Expression via Gene Influence Networks. AIAI Workshops 2009: 72-87 - 2006
- [j1]Gautier Stoll, Jacques Rougemont, Felix Naef:
Few crucial links assure checkpoint efficiency in the yeast cell-cycle network. Bioinform. 22(20): 2539-2546 (2006)
Coauthor Index
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