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SWAT4LS 2010: Berlin, Germany
- Albert Burger, M. Scott Marshall, Paolo Romano, Adrian Paschke, Andrea Splendiani:
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, Berlin, Germany, December 10, 2010. CEUR Workshop Proceedings 698, CEUR-WS.org 2011
Papers
- Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer:
Analysis of Cancer Omics Data In A Semantic Web Framework. - Anna-Lena Lamprecht, Stefan Naujokat, Bernhard Steffen, Tiziana Margaria:
Constraint-Guided Workflow Composition Based on the EDAM Ontology. - Rafael Berlanga Llavori, Ernesto Jiménez-Ruiz, Victoria Nebot:
Building Conceptual Spaces for Exploring and Linking Biomedical Resources. - Adrian Paschke, Zhili Zhao:
Process Makna - A Semantic Wiki for Scientific Workflows. - Kenneth McLeod, Gus Ferguson, Albert Burger:
Argudas: Arguing with Gene Expression Information. - Samuel Croset, Christoph Grabmüller, Chen Li, Silvestras Kavaliauskas, Dietrich Rebholz-Schuhmann:
The CALBC RDF Triple Store: Retrieval over Large Literature Content. - Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft:
Populous: A Tool for Populating Templates for OWL Ontologies. - Sylvie Ranwez, Vincent Ranwez, Mohameth-François Sy, Jacky Montmain, Michel Crampes:
User Centered and Ontology Based Information Retrieval System for Life Sciences. - Alejandra N. González-Beltrán, Ben Tagger, Anthony Finkelstein:
Ontology-based Queries over Cancer Data. - Abdelaali Briache, Kamar Marrakchi, Amine Kerzazi, Ismael Navas-Delgado, José Francisco Aldana Montes, Badr Din Rossi Hassani, Khalid Lairini:
YeastMed: an XML-Based System for Biological Data Integration of Yeast. - Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou:
FreePub: Collecting and Organizing Scientific Material Using Mindmaps. - Vladimir Mironov, Nirmala Seethappan, Ward Blondé, Erick Antezana, Bjorn Lindi, Martin Kuiper:
Benchmarking Triple Stores with Biological Data. - Jasmin Opitz, Bijan Parsia, Ulrike Sattler:
Evaluating Modelling Approaches for Medical Image Annotations.
Demos
- Adianto Wibisono, Marco Roos, M. Scott Marshall:
The AIDA Toolkit - a Tool for Users and Developers. - Catherine Canevet, Artem Lysenko, Andrea Splendiani, Matthew R. Pocock, Christopher J. Rawlings:
Analysis and Visualisation of RDF Resources in Ondex. - Richard Huber, Kirsten Hantelmann, Alexandru Todor, Sebastian Krebs, Ralf Heese, Adrian Paschke:
Use of Semantic Technologies for the Development of a Dynamic Trajectories Generator in a Semantic Chemistry eLearning Platform. - E. Luke McCarthy, Benjamin P. Vandervalk, Mark D. Wilkinson:
SPARQL Assist Language-Neutral Query Composer.
Posters
- Paul Boekschoten, Kees Burger, Barend Mons, Christine Chichester:
Import of ENZYME Data into the ConceptWiki and its Representation as RDF. - Adrian Groza, Radu Balaj:
Using Semantic Wikis for Structured Argument in Medical Domain. - Ernesto Jiménez-Ruiz, Bernardo Cuenca Grau, Rafael Berlanga Llavori, Dietrich Rebholz-Schuhmann:
First Steps in the Logic-based Assessment of Post-composed Phenotypic Descriptions. - Jerven T. Bolleman, Alain Gateau, Sebastien Gehant, Nicole Redaschi:
Provenance and Evidence in UniProtKB. - Julia Dmitrieva, Fons J. Verbeek:
Creating a new Ontology: a Modular Approach. - Halit Erdogan, Umut Öztok, Yelda Erdem, Esra Erdem:
Querying Biomedical Ontologies in Natural Language using Answer Set Programming. - Douglas G. Howe, Christian Pich:
Ontology Usage at ZFIN. - Adrian Paschke, Zhili Zhao:
Rule Responder: A Rule-Based Semantic eScience Service Infrastructure. - Ning Kang, Rogier Barendse, Zubair Afzal, Bharat Singh, Martijn J. Schuemie, Erik M. van Mulligen, Jan A. Kors:
A Concept Annotation System for Clinical Records. - Iker Huerga, Ainhoa Serna, Jon Kepa Gerrikagoitia:
Fundamentals of Semantic Web Technologies in Medical Environments: A Case in Breast Cancer Risk Estimation. - Maria Rüther, Thomas Bandholtz, Antoine Logean:
Linked Environment Data for the Life Sciences. - Pablo López-García:
Are SNOMED CT Browsers Ready for Institutions? Introducing MySNOM. - María Pérez Catalán, Rafael Berlanga Llavori, Ismael Sanz:
A Semantic Approach for the Requirement-driven Discovery of Web Services in the Life Sciences. - Pedro Almeida, Paulo Gomes, Francisco Sales, Ana Nogueira, António Dourado:
Ontology and Knowledge Management System on Epilepsy and Epileptic Seizures. - Alexandru Todor, Adrian Paschke, Stephan Heineke:
ChemCloud: Chemical e-Science Information Cloud. - Falko Krause, Marvin Schulz, Timo Lubitz, Wolfram Liebermeister:
semanticsSBML 2.0 - A Collection of Online Services for SBML Models. - He Tan:
A Study on the Relation between Linguistics-oriented and Domain-specific Semantics. - Éric Leclercq, Marinette Savonnet:
Scientific Collaborations: Principles of WikiBridge Design.
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