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13. RECOMB 2009: Tucson, AZ, USA
- Serafim Batzoglou:
Research in Computational Molecular Biology, 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings. Lecture Notes in Computer Science 5541, Springer 2009, ISBN 978-3-642-02007-0 - Tetsuo Shibuya:
Searching Protein 3-D Structures in Linear Time. 1-15 - Zengyou He
, Chao Yang, Can Yang, Robert Z. Qi
Optimization-Based Peptide Mass Fingerprinting for Protein Mixture Identification. 16-30 - Jian Peng, Jinbo Xu:
Boosting Protein Threading Accuracy. 31-45 - Cédric Chauve, Nadia El-Mabrouk:
New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees. 46-58 - Feng Zhao, Jian Peng, Joe DeBartolo, Karl F. Freed, Tobin R. Sosnick, Jinbo Xu:
A Probabilistic Graphical Model for Ab Initio Folding. 59-73 - Sharon Bruckner, Falk Hüffner
Topology-Free Querying of Protein Interaction Networks. 74-89 - Yong Lu, Roni Rosenfeld
Cross Species Expression Analysis of Innate Immune Response. 90-107 - Bonnie Kirkpatrick, Javier Rosa, Eran Halperin, Richard M. Karp:
Haplotype Inference in Complex Pedigrees. 108-120 - Veli Mäkinen
Storage and Retrieval of Individual Genomes. 121-137 - Arvind Ramanathan, Pratul K. Agarwal
An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations. 138-154 - Alexandre Donzé, Gilles Clermont, Axel Legay, Christopher James Langmead
Parameter Synthesis in Nonlinear Dynamical Systems: Application to Systems Biology. 155-169 - Rami Jaschek, Amos Tanay:
Spatial Clustering of Multivariate Genomic and Epigenomic Information. 170-183 - Nicholas D. Pattengale, Masoud Alipour, Olaf R. P. Bininda-Emonds, Bernard M. E. Moret
How Many Bootstrap Replicates Are Necessary? 184-200 - Oliver Stegle, Katherine J. Denby, David L. Wild, Zoubin Ghahramani, Karsten M. Borgwardt:
A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series. 201-216 - Tali Raveh-Sadka, Michal Levo, Eran Segal
Incorporating Nucleosomes into Thermodynamic Models of Transcription Regulation. 217 - Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp:
Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. 218-219 - Ali Bashir, Qing Lu, Dennis Carson, Benjamin J. Raphael, Yu-Tsueng Liu, Vineet Bafna
Optimizing PCR Assays for DNA Based Cancer Diagnostics. 220-235 - Dan Gusfield:
The Multi-State Perfect Phylogeny Problem with Missing and Removable Data: Solutions via Integer-Programming and Chordal Graph Theory. 236-252 - Xiang Zhang, Feng Pan, Yuying Xie, Fei Zou, Wei Wang
COE: A General Approach for Efficient Genome-Wide Two-Locus Epistasis Test in Disease Association Study. 253-269 - Snehit Prabhu, Itsik Pe'er:
Overlapping Pools for High Throughput Targeted Resequencing. 270 - Osvaldo Zagordi
Deep Sequencing of a Genetically Heterogeneous Sample: Local Haplotype Reconstruction and Read Error Correction. 271-284 - Mathias Möhl, Sebastian Will, Rolf Backofen:
Lifting Prediction to Alignment of RNA Pseudoknots. 285-301 - Mathieu Lavallée-Adam
Detection of Locally Over-Represented GO Terms in Protein-Protein Interaction Networks. 302-320 - Wei Zheng, Karl E. Griswold
Protein Fragment Swapping: A Method for Asymmetric, Selective Site-Directed Recombination. 321-338 - Jérôme Waldispühl
Simultaneous Alignment and Folding of Protein Sequences. 339-355 - Banu Dost, Nuno Bandeira, Xiangqian Li, Zhouxin Shen, Steve Briggs, Vineet Bafna
Shared Peptides in Mass Spectrometry Based Protein Quantification. 356-371 - Benjamin J. Hescott, Mark D. M. Leiserson, Lenore Cowen, Donna K. Slonim:
Evaluating Between-Pathway Models with Expression Data. 372-385 - Krister M. Swenson, Vaibhav Rajan
Sorting Signed Permutations by Inversions in O(nlogn) Time. 386-399 - Saket Navlakha, James Robert White, Niranjan Nagarajan
Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information. 400-417 - Suzanne S. Sindi, Benjamin J. Raphael:
Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data. 418-433 - Sheila M. Reynolds, Jeff A. Bilmes, William Stafford Noble:
On the Relationship between DNA Periodicity and Local Chromatin Structure. 434-450 - Constantinos Daskalakis, Elchanan Mossel
Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep. 451-465 - Eun Yong Kang, Ilya Shpitser
Detecting the Presence and Absence of Causal Relationships between Expression of Yeast Genes with Very Few Samples. 466-481 - Hyun Min Kang, Noah Zaitlen, Buhm Han, Eleazar Eskin:
An Adaptive and Memory Efficient Algorithm for Genotype Imputation. 482-495 - Itai Sharon
A Statistical Framework for the Functional Analysis of Metagenomes. 496-511 - Eagu Kim, Travis J. Wheeler, John D. Kececioglu:
Learning Models for Aligning Protein Sequences with Predicted Secondary Structure. 512-531
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